View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9308_low_75 (Length: 239)

Name: NF9308_low_75
Description: NF9308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9308_low_75
NF9308_low_75
[»] chr8 (35 HSPs)
chr8 (57-239)||(13225003-13225185)
chr8 (55-237)||(19176287-19176469)
chr8 (61-239)||(12572215-12572393)
chr8 (58-239)||(41681498-41681679)
chr8 (61-237)||(9928912-9929088)
chr8 (57-239)||(11656821-11657003)
chr8 (60-239)||(33328504-33328683)
chr8 (57-239)||(44831246-44831428)
chr8 (59-230)||(31133593-31133764)
chr8 (54-239)||(33742918-33743102)
chr8 (54-209)||(34540942-34541097)
chr8 (52-221)||(19176673-19176841)
chr8 (56-218)||(41681132-41681292)
chr8 (54-221)||(11656451-11656618)
chr8 (53-221)||(12571858-12572026)
chr8 (56-209)||(4629795-4629948)
chr8 (56-221)||(31133218-31133382)
chr8 (57-221)||(9930040-9930203)
chr8 (61-221)||(33328161-33328320)
chr8 (55-221)||(44831628-44831793)
chr8 (48-221)||(13224631-13224802)
chr8 (58-167)||(9178071-9178180)
chr8 (56-166)||(11336959-11337069)
chr8 (57-170)||(8073985-8074097)
chr8 (110-221)||(33743302-33743412)
chr8 (150-239)||(9177724-9177813)
chr8 (52-221)||(4630175-4630337)
chr8 (54-167)||(10918122-10918235)
chr8 (57-98)||(10919691-10919732)
chr8 (137-174)||(43958264-43958301)
chr8 (52-103)||(43958203-43958254)
chr8 (55-219)||(35427198-35427361)
chr8 (56-91)||(9177665-9177700)
chr8 (163-221)||(18805267-18805324)
chr8 (54-103)||(6115612-6115661)
[»] chr7 (31 HSPs)
chr7 (54-239)||(19590889-19591074)
chr7 (54-239)||(37787131-37787316)
chr7 (54-239)||(38859005-38859190)
chr7 (56-239)||(32004612-32004795)
chr7 (56-235)||(2658837-2659016)
chr7 (58-239)||(35288903-35289084)
chr7 (57-239)||(19830784-19830965)
chr7 (61-230)||(4641817-4641983)
chr7 (56-239)||(34533789-34533972)
chr7 (71-236)||(29099863-29100028)
chr7 (55-239)||(23952727-23952912)
chr7 (56-221)||(19830418-19830582)
chr7 (57-221)||(37786766-37786929)
chr7 (58-221)||(19590525-19590687)
chr7 (56-221)||(34534174-34534338)
chr7 (53-221)||(32004997-32005164)
chr7 (57-221)||(38858642-38858805)
chr7 (56-170)||(35289334-35289448)
chr7 (55-221)||(2659223-2659388)
chr7 (52-174)||(38160945-38161067)
chr7 (61-221)||(29100234-29100393)
chr7 (61-221)||(4641443-4641602)
chr7 (71-221)||(23953112-23953261)
chr7 (56-170)||(4478133-4478247)
chr7 (56-174)||(28583437-28583555)
chr7 (59-170)||(28584355-28584466)
chr7 (157-239)||(4477800-4477882)
chr7 (146-221)||(35578986-35579060)
chr7 (60-219)||(9181534-9181692)
chr7 (60-218)||(9393738-9393894)
chr7 (57-197)||(49064033-49064171)
[»] chr4 (62 HSPs)
chr4 (58-239)||(46193405-46193586)
chr4 (55-239)||(23494807-23494991)
chr4 (58-239)||(22434179-22434360)
chr4 (58-239)||(45082788-45082969)
chr4 (56-239)||(15523233-15523416)
chr4 (58-239)||(12234693-12234874)
chr4 (56-237)||(54995067-54995248)
chr4 (55-239)||(20470875-20471059)
chr4 (58-237)||(25447247-25447426)
chr4 (57-239)||(11153145-11153327)
chr4 (61-239)||(48526545-48526723)
chr4 (56-239)||(51021160-51021342)
chr4 (57-236)||(25938038-25938217)
chr4 (61-239)||(18751602-18751780)
chr4 (60-235)||(2118295-2118470)
chr4 (54-239)||(4219923-4220108)
chr4 (75-239)||(12503453-12503617)
chr4 (47-221)||(11153530-11153703)
chr4 (60-221)||(23494445-23494605)
chr4 (56-221)||(25447619-25447783)
chr4 (60-221)||(33109686-33109846)
chr4 (54-221)||(25937666-25937832)
chr4 (60-221)||(46193788-46193948)
chr4 (50-218)||(12234321-12234488)
chr4 (56-184)||(33109883-33110011)
chr4 (60-221)||(38962202-38962362)
chr4 (57-221)||(15523617-15523780)
chr4 (53-221)||(22434561-22434726)
chr4 (60-218)||(4219559-4219716)
chr4 (57-222)||(22170319-22170482)
chr4 (57-220)||(48526195-48526356)
chr4 (54-221)||(51020793-51020959)
chr4 (55-172)||(18763951-18764068)
chr4 (56-173)||(54995498-54995614)
chr4 (43-166)||(20958296-20958419)
chr4 (61-174)||(2118724-2118837)
chr4 (49-174)||(44892577-44892702)
chr4 (55-174)||(45082429-45082547)
chr4 (58-174)||(35363029-35363146)
chr4 (76-174)||(43243709-43243807)
chr4 (56-164)||(48708293-48708401)
chr4 (57-186)||(10258304-10258433)
chr4 (56-172)||(48293592-48293708)
chr4 (56-172)||(48713777-48713893)
chr4 (76-174)||(43281220-43281317)
chr4 (61-174)||(16690939-16691052)
chr4 (1-57)||(56236276-56236332)
chr4 (57-128)||(16318251-16318322)
chr4 (71-170)||(20957202-20957301)
chr4 (58-167)||(48294979-48295088)
chr4 (57-221)||(17503973-17504135)
chr4 (116-184)||(43242328-43242396)
chr4 (59-167)||(44890518-44890626)
chr4 (126-221)||(12503819-12503913)
chr4 (58-184)||(16691491-16691616)
chr4 (58-166)||(55189528-55189636)
chr4 (61-230)||(40160466-40160633)
chr4 (126-221)||(17504343-17504437)
chr4 (119-174)||(44220806-44220861)
chr4 (157-221)||(35193406-35193469)
chr4 (60-219)||(24336149-24336307)
chr4 (58-173)||(30597951-30598065)
[»] chr6 (38 HSPs)
chr6 (55-239)||(12935154-12935338)
chr6 (54-239)||(22219717-22219902)
chr6 (53-239)||(11445351-11445537)
chr6 (61-221)||(10899942-10900102)
chr6 (57-239)||(31470314-31470496)
chr6 (56-237)||(23075494-23075675)
chr6 (57-239)||(20741465-20741650)
chr6 (58-239)||(18257501-18257682)
chr6 (61-239)||(18504922-18505100)
chr6 (55-239)||(2319669-2319852)
chr6 (56-221)||(18257135-18257299)
chr6 (56-221)||(20741098-20741262)
chr6 (49-221)||(11276965-11277136)
chr6 (58-221)||(10900313-10900475)
chr6 (59-230)||(15827639-15827811)
chr6 (58-239)||(4811621-4811801)
chr6 (57-221)||(15828024-15828187)
chr6 (49-221)||(28472628-28472798)
chr6 (49-221)||(29859817-29859987)
chr6 (57-219)||(11276589-11276751)
chr6 (54-220)||(31470700-31470865)
chr6 (56-221)||(12935540-12935704)
chr6 (54-174)||(11444983-11445103)
chr6 (59-174)||(18505348-18505463)
chr6 (61-174)||(2322647-2322760)
chr6 (58-221)||(1149814-1149977)
chr6 (57-155)||(23073998-23074096)
chr6 (56-146)||(1149463-1149553)
chr6 (60-174)||(29033436-29033550)
chr6 (49-174)||(18296136-18296261)
chr6 (58-170)||(4811372-4811484)
chr6 (60-171)||(29035069-29035180)
chr6 (61-174)||(3835155-3835268)
chr6 (58-114)||(22534214-22534270)
chr6 (151-219)||(35163572-35163639)
chr6 (188-239)||(1149558-1149609)
chr6 (48-111)||(31573710-31573773)
chr6 (171-237)||(32836114-32836179)
[»] chr5 (52 HSPs)
chr5 (56-239)||(19359500-19359683)
chr5 (56-239)||(5818927-5819110)
chr5 (54-239)||(8647802-8647987)
chr5 (57-239)||(8461295-8461477)
chr5 (54-239)||(24331555-24331742)
chr5 (60-239)||(2864756-2864935)
chr5 (60-239)||(14215243-14215422)
chr5 (56-239)||(18182968-18183151)
chr5 (57-239)||(25000453-25000635)
chr5 (58-239)||(164191-164371)
chr5 (57-237)||(29454739-29454919)
chr5 (56-239)||(16018951-16019134)
chr5 (58-237)||(15709335-15709513)
chr5 (54-221)||(18183352-18183518)
chr5 (56-221)||(2865138-2865302)
chr5 (58-221)||(8647438-8647600)
chr5 (54-221)||(15372256-15372422)
chr5 (58-220)||(5819313-5819474)
chr5 (56-221)||(24362219-24362383)
chr5 (58-221)||(19359136-19359298)
chr5 (44-221)||(29455125-29455301)
chr5 (53-221)||(15708966-15709132)
chr5 (60-218)||(15371873-15372030)
chr5 (56-221)||(8460928-8461092)
chr5 (55-221)||(14215626-14215791)
chr5 (54-221)||(164574-164740)
chr5 (56-221)||(14463904-14464067)
chr5 (64-239)||(24361843-24362017)
chr5 (64-239)||(24325218-24325392)
chr5 (58-174)||(7349446-7349562)
chr5 (59-174)||(4222151-4222266)
chr5 (57-174)||(16018588-16018704)
chr5 (58-174)||(4623148-4623264)
chr5 (58-174)||(7348559-7348675)
chr5 (71-221)||(24331943-24332095)
chr5 (80-220)||(25000112-25000251)
chr5 (58-174)||(4219663-4219779)
chr5 (59-174)||(6018315-6018429)
chr5 (71-184)||(6019189-6019302)
chr5 (140-219)||(14462686-14462769)
chr5 (71-174)||(4624654-4624757)
chr5 (57-230)||(41834434-41834606)
chr5 (146-239)||(10721873-10721965)
chr5 (146-237)||(27307148-27307238)
chr5 (109-174)||(13814156-13814226)
chr5 (146-236)||(28494931-28495020)
chr5 (60-219)||(22651347-22651505)
chr5 (151-219)||(16752955-16753022)
chr5 (157-221)||(28495225-28495288)
chr5 (157-221)||(32305916-32305979)
chr5 (56-219)||(28290030-28290192)
chr5 (163-220)||(27307443-27307499)
[»] chr3 (71 HSPs)
chr3 (48-239)||(37727294-37727485)
chr3 (57-239)||(20840925-20841107)
chr3 (56-239)||(4275728-4275911)
chr3 (52-236)||(29801783-29801967)
chr3 (57-237)||(39555577-39555757)
chr3 (54-239)||(43973804-43973989)
chr3 (57-237)||(31778652-31778832)
chr3 (55-239)||(17464488-17464672)
chr3 (55-238)||(5137346-5137529)
chr3 (48-230)||(23644838-23645020)
chr3 (57-239)||(27393660-27393842)
chr3 (54-239)||(22424810-22424995)
chr3 (58-239)||(25853234-25853415)
chr3 (57-232)||(30098134-30098309)
chr3 (56-236)||(26837358-26837538)
chr3 (61-228)||(32534962-32535129)
chr3 (56-222)||(31779034-31779199)
chr3 (83-237)||(41047065-41047218)
chr3 (61-235)||(26274570-26274744)
chr3 (61-237)||(24300560-24300735)
chr3 (58-221)||(39555960-39556122)
chr3 (55-221)||(20840557-20840722)
chr3 (56-221)||(5136978-5137142)
chr3 (61-221)||(41046703-41046862)
chr3 (54-221)||(24300939-24301105)
chr3 (55-214)||(48452986-48453144)
chr3 (46-221)||(32535342-32535520)
chr3 (57-221)||(37726928-37727091)
chr3 (57-221)||(23644461-23644624)
chr3 (57-221)||(27393960-27394123)
chr3 (54-174)||(30104478-30104598)
chr3 (58-221)||(43973441-43973603)
chr3 (58-170)||(29801356-29801468)
chr3 (50-221)||(26274950-26275119)
chr3 (54-221)||(26837739-26837904)
chr3 (62-208)||(22425209-22425354)
chr3 (60-221)||(25853610-25853770)
chr3 (59-174)||(32697129-32697244)
chr3 (61-174)||(25612406-25612519)
chr3 (57-221)||(17464874-17465038)
chr3 (47-174)||(51474763-51474890)
chr3 (58-184)||(23228427-23228552)
chr3 (56-169)||(45965936-45966049)
chr3 (59-172)||(51473429-51473542)
chr3 (58-174)||(50116838-50116954)
chr3 (54-155)||(25419140-25419242)
chr3 (56-174)||(37220555-37220673)
chr3 (56-144)||(37222030-37222118)
chr3 (77-172)||(18010176-18010271)
chr3 (60-170)||(25420574-25420684)
chr3 (55-221)||(27200076-27200240)
chr3 (53-220)||(50900913-50901078)
chr3 (55-221)||(36701480-36701645)
chr3 (51-221)||(49407789-49407957)
chr3 (163-221)||(55192222-55192279)
chr3 (61-172)||(32695706-32695817)
chr3 (151-221)||(37075781-37075850)
chr3 (57-172)||(23227261-23227370)
chr3 (146-230)||(37076049-37076133)
chr3 (57-219)||(51827956-51828117)
chr3 (152-219)||(8873784-8873850)
chr3 (56-219)||(55389603-55389765)
chr3 (61-219)||(22370599-22370757)
chr3 (187-221)||(49408167-49408201)
chr3 (146-219)||(2323466-2323538)
chr3 (14-51)||(7989463-7989500)
chr3 (152-221)||(27199796-27199864)
chr3 (182-219)||(32730775-32730812)
chr3 (55-219)||(52237203-52237366)
chr3 (14-46)||(30518151-30518183)
chr3 (55-103)||(52375832-52375880)
[»] scaffold0951 (2 HSPs)
scaffold0951 (55-239)||(2031-2215)
scaffold0951 (56-221)||(1665-1829)
[»] chr2 (42 HSPs)
chr2 (52-239)||(43058697-43058883)
chr2 (57-239)||(18450829-18451011)
chr2 (51-239)||(22374689-22374877)
chr2 (61-237)||(40027506-40027682)
chr2 (60-239)||(40815347-40815526)
chr2 (57-239)||(28616978-28617160)
chr2 (54-235)||(7446714-7446895)
chr2 (59-230)||(239725-239896)
chr2 (54-221)||(26538461-26538628)
chr2 (56-237)||(11090886-11091067)
chr2 (56-236)||(1978476-1978656)
chr2 (56-221)||(11090519-11090683)
chr2 (61-237)||(8425358-8425533)
chr2 (58-237)||(3025829-3026006)
chr2 (55-221)||(239350-239514)
chr2 (56-221)||(22374318-22374482)
chr2 (54-237)||(14432507-14432690)
chr2 (54-221)||(40815728-40815894)
chr2 (57-221)||(40027139-40027302)
chr2 (54-221)||(18451214-18451380)
chr2 (58-221)||(28616613-28616776)
chr2 (56-221)||(1978106-1978270)
chr2 (57-221)||(26538096-26538259)
chr2 (57-174)||(20444748-20444865)
chr2 (54-173)||(20440461-20440580)
chr2 (58-221)||(43058333-43058495)
chr2 (56-174)||(28847124-28847242)
chr2 (61-221)||(14432145-14432304)
chr2 (71-174)||(3025479-3025582)
chr2 (61-221)||(8425743-8425902)
chr2 (59-173)||(35781093-35781207)
chr2 (57-215)||(7446341-7446497)
chr2 (58-174)||(35779708-35779824)
chr2 (60-184)||(8972239-8972363)
chr2 (60-171)||(15551501-15551612)
chr2 (60-174)||(15552483-15552596)
chr2 (55-221)||(28143414-28143578)
chr2 (56-221)||(14942228-14942394)
chr2 (57-217)||(31797166-31797324)
chr2 (48-219)||(20128123-20128293)
chr2 (54-219)||(62953-63117)
chr2 (39-80)||(32418670-32418711)
[»] chr1 (46 HSPs)
chr1 (60-239)||(17433579-17433758)
chr1 (59-239)||(5539817-5539997)
chr1 (56-239)||(50970276-50970459)
chr1 (57-239)||(18984483-18984665)
chr1 (54-239)||(21856038-21856223)
chr1 (57-239)||(33143914-33144098)
chr1 (56-239)||(15646190-15646373)
chr1 (58-221)||(29307324-29307487)
chr1 (58-237)||(29869985-29870164)
chr1 (57-239)||(39154384-39154566)
chr1 (59-239)||(8678542-8678722)
chr1 (56-239)||(15173458-15173640)
chr1 (59-239)||(4636335-4636515)
chr1 (58-230)||(26859059-26859231)
chr1 (54-221)||(9019345-9019512)
chr1 (57-221)||(50970661-50970824)
chr1 (56-221)||(18984117-18984281)
chr1 (57-221)||(5540201-5540364)
chr1 (57-221)||(15646578-15646741)
chr1 (57-221)||(29869619-29869782)
chr1 (59-228)||(5962579-5962748)
chr1 (61-221)||(15173099-15173258)
chr1 (58-221)||(29306953-29307115)
chr1 (51-221)||(8678925-8679093)
chr1 (60-221)||(33144302-33144462)
chr1 (58-221)||(21856426-21856588)
chr1 (54-208)||(9018969-9019122)
chr1 (56-174)||(26859488-26859606)
chr1 (61-221)||(5962961-5963120)
chr1 (46-221)||(17433204-17433378)
chr1 (58-239)||(17112282-17112462)
chr1 (60-221)||(39154021-39154181)
chr1 (57-174)||(52268289-52268406)
chr1 (54-144)||(2733416-2733506)
chr1 (60-174)||(52269177-52269291)
chr1 (83-158)||(47827033-47827108)
chr1 (60-133)||(47826966-47827039)
chr1 (49-221)||(44802555-44802726)
chr1 (118-221)||(4636033-4636134)
chr1 (151-221)||(17088243-17088312)
chr1 (55-221)||(17088524-17088688)
chr1 (58-208)||(9833549-9833698)
chr1 (146-208)||(45048533-45048594)
chr1 (146-215)||(44291701-44291769)
chr1 (58-139)||(50419725-50419806)
chr1 (157-221)||(45048253-45048316)
[»] scaffold0417 (2 HSPs)
scaffold0417 (58-237)||(10989-11168)
scaffold0417 (77-222)||(10640-10784)
[»] scaffold1223 (2 HSPs)
scaffold1223 (53-221)||(1123-1291)
scaffold1223 (60-221)||(755-914)
[»] scaffold0007 (4 HSPs)
scaffold0007 (61-236)||(64672-64847)
scaffold0007 (57-221)||(64301-64464)
scaffold0007 (60-221)||(205752-205911)
scaffold0007 (146-221)||(205038-205112)
[»] scaffold0295 (2 HSPs)
scaffold0295 (55-221)||(4790-4955)
scaffold0295 (60-230)||(5168-5334)
[»] scaffold0019 (1 HSPs)
scaffold0019 (52-221)||(134056-134224)
[»] scaffold0157 (2 HSPs)
scaffold0157 (75-239)||(16860-17024)
scaffold0157 (126-221)||(16564-16658)
[»] scaffold0273 (2 HSPs)
scaffold0273 (56-221)||(4590-4754)
scaffold0273 (97-239)||(4242-4384)
[»] scaffold0027 (2 HSPs)
scaffold0027 (61-221)||(42172-42332)
scaffold0027 (47-221)||(42542-42714)
[»] scaffold0432 (2 HSPs)
scaffold0432 (61-174)||(10301-10414)
scaffold0432 (61-228)||(9935-10100)
[»] scaffold0176 (2 HSPs)
scaffold0176 (58-155)||(19069-19166)
scaffold0176 (57-221)||(18834-18996)
[»] scaffold0113 (1 HSPs)
scaffold0113 (57-172)||(28674-28789)
[»] scaffold1585 (1 HSPs)
scaffold1585 (59-170)||(568-679)
[»] scaffold1696 (1 HSPs)
scaffold1696 (71-175)||(462-566)
[»] scaffold0076 (1 HSPs)
scaffold0076 (61-161)||(8451-8551)
[»] scaffold0057 (2 HSPs)
scaffold0057 (61-174)||(61887-62000)
scaffold0057 (49-132)||(61019-61102)
[»] scaffold0168 (1 HSPs)
scaffold0168 (107-184)||(7707-7784)


Alignment Details
Target: chr8 (Bit Score: 159; Significance: 8e-85; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 13225185 - 13225003
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccct 13225003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 55 - 237
Target Start/End: Original strand, 19176287 - 19176469
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176386  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||    
T  19176387 tgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctaccc 19176469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 12572393 - 12572215
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttaggcggttttagatctacccct 12572215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 41681679 - 41681498
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttaggcggttttagacctacccct 41681498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 9928912 - 9929088
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttaggcggttttagacctaccc 9929088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 11657003 - 11656821
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| || || |||| ||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattgtagacctacccct 11656821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 60 - 239
Target Start/End: Complemental strand, 33328683 - 33328504
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttaggcggttttaaacctacccct 33328504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 44831246 - 44831428
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||| |||||||||| || |||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttaggcggttttagacctgcccct 44831428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 31133764 - 31133593
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  159 gcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 230  Q
    |||||||||||| ||| |||||||||||||||||||||| ||||||||||| | ||||||  ||||||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggttttatgcggttttaga 31133593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 54 - 239
Target Start/End: Original strand, 33742918 - 33743102
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  33742918 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaa-cggtctttcaattatcattt 33743016  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  33743017 ttgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccct 33743102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 34541097 - 34540942
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  34541097 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattt 34540998  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatg 209  Q
    ||||||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  34540997 ttgttgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatg 34540942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 19176841 - 19176673
Alignment:
Q  52 tatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 151  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19176841 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 19176742  T
Q  152 ttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||||  || ||||| |  ||||| ||||||||| ||||| |||||||||||    
T  19176741 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagacaaatgacagttttagac 19176673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 56 - 218
Target Start/End: Original strand, 41681132 - 41681292
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagtttta 218  Q
    |||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| ||||||||    
T  41681232 gttgcatttttcgtcctac-ccccatttt-attctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 11656451 - 11656618
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||    
T  11656451 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccattt 11656550  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactcc-agaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||  || ||||| |  |||| | |||||||||||||||||||||||||||    
T  11656551 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatggcagttttagac 11656618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 12571858 - 12572026
Alignment:
Q  53 atttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 152  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||||||||||    
T  12571858 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatt 12571957  T
