View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9309_low_6 (Length: 310)
Name: NF9309_low_6
Description: NF9309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9309_low_6 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 283; Significance: 1e-158; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 4575033 - 4574735
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4575033 |
gatgttatgaatgctttctattctatgttcccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaatgacttgacatctt |
4574934 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574933 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggattgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
4574834 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574833 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
4574735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 4561229 - 4560932
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
4561229 |
gatgttatgaatgctttctattctatgttcccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaatcacttgacatctt |
4561130 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4561129 |
tagactgtaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcactgt |
4561030 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|| ||||| |||||||| | ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4561029 |
taagtctcaagagaagc-cttagagtttgcttggggtttggccaacagcaagaaaccatttttatggatcattaggcctgatcttgtcattggtggctc |
4560932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 31 - 299
Target Start/End: Original strand, 4489792 - 4490060
Alignment:
| Q |
31 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
130 |
Q |
| |
|
|||||| ||||||||||||| ||||| |||||||| || |||||| |||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4489792 |
ccttctgtatacacaattggcccattttcttcttttttagatcaaattccagaaaatcacttgaaatctttagactctaatctttggaaagaagatacta |
4489891 |
T |
|
| Q |
131 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4489892 |
aatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctattagagtttgc |
4489991 |
T |
|
| Q |
231 |
ttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4489992 |
atggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgttattggtggctc |
4490060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 4266573 - 4266871
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
||||||||||||||| |||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
4266573 |
gatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaaatcacttggcatctt |
4266672 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
|| | || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
4266673 |
taaattccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggtagcatcacagt |
4266772 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4266773 |
tatgtcacgagagaagctcttagagtttgcttggggtttggccaacagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctc |
4266871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 31 - 299
Target Start/End: Original strand, 4503834 - 4504102
Alignment:
| Q |
31 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4503834 |
ccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
4503933 |
T |
|
| Q |
131 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
230 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||| || | |||||||||| |
|
|
| T |
4503934 |
aatgtcttgattggcttgaattaaaagaaccaggatctgttgtttatgtaaattttggcagcattacagttatgtcttaagataaattgttagagtttgc |
4504033 |
T |
|
| Q |
231 |
ttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4504034 |
ttggggtttggccaatagcaagaaaccttttttgtggattattaggcctgatcttgttattggtggctc |
4504102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 4481418 - 4481120
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
|||||||||||| || |||||||| | || |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || ||||| | | | |
|
|
| T |
4481418 |
gatgttatgaattctctctattctatattcccttctctatacaccattggtccattggcttcttttttaaatcaaagtccacaatatcacttggaaacat |
4481319 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |
|
|
| T |
4481318 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcacaat |
4481219 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||||| |||||| ||| ||||||||||||||||||| ||||| ||||||||| |||||||||||| |||||| || ||||||||||||||||||| |
|
|
| T |
4481218 |
tatgtctcaagagaaactcttagagtttgcttggggttttgccaatagcaaaaaaaactttttgtggattattaggtctaatcttgtcattggtggctc |
4481120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 31 - 299
Target Start/End: Complemental strand, 3172436 - 3172168
Alignment:
| Q |
31 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
