View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9310_low_77 (Length: 240)
Name: NF9310_low_77
Description: NF9310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9310_low_77 |
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Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 47900518 - 47900319
Alignment:
| Q |
18 |
ctatcaatgaagataatgaagttggcatggaactcatggaaattggagcagaaagaacaaaaaatgtgttgattctcatgagtgatactggtggtggaca |
117 |
Q |
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| T |
47900518 |
ctatcaatgaagataatgaaggtggcatggaactcatggaaattggagcagaaagaacaaaaaatgtgttgattctcatgagtgatactggtggtggaca |
47900419 |
T |
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| Q |
118 |
tagagcttctgctgaggctattcgtgatgcttttcaaattgaattcggtgatgaatacaaggtactttaatcacacttccttgtgttttggatctgttgc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
47900418 |
tagagcttctgctgaggctattcgtgatgcttttcaaattgaattcggtgatgaatacaaggtactttaatcacacttccttctgttttggatctgttgc |
47900319 |
T |
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