Q  153 tttgttgcatttttcgtcct-acatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||| ||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  12571958 tttgttgcatttttcgtcctaaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 12572026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 209
Target Start/End: Original strand, 4629795 - 4629948
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||  ||||||  | ||||||||||||| || |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatg 209  Q
     |||||||||||||| ||| |||||||||||||||||||||||||| |||||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatg 4629948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 31133218 - 31133382
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |||||||| ||||||||| ||||||||||    
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt 31133317  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  31133318 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 31133382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 9930203 - 9930040
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||  || ||||| |  ||||| || ||||||||||||  ||||||||||    
T  9930103 ttgcatttttcgtcctaccccccatttt-attctccaaaagcgcagagaaatgatagttttagac 9930040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 33328161 - 33328320
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||   | ||||| |  ||||| ||||||| ||||||| |||||||||||    
T  33328261 atttttcgtcctaccctcgatttt-attctccaaaaacgcaaagaaatgacagttttagac 33328320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 44831793 - 44831628
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||||    
T  44831793 ttaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttt 44831694  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||| |||||||  || ||||| |  ||||| |||| |||||||||| |||||||||||    
T  44831693 tgttgcatttttggtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagac 44831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 48 - 221
Target Start/End: Original strand, 13224631 - 13224802
Alignment:
Q  48 tttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaatta 147  Q
    |||| |||| ||| |||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  |||||||||||    
T  13224631 ttttaattttggcataattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaatta 13224729  T
Q  148 tcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||| ||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  13224730 tcatttttgttgaatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 13224802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 167
Target Start/End: Complemental strand, 9178180 - 9178071
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  158 tgcatttttc 167  Q
    ||||||||||    
T  9178080 tgcatttttc 9178071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| |||||||||| |||||||||||| ||||||||||| | |||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  156 gttgcattttt 166  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 8074097 - 8073985
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||| |  || || ||||||||||||||||||||   |||||||||||||| |||||    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttg 8073999  T
Q  157 ttgcatttttcgtc 170  Q
    ||||||||| ||||    
T  8073998 ttgcattttacgtc 8073985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 33743412 - 33743302
Alignment:
Q  110 ctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatg 209  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||     
T  33743412 ctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaata 33743314  T
Q  210 gcagttttagac 221  Q
     |||||||||||    
T  33743313 acagttttagac 33743302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 9177724 - 9177813
Alignment:
Q  150 atttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||| ||| || ||| |||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttaggcggttttagacctacccct 9177813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 4630337 - 4630175
Alignment:
Q  52 tatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 151  Q
    |||||| | ||||||| ||||||| || ||||||||||| |||||||||||| | |||||||  ||||||||||||| | ||||||||||||||||        
T  4630337 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta---- 4630242  T
Q  152 ttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
      |||||||||||||| ||||||  || ||||| |  ||||| ||||||||| ||||| |||||||||||    
T  4630241 --ttgttgcatttttcatcctaccccccatttt-attctccaaaaacgcagaaaaatgacagttttagac 4630175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 10918122 - 10918235
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||| ||||||| | |||| ||||||||||||||  |||||||||||| | ||| ||||   |||||||||| |||||  ||||||||| ||||||||    
T  10918122 tttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcattt 10918221  T
Q  154 ttgttgcatttttc 167  Q
    ||||||||||||||    
T  10918222 ttgttgcatttttc 10918235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 10919732 - 10919691
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactca 98  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  10919732 aggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 43958264 - 43958301
Alignment:
Q  137 tccttcaattatcatttttgttgcatttttcgtcctac 174  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctac 43958301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 43958203 - 43958254
Alignment:
Q  52 tatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaa 103  Q
    ||||||| ||||||||||||||||||| ||||||||||  ||||||||||||    
T  43958203 tatttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 35427361 - 35427198
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| ||||||||||||||  ||||| || |||||||||| | || || ||  ||| |||| ||||||||  |||| | |||||| || ||    
T  35427361 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattat-atatt 35427263  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    | ||||| |||| |||| |  |||   |||| ||||||| ||||||| ||||||| |||||||||    
T  35427262 ttttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttag 35427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 91
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggc 91  Q
    |||||||||||| |||||||||||||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 18805267 - 18805324
Alignment:
Q  163 ttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||| ||||||| |||||| ||||| |||||||||| |||||||||| |||||||||||    
T  18805267 ttttagtcctacctcctatcttcaa-ctccagaaacacagagaaatgacagttttagac 18805324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 6115661 - 6115612
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaa 103  Q
    ||||||||||||||||||||||||||| || ||||| || |||| |||||    
T  6115661 tttaggcttaattatacttttggtccttgtattttgaccaactcgcgaaa 6115612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 3e-84; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 54 - 239
Target Start/End: Complemental strand, 19591074 - 19590889
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19591074 tttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 19590975  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  19590974 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 19590889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 54 - 239
Target Start/End: Complemental strand, 37787316 - 37787131
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||    
T  37787316 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcattt 37787217  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| | | |||||||| ||||||||    
T  37787216 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttttggcagttttagacctacccct 37787131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 54 - 239
Target Start/End: Complemental strand, 38859190 - 38859005
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  38859190 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattt 38859091  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||| || |||||    
T  38859090 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctgcccct 38859005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 56 - 239
Target Start/End: Original strand, 32004612 - 32004795
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagttttaagcggttttagacctacccct 32004795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 56 - 235
Target Start/End: Original strand, 2658837 - 2659016
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctac 235  Q
    ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggccgttttagacctac 2659016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 35288903 - 35289084
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||||| ||||||||  |||||||||| ||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagttttaagcggttttagacctacccct 35289084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 19830965 - 19830784
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttaggcggttttagacctacccct 19830784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 4641983 - 4641817
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||||||||||||||||||||||   ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 230  Q
    || ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttaga 4641817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 56 - 239
Target Start/End: Original strand, 34533789 - 34533972
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |||| |||| ||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||||||| || |||||| | |||||||| ||||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttaggcagttttagacctacccct 34533972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 29099863 - 29100028
Alignment:
Q  71 ttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 170  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  171 ctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacc 236  Q
    |||| |||||||||||||| ||||||||| ||| ||||| |||||||||   |||||||| |||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttaggaagttttagacctacc 29100028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 55 - 239
Target Start/End: Original strand, 23952727 - 23952912
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcc-tactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    | ||||||||||||||||||| | |||||||||||| |||||||||||||||||||  |||||||| | |||||| | ||||||||    
T  23952827 tggttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttaggcagttttaaacctacccct 23952912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 19830418 - 19830582
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  19830518 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 19830582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 37786766 - 37786929
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  37786866 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 37786929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 19590525 - 19590687
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||| ||||||  || ||||| |  ||||| |||| |||||||||| |||||||||||    
T  19590625 tgcatttttcatcctaccccccatttt-attctccaaaaacccagagaaatgacagttttagac 19590687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 221
Target Start/End: Complemental strand, 34534338 - 34534174
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| |||  |||||||||| |||||||||||    
T  34534238 gttgcatttttcgtcctaccccccatttt-attctccaaaaaaacagagaaatgacagttttagac 34534174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 32005164 - 32004997
Alignment:
Q  53 atttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 152  Q
    |||| |||||||||| ||||||||||||| ||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  32005164 attttggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatt 32005065  T
Q  153 tttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  32005064 tttgttgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttagac 32004997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 38858642 - 38858805
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||| |||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  38858742 ttgcatttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 38858805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 35289448 - 35289334
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  156 gttgcatttttcgtc 170  Q
    |||||||||||||||    
T  35289348 gttgcatttttcgtc 35289334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 2659388 - 2659223
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| | |||||||||||| ||||||||||| ||| |||||| ||| |||||||||||||||||||||||||||| |||||||||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2659289  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||| ||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  2659288 tgttgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 2659223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 38160945 - 38161067
Alignment:
Q  52 tatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 151  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||  ||||||||||||| ||    
T  38160945 tatttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattat 38161044  T
Q  152 ttttgttgcatttttcgtcctac 174  Q
    |||||||||||||||||||||||    
T  38161045 ttttgttgcatttttcgtcctac 38161067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 61 - 221
Target Start/End: Complemental strand, 29100393 - 29100234
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||| |||||||  || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  29100293 attttttgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttagac 29100234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 4641443 - 4641602
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||| |||||||||||| |||||||||||||||||||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||  || ||||| |  ||||| ||| |||||||||||  ||||||||||    
T  4641543 atttttcgtcctaccccccatttt-attctccaaaaatgcagagaaatgatagttttagac 4641602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 23953261 - 23953112
Alignment:
Q  71 ttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 170  Q
    |||||||||||||||||||  |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23953261 ttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 23953162  T
Q  171 ctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
     |||  || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  23953161 ataccccccatttt-attctccaaaaacgcagagaaataacagttttagac 23953112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 4478247 - 4478133
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| |||| || ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |  ||||||||||||||||||||    
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  156 gttgcatttttcgtc 170  Q
    |||||||||||||||    
T  4478147 gttgcatttttcgtc 4478133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 28583437 - 28583555
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| |||||||||||||||||||||||||||||| || | | || |||||||||||||||| || ||||| ||||||||||||||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  156 gttgcatttttcgtcctac 174  Q
     ||||||||||||||||||    
T  28583537 attgcatttttcgtcctac 28583555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 28584466 - 28584355
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| |||||| ||||||||| ||||||||| |||||||| | ||| || ||||||||||||||||||||  |||||||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  159 gcatttttcgtc 170  Q
    | ||||||||||    
T  28584366 gtatttttcgtc 28584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 4477800 - 4477882
Alignment:
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||| |   |||||||| ||||||||    
T  4477800 ttgcagttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacccct 4477882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 35578986 - 35579060
Alignment:
Q  146 tatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||| ||| ||||| ||||  ||||||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  35578986 tatcatgttttttgcagttttaatcctacatcctattttcaa-ctccagaaacgcagagaaatgacatttttagac 35579060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 9181534 - 9181692
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||||||||    ||||| || |||||||||| | |||||  | |||| |||  ||||||||  |||||| || ||| |||||| |||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-attttttttg 9181632  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    || |||| ||||||  |||   |||| ||||||||||||||| ||||||| |||||||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 9181692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 218
Target Start/End: Original strand, 9393738 - 9393894
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||| ||||||  |||||  |  ||||||||| | ||| ||||  ||| |||  ||||||||| |||||  || |||||| ||| |||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtccta-aactatcatgttttttg 9393836  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagtttta 218  Q
    |  |||| ||||||| |||||||||||| |||||||||| ||| |||||| ||||||||    
T  9393837 ctgttttagtcctacctcctattttcaa-ctccagaaacacagtgaaatgacagtttta 9393894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 49064033 - 49064171
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||| ||||| ||  ||||||||| | ||  ||||  ||| ||| |||||||||   ||| | || |||||| |||     
T  49064033 aggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactatcatgttt- 49064131  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaa 197  Q
    ||||| |||| ||||||  |||||||||| |||||||||||    
T  49064132 ttgcacttttagtcctaactcctattttc-aactccagaaa 49064171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 3e-84; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 46193405 - 46193586
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccct 46193586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 55 - 239
Target Start/End: Complemental strand, 23494991 - 23494807
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| |||||| |||||||||| ||||||||    
T  23494891 tgttgcatttttcgtcctacatcctattctcaaactccagaaacgtaaagaaatggcaattttaggcggttttagacctacccct 23494807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 22434179 - 22434360
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 22434360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 45082969 - 45082788
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccct 45082788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 56 - 239
Target Start/End: Original strand, 15523233 - 15523416
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
     |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||  |||||||||| ||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttatgcggttttagacctacccct 15523416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 12234874 - 12234693
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||| | |||||||| ||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttaggcagttttagacctacccct 12234693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 54995067 - 54995248
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    ||||||||||||||||||| |||||||||||||||||||||| | ||||||||| ||||||||| |||||||||| ||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggttttagacctaccc 54995248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 55 - 239
Target Start/End: Complemental strand, 20471059 - 20470875
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttt 20470960  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||||    
