View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9308_low_59 (Length: 247)
Name: NF9308_low_59
Description: NF9308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9308_low_59 |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 16960571 - 16960330
Alignment:
| Q |
1 |
agataaataatgaagagaaagtgaaaagtactgcaaggtctatagtggagtatttcagcagaagggttcctgataaaaatgtcatgaaaaatctgacaag |
100 |
Q |
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| T |
16960571 |
agataaataatgaagagaaagtgaaaagtactgcaaggtctatagtggagtatttcagcagatgggttcctgataaaaatgtcatgaaaaatctgacaag |
16960472 |
T |
|
| Q |
101 |
atccataaaggaacatataacgagccgattcaataacagacgccttgtgagggcgccttcgaggtccataatagaacatgtatcatcagtaaacactgca |
200 |
Q |
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|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |
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| T |
16960471 |
atccataaagaaacatataatgagccgattcaataacagacgccttgtgagggcgccttcaaggtccataatagaacatgtatcatcattaaacactgca |
16960372 |
T |
|
| Q |
201 |
aaactactcactgatgcaagtaaatccacaaatcctatgctt |
242 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||| |
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| T |
16960371 |
aaactactcactgatgcaagtaaatccacaaatcctttgctt |
16960330 |
T |
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