View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9309_low_14 (Length: 226)
Name: NF9309_low_14
Description: NF9309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9309_low_14 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 11 - 226
Target Start/End: Original strand, 11733764 - 11733979
Alignment:
| Q |
11 |
cataggaaacaacacaaattcaacattgataaaaaagaaataggatgaataagcnnnnnnnctcacagcataaaacggaaaaattaccttgcaagcaatc |
110 |
Q |
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| T |
11733764 |
cataggaaacaacacaaattcaacattgataaaaaagaaataggatgaataagcaaaaaaactcacagcataaaacggaaaaattaccttgcaagcaatc |
11733863 |
T |
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| Q |
111 |
ataattttctcgaaaacaacaccagttcaacatttaatcatttaatatttgctactaaaaaacgatatttattcgtacaaatcaaatagaatacatcaaa |
210 |
Q |
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| T |
11733864 |
ataattttctcgaaaacaacaccagttcaacatttaatcatttaatatttgctactaaaaaacgatatttattcgtacaaatcaaatagaatacatcaga |
11733963 |
T |
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| Q |
211 |
tacaacacaaattcaa |
226 |
Q |
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| T |
11733964 |
tacaacacaaattcaa |
11733979 |
T |
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