T  20470959 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccct 20470875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 58 - 237
Target Start/End: Original strand, 25447247 - 25447426
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| || |||||| | |||||||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttaggcagttttagacctaccc 25447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 11153145 - 11153327
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 11153327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 48526723 - 48526545
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||| ||||||||| |||||||||| ||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttaggcggttttagacctacccct 48526545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 56 - 239
Target Start/End: Complemental strand, 51021342 - 51021160
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-tttt 51021244  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttaggcggttttagacctacccct 51021160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 57 - 236
Target Start/End: Complemental strand, 25938217 - 25938038
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacc 236  Q
    |||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||||  |||||||||| |||||    
T  25938117 ttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagttttatgcggttttagacctacc 25938038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 18751602 - 18751780
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttaggcggttttagacttacccct 18751780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 2118295 - 2118470
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctac 235  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttaggcggttttagacctac 2118470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 54 - 239
Target Start/End: Complemental strand, 4220108 - 4219923
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||| ||||||||||||||    
T  4220108 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcattt 4220009  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||  ||||||||| |||||||||| | ||||||    
T  4220008 ttgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttaggcggttttagacccacccct 4219923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 75 - 239
Target Start/End: Original strand, 12503453 - 12503617
Alignment:
Q  75 ggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 174  Q
    ||||||||||||||| | |||||||||||||  ||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  175 atcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
     |||||||||||||||||||||||||||||||||  ||||||||| || ||||||| ||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccct 12503617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 47 - 221
Target Start/End: Complemental strand, 11153703 - 11153530
Alignment:
Q  47 atttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaatt 146  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  11153703 attttttttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaatt 11153604  T
Q  147 atcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||||||||||||   | ||||| |  ||||| ||||||||||||||  |||||||||||    
T  11153603 atcatttttgttgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaataacagttttagac 11153530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 23494445 - 23494605
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||  || ||||| |  ||||| | ||||||||||||| |||||||||||    
T  23494545 catttttcgtcctaccccccatttt-attctccaaacacgcagagaaatgacagttttagac 23494605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 221
Target Start/End: Complemental strand, 25447783 - 25447619
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||   | ||||| |  ||||| ||||||||||||||  |||||||||||    
T  25447683 gttgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaattacagttttagac 25447619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 33109686 - 33109846
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  33109786 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 33109846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 25937666 - 25937832
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25937666 tttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 25937765  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||| |||||    || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  25937766 ttgttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttagac 25937832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 46193948 - 46193788
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||  || ||||| |  ||||| ||||| |||||| || |||||||||||    
T  46193848 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaattgacagttttagac 46193788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 50 - 218
Target Start/End: Original strand, 12234321 - 12234488
Alignment:
Q  50 tttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatc 149  Q
    |||| ||||||||||||| ||||||||||||| ||||||||| || |||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  12234321 tttaattaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc 12234420  T
Q  150 atttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagtttta 218  Q
    |||||||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||  ||||||||    
T  12234421 atttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 56 - 184
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  156 gttgcatttttcgtcctacatcctatttt 184  Q
    ||||||||||||||||||| |||||||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 38962362 - 38962202
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| | |||||||||||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||  || ||||| |  || || ||||||||||||||| |||||||||||    
T  38962262 catttttcgtcctaccccccatttt-attcttcaaaaacgcagagaaatgacagttttagac 38962202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 15523780 - 15523617
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||| ||||||| |||||||||||    
T  15523680 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttagac 15523617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 22434726 - 22434561
Alignment:
Q  53 atttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 152  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||    
T  22434726 atttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatt 22434628  T
Q  153 tttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  22434627 tttgttgcatttttcgtcctac-ccccatttt-attctccaaaaacgcagagaaatgacagttttagac 22434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 60 - 218
Target Start/End: Original strand, 4219559 - 4219716
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| |||||||| |||||||| | |||||||| ||||||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagtttta 218  Q
    |||||||||||||||  || ||||| |  ||||| ||||||||||||||| ||||||||    
T  4219659 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 22170482 - 22170319
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||| | |||||||| |||||||||| |||||||||||| |||||||||||||||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaatt-gtcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacg 222  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| ||||||||||||    
T  22170383 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacg 22170319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 57 - 220
Target Start/End: Original strand, 48526195 - 48526356
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||| ||||||||||| |||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttaga 220  Q
    ||||||||||||||||||  || ||||| |  ||||| ||| ||||||||||| ||||||||||    
T  48526295 ttgcatttttcgtcctac-ccccatttt-attctccaaaaatgcagagaaatgacagttttaga 48526356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 51020793 - 51020959
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||| ||||| |||||||||  | |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  51020793 tttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcattt 51020892  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||  || ||||| |  || || ||||| ||||||||| |||||||||||    
T  51020893 ttgttgcatttttcgtcctaccccccatttt-attcttcaaaaacgtagagaaatgacagttttagac 51020959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| |||| ||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  155 tgttgcatttttcgtcct 172  Q
    ||||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 54995614 - 54995498
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||||||| |||||||||||||||||||| ||||| ||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-tttt 54995516  T
Q  156 gttgcatttttcgtccta 173  Q
    ||||||||||||||||||    
T  54995515 gttgcatttttcgtccta 54995498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 20958419 - 20958296
Alignment:
Q  43 tcctatttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttc 142  Q
    ||||| |||| |||| ||||||||| |||||| |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||   |||||||    
T  20958419 tcctagttttctttacgcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttc 20958320  T
Q  143 aattatcatttttgttgcattttt 166  Q
    ||||||||||||||||||||||||    
T  20958319 aattatcatttttgttgcattttt 20958296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 2118837 - 2118724
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||| |||||||||||||| |||| |||||| |||||  |||||||||||| |||||||||||| |||||||||||||||||||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  161 atttttcgtcctac 174  Q
    ||||||||||||||    
T  2118737 atttttcgtcctac 2118724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 174
Target Start/End: Complemental strand, 44892702 - 44892577
Alignment:
Q  49 ttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattat 148  Q
    ||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||||| | || ||||| ||||||||||||||||||| ||| |||||||||    
T  44892702 ttttaattaagcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattat 44892603  T
Q  149 catttttgttgcatttttcgtcctac 174  Q
      ||||||||||||||||||||||||    
T  44892602 attttttgttgcatttttcgtcctac 44892577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 45082429 - 45082547
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||| |||||||  ||||||||| ||||||||||| ||||||||||| || ||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  155 tgttgcatttttcgtcctac 174  Q
    ||||||||||||||||||||    
T  45082528 tgttgcatttttcgtcctac 45082547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 35363146 - 35363029
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgccctttt-aaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| || |||| ||||| |||| | |||||||||||| |||||||||||||||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  157 ttgcatttttcgtcctac 174  Q
    ||||||||||||| ||||    
T  35363046 ttgcatttttcgttctac 35363029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 43243807 - 43243709
Alignment:
Q  76 gtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 174  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||  || |||||||||||||||||||||||||||| |||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac 43243709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 48708293 - 48708401
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| |||||||||||  |||||||||||||  ||||||| |  |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  156 gttgcattt 164  Q
    |||||||||    
T  48708393 gttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 186
Target Start/End: Complemental strand, 10258433 - 10258304
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||| | |||||||||||||||||||||  ||||  ||  |||||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  157 ttgcatttttcgtcctacatcctattttca 186  Q
    ||||| |||| ||| |||  ||||||||||    
T  10258333 ttgcagttttagtcttaccccctattttca 10258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 172
Target Start/End: Original strand, 48293592 - 48293708
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| |  ||||| |  ||||||||| |||||||  || |||||||||||||||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  156 gttgcatttttcgtcct 172  Q
    |||||||||||| ||||    
T  48293692 gttgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 48713893 - 48713777
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| ||||||| ||||||  | |||||||||| ||||||||| |||| | ||| ||| |||||||||||||||||||  ||||||||||||||||||||    
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  156 gttgcatttttcgtcct 172  Q
    |||||||||||||||||    
T  48713793 gttgcatttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 43281317 - 43281220
Alignment:
Q  76 gtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 174  Q
    |||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||  || |||||||||| |||||||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctac 43281220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 174
Target Start/End: Original strand, 16690939 - 16691052
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| | |||||||||| ||||||||  |||||||||||| | ||||||||  ||||||||| |||||||   ||||||||||||||||||||||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  161 atttttcgtcctac 174  Q
    ||||||||||||||    
T  16691039 atttttcgtcctac 16691052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 56236276 - 56236332
Alignment:
Q  1 tgttattattgggagcacataaggtactttacctaagttttctcctatttttattta 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56236276 tgttattattgggagcacataaggtactttacctaagttttctcctatttttattta 56236332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaa 128  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 20957202 - 20957301
Alignment:
Q  71 ttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 170  Q
    |||||||||||| |||||||| ||||||||||| | ||| | | ||||||||||| |||||||  ||||||||||||||| |||||||||||||||||||    
T  20957202 ttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcatttttcgtc 20957301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 167
Target Start/End: Complemental strand, 48295088 - 48294979
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| | |||||||| ||||||||||  |||||||||||| | ||| ||||  ||||||||| |||||||  ||| ||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  158 tgcatttttc 167  Q
    ||||||||||    
T  48294988 tgcatttttc 48294979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 17503973 - 17504135
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||||||| ||||||||||  ||||| ||  ||||||||| | ||||||||  ||| |||  ||||| ||| |||||  || |||||| |||     
T  17503973 aggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgtttt 17504071  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||| |||| ||||||| |||||||||||| ||||||||||| ||||||||| |||||||||||    
T  17504072 ttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttagac 17504135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 43242328 - 43242396
Alignment:
Q  116 ttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcctatttt 184  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||| |||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaatttt 43242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 167
Target Start/End: Original strand, 44890518 - 44890626
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| | |||||||||| |||||||| |||| |||||||| | ||| |||||||||||||||||||||||   ||||| ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  159 gcatttttc 167  Q
    |||||||||    
T  44890618 gcatttttc 44890626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 12503913 - 12503819
Alignment:
Q  126 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 12503819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 16691616 - 16691491
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||| |||  |||||||| ||||||||||||| | ||||||||  |||||| || |||||||  |||||| |||||| ||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  158 tgcatttttcgtcctacatcctatttt 184  Q
    ||||||||||||| ||| ||| |||||    
T  16691517 tgcatttttcgtcatacctcccatttt 16691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 55189528 - 55189636
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||||| ||||| ||||||||||||| |||| |||  ||| | ||  ||||||||||||| |||||||||  ||| |||||||||||||||||     
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgc 55189627  T
Q  158 tgcattttt 166  Q
    | |||||||    
T  55189628 tacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 40160633 - 40160466
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| | |||||||||| |  ||||| || |||||||||| ||||| ||||  ||| |||  ||||||||| |||||  || |||||| ||| ||||    
T  40160633 ttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtccta-aactatcatgttttttgc 40160535  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 230  Q
    | |||| ||| ||| |||||||||||| ||||||||||| |||||||  |||||||||| | ||||||||    
T  40160534 agttttagtcttacctcctattttcaa-ctccagaaacgtagagaaaatgcagttttaggcagttttaga 40160466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 17504437 - 17504343
Alignment:
Q  126 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||| |||||| || ||| || ||| ||||| |||| || |||| |||||||||  ||||| ||||||||||||||||| |||||||||||    
T  17504437 gaacaaaaccgtccttaaactat-atgttttttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagttttagac 17504343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 44220861 - 44220806
Alignment:
Q  119 taaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 174  Q
    |||||||||||||||  |||||||| |||||||||||||| |||||||||| ||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctac 44220806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 35193406 - 35193469
Alignment:
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||| |||| ||||||  |||||||||||| || |||||||||||||||||| |||||||||||    
T  35193406 ttgcagttttagtcctatctcctattttcaa-cttcagaaacgcagagaaatgacagttttagac 35193469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 219
Target Start/End: Complemental strand, 24336307 - 24336149
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||| ||||||  ||||| |   ||||||||| | ||||||||  ||| |||  ||||||||| || | | ||||||||| ||| |||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttg 24336208  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    |  |||| |||||||  | ||||||||| ||||||||||| | ||||||||||| |||||    
T  24336207 ctcttttagtcctaccccatattttcaa-ctccagaaacgtatagaaatggcagctttag 24336149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 30598065 - 30597951
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctg-cccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||| |||| ||||||||||||||||||||| || ||||||| || | || ||| | |||||||| | ||||||||  |||| | |||||| |||||||    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  157 ttgcatttttcgtccta 173  Q
    ||||| |||| ||||||    
T  30597967 ttgcacttttggtccta 30597951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 55 - 239
Target Start/End: Original strand, 12935154 - 12935338
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagatatacccct 12935338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 54 - 239
Target Start/End: Complemental strand, 22219902 - 22219717
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22219902 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 22219803  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||||    
T  22219802 ttgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttaggcggttttagacctacccct 22219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 11445537 - 11445351
