View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9310_low_11 (Length: 519)
Name: NF9310_low_11
Description: NF9310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9310_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 468; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 6 - 505
Target Start/End: Original strand, 35095396 - 35095895
Alignment:
| Q |
6 |
aggagcagagaactgattattgtcgagataaattttcttcagccactgcatcgcttgaaacgcctctgctggaatcgcgccagagaatttattattagat |
105 |
Q |
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|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
35095396 |
aggaccagtgaactgattattgtcgagataaattttcttcagccactgcatcgcttgaaacgcctctgctggaatctcgccagagaatttattattagaa |
35095495 |
T |
|
| Q |
106 |
aggtaaatgttcttaagaccggtgagtttgtttagccctggccatgtggtctcgaattggttgttcattaagctaatgggtctgatctacggtaaatcct |
205 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||| |
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| T |
35095496 |
aggtaaatgttcttaagaccggtgagtttgtttaggcctggccatgtggtatcgaattggttgttcattaagctaatggttctgatatacggtaaatcct |
35095595 |
T |
|
| Q |
206 |
tgatggaatcgatgtcaatgttgcctttaaggttcatgttttcgagtttaaatccccaaacatgtcctttgtaacaaagaacgcccgcccaatttgcatt |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35095596 |
tgatggaatcgatgtcaatgttgcctttaaggttcatgttttcgagtttaaatccccaaacatgtcctttgtaacaaagaacgcccgcccaatttgcatt |
35095695 |
T |
|
| Q |
306 |
atcagcattacatggaggcatggatgtattccatgaagataatgcaacgtcggtgttttgaagagagtttttaaatttaaggagagaatctatgtcagaa |
405 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35095696 |
atcagcattacatggaggcatggatgtattccatgaagataatgcaacgtcggtgttttgaagagagtttttaaatttaaggagagaatctatgtcagaa |
35095795 |
T |
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| Q |
406 |
atacaataagcaatgttgatgagattaatagaaaagaagaaagtgatgaagaatgatggtgccataataataaaatatagtgaaggacacatgcatgcac |
505 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35095796 |
atacaataagcaatgttgatgagattaatagaaaagaagaaagtgatgaagaatgatggtgccataataataaaatatagtgaaggacacatgcatgcac |
35095895 |
T |
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