130 |
Q |
| |
|
||||||||||||||||||||||| || ||||| ||| ||| ||||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
3172436 |
ccttctctatacacaattggtccgttcgcttcgtttttaagtcaaagtccgcaaaatcacttggcatctttagattctaatctttggaaagaagatacta |
3172337 |
T |
|
| Q |
131 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
230 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||| |
|
|
| T |
3172336 |
aatgtcttgaatggcttgaaacaaaagaatcaaaatctgttgtttatgtaaattttggcagcatcatagttatgtctcaagagaaattattagagtttgc |
3172237 |
T |
|
| Q |
231 |
ttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3172236 |
ttggggtttagccaacagcaagaaaccctttttgtggattattaggcctgatcttgtcattggtggctc |
3172168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 4458320 - 4458021
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
|||||||||||| || |||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
4458320 |
gatgttatgaatactctctactctatgttcccttctatatacaccattggcccatttgcttcttttataaatcaaagtccacaaaatcacttggcatctt |
4458221 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
|| | || ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| |||||||| || |
|
|
| T |
4458220 |
taaattccaatctttggaaagaatatactaaatgtcttgagtggcttgaatcaaaagaaccaaagtctgttatttatgtaaattttggaagcatcacagt |
4458121 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaa-aaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||||| |||||||||| |||| |||||||||| ||||||||||||||| |||||| ||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
4458120 |
tatgtctcaagagaagctcttagaatttgcttgggttttggccaacagcaagaaaaccttttttgtggataactaggcctgatcttgtcattggtggctc |
4458021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 4514528 - 4514826
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
||||||||||||||| | |||||| || | |||||||||||||| ||||| ||||| ||||| ||| | |||||||||||||||||| ||||| ||||| |
|
|
| T |
4514528 |
gatgttatgaatgctctttattctatgctcccttctctatacaccattggcccatttgcttcgtttttgaatcaaagtccacaaaatcacttggaatctt |
4514627 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||| |||||||| | |
|
|
| T |
4514628 |
taggttccaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaatcaggatctgttgtttatgttaattttggtagcatcacgat |
4514727 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||||| ||||| | ||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4514728 |
tatgtctccggagaaattgttagagtttgcttggggtttggccaatagcaagaaaacctttttatggatcattaggcctgatcttgtcattggtggctc |
4514826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 31 - 299
Target Start/End: Complemental strand, 4461818 - 4461550
Alignment:
| Q |
31 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
130 |
Q |
| |
|
|||||||||||||| ||||||||| | |||||||| |||||||||||||||||||| || || |||||||| | || |||||||||||||||||||||| |
|
|
| T |
4461818 |
ccttctctatacaccattggtccactttcttcttttataaatcaaagtccacaaaatcacctggcatctttaaattccaatctttggaaagaagatacta |
4461719 |
T |
|
| Q |
131 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||| || | || |||||||||| |
|
|
| T |
4461718 |
aatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtctatgtaaattttggcagcatcacagttatgactcctgatcaactgttagagtttgc |
4461619 |
T |
|
| Q |
231 |
ttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4461618 |
ttggggtttggctgatagcaagaaaccctttttatggatcattaggcctgatcttgtcattggcggctc |
4461550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 4470528 - 4470230
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
||||||||||||| |||||||| | || |||||||||||| | ||||||||| | |||||||| |||||||||||||||||||| | | |||||| |
|
|
| T |
4470528 |
gatgttatgaatgaactctattctatattcccttctctatacgccattggtccactttcttcttttttaaatcaaagtccacaaaatcatctagcatctt |
4470429 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
|| | | |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||| |||| || |
|
|
| T |
4470428 |
taaatttcaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaggatctgttgtctatgtaaatttcggcagcgtcacagt |
4470329 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||||| |||||| || |||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
4470328 |
tatgtctccagagaaactgttagagtttgcttggggtttggcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcattggcggctc |
4470230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 26 - 299
Target Start/End: Complemental strand, 4506557 - 4506284
Alignment:
| Q |
26 |
tgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaaga |
125 |
Q |
| |
|
||||||||||||||||||| ||||| || ||| |||| ||| |||||||||||||||||||| | || || ||||||| || |||||||||||||| || |
|
|
| T |
4506557 |
tgtttccttctctatacactattggccctttaacttcatttgtaaatcaaagtccacaaaatcagtttgcaactttagattcaaatctttggaaagagga |