Alignment:
Q  53 atttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 152  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  11445537 atttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatt 11445438  T
Q  153 tttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||| | ||||||    
T  11445437 tttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacccacccct 11445351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 10899942 - 10900102
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 10900102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 31470314 - 31470496
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| ||| ||||||||| |||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcgattttagacctacccct 31470496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 23075675 - 23075494
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    |||||||||||||| |||| ||||||||| |||||||| ||| ||||||||||| ||||||||| | |||||||| ||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttaggcagttttagacctaccc 23075494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 20741650 - 20741465
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcat---tt 153  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||   ||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    || |||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccct 20741465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 18257682 - 18257501
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    | ||||||||||||||| || ||||||| ||||||| | ||| ||||||||| ||||||||| |||||||||| ||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttaggcggttttagacctacccct 18257501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 18504922 - 18505100
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||| |||||||||||||||| ||||| | ||||||||| ||||||||| || ||||||| ||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttaggcgattttagacctacccct 18505100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 55 - 239
Target Start/End: Original strand, 2319669 - 2319852
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||||  || ||||| |  |||||||||||||||||||||  |||||||| |||||||||| ||||||||    
T  2319769 tgttgcatttttcgtcctaccccccatttt-attctccagaaacgcagagaaatgatagttttaggcggttttagacctacccct 2319852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 18257135 - 18257299
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||| |||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  18257235 gttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 18257299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 20741098 - 20741262
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  20741198 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 20741262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 11277136 - 11276965
Alignment:
Q  49 ttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattat 148  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  11277136 ttttattttggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattat 11277037  T
Q  149 catttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||||||||||  || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  11277036 catttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgaagagaaatgacagttttagac 11276965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 58 - 221
Target Start/End: Complemental strand, 10900475 - 10900313
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  10900375 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 10900313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 59 - 230
Target Start/End: Original strand, 15827639 - 15827811
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaa--acggtccttcaattatcatttttg 156  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||| || ||| |||||||||||| ||||||  |||||||||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 230  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||| || |||||| ||||||||||    
T  15827739 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca-ttttaggcggttttaga 15827811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 4811801 - 4811621
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||  || |||  ||||||||||||||||||||||||||||||||||||||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||| || ||| |||||||||||||| ||| ||||||||| |||||||| ||||||   |||||||| ||||||||    
T  4811701 tgcatttttcatcatacctcctattttcaaaccccataaacgcaga-aaatggcaattttaggtagttttagacctacccct 4811621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 15828187 - 15828024
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  15828087 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttagac 15828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 28472628 - 28472798
Alignment:
Q  49 ttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattat 148  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||||| |||| |||||||||    
T  28472628 ttttatttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattat 28472727  T
Q  149 catttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  28472728 catttttgttgcatttttcgtcctac-ccccatttt-attctccaaaaacgcagagaaatgacagttttagac 28472798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 29859817 - 29859987
Alignment:
Q  49 ttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattat 148  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||||| |||| |||||||||    
T  29859817 ttttatttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattat 29859916  T
Q  149 catttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  29859917 catttttgttgcatttttcgtcctac-ccccatttt-attctccaaaaacgcagagaaatgacagttttagac 29859987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 11276589 - 11276751
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| || ||| |||| |||||||||| ||||||| ||||||  |||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 11276751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 54 - 220
Target Start/End: Complemental strand, 31470865 - 31470700
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||| ||||||||| |||||||||||| ||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  31470865 tttatgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcattt 31470766  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttaga 220  Q
    |||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| || |||||||    
T  31470765 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacaattttaga 31470700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 56 - 221
Target Start/End: Complemental strand, 12935704 - 12935540
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||| |||||||||||||||  || ||||| |  ||||| |||| |||||||||| |||||||||||    
T  12935604 gttacatttttcgtcctaccccccatttt-attctccataaacacagagaaatgacagttttagac 12935540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 11444983 - 11445103
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| |||| |||||||||||||||||||    
T  11444983 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcattt 11445082  T
Q  154 ttgttgcatttttcgtcctac 174  Q
    |||||||||||||||||||||    
T  11445083 ttgttgcatttttcgtcctac 11445103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 18505463 - 18505348
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  159 gcatttttcgtcctac 174  Q
    ||||||||||||||||    
T  18505363 gcatttttcgtcctac 18505348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 2322760 - 2322647
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  161 atttttcgtcctac 174  Q
    ||||||||||||||    
T  2322660 atttttcgtcctac 2322647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 221
Target Start/End: Complemental strand, 1149977 - 1149814
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  158 tgcatttttcgtcctacatcctattttcaaactcc-agaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||  || ||||| |  |||| | ||||||||||||||| |||||||||||    
T  1149877 tgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatgacagttttagac 1149814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 23073998 - 23074096
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaatt 146  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 60 - 174
Target Start/End: Original strand, 29033436 - 29033550
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  160 catttttcgtcctac 174  Q
    ||  |||| ||||||    
T  29033536 cacatttcatcctac 29033550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 18296136 - 18296261
Alignment:
Q  49 ttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattat 148  Q
    |||| |||||||||||||||| |||| |||||||||||||| | ||||||| ||| |  |  |||||||||||||||||||||||| |||||||| ||||    
T  18296136 ttttttttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttat 18296235  T
Q  149 catttttgttgcatttttcgtcctac 174  Q
    ||||||||||||||||||||||||||    
T  18296236 catttttgttgcatttttcgtcctac 18296261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 4811372 - 4811484
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||||  || |||||| |||||||||||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  158 tgcatttttcgtc 170  Q
    | |||||||||||    
T  4811472 ttcatttttcgtc 4811484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 29035180 - 29035069
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| |||||| ||||||||||||| |||||||||||||| | ||  |||||||||||||||||||||||  |||||| | |||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  160 catttttcgtcc 171  Q
    ||||||||||||    
T  29035080 catttttcgtcc 29035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 3835268 - 3835155
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||  |||||||| ||||||||||||| | ||||||||  |||||||||||||||||  |||||| ||||||||||||||| ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  161 atttttcgtcctac 174  Q
    ||||||||||||||    
T  3835168 atttttcgtcctac 3835155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcc 114  Q
    |||||||||| ||||||||||||||| ||||| || |||||||||| | ||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 35163639 - 35163572
Alignment:
Q  151 tttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    ||||| ||||| |||| ||||||| |||||||||| ||||||| |||| |||||||||| |||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttc-aactccaaaaacacagagaaatgacagttttag 35163572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 1149558 - 1149609
Alignment:
Q  188 actccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||| ||||||||| |||||||||| || ||||||| ||||||||    
T  1149558 actccagaaacacagagaaatagcagttttaggcgattttagacctacccct 1149609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 31573710 - 31573773
Alignment:
Q  48 tttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcct 111  Q
    ||||| |||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  31573710 tttttttttaggcttaattatacttttggtcctaccattttgaccaactcacgaaaatagtcct 31573773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 32836114 - 32836179
Alignment:
Q  171 ctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    |||| |||||||||||| |||| ||||| |||||||||| |||||||||||  ||||||| ||||||    
T  32836114 ctacctcctattttcaa-ctcctgaaacacagagaaatgacagttttagacaattttagacctaccc 32836179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 56 - 239
Target Start/End: Complemental strand, 19359683 - 19359500
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttaggcggttttagacctacccct 19359500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 56 - 239
Target Start/End: Original strand, 5818927 - 5819110
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 5819110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 54 - 239
Target Start/End: Complemental strand, 8647987 - 8647802
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  8647987 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 8647888  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||| ||| | |||||||||||||||| ||||||||||||||| ||||||||| |||||||||| ||||||||    
T  8647887 ttgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagacctacccct 8647802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 8461477 - 8461295
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
     ||||||||||||| ||| |||||||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacccct 8461295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 54 - 239
Target Start/End: Original strand, 24331555 - 24331742
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatc--at 151  Q
    |||||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |    
T  24331555 tttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatt 24331654  T
Q  152 ttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  24331655 ttttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 24331742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 60 - 239
Target Start/End: Original strand, 2864756 - 2864935
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |  || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| |||||||||| ||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagaactacccct 2864935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 60 - 239
Target Start/End: Original strand, 14215243 - 14215422
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||| ||  | ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 14215422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 56 - 239
Target Start/End: Original strand, 18182968 - 18183151
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||| ||||||||| | || ||||||||||||||||||| ||||||||| | |||||||  ||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttaggcagttttaggcctacccct 18183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 25000635 - 25000453
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||| | ||| ||  ||||||||||||||||||| |||| |||||||||||||||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||| || |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagacggttttagatctacccct 25000453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 164191 - 164371
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||| ||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgt 164289  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||  |||||||||| ||||||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcggttttagacctacccct 164371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 57 - 237
Target Start/End: Original strand, 29454739 - 29454919
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||  |||||||||| | |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
     ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctaccc 29454919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 56 - 239
Target Start/End: Complemental strand, 16019134 - 16018951
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| ||||||| ||||||||||||| ||||||||| ||||||||||| | ||||||| ||||||||| |||| |||| ||| |||||||||||||||||    
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagacggttttagatctacccct 16018951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 15709513 - 15709335
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||| | ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||| | ||||||||| |||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    ||||||||||||||||| |||||||||||||||||| || |||||||||||| ||||||||| |||||||||| ||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttaggcggttttagacctaccc 15709335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 18183518 - 18183352
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18183518 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 18183419  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||  |||  ||| |  ||||| ||||||||||||||  |||||||||||    
T  18183418 ttgttgcatttttcgtcctac-ccctcattttattctccaaaaacgcagagaaataacagttttagac 18183352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 56 - 221
Target Start/End: Complemental strand, 2865302 - 2865138
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||| |||||||||||||||  || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  2865202 gtttcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 2865138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 8647438 - 8647600
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  8647538 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 8647600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 15372422 - 15372256
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  15372422 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattt 15372323  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||| || |||||||| ||||| |   |||| ||||||||||||||| |||||||||||    
T  15372322 ttgttgcattttttgttctacatcccatttt-attttccaaaaacgcagagaaatgacagttttagac 15372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 5819474 - 5819313
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttaga 220  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||| ||||||| ||||||||||    
T  5819374 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttaga 5819313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 56 - 221
Target Start/End: Complemental strand, 24362383 - 24362219
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  24362283 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 24362219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 19359136 - 19359298
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||| ||||| |||||    
T  19359236 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttctagac 19359298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 44 - 221
Target Start/End: Complemental strand, 29455301 - 29455125
Alignment:
Q  44 cctatttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttca 143  Q
    |||||||  ||| ||||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  29455301 cctatttaaattaaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttca 29455202  T
Q  144 attatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||||||||||||  || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  29455201 attatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 29455125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 15708966 - 15709132
Alignment:
Q  53 atttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 152  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  15708966 atttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatt 15709065  T
Q  153 tttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||| |||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  15709066 tttgttgcatatttcgtcctac-ccccatttt-attctccaaaaacgcagagaaatgacagttttagac 15709132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 60 - 218
Target Start/End: Original strand, 15371873 - 15372030
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||| ||||||| |||||| |||||||||||  | ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagtttta 218  Q
    |||||||||||| || |||||||| ||||||| |||||||||||||||||  |||||||    
T  15371972 catttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagtttta 15372030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 8460928 - 8461092
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||  |||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||| |||  || ||||| |  ||||| ||| ||||||||||| |||||||||||    
T  8461028 gttgcatttttcgtcataccccccatttt-attctccaaaaatgcagagaaatgacagttttagac 8461092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 14215791 - 14215626
