View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9308_low_87 (Length: 225)
Name: NF9308_low_87
Description: NF9308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9308_low_87 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 36281216 - 36281425
Alignment:
| Q |
1 |
tttgtcaaatggaattaaataccatgtactatttcacctaaactatagttttagcaattttattcaactagtttattagccaaagtcgatttataatcct |
100 |
Q |
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| T |
36281216 |
tttgtcaaatggaattaaataccatgtactatttcacctaaactatagttttagcaattttattcaactagtttattagccaaagtcgatttataatcct |
36281315 |
T |
|
| Q |
101 |
aacaattgttaattgaaataaaataagccgtcaaatctcattaatatttcattttttgtagacatcatttatatgtaaaaactagcccatagacccaaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36281316 |
aacaattgttaattgaaataaaataagccgtcaaatctcattaatatttcattttttgtagacatcatttatatgtaaaaactagcccatagacccaaca |
36281415 |
T |
|
| Q |
201 |
cggcgtggtg |
210 |
Q |
| |
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|||||||||| |
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| T |
36281416 |
cggcgtggtg |
36281425 |
T |
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