4506458 |
T |
|
| Q |
126 |
tactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagag |
225 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||| ||||| | ||||| |
|
|
| T |
4506457 |
tactaaatgtctcgaatggctggaatcaaaagaaccggcttctgttgtttatgtgaattttggaagcatcacaattatgtctccggagaaatttttagag |
4506358 |
T |
|
| Q |
226 |
tttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4506357 |
tttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtaattggtggctc |
4506284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 46 - 299
Target Start/End: Complemental strand, 4598851 - 4598598
Alignment:
| Q |
46 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
145 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||| |||||| | ||| ||||||||| | |||||||||||||||||||| || |||||||| |||| |
|
|
| T |
4598851 |
attggccctttatcttcgtttttaaatcaaagtcaacaaaagcatttggcatctttaggtaccaatctttggaaagaagataccaagtgtcttgactggc |
4598752 |
T |
|
| Q |
146 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaa |
245 |
Q |
| |
|
||||||| || |||||||| |||||||||||||| |||||||| ||||| || || ||| || ||| ||| | |||| |||||||||||||||||||| |
|
|
| T |
4598751 |
ttgaatccaatgaaccaaggtctgttgtttatgtgaattttgggagcataacggtgatgactgcagaaaagttgttagactttgcttggggtttggccaa |
4598652 |
T |
|
| Q |
246 |
cagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4598651 |
tagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
4598598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 4299228 - 4299525
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
||||| ||||||||| |||||||| |||| |||||| |||| || ||||| || ||| |||| || ||||||||| |||||| ||| ||||| ||||| |
|
|
| T |
4299228 |
gatgtaatgaatgctctctattctatgttcccttctttatatactattggacctttaccttcattattaaatcaaactccacataatcacttggaatctt |
4299327 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
||| || |||||||||||||||||||| ||||||||||||||||||||||| || || || |||| ||||||||||| |||||||||||| | || || |
|
|
| T |
4299328 |
taggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaatccaaggagccgggatcggttgtttatgtgaattttggcagcgttacagt |
4299427 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggct |
298 |
Q |
| |
|
|||| ||| |||| | || ||||| ||||||||||||||||||| ||| ||||| |||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
4299428 |
tatgactccagagcaactgttagagattgcttggggtttggccaattgcaggaaaccatttttgtggatcattaggccagaccttgtcattggcggct |
4299525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 70 - 299
Target Start/End: Complemental strand, 4516977 - 4516748
Alignment:
| Q |
70 |
aatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctg |
169 |
Q |
| |
|
||||||||||| |||||| ||||| | ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | |||| |
|
|
| T |
4516977 |
aatcaaagtccgcaaaataacttggcttctataggttctaatctttggaaagaagatatgaaatgtcttgaatggcttgaatctaaggaacaaggttctg |
4516878 |
T |
|
| Q |
170 |
ttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggat |
269 |
Q |
| |
|
| |||||||| |||||||| |||||||| || ||| ||| ||| | || ||||||| ||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
4516877 |
tagtttatgtgaattttggaagcatcacggtcatgactccagatcaactgttagagttcgcttggggtttggccaacagcaagaaaccttttttgtggat |
4516778 |
T |
|
| Q |
270 |
cattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
||||||||||| ||||||||||||||||| |
|
|
| T |
4516777 |
tattaggcctgaccttgtcattggtggctc |
4516748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 70 - 299
Target Start/End: Complemental strand, 4626607 - 4626378
Alignment:
| Q |
70 |
aatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctg |
169 |
Q |
| |
|
|||| |||||||||||| | |||| |||||||| || ||||||||||||||||| || || ||||||||||||||||||| || ||||||| |||| |
|
|
| T |
4626607 |
aatcgaagtccacaaaaccagttgatatctttaggttccaatctttggaaagaagacaccaattgtcttgaatggcttgaattcaaggaaccaaagtctg |
4626508 |
T |
|
| Q |
170 |
ttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggat |
269 |
Q |
| |
|
|||||||||| || ||||||||| | | |||||| ||| | |||| || |||||||||||||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
4626507 |
ttgtttatgtgaactttggcagcgttatagttatgactccacagaaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttgtggat |
4626408 |
T |
|
| Q |
270 |
cattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |
|
|
| T |
4626407 |
cattaggcctgatcttgtgattggtggctc |
4626378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 46 - 299
Target Start/End: Original strand, 4613170 - 4613423
Alignment:
| Q |
46 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
145 |
Q |
| |
|
|||||||| ||| |||| || ||| |||||||||||||||| ||||| || |||| | |||||||||||||||||||| || |||||||| |||| |
|
|
| T |
4613170 |