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  14215791 ttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 14215692  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||| ||   || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  14215691 tgttgcatttttcgtcttaacccccatttt-attctccaaaaacgtagagaaatgacagttttagac 14215626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 164740 - 164574
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||||| ||||| ||||| |||||||||| |||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  164740 tttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattt 164641  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||| |||||||  || ||||| |  ||||| ||| | ||||||||| |||||||||||    
T  164640 ttgttgcattttttgtcctaccccccatttt-attctccaaaaatgtagagaaatgacagttttagac 164574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 56 - 221
Target Start/End: Complemental strand, 14464067 - 14463904
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||| |  || |||||||||| ||||||||||| |||||||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
     ||||||||||||||||||  || | ||| |  ||||| ||||||||||||||| |||||||||||    
T  14463967 attgcatttttcgtcctac--cccaattttattctccaaaaacgcagagaaatgacagttttagac 14463904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 24361843 - 24362017
Alignment:
Q  64 attatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 163  Q
    |||| ||||||||||| | ||||||||||||| |||||||||  || ||||||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  164 tttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||  || ||||| |  ||||| |||||||||||||||  |||||||| |||||||||| ||||||||    
T  24361943 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttaggcggttttagacctacccct 24362017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 24325218 - 24325392
Alignment:
Q  64 attatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 163  Q
    |||| ||||||||||| | ||||||||||||| |||||||||  || ||||||| ||||||||||||||| |||||||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  164 tttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||  || ||||| |  ||||| |||||||||||||||  |||||||| |||||||||| ||||||||    
T  24325318 tttcgtcctaccccccatttt-attctccacaaacgcagagaaatgatagttttagccggttttagacctacccct 24325392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 7349562 - 7349446
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||||||||||||||| |||||||||||| | ||||||| ||||||||||| ||||||||  ||||||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  158 tgcatttttcgtcctac 174  Q
    |||| ||||| ||||||    
T  7349462 tgcacttttcatcctac 7349446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 4222266 - 4222151
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| |||||||||||||||||||||| || ||||||||| | ||| |||||||||||||||||||||||  ||| |||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  159 gcatttttcgtcctac 174  Q
    ||||||||||||||||    
T  4222166 gcatttttcgtcctac 4222151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 16018588 - 16018704
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||| |  || ||||||||||||| |||||||||||||||||||||||| ||||||     
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  157 ttgcatttttcgtcctac 174  Q
    ||||||||| ||||||||    
T  16018687 ttgcattttccgtcctac 16018704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 4623148 - 4623264
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||| |||||||||| | ||||||||||| | ||||||||  |||||||||||||||||  |||||||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  158 tgcatttttcgtcctac 174  Q
     ||||||| ||||||||    
T  4623248 ggcattttccgtcctac 4623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 7348559 - 7348675
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| | ||||||||||| |||||| | |||||||||||| | ||| ||||||||||||||||||||||||  ||||||  |||||||||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  158 tgcatttttcgtcctac 174  Q
    |||| ||||||||||||    
T  7348659 tgcacttttcgtcctac 7348675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 24332095 - 24331943
Alignment:
Q  71 ttttggtcctcgtgttttggcctactcacgaaactagtcctgccctttt-aaaacagaacaaaacggtccttcaattatcat-ttttgttgca-tttttc 167  Q
    |||||||| || ||||||||| |||||||||||||  ||||||| |||| ||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  24332095 ttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgttgcattttttc 24331996  T
Q  168 gtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||  || ||| | |  ||||| ||||||||||||||| |||||||||||    
T  24331995 gtcctaccccccattct-attctccaaaaacgcagagaaatgacagttttagac 24331943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 220
Target Start/End: Original strand, 25000112 - 25000251
Alignment:
Q  80 tcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcct 179  Q
    |||||||||||||||||||||||  | ||| |||||| ||||||||||| |||| ||||||| ||||||||||||| |||||||||| |||||||  ||     
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  180 attttcaaactccagaaacgcagagaaatggcagttttaga 220  Q
    ||||| |  ||||| ||||| ||||||||| ||||||||||    
T  25000212 atttt-attctccaaaaacgtagagaaatgacagttttaga 25000251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 4219663 - 4219779
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||| |||||||||||||| ||| | || ||| | ||| |||| |||||||||||||||||   |||||| | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  158 tgcatttttcgtcctac 174  Q
    |||||||||||||||||    
T  4219763 tgcatttttcgtcctac 4219779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 6018315 - 6018429
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| | ||||||| |||||||||||  |||||||||||||| ||| || ||||||||||||||||||||   | ||||||||||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  159 gcatttttcgtcctac 174  Q
    ||| |||| |||||||    
T  6018414 gcagttttagtcctac 6018429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 6019302 - 6019189
Alignment:
Q  71 ttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat-ttttcgt 169  Q
    |||||||| || ||||||||| |||||||||||||  || ||| |||||||||||||||||||| ||| || |||||||||||||||||||| |||||||    
T  6019302 ttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcattttttcgt 6019204  T
Q  170 cctacatcctatttt 184  Q
    ||||| ||| |||||    
T  6019203 cctacctcccatttt 6019189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 14462686 - 14462769
Alignment:
Q  140 ttcaattatcatttttgttgcatttttcgtcctacatcctattttcaaactc----cagaaacgcagagaaatggcagttttag 219  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    |||||||| ||||||||| |||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttag 14462769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 4624757 - 4624654
Alignment:
Q  71 ttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 170  Q
    |||| |||||||||||||  ||||||||||||| | ||| || |  ||||||||| ||||||||  || |||||||||||||| ||||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  171 ctac 174  Q
    ||||    
T  4624657 ctac 4624654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 230
Target Start/End: Complemental strand, 41834606 - 41834434
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 155  Q
    ||||||||||| ||||||||||||||  ||||| ||  ||||||||| | ||||||||  ||| | |  ||||||||| |||| | || |||||| ||||    
T  41834606 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgtttt 41834508  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 230  Q
     ||||| |||| ||||||| |||||||||| |||||  |||||||||||||||| |||||||||||  |||||||    
T  41834507 tttgcagttttagtcctacctcctattttc-aactcttgaaacgcagagaaatgacagttttagacaattttaga 41834434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 10721873 - 10721965
Alignment:
Q  146 tatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||| ||| ||||| |||| ||||||| |||||||||||| ||||||||||| ||||||||| ||||||||| | |||||||| ||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttaggcagttttagacctacccct 10721965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 27307148 - 27307238
Alignment:
Q  146 tatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    |||||| ||| ||||| |||| ||| ||| |||||||||||| ||||||||||||| ||||||| ||||||||| | |||||||| ||||||    
T  27307148 tatcatgttttttgcagttttagtcttacctcctattttcaa-ctccagaaacgcatagaaatgacagttttaggcagttttagacctaccc 27307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 13814226 - 13814156
Alignment:
Q  109 cctgcccttttaaaacagaacaaaacggtcct-----tcaattatcatttttgttgcatttttcgtcctac 174  Q
    |||||||||||||| ||||||||||| ||| |     ||||||||||||||||||||| ||||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctac 13814156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 28494931 - 28495020
Alignment:
Q  146 tatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacc 236  Q
    |||||| ||| ||||| |||| ||||||| |||||||||| |||||||||||||||||||| || || ||||||   |||||||| |||||    
T  28494931 tatcatgttttttgcagttttagtcctacctcctattttc-aactccagaaacgcagagaagtgacaattttaggtagttttagacctacc 28495020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 22651347 - 22651505
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    |||||||| | ||||||| ||||| ||||| ||  |||||| || | ||| |||| |||||||| || ||||||||  ||||| || |||||| ||| ||    
T  22651347 cttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatca-aacaaaaccatccttaaactatcatgttt-tt 22651444  T
Q  159 gcatttttcgtcctacatcct-attttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    ||| |||| ||||||| |||| |||||||| ||||||||||||| | |||||||||||||||    
T  22651445 gcagttttagtcctacctccttattttcaa-ctccagaaacgcacaaaaatggcagttttag 22651505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 16753022 - 16752955
Alignment:
Q  151 tttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    ||||| ||||| |||| | ||||  |||||||||||| ||||||||||||||| |||||||||||||||    
T  16753022 ttttttttgcagttttagacctaactcctattttcaa-ctccagaaacgcagaaaaatggcagttttag 16752955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 28495288 - 28495225
Alignment:
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||| |||| ||||||| |||||||||||| |||||||| ||||||||||||  ||||||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaa-ctccagaaccgcagagaaatgatagttttagac 28495225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 32305916 - 32305979
Alignment:
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||| |||| ||||||| || ||||||||| |||||||||| |||||||||| |||||||||||    
T  32305916 ttgcagttttagtcctacctcttattttcaa-ctccagaaacacagagaaatgacagttttagac 32305979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 28290192 - 28290030
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||    ||||| || |||||||||| | |||||  | |||| |||  ||||||||  |||||| || ||| || |||    
T  28290192 taggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactat-atgttt 28290094  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
     ||||| |||| ||||||  |||   |||| ||||||||||||||| ||||||| |||||||||    
T  28290093 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28290030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 27307499 - 27307443
Alignment:
Q  163 ttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttaga 220  Q
    |||| ||||||| |||||||||||| ||||||||| ||||||||||| || |||||||    
T  27307499 ttttagtcctacctcctattttcaa-ctccagaaatgcagagaaatgacatttttaga 27307443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 48 - 239
Target Start/End: Complemental strand, 37727485 - 37727294
Alignment:
Q  48 tttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaatta 147  Q
    ||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  37727485 ttttttttttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaatta 37727386  T
Q  148 tcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  37727385 tcatttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 37727294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 20841107 - 20840925
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagatatacccct 20840925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 56 - 239
Target Start/End: Complemental strand, 4275911 - 4275728
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagacctacccct 4275728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 52 - 236
Target Start/End: Complemental strand, 29801967 - 29801783
Alignment:
Q  52 tatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 151  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  29801967 tatttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat 29801868  T
Q  152 ttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacc 236  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  29801867 ttttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagacggttttagacctacc 29801783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 57 - 237
Target Start/End: Original strand, 39555577 - 39555757
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 39555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 54 - 239
Target Start/End: Complemental strand, 43973989 - 43973804
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  43973989 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcattt 43973890  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  43973889 ttgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacccct 43973804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 57 - 237
Target Start/End: Original strand, 31778652 - 31778832
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 31778832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 55 - 239
Target Start/End: Original strand, 17464488 - 17464672
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||| |||| ||||| ||||||||    
T  17464588 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttaggcggtgttagacctacccct 17464672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 55 - 238
Target Start/End: Complemental strand, 5137529 - 5137346
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||| || |||||||||||||| ||||||||| ||||||||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccc 238  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  5137429 tgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccc 5137346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 48 - 230
Target Start/End: Complemental strand, 23645020 - 23644838
Alignment:
Q  48 tttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaatta 147  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||    
T  23645020 tttttttttcggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaatta 23644921  T
Q  148 tcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 230  Q
    |||||||||||||||||||| |||||| |||||||||||||||| || |||||||||||||| ||||||||| ||||||||||    
T  23644920 tcatttttgttgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttaggcggttttaga 23644838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 27393660 - 27393842
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttaggcagttttagacctacccct 27393842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 54 - 239
Target Start/End: Original strand, 22424810 - 22424995
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||| |||||||||  ||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||||||    
T  22424810 tttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcattt 22424909  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||    
T  22424910 ttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaggcggttttagacctacccct 22424995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 25853234 - 25853415
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||| ||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttaggcggttttagacctatccct 25853415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 30098309 - 30098134
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatc 232  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||| ||||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttaggcggttttagatc 30098134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 56 - 236
Target Start/End: Original strand, 26837358 - 26837538
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| ||||||| | |||||||||| || ||||||||||||||||||| | |||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacc 236  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 26837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 32534962 - 32535129
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggtttta 228  Q
    |||||||||||||| |||||||||||||||| |||| | |||||||||| ||||||||| ||||||||    
T  32535062 atttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttaggcggtttta 32535129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 56 - 222
Target Start/End: Complemental strand, 31779199 - 31779034
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacg 222  Q
    |||||||||||||||| ||  || ||||| |  ||||| ||||||||||||||| ||||||||||||    
T  31779099 gttgcatttttcgtcccaccccccatttt-attctccaaaaacgcagagaaatgtcagttttagacg 31779034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 41047218 - 41047065
Alignment:
Q  83 tgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcctatt 182  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  41047218 tgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgcatttttcgtcctacctcctatt 41047120  T
Q  183 ttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  41047119 ttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctaccc 41047065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 61 - 235
Target Start/End: Original strand, 26274570 - 26274744
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| | ||||| |||| || |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctac 235  Q
    |||||||||| ||| |||||||||||||||||||||||||||  ||||| ||||||||| | |||||||| ||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttaggcagttttagacctac 26274744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 24300560 - 24300735
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| | |||||||| |||||||||||| || |||||||||| |||||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    | ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctaccc 24300735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 58 - 221
Target Start/End: Complemental strand, 39556122 - 39555960
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  39556022 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 39555960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 55 - 221
Target Start/End: Original strand, 20840557 - 20840722
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  20840557 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttt 20840656  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||||  || ||||| |  ||||  ||||||||||||||| |||||||||||    
T  20840657 tgttgcatttttcgtcctaccccccatttt-attctccttaaacgcagagaaatgacagttttagac 20840722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 5136978 - 5137142
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| ||||||| |||||||||||||||||||||||| |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  5137078 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 5137142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 41046703 - 41046862
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  41046803 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 41046862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 24301105 - 24300939
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||||||||||| | ||||||||    
T  24301105 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcattt 24301006  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  24301005 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 24300939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 55 - 214
Target Start/End: Original strand, 48452986 - 48453144
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 48453085  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagt 214  Q
    ||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| ||||    
T  48453086 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 46 - 221
Target Start/End: Complemental strand, 32535520 - 32535342
Alignment:
Q  46 tatttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaat 145  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32535520 tattttttttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaat 32535421  T
Q  146 tatc-----atttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||     |||||||||||||||||||||||||  || ||||| |  ||||| |||||||||||||||  ||||||||||    
T  32535420 tatcattaaatttttgttgcatttttcgtcctac-ccccatttt-attctccaaaaacgcagagaaatgatagttttagac 32535342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 37726928 - 37727091
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||||||||||||| || || |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  37727028 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 37727091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 23644461 - 23644624
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||||||||||   ||||||||||    
T  23644561 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttagac 23644624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 27394123 - 27393960
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||| | ||||||  || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  27394023 ttgcattttccatcctacccccaatttt-attctccaaaaacgcagagaaataacagttttagac 27393960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 30104478 - 30104598
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| || | ||||||||||||||||||||||    
T  30104478 tttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcattt 30104577  T
Q  154 ttgttgcatttttcgtcctac 174  Q
    |||||||||||||||||||||    
T  30104578 ttgttgcatttttcgtcctac 30104598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 43973441 - 43973603
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||| |  |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||| ||||  |||||||||||    
T  43973541 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagataaataacagttttagac 43973603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 29801356 - 29801468
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  158 tgcatttttcgtc 170  Q
    |||||||||||||    
T  29801456 tgcatttttcgtc 29801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 26275119 - 26274950
Alignment:
Q  50 tttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatc 149  Q
    |||||||||| ||||||||| |||||| ||| |||||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||    
T  26275119 tttatttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatc 26275020  T
Q  150 atttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||| |||||||||||||  || ||||| |  ||||| || |||||||||||| |||||||||||    
T  26275019 atttttgttgc-tttttcgtcctaccccccatttt-attctccaaaaccgcagagaaatgacagttttagac 26274950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 26837904 - 26837739
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||| ||||||| |||||||||||||| ||||| ||||||||    
T  26837904 tttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccc-tttaaaatagaacaaaacggtcattcaagtatcattt 26837806  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||| |||||||  || ||||| |  ||||| ||| ||||||||||| |||||||||||    
T  26837805 ttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttagac 26837739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 22425354 - 22425209
Alignment:
Q  62 taattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 161  Q
    |||||| ||||||||||||||||||| |||||||||||||| || ||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  162 tttttcgtcctacatcctattttcaaactccagaaacgcagagaaat 208  Q
    |||||||||||||  || ||||| |  ||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 22425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 25853770 - 25853610
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||| |||||||||||||  |||||||||||||| ||| || | |||||||||||||||||| |||||||||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||  || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  25853670 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttagac 25853610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 59 - 174
Target Start/End: Complemental strand, 32697244 - 32697129
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||||  || ||||||||||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  159 gcatttttcgtcctac 174  Q
    ||||||||||||||||    
T  32697144 gcatttttcgtcctac 32697129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 25612519 - 25612406
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||||||||| ||| || ||||||||||||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  161 atttttcgtcctac 174  Q
    ||||||||||||||    
T  25612419 atttttcgtcctac 25612406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 17465038 - 17464874
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| | ||||||||||||||||||||||||| || |||||| |||   ||||||||||| ||||||||||||||||||||||||||||||||    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  157 ttgcatttttc-gtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||  |||||||  || ||||| |  ||||| ||| ||||||||||| |||||||||||    
T  17464938 ttgcatttttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttagac 17464874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 51474890 - 51474763
Alignment:
Q  47 atttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaatt 146  Q
    |||||| |||||||||||||| ||||||||| | ||||||||||| ||||||||||| | ||| ||||||||||||||| |||||||  |||||| | ||    
T  51474890 atttttttttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagtt 51474791  T
Q  147 atcatttttgttgcatttttcgtcctac 174  Q
    ||||||||||||||||||||||||||||    
T  51474790 atcatttttgttgcatttttcgtcctac 51474763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 23228552 - 23228427
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| |  || |||||||||||||| ||||||||  |||||||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  158 tgcatttttcgtcctacatcctatttt 184  Q
    ||||||||||||||||| ||| |||||    
T  23228453 tgcatttttcgtcctacctcccatttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 45965936 - 45966049
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||  || |||||| ||||||||||| |||||||  ||||||| |||||||||| |    
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  156 gttgcatttttcgt 169  Q
    ||||||||||||||    
T  45966036 gttgcatttttcgt 45966049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| | |||||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  159 gcatttttcgtcct 172  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 50116954 - 50116838
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||| ||||||||||||| | ||||||||||| | ||| ||||||||| ||| |||||||||||||| |||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  158 tgcatttttcgtcctac 174  Q
    |||| ||||||||||||    
T  50116854 tgcaattttcgtcctac 50116838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 25419140 - 25419242
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtcc-ttcaattatcatt 152  Q
    |||| |||| ||||||||||||||| ||||||||| || ||||||||||| |||| ||||||||||||||||||||||||| |||| |||||||||||||    
T  25419140 tttaagcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcatt 25419239  T
Q  153 ttt 155  Q
    |||    
T  25419240 ttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 37220555 - 37220673
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| | |    || ||| |||||||||||||| ||||  |||||||| |||||||||||    
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  156 gttgcatttttcgtcctac 174  Q
    |||||| ||||||||||||    
T  37220655 gttgcacttttcgtcctac 37220673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 37222118 - 37222030
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaa 144  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| ||| | |||||||| |||||||||||||||||||  ||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 18010271 - 18010176
Alignment:
Q  77 tcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcct 172  Q
    ||||| |||||| | |||||||||||| | || | ||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||    
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 25420684 - 25420574
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||| || |||| ||||| ||||||||||||| |  ||  |||||||||||| |||| ||||  ||||||||||||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  160 catttttcgtc 170  Q
    |||||||||||    
T  25420584 catttttcgtc 25420574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 27200240 - 27200076
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| |||||||||||| |  ||||| ||  ||||||||| | || |||||  ||| |||  |||||| || |||||  || |||||| ||    
T  27200240 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtt 27200142  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    | ||||| |||| ||| ||| |||||||||||| ||||||||||||||||||||| ||| |||||||    
T  27200141 ttttgcagttttagtcatacctcctattttcaa-ctccagaaacgcagagaaatgacaggtttagac 27200076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 220
Target Start/End: Complemental strand, 50901078 - 50900913
Alignment:
Q  53 atttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 152  Q
    ||||||||||||||| ||||||||||||||  ||||| ||  ||||| ||| | | ||||||  ||  |||  ||||||||| |||| | || ||| ||     
T  50901078 atttaggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atg 50900980  T
Q  153 tttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttaga 220  Q
    ||| ||||| |||| ||||||| |||||||||||| ||||| ||||||| |||||| |||||||||||    
T  50900979 ttttttgcagtttttgtcctacctcctattttcaa-ctccataaacgcaaagaaattgcagttttaga 50900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 36701645 - 36701480
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    |||| |||||||| ||||||||||||||  ||||| ||  ||||||||| | ||| || |  ||| |||  ||||||||   ||| | || |||||| ||    
T  36701645 ttagacttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgtt 36701546  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    | ||||| |||| ||| ||| |||||||||||| |||||||||| || |||||||||||||||||||    
T  36701545 ttttgcagttttagtcatacctcctattttcaa-ctccagaaacacatagaaatggcagttttagac 36701480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 221
Target Start/End: Original strand, 49407789 - 49407957
Alignment:
Q  51 ttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatca 150  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||  ||||||||| | ||| ||||  ||| ||| |||||||||| |||| | || | | |    
T  49407789 ttatttaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaact-tta 49407887  T
Q  151 tttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    | |||  | || |||| ||| ||| |||||||||| ||||||| ||||||||||||||| || ||||||||    
T  49407888 tgttttgtacagttttagtcatacctcctattttc-aactccaaaaacgcagagaaatgacaattttagac 49407957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 55192222 - 55192279
Alignment:
Q  163 ttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||    
T  55192222 ttttagtcctacctcctattttcaa-ctccagaaacgcagagaaatgacagttttagac 55192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 32695706 - 32695817
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| | ||||||||||| | |||||||||||| |||||| |  |  || | ||||||||||||||||||  ||||| | ||||| |||||||||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  161 atttttcgtcct 172  Q
    | |||| |||||    
T  32695806 aattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 37075781 - 37075850
Alignment:
Q  151 tttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||| ||||| |||| ||||||| || ||||||||| ||||||||||||||||||||| | |||||||||    
T  37075781 ttttttttgcagttttagtcctacctcttattttcaa-ctccagaaacgcagagaaatgaccgttttagac 37075850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 23227261 - 23227370
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||| ||||| ||||||||||   |||||||||| ||||||||||| | |||||       | ||||||||||||   ||||| ||||| |||||||||    
T  23227261 aggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttttg 23227354  T
Q  157 ttgcatttttcgtcct 172  Q
    ||||||||||||||||    
T  23227355 ttgcatttttcgtcct 23227370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 37076133 - 37076049
Alignment:
Q  146 tatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 230  Q
    |||||| ||| || ||||||| ||| ||| | |||||||  ||||| ||||||| ||||||||||||||||||| | ||||||||    
T  37076133 tatcatgttttttacatttttagtcttaccttctattttttaactctagaaacgtagagaaatggcagttttaggcagttttaga 37076049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 51827956 - 51828117
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcct-gcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    ||||||||||| |||||||||||| |  ||||| || |||||||||| | ||||| || |||||||| | ||||||||  |||| | || ||| || |||    
T  51827956 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgttt 51828053  T
Q  156 gttgcatttttcgtccta-catcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
     |||||||||| |||||| |  ||||||||| ||||||||||||||| | ||||| |||||||||    
T  51828054 tttgcatttttagtcctatctccctattttc-aactccagaaacgcacataaatgacagttttag 51828117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 8873784 - 8873850
Alignment:
Q  152 ttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    |||| ||||| |||| ||| ||| |||||||||||| || |||||||||||||||||| |||||||||    
T  8873784 tttttttgcagttttagtcttacctcctattttcaa-cttcagaaacgcagagaaatgacagttttag 8873850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 219
Target Start/End: Original strand, 55389603 - 55389765
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    ||||| |||||| |||||||||||||   ||| | || |||||||||| | ||||| || |||| |||  ||||||||  |||||| || ||| || |||    
T  55389603 taggcataattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactat-atgttt 55389701  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
     ||||| |||| ||||||  |||   |||| ||||||||||||||| ||||||| |||||||||    
T  55389702 tttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 55389765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 22370599 - 22370757
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| ||||||||||||||  ||||| || |||||||||| | ||||| || |||| ||||  |||||||  |||| | || |||   |||| ||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    | |||| ||||||  ||||  | || ||||||||||||||| ||||||  |||||||||    
T  22370699 agttttagtcctatctccttatctccaactccagaaacgcacagaaataacagttttag 22370757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 221
Target Start/End: Complemental strand, 49408201 - 49408167
Alignment:
Q  187 aactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||| |||||||||||||||||||    
T  49408201 aactccagaaacgcaaagaaatggcagttttagac 49408167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 2323466 - 2323538
Alignment:
Q  146 tatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    |||||| ||| ||||| |||| ||||||| |||||||||| |||||||||||| | || ||||| |||||||||    
T  2323466 tatcatgttttttgcaattttagtcctacctcctattttc-aactccagaaacacggataaatgacagttttag 2323538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 7989500 - 7989463
Alignment:
Q  14 agcacataaggtactttacctaagttttctcctatttt 51  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  7989500 agcacatatggtactttacctaagttttctcctttttt 7989463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 27199796 - 27199864
Alignment:
Q  152 ttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||| ||||| |||| || ||||||||||||||| ||||| ||||||||||| ||||  |||||||||||    
T  27199796 tttttttgcagttttagtgctacatcctattttc-aactctagaaacgcagataaatatcagttttagac 27199864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 32730812 - 32730775
Alignment:
Q  182 tttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  32730812 tttcaaactccagaaacgcacagaaatgacagttttag 32730775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 52237366 - 52237203
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||| |||||||| |||||||||||||   ||||| || |||||||||| | ||||| || |||||||| | ||||||||  |||| | |||||| || |    
T  52237366 ttagccttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatc-gaacaaaatcgtccctaaattat-atgt 52237269  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    || ||||| |||| ||||||  |||   |||| |||||| |||||||| ||||||| |||||||||    
T  52237268 tttttgcagttttagtcctatctccctatttctaactccggaaacgcacagaaatgacagttttag 52237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 30518151 - 30518183
Alignment:
Q  14 agcacataaggtactttacctaagttttctcct 46  Q
    ||||||||||||| |||||||||||||||||||    
T  30518151 agcacataaggtaatttacctaagttttctcct 30518183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 52375880 - 52375832
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaa 103  Q
    ||||||||||||| ||||||||||||||  ||||| || ||||||||||    
T  52375880 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaa 52375832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 55 - 239
Target Start/End: Complemental strand, 2215 - 2031
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2116  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||||    
T  2115 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacccct 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 1665 - 1829
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  1765 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 1829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 3e-78; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 52 - 239
Target Start/End: Complemental strand, 43058883 - 43058697
Alignment:
Q  52 tatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 151  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||     
T  43058883 tatttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca- 43058785  T
Q  152 ttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  43058784 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacccct 43058697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 18450829 - 18451011
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||     
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 18451011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 51 - 239
Target Start/End: Complemental strand, 22374877 - 22374689
Alignment:
Q  51 ttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatca 150  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||    
T  22374877 ttatgtaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatca 22374778  T
Q  151 tttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||| || |||||    
T  22374777 tttttgttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttaggcggttttagaccttcccct 22374689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 61 - 237
Target Start/End: Complemental strand, 40027682 - 40027506
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttaggcggttttagacctaccc 40027506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 60 - 239
Target Start/End: Original strand, 40815347 - 40815526