attggtcctttatcttcacttttaagtcaaagtccacaaaatcacttggcaagtttaagtaccaatctttggaaagaagataccaagtgtcttgattggc |
4613269 |
T |
|
| Q |
146 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaa |
245 |
Q |
| |
|
||||||| || ||||| | || ||||||||||| |||||||| ||||| || |||||| || ||| || || |||||||||||||||||||||| || |
|
|
| T |
4613270 |
ttgaatccaaggaaccgaagtccgttgtttatgtgaattttgggagcatgaccgttatgactgcagaaaaactattagagtttgcttggggtttggcgaa |
4613369 |
T |
|
| Q |
246 |
cagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4613370 |
tagcaagcaaccctttttgtggatcattaggcctgatcttgtcattggcggctc |
4613423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 68 - 299
Target Start/End: Original strand, 4256098 - 4256329
Alignment:
| Q |
68 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
167 |
Q |
| |
|
||||||||| |||||| | | ||||| |||| |||| || |||||||||||||||||||| || |||||||||||||||||||| || ||||| || |
|
|
| T |
4256098 |
taaatcaaactccacatagtcacttggcatcgttaggttccaatctttggaaagaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtc |
4256197 |
T |
|
| Q |
168 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtgg |
267 |
Q |
| |
|
||||||||| || |||||||||||||| || |||||| ||| ||| | || |||||||||||||||| |||||||| ||||| ||||| |||||||| |
|
|
| T |
4256198 |
tgttgtttacgtgaattttggcagcattacagttatgactccagatcaactgttagagtttgcttggggattggccaatagcaagaaaccatttttgtgt |
4256297 |
T |
|
| Q |
268 |
atcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||||||||||| || |||||||||||||| |
|
|
| T |
4256298 |
atcattaggcctgacctcgtcattggtggctc |
4256329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 299
Target Start/End: Original strand, 4259577 - 4259859
Alignment:
| Q |
17 |
tctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttg |
116 |
Q |
| |
|
|||||||| |||| |||||| |||| | ||||| || ||| |||| || ||||||||| |||||| ||| || || |||| |||| || |||||||| |
|
|
| T |
4259577 |
tctattctatgttcccttctttatatgctattggacctttaccttcattattaaatcaaactccacataatcacctggcatcgttaggttccaatctttg |
4259676 |
T |
|
| Q |
117 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaag |
216 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| || ||||| ||||||||||| || |||||||||||||| || |||||| ||| ||| | |
|
|
| T |
4259677 |
gaaagaagataccaaatgtcttgaatggcttgaatttaaggaacctgagtctgttgtttacgtgaattttggcagcattacagttatgactccagatcaa |
4259776 |
T |
|
| Q |
217 |
ctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
| |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| || | ||||||||||| |
|
|
| T |
4259777 |
tttttagagtttgcttggggattggccaatagcaagaaaccctttttgtggatcattaggcctgacctcattattggtggctc |
4259859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 296
Target Start/End: Complemental strand, 4586294 - 4586066
Alignment:
| Q |
68 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
167 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||| || |||||||| |||||||||||||| ||||| || || |
|
|
| T |
4586294 |
taaatcaaagtccacaaaaccacttagcatctttaagtacaaatctttggaaagaggataccaagtgtcttgattggcttgaatcaaaggaaccgaggtc |
4586195 |
T |
|
| Q |
168 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtgg |
267 |
Q |
| |
|
||||||||||| |||||||| |||| || |||||| || ||| || || ||||||||||||||||||||||||| ||||| ||| ||||| ||| |
|
|
| T |
4586194 |
cgttgtttatgtgaattttgggagcacaacagttatgactacagaaaaactattagagtttgcttggggtttggccaatagcaagcaacattttttatgg |
4586095 |
T |
|
| Q |
268 |
atcattaggcctgatcttgtcattggtgg |
296 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
4586094 |
atcattagacctgatcttgtcattggtgg |
4586066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 299
Target Start/End: Complemental strand, 4580112 - 4579859
Alignment:
| Q |
46 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
145 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||||| |||| | |||||||||||| | | ||| |||||||||||||||| || |||||| | |||| |
|
|
| T |
4580112 |
attggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggc |
4580013 |
T |
|
| Q |
146 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaa |
245 |
Q |
| |
|
||||||| || ||||| || |||||||||||||| |||||||| ||| | || |||||| || ||| || || |||||||||| |||||||| || || |
|
|
| T |
4580012 |
ttgaatccaaggaacctaggtctgttgtttatgtgaattttgggagcttgacagttatgactgcagaaaaactgttagagtttgcatggggtttagcaaa |
4579913 |
T |
|
| Q |
246 |
cagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||||||| || ||||| |
|
|
| T |
4579912 |
tagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctc |
4579859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 299
Target Start/End: Complemental strand, 4564325 - 4564138
Alignment:
| Q |
112 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgag |