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 40815526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 28617160 - 28616978
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattttagacctacccct 28616978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 54 - 235
Target Start/End: Complemental strand, 7446895 - 7446714
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| | ||||| ||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7446895 tttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 7446796  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctac 235  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| |||||||||| ||||    
T  7446795 ttgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttagacctac 7446714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 239896 - 239725
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  159 gcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 230  Q
    || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttaga 239725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 26538628 - 26538461
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26538628 tttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcattt 26538529  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||  || |||||||||| ||||||||||||||||||| |||||||||||    
T  26538528 ttgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagac 26538461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 11091067 - 11090886
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||| ||||| || |||||| |||||||||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttaggcggttttagacctaccc 11090886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 56 - 236
Target Start/End: Complemental strand, 1978656 - 1978476
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacc 236  Q
    ||||||||||| ||||||| |||||||||||||||| |||||| || ||||||||||||||||  |||||||||| |||||    
T  1978556 gttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagttttatgcggttttagacctacc 1978476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 11090519 - 11090683
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  11090619 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 11090683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 8425358 - 8425533
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||| |||||||||||||||||||||| | ||| | || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgc 8425456  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||  |||||||||| ||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcggttttagacctaccc 8425533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 3026006 - 3025829
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||| | || |||||||||||||||| |||||||||||||||||||||| ||||||||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||  ||| |||||| ||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcgggtttagacctaccc 3025829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 55 - 221
Target Start/End: Original strand, 239350 - 239514
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  239449 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 239514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 22374318 - 22374482
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| ||||||| |||||||  ||||||||||    
T  22374418 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgatagttttagac 22374482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 54 - 237
Target Start/End: Complemental strand, 14432690 - 14432507
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    ||||| |||||||| | |||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||| |||| ||| |||||||||| ||||    
T  14432690 tttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattattt 14432591  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||  |||||| ||||||    
T  14432590 ttgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcgaatttagacctaccc 14432507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 40815894 - 40815728
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||    
T  40815894 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcattt 40815795  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  40815794 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 40815728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 40027139 - 40027302
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||| |||||||   | ||||| |  ||||| ||||||||||||||| |||||||||||    
T  40027239 ttgcattttttgtcctaccctccatttt-attctccaaaaacgcagagaaatgacagttttagac 40027302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 18451380 - 18451214
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||| ||||||||    
T  18451380 tttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcattt 18451281  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||| ||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  18451280 ttgttgcatttttcttcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 18451214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 28616613 - 28616776
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||| ||||||||||||  || |||||   |  | | |||||||||||||| ||||||||||||    
T  28616713 tgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagac 28616776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 1978106 - 1978270
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| | |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||| |||||    || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  1978206 gttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttagac 1978270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 26538096 - 26538259
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||  || ||||| |  ||||| |||| |||||||||  |||||||||||    
T  26538196 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaataacagttttagac 26538259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 20444748 - 20444865
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  157 ttgcatttttcgtcctac 174  Q
    ||||| ||||||||||||    
T  20444848 ttgcagttttcgtcctac 20444865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 20440580 - 20440461
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  20440580 tttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcattt 20440481  T
Q  154 ttgttgcatttttcgtccta 173  Q
    |||||||| |||||||||||    
T  20440480 ttgttgcagttttcgtccta 20440461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 43058333 - 43058495
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||| |||||||||||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||| ||||  || ||||| |  ||||| ||||| ||||||||| |||||||||||    
T  43058433 tgcatttttcgttctaccccccatttt-attctccaaaaacgtagagaaatgacagttttagac 43058495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 28847242 - 28847124
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| | |||||||||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  156 gttgcatttttcgtcctac 174  Q
    |||||||||||||||||||    
T  28847142 gttgcatttttcgtcctac 28847124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 14432145 - 14432304
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| | |||||||||||||||||| |||||||||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||| |||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  14432245 atttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 14432304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 3025479 - 3025582
Alignment:
Q  71 ttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 170  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3025479 ttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatttttcgtc 3025578  T
Q  171 ctac 174  Q
    ||||    
T  3025579 ctac 3025582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 61 - 221
Target Start/End: Complemental strand, 8425902 - 8425743
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| ||||||||| || ||||||||| |||||||||||| | ||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||| |||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  8425802 atttttcgtcttacccccaatttt-attctccaaaaacgcagagaaatgacagttttagac 8425743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 59 - 173
Target Start/End: Complemental strand, 35781207 - 35781093
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  159 gcatttttcgtccta 173  Q
    |||||||||||||||    
T  35781107 gcatttttcgtccta 35781093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 215
Target Start/End: Original strand, 7446341 - 7446497
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||| |||||||||||||| ||||||| |||| | |||||||||||||||||||||||||||||||| ||||||||||||||||     
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagtt 215  Q
    |||||||||||||| |||  || ||||| |  ||||| ||||||||||||||| |||||    
T  7446441 ttgcatttttcgtcatac-ccccatttt-attctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 35779708 - 35779824
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||||||||||||||| | ||||||||||| | |||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  158 tgcatttttcgtcctac 174  Q
    ||||||||| |||||||    
T  35779808 tgcattttttgtcctac 35779824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 8972239 - 8972363
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||||||||||||||||||| | ||||||||| | ||| |||||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  160 catttttcgtcctacatcctatttt 184  Q
    |||||||||| ||||  ||||||||    
T  8972339 catttttcgttctaccccctatttt 8972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 15551501 - 15551612
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||||||||||||||||||  ||||||||||| | ||| |||| |||||||||| |||||||  |||||||| |||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  160 catttttcgtcc 171  Q
    ||||||||||||    
T  15551601 catttttcgtcc 15551612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 15552596 - 15552483
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| |||||||||| |  ||||||||||||||||||||| |  ||| ||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  160 catttttcgtcctac 174  Q
     ||||||||||||||    
T  15552497 tatttttcgtcctac 15552483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 28143578 - 28143414
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||  ||||||||||||||  ||||| ||  ||||||||| | ||||||||  ||| |||  ||||||||  |||| | || |||||| ||    
T  28143578 ttaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtt 28143479  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    | ||||| |||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||    
T  28143478 t-ttgcagttttagtcctacgtcctattttcaa-ctccagaaacgcagagaaatgacagttttagac 28143414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 221
Target Start/End: Complemental strand, 14942394 - 14942228
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcat--tt 153  Q
    |||||||||||| |||||||||| |||  ||||| ||  ||||||||| | ||| || |  ||| |||  ||||||||  |||| | |||||||||  ||    
T  14942394 taggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttt 14942295  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    || ||||| |||| |||||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  14942294 tttttgcagttttagtcctacatcctattttcaa-ctccagaaatgcagagaaatcgcagttttagac 14942228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 31797324 - 31797166
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||||   ||||| ||  ||||||||| | ||| ||||  ||| |||  ||||||||| |||| | || ||| || |||     
T  31797324 aggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtttt 31797226  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagtttt 217  Q
    ||||| |||| ||||||| |||||||||||| ||| ||||||||||||||||| |||||||    
T  31797225 ttgcagttttagtcctacctcctattttcaa-ctctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 219
Target Start/End: Complemental strand, 20128293 - 20128123
Alignment:
Q  48 tttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcc-cttttaaaacagaacaaaacggtccttcaatt 146  Q
    ||||| |||||||||||||| |||||||||||| |  ||||  || |||||||||| | ||||| || |||||||| || |||||||  |||||| || |    
T  20128293 tttttttttaggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatca-aacaaaatcgtccttaaact 20128195  T
Q  147 atcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    || || ||| ||||| |||| ||||||  |||   |||| ||||||||||||||| | ||||| |||||||||    
T  20128194 at-atgttttttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttag 20128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 219
Target Start/End: Original strand, 62953 - 63117
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| |||| |||||||    ||||| || |||||||||| | ||||| || ||||||||  ||||||||  |||||| || ||| || |    
T  62953 tttaggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactat-atgt 63051  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttag 219  Q
    || ||||| |||| ||||||  |||   |||| ||||| ||||||||| | ||||| |||||||||    
T  63052 tttttgcagttttagtcctatctccctatttccaactcaagaaacgcacataaatgacagttttag 63117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 32418711 - 32418670
Alignment:
Q  39 tttctcctatttttatttaggcttaattatacttttggtcct 80  Q
    |||||||| ||| | |||||||||||||||||||||||||||    
T  32418711 tttctcctttttatttttaggcttaattatacttttggtcct 32418670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 60 - 239
Target Start/End: Complemental strand, 17433758 - 17433579
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacggttttagacctacccct 17433579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 59 - 239
Target Start/End: Original strand, 5539817 - 5539997
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  159 gcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    | |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttaggcggttttagacctacccct 5539997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 56 - 239
Target Start/End: Original strand, 50970276 - 50970459
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttttggcggttttagacctacccct 50970459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 18984665 - 18984483
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984566  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||| |||||||||| || |||||    
T  18984565 ttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttaggcggttttagaccttcccct 18984483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 54 - 239
Target Start/End: Original strand, 21856038 - 21856223
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    ||||| |||||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21856038 tttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 21856137  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||| |||||  |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  21856138 ttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacccct 21856223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 33143914 - 33144098
Alignment:
Q  57 aggcttaattatac--ttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33143914 aggcttaattatacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 33144013  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    | |||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  33144014 ttttgcatatttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacccct 33144098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 56 - 239
Target Start/End: Original strand, 15646190 - 15646373
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||| || ||||||||||||||| ||| ||||||||||| ||||||||| |||||||||| ||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttaggcggttttagacctacccct 15646373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 58 - 221
Target Start/End: Complemental strand, 29307487 - 29307324
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 29307324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 29870164 - 29869985
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||| ||||||||| |||||||||| ||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttaggcggttttagacctaccc 29869985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 39154566 - 39154384
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||| || |||||| |||||||||| ||||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttaggcggttttagacctacccct 39154384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 59 - 239
Target Start/End: Original strand, 8678542 - 8678722
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  159 gcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    |||||||||||||||| | ||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||  |||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttaggcggttttagacatacccct 8678722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 56 - 239
Target Start/End: Complemental strand, 15173640 - 15173458
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||||||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||||||||| ||||||||| |||||||||| ||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttaggcggttttagacctacccct 15173458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 59 - 239
Target Start/End: Complemental strand, 4636515 - 4636335
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  159 gcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||| || |||||  || ||||||| ||||||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcgattttagacctacccct 4636335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 58 - 230
Target Start/End: Original strand, 26859059 - 26859231
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 230  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||| |   |||||||| ||||||||||    
T  26859159 tgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttaggcggttttaga 26859231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 9019512 - 9019345
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||||| || ||||| ||||||||||||||||||||||| ||||||||||||||    
T  9019512 tttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcattt 9019413  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||  |||||||||||    
T  9019412 ttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagac 9019345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 50970824 - 50970661
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  50970724 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 50970661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 56 - 221
Target Start/End: Original strand, 18984117 - 18984281
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| |||||||||||||||  ||||||||||    
T  18984217 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgatagttttagac 18984281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 5540364 - 5540201
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  5540264 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 5540201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 57 - 221
Target Start/End: Complemental strand, 15646741 - 15646578
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  15646641 ttgcatttttcgtcctacccccaatttt-attctccaaaaacgcagagaaatgacagttttagac 15646578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 29869619 - 29869782
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  29869719 ttgcatttttcgtcctacaccccatttt-attctccaaaaacgcagagaaatgacagttttagac 29869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 5962579 - 5962748
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| | |||||||||||||||| ||| ||| |||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  159 gcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggtttta 228  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttaggcggtttta 5962748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 15173099 - 15173258
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  15173199 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 15173258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 29306953 - 29307115
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  29307053 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 29307115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 51 - 221
Target Start/End: Complemental strand, 8679093 - 8678925
Alignment:
Q  51 ttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatca 150  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||||    
T  8679093 ttattttggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatca 8678994  T
Q  151 tttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||||| ||| ||||| |  ||||| ||| ||||||||||| |||||||||||    
T  8678993 tttttgttgcatttttcgtcctacctcc-atttt-attctccaaaaatgcagagaaatgacagttttagac 8678925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 33144462 - 33144302
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  33144362 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 33144302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 221
Target Start/End: Complemental strand, 21856588 - 21856426
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  21856488 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttagac 21856426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 9018969 - 9019122
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||    
T  9018969 tttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcattt 9019068  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaat 208  Q
    |||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||    
T  9019069 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 9019122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 26859606 - 26859488
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  156 gttgcatttttcgtcctac 174  Q
    |||||||||||||||||||    
T  26859506 gttgcatttttcgtcctac 26859488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 61 - 221
Target Start/End: Complemental strand, 5963120 - 5962961
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  5963020 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 5962961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 46 - 221
Target Start/End: Original strand, 17433204 - 17433378
Alignment:
Q  46 tatttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaat 145  Q
    |||| |||||| |||||||||| ||||||||||||| |||||||||||||||| ||||||   | ||||||||||||||||||||||||||||||||||     
T  17433204 tattattattttggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaag 17433303  T
Q  146 tatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||| ||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  17433304 tatcatttttgttgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 17433378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 17112282 - 17112462
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| ||||||||| ||| |||||||  ||||||| |||| | ||   |||||||||||| |||| ||||  |||||||||||||||||||| |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||  |||||||| |||||||||| ||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttaggcggttttagacctacccct 17112462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 39154021 - 39154181
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| |||||||||| || ||||||||| |||||||||||||  || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||  || ||| | |  ||||| ||||||| ||||||| |||||||||||    
T  39154121 catttttcgtcctaccccccattct-attctccaaaaacgcatagaaatgacagttttagac 39154181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 52268289 - 52268406
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||||| | |||||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  157 ttgcatttttcgtcctac 174  Q
    ||||| ||||||||||||    
T  52268389 ttgcacttttcgtcctac 52268406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 144
Target Start/End: Complemental strand, 2733506 - 2733416
Alignment:
Q  54 tttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaa 144  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||| | ||||||||||||||||||||||||||||||||||||||    
T  2733506 tttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| ||||||||||||||||||||| | |||||| ||||   || ||||||||||||||||||||||||  ||| |||| |||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  160 catttttcgtcctac 174  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 47827108 - 47827033
Alignment:
Q  83 tgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||||||  |||||| ||||||||||||||||    
T  47827108 tgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaa 133  Q
    |||||||| |||||||||||||||||||||| |||||||||||| | ||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 44802726 - 44802555
Alignment:
Q  49 ttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattat 148  Q
    |||| |||||||||||||| |||||||||||| |  ||||| ||  ||||||||| | ||| ||||  ||| |||| ||||||||  |||| | || |||    
T  44802726 ttttttttaggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactat 44802627  T
Q  149 catttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||| ||| ||||| |||| || |||| |||||||||| |||||||||||| |||| ||||| || ||||||||    
T  44802626 catgttttttgcagttttagttctacctcctattttc-aactccagaaacacagaaaaatgacaattttagac 44802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 221
Target Start/End: Original strand, 4636033 - 4636134
Alignment:
Q  118 ttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagtttt 217  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| || ||||  || ||||| |  || || ||||||||||||||| |||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccatttt-attcttcaaaaacgcagagaaatgacagtttt 4636130  T
Q  218 agac 221  Q
    ||||    
T  4636131 agac 4636134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 17088243 - 17088312
Alignment:
Q  151 tttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||| ||||| |||| ||||||| |||||||||||| || |||||| |||||||||||||||||||||||    
T  17088243 ttttttttgcaattttagtcctacctcctattttcaa-cttcagaaatgcagagaaatggcagttttagac 17088312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 17088688 - 17088524
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 153  Q
    ||||||||||||| |||||||||||||   |||||  |  ||||||||| | ||| |||| |||| ||| || |||||||| |||| | || ||| || |    
T  17088688 ttaggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatca-aacaaaaccgtccctaaactat-atat 17088591  T
Q  154 ttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    || ||||| |||| || |||| ||||||||||||| || ||||||||||||||||| |||||||||||    
T  17088590 tttttgcagttttagttctacctcctattttcaaa-tctagaaacgcagagaaatgacagttttagac 17088524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 9833698 - 9833549
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    ||||||||| |||||||| |||| ||  |||| || |||||||||| ||||| ||||  ||| |||  ||||||||  |||| | || ||| || ||| |    
T  9833698 ggcttaattgtacttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgttttt 9833599  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaat 208  Q
    |||| |||| |||||||  ||||||||| ||||||||||||||| ||||||    
T  9833598 tgcagttttagtcctaccccctattttc-aactccagaaacgcacagaaat 9833549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 45048594 - 45048533
Alignment:
Q  146 tatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaat 208  Q
    |||||| ||| ||||| |||| ||||||| |||||||||||| ||||||||||||||||||||    
T  45048594 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgcagagaaat 45048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 44291769 - 44291701
Alignment:
Q  146 tatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagtt 215  Q
    |||||| ||| ||||| |||| |||||||  ||||||||||| |||||||||| || |||||||||||||    
T  44291769 tatcatgttttttgcagttttagtcctaccccctattttcaa-ctccagaaacacatagaaatggcagtt 44291701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtcc 139  Q
    |||||||||  |||||||||| |||  ||| | || |||||||||| | |||||||| ||||||||  ||||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 45048253 - 45048316
Alignment:
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||| |||| ||||||| || ||||||||| ||||||||||||| ||||||  |||||||||||    
T  45048253 ttgcagttttagtcctacctcatattttcaa-ctccagaaacgcatagaaataacagttttagac 45048316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 144; Significance: 8e-76; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 11168 - 10989
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 157  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  158 tgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctaccc 237  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||| |||||||||| ||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttaggcggttttagacctaccc 10989  T

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Target: scaffold0417; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 10640 - 10784
Alignment:
Q  77 tcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacat 176  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||      
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  177 cctattttcaaactccagaaacgcagagaaatggcagttttagacg 222  Q
     | ||||| |  ||||| ||| ||||||||||| ||||||||||||    
T  10740 tccatttt-attctccaaaaatgcagagaaatgacagttttagacg 10784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 1291 - 1123
Alignment:
Q  53 atttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 152  Q
    |||| |||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1291 attttggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 1192  T
Q  153 tttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  1191 tttgttgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagac 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 60 - 221
Target Start/End: Original strand, 755 - 914
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||  || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  854 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttagac 914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 120; Significance: 2e-61; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 64847 - 64672
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacc 236  Q
    |||||||||||||  | |||||||||||||||||||||| ||| ||||  ||||||||| |||||||||| |||||    
T  64747 atttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttaggcggttttagacctacc 64672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 64301 - 64464
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||| |||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  64401 ttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 64464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 205911 - 205752
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| |||||| ||||||   ||||| || |||||||||| | ||||||||  ||| |||  ||||||||| |||| | || |||||| ||| |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    || |||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||||    
T  205812 cagttttagtcctacgtcctattttcaa-ctccaaaaacgcagagaaatggcagttttagac 205752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 205038 - 205112
Alignment:
Q  146 tatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||| ||| ||||| |||| ||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  205038 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctctagaaacacagagaaatggaagttttagac 205112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 55 - 221
Target Start/End: Original strand, 4790 - 4955
Alignment:
Q  55 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 154  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  155 tgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  4890 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttagac 4955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 60 - 230
Target Start/End: Complemental strand, 5334 - 5168
Alignment:
Q  60 cttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 159  Q
    |||||||| |||||||||||||||||||||||||| |||||||||| ||| || ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  160 catttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttaga 230  Q
    ||||||||||||    |||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  5234 catttttcgtcc----tcctattttcaaactccagaaacgcagaaaaatgacagttttaggcggttttaga 5168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 134224 - 134056
Alignment:
Q  52 tatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 151  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| |||    
T  134224 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacat 134125  T
Q  152 ttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  134124 ttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 134056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 17024 - 16860
Alignment:
Q  75 ggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctac 174  Q
    ||||||||||||||| | |||||||||||||  ||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  175 atcctattttcaaactccagaaacgcagagaaatggcagttttagacggttttagatctacccct 239  Q
     |||||||||||||||||||||||||||||||||  ||||||||| || ||||||| ||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacccct 16860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 16564 - 16658
Alignment:
Q  126 gaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 16658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 221
Target Start/End: Complemental strand, 4754 - 4590
Alignment:
Q  56 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  156 gttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||||||||||  || ||||| |  ||||| |||| |||||||||| |||||||||||    
T  4654 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttagac 4590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 97 - 239
Target Start/End: Original strand, 4242 - 4384
Alignment:
Q  97 cacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcctattttcaaactccagaa 196  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | ||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  197 acgcagagaaatggcagttttagacggttttagatctacccct 239  Q
    | ||||||||||| ||||||||| |||||||||| ||||||||    
T  4342 atgcagagaaatgacagttttaggcggttttagacctacccct 4384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 42172 - 42332
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||| || |||||||||||| ||| ||||||||||  ||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||| ||| ||| ||||||||||||||| |||||||||||||||||| |||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 42332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 221
Target Start/End: Complemental strand, 42714 - 42542
Alignment:
Q  47 atttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaatt 146  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||  | |||||||||||||||||||||||||||||||||| ||    
T  42714 atttatatttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagtt 42615  T
Q  147 atcatttttgttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    |||||||||||| |||||||||||||||  || ||||| |  ||||| ||||||||||||||| |||||||||||    
T  42614 atcatttttgtttcatttttcgtcctac-ccccatttt-attctccaaaaacgcagagaaatgacagttttagac 42542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 10414 - 10301
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  161 atttttcgtcctac 174  Q
    ||||||||||||||    
T  10314 atttttcgtcctac 10301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 9935 - 10100
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| | |||||||||||||||||| ||||| ||||||||||  || ||||||||||| | ||||||||| |||||||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  161 atttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagacggtttta 228  Q
    | ||||| |||||| |||||||||||||||| ||||||| ||||||||| || |||||| ||||||||    
T  10035 a-ttttcatcctacctcctattttcaaactcaagaaacg-agagaaatgacaattttaggcggtttta 10100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  58 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 155  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 18834 - 18996
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    |||||| |||| ||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  157 ttgcatttttcgtcctacatcctattttcaaactccagaaacgcagagaaatggcagttttagac 221  Q
    ||||||||||| ||||||  || ||||| |  ||||| ||||||||||||||  |||||||||||    
T  18934 ttgcatttttcatcctac-ccccatttt-attctccaaaaacgcagagaaataacagttttagac 18996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 57 - 172
Target Start/End: Complemental strand, 28789 - 28674
Alignment:
Q  57 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 156  Q
    |||| |||||| |||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  157 ttgcatttttcgtcct 172  Q
    ||||| ||||||||||    
T  28689 ttgcagttttcgtcct 28674  T

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Target: scaffold1585 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 568 - 679
Alignment:
Q  59 gcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 158  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| |  || |||||||||||||||||||||||| |||||||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  159 gcatttttcgtc 170  Q
    | ||||||||||    
T  668 gtatttttcgtc 679  T

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Target: scaffold1696 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 462 - 566
Alignment:
Q  71 ttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 170  Q
    |||||||| |||||||||||||||||||||||| | ||| ||  ||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||    
T  462 ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgcatttttcgtc 561  T
Q  171 ctaca 175  Q
    |||||    
T  562 ctaca 566  T

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Target: scaffold0076 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| |||||||||| || |||||||| ||||| |||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  161 a 161  Q
    |    
T  8451 a 8451  T

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Target: scaffold0057 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 62000 - 61887
Alignment:
Q  61 ttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 160  Q
    ||||||| ||||||| |||||||||||||| |||||||||||| | ||||| ||||||||||| |||||||||   || ||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  161 atttttcgtcctac 174  Q
    ||||||||||||||    
T  61900 atttttcgtcctac 61887  T

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Target: scaffold0057; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 61019 - 61102
Alignment:
Q  49 ttttatttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaa 132  Q
    |||||| ||||||||| || ||||||| ||||||||||||||||||||||||||| |  ||||||| |||||||| ||||||||    
T  61019 ttttatataggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold0168 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 7784 - 7707
Alignment:
Q  107 gtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcctacatcctatttt 184  Q
    ||||| |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||  ||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctatttt 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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