211 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||||||||| |||||||| ||||| || |||||| | | | |
|
|
| T |
4564325 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaattttggaagcattacagttatgacaccaa |
4564226 |
T |
|
| Q |
212 |
agaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
| | || | || ||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4564225 |
aacaactgttggaatttgcttgggggttggccaattgcaataaaccctttttgtggatcattaggcctgaccttgtcattggtggctc |
4564138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 299
Target Start/End: Complemental strand, 4622798 - 4622569
Alignment:
| Q |
68 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
167 |
Q |
| |
|
||||||||| |||||| ||| ||||| ||||| ||| || ||||||||||||||||||| || |||||||| ||||||||||| || ||||| || | |
|
|
| T |
4622798 |
taaatcaaactccacataatcacttggcatctctaggttccaatctttggaaagaagatatcaagtgtcttgagtggcttgaatccaaggaacct-ga-c |
4622701 |
T |
|
| Q |
168 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtgg |
267 |
Q |
| |
|
| ||||||| || |||||||||||||| || || ||| ||||||| | || |||||||||||||||||||||| | ||||| ||||||||||||||| |
|
|
| T |
4622700 |
tcttgtttacgtgaattttggcagcattacagtgatgactcgagatcaactattagagtttgcttggggtttggctgatagcaagaaaccctttttgtgg |
4622601 |
T |
|
| Q |
268 |
atcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||||||||||| |||||||| || ||||| |
|
|
| T |
4622600 |
atcattaggcctgaccttgtcatgggcggctc |
4622569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 109 - 299
Target Start/End: Complemental strand, 4571589 - 4571399
Alignment:
| Q |
109 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
208 |
Q |
| |
|
||||||||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||||||| |||||||| |||| || |||||| || |
|
|
| T |
4571589 |
aatctttggaaagaagataacaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaattttgggagcaggacagttatgactt |
4571490 |
T |
|
| Q |
209 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
||| || || |||||||||| |||||||| || || ||||| ||| ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4571489 |
cagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaactctttttgtggatcattaggcccgatcttgtcattggtggctc |
4571399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 297
Target Start/End: Complemental strand, 4592842 - 4592660
Alignment:
| Q |
115 |
tggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagaga |
214 |
Q |
| |
|
||||||||||||||| | |||||| ||||||||||||| || ||| | | || ||||||||||| ||||| |||||| | || |||||| | ||||| |
|
|
| T |
4592842 |
tggaaagaagatactgagtgtcttaaatggcttgaatcgaaggaatcgggttccgttgtttatgtgaatttcggcagccttacagttatgaatgaagaga |
4592743 |
T |
|
| Q |
215 |
agctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggc |
297 |
Q |
| |
|
| | ||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592742 |
aaatgttagagtttgcttggggtttggccaattgcaataaaccttttttgtggatcattaggcctgatcttgtcattggtggc |
4592660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 109 - 299
Target Start/End: Complemental strand, 4557742 - 4557552
Alignment:
| Q |
109 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
208 |
Q |
| |
|
||||||||||||||||||| || ||||||| ||||||||||| || ||||| || || ||||||||||| |||||||| ||||| || |||||| | |
|
|
| T |
4557742 |
aatctttggaaagaagataacaagtgtcttggttggcttgaatccaaggaaccgaggtccgttgtttatgtgaattttgggagcatgacagttatgacgg |
4557643 |
T |
|
| Q |
209 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
||| || || |||||||||| |||||||| || || ||||| ||||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
4557642 |
cagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggtggctc |
4557552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 115 - 299
Target Start/End: Complemental strand, 4602400 - 4602216
Alignment:
| Q |
115 |
tggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagaga |
214 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||| || || || |||| ||||||||||| |||||||||||||| || |||||| | | | |
|
|
| T |
4602400 |
tggaaagaagatactgagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaattttggcagcattacagttatgacaccccatc |
4602301 |
T |
|
| Q |
215 |
agctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
| | |||| || ||||||||||||||||| || | ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4602300 |
aattattagaattcgcttggggtttggccaattgccataaaccatttttgtggatcattaggcctgatcttgtcattggtggctc |
4602216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 97 - 299
Target Start/End: Complemental strand, 4617651 - 4617449
Alignment:
| Q |
97 |
tctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatca |
196 |
Q |
| |
|
|||||||| || || ||||||||||||||||| | |||||||| ||||||||||| || || || |||| ||||||||||| ||||| |||||||| | |
|
|
| T |
4617651 |
tctttagattccaacctttggaaagaagatacagagtgtcttgattggcttgaatccaaggagccgggatcagttgtttatgtgaatttcggcagcatta |
4617552 |
T |
|
| Q |
197 |
ctgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtgg |
296 |
Q |
| |
|
| |||||| | | ||| | | | || |||||||||||||||||||| |||| ||| | |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4617551 |
cagttatgacacccgagcaattactggaatttgcttggggtttggccaattgcaagaaatcatttttgtggatcataaggcctgatcttgtcattggtgg |
4617452 |
T |
|
| Q |
297 |
ctc |
299 |
Q |
| |
|
||| |
|
|
| T |
4617451 |
ctc |
4617449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 299
Target Start/End: Complemental strand, 4568561 - 4568483
Alignment:
| Q |
221 |
tagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
||||||| |||| ||||| ||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
4568561 |
tagagttctcttgaggttttgccaacagcaagaaaccttttttgtggatcattaggccttagcttgtcattggtggctc |
4568483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 4835531 - 4835571
Alignment:
| Q |
110 |
atctttggaaagaagatactaaatgtcttgaatggcttgaa |
150 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
4835531 |
atctttggaaggaagatacaaaatgtcttgaatggcttgaa |
4835571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 4568700 - 4568628
Alignment:
| Q |
70 |
aatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaat |
142 |
Q |
| |
|
||||||| ||| ||||| ||||| | ||||||| || ||||||||||||||||||| ||||||||||||| |
|
|
| T |
4568700 |
aatcaaaatccccaaaagcacttggcttctttaggttccaatctttggaaagaagatatgaaatgtcttgaat |
4568628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 24103724 - 24103426
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
||||||||||||||| |||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
24103724 |
gatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaaatcacttggcatctt |
24103625 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
|| | || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |
|
|
| T |
24103624 |
taaattccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatcagttgtttatgtaaattttggtagcatcacagt |
24103525 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
24103524 |
tatgtcacgagagaagctcttagagtttgcttggggtttggccaatagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctc |
24103426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 299
Target Start/End: Original strand, 27999753 - 27999804
Alignment:
| Q |
248 |
gcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||| ||||| ||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
27999753 |
gcaagaaaccttttttgtggatcactaggcctaatcttgtcattggtggctc |
27999804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 20863250 - 20863548
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
||||||||||||| | |||||||| |||| |||||||||||||| ||||| || || | ||||||| |||||||||||||||| ||| ||||| | |||| |
|
|
| T |
20863250 |
gatgttatgaatgttctctattctatgttcccttctctatacaccattggcccttttgtttcttttttaaatcaaagtccacagaatcacttggcgtctt |
20863349 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
|||| || | ||||||||||||||| ||| ||||||||| |||||||||||| |||||||| ||||| |||| ||||||||||||||||| | ||| || |
|
|
| T |
20863350 |
tagattcaagtctttggaaagaagacactgaatgtcttgcatggcttgaatcgaaagaaccgggatctattgtatatgtaaattttggcagtaccacagt |
20863449 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||||| ||| || | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20863450 |
catgtctgtagaaaaattgttagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
20863548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 112 - 299
Target Start/End: Complemental strand, 1674840 - 1674653
Alignment:
| Q |
112 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgag |
211 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||| || ||||| |||| ||||||||||| ||||| || ||||| | ||||||| ||| || |
|
|
| T |
1674840 |
ctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaatttcggtagcattattgttatgactccag |
1674741 |
T |
|
| Q |
212 |
agaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
| | || | ||||||||||||||||||||| | |||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
1674740 |
atcaactattggagtttgcttggggtttggccgattgcaagaaaccttttttgtggatcactaggcctgatcttgtcattggtggctc |
1674653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 291
Target Start/End: Original strand, 16685782 - 16685964
Alignment:
| Q |
109 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
208 |
Q |
| |
|
|||||||||||| ||||||| || |||||||| ||||||||||| || ||||| || || ||||||||||| |||||||| ||||| || |||||| || |
|
|
| T |
16685782 |
aatctttggaaataagataccaagtgtcttgattggcttgaatccaaggaaccgagttccgttgtttatgtgaattttgggagcatgacagttatgactg |
16685881 |
T |
|
| Q |
209 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcatt |
291 |
Q |
| |
|
||| || || |||||||||||||||||||| |||| ||||| ||| ||| |||||||||||| |||||||||||||| |
|
|
| T |
16685882 |
cagaaaaactattagagtttgcttggggtttgaccaatagcaagcaacattttcaatggatcattaggtctgatcttgtcatt |
16685964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 3087145 - 3086847
Alignment:
| Q |
1 |
gatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctt |
100 |
Q |
| |
|
||||| |||||||| | |||||| |||| ||||| |||| || ||||| |||||| |||| | |||||||||| | |||| ||| ||||| |||||| |
|
|
| T |
3087145 |
gatgtaatgaatgcgctatattctgtgttcccttcattatataccattggaccattaccttcactactaaatcaaacttcacataatcacttggcatctt |
3087046 |
T |
|
| Q |
101 |
tagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgt |
200 |
Q |
| |
|
||| || |||||||||||||||||||| || ||||||||||||||||||||||| | || |||||||||||||| | |||||||||||| || || |
|
|
| T |
3087045 |
taggttccaatctttggaaagaagataccaagtgtcttgaatggcttgaatcaaagggacttgagtctgttgtttatgtgagttttggcagcattacagt |
3086946 |
T |
|
| Q |
201 |
tatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
|||| ||| |||| | || ||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3086945 |
tatgactcaagagcaactattagagtttgcttggggtttggccaatagcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctc |
3086847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 109 - 299
Target Start/End: Original strand, 3234 - 3424
Alignment:
| Q |
109 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
208 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||| ||||| || ||||| |||||||||||||| ||||| |||||||| || |||||| ||| |
|
|
| T |
3234 |
aatctttggaaagaagataccaagtgtcttgaatggctcgaatccaaggaacctgagtctgttgtttatgtgaatttcggcagcattacagttatgactc |
3333 |
T |
|
| Q |
209 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
| | | || |||| |||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3334 |
caaatcaactgttagaatttgcttggggtttggccgatagcaagaaaccgtttttgtggatcattaggcctgatcttgtcattggcggctc |
3424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 299
Target Start/End: Original strand, 4103 - 4391
Alignment:
| Q |
8 |
tgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactc |
107 |
Q |
| |
|
|||||||| |||||||| |||| |||||| |||| || ||||| || ||| |||| || ||||||||| |||||| ||| ||| |||||||| || |
|
|
| T |
4103 |
tgaatgctctctattctatgttcccttctttatataccattggacctttaacttcattattaaatcaaactccacataatcacta---atctttaggttc |
4199 |
T |
|
| Q |
108 |
taatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtct |
207 |
Q |
| |
|
|||||||||||||||||||| || |||||||| ||||||| ||| || ||||| || ||||||||||| |||||||| ||||| || |||||| || |
|
|
| T |
4200 |
caatctttggaaagaagataccaagtgtcttgagtggcttgcatccaaggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgact |
4299 |
T |
|
| Q |
208 |
cgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctc |
299 |
Q |
| |
|
| ||| | || ||||||||||||||| |||| |||| | || ||| ||||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
4300 |
ccagatcaactgttagagtttgcttgggttttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctc |
4391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 97 - 299
Target Start/End: Complemental strand, 1281743 - 1281541
Alignment:
| Q |
97 |
tctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatca |
196 |
Q |
| |
|
|||||||| || || |||||||||||||||| | |||||| ||||||||||||| || ||||| ||||||||||||||||| ||||| || ||||| | |
|
|
| T |
1281743 |
tctttagattccaacctttggaaagaagatatcgagtgtcttcaatggcttgaatcgaaggaaccgagatctgttgtttatgtgaatttcggaagcatta |
1281644 |
T |
|
| Q |
197 |
ctgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtgg |
296 |
Q |
| |
|
| |||||| ||| |||| | || || |||||||||||| |||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
1281643 |
cagttatgactccagagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcgg |
1281544 |
T |
|
| Q |
297 |
ctc |
299 |
Q |
| |
|
||| |
|
|
| T |
1281543 |
ctc |
1281541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 77 - 4
Alignment:
| Q |
112 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattt |
185 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||| || ||||| |||| ||||||||||| ||||| |
|
|
| T |
77 |
ctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaattt |
4 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 3162 - 3208
Alignment:
| Q |
247 |
agcaaaaaaccctttttgtggatcattaggcctgatcttgtcattgg |
293 |
Q |
| |
|
||||| ||||||||| |||||||||||||| |||| ||||||||||| |
|
|
| T |
3162 |
agcaagaaaccctttgtgtggatcattaggtctgaccttgtcattgg |
3208 |
T |
|
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