View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9313_low_19 (Length: 233)

Name: NF9313_low_19
Description: NF9313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9313_low_19
NF9313_low_19
[»] chr6 (20 HSPs)
chr6 (130-219)||(12652755-12652844)
chr6 (130-219)||(25064050-25064139)
chr6 (133-219)||(8496783-8496869)
chr6 (129-219)||(33109648-33109738)
chr6 (130-219)||(23947490-23947579)
chr6 (143-219)||(4984750-4984826)
chr6 (155-219)||(4088299-4088363)
chr6 (155-219)||(10228520-10228583)
chr6 (133-219)||(17237457-17237543)
chr6 (162-219)||(33740751-33740808)
chr6 (130-196)||(8520865-8520931)
chr6 (150-219)||(12165676-12165745)
chr6 (146-219)||(17334607-17334679)
chr6 (130-219)||(8196580-8196669)
chr6 (130-219)||(16418974-16419062)
chr6 (147-219)||(8028291-8028363)
chr6 (130-219)||(7876218-7876300)
chr6 (130-219)||(7881276-7881358)
chr6 (161-219)||(33543793-33543851)
chr6 (130-211)||(34489063-34489144)
[»] chr4 (35 HSPs)
chr4 (130-219)||(10389926-10390015)
chr4 (130-219)||(1531733-1531822)
chr4 (130-219)||(44947230-44947319)
chr4 (129-219)||(50179597-50179687)
chr4 (130-219)||(4643683-4643772)
chr4 (130-219)||(9529051-9529140)
chr4 (130-219)||(9283738-9283827)
chr4 (130-219)||(25273702-25273791)
chr4 (137-219)||(867991-868073)
chr4 (130-215)||(9645726-9645811)
chr4 (130-219)||(43444220-43444309)
chr4 (131-219)||(53616824-53616912)
chr4 (146-219)||(31381844-31381917)
chr4 (143-219)||(2115761-2115837)
chr4 (130-219)||(50766682-50766773)
chr4 (130-219)||(6972637-6972725)
chr4 (130-219)||(34024609-34024698)
chr4 (143-219)||(38706883-38706957)
chr4 (130-219)||(43154193-43154282)
chr4 (130-219)||(47416712-47416800)
chr4 (155-219)||(35965148-35965212)
chr4 (146-219)||(10359719-10359793)
chr4 (142-219)||(21089991-21090069)
chr4 (130-196)||(29965502-29965568)
chr4 (137-219)||(37188765-37188847)
chr4 (130-219)||(20569079-20569168)
chr4 (130-218)||(2624324-2624412)
chr4 (161-219)||(3338836-3338894)
chr4 (130-219)||(5333703-5333790)
chr4 (146-219)||(56194439-56194515)
chr4 (155-219)||(51317837-51317902)
chr4 (143-219)||(1931876-1931952)
chr4 (155-218)||(35261040-35261102)
chr4 (128-219)||(27594010-27594100)
chr4 (155-219)||(12265306-12265371)
[»] chr7 (30 HSPs)
chr7 (130-219)||(26583529-26583618)
chr7 (130-219)||(46821829-46821918)
chr7 (130-217)||(2843402-2843489)
chr7 (149-219)||(32684519-32684589)
chr7 (130-219)||(12539128-12539217)
chr7 (137-218)||(26492187-26492268)
chr7 (146-219)||(42311111-42311184)
chr7 (130-219)||(20116398-20116487)
chr7 (130-219)||(22928043-22928132)
chr7 (146-219)||(35496348-35496421)
chr7 (130-218)||(1449003-1449091)
chr7 (130-219)||(1485429-1485516)
chr7 (160-218)||(46338898-46338956)
chr7 (137-219)||(21266214-21266296)
chr7 (131-219)||(48207720-48207806)
chr7 (157-215)||(6558758-6558817)
chr7 (133-203)||(14628069-14628139)
chr7 (146-219)||(23085353-23085424)
chr7 (130-211)||(35667412-35667492)
chr7 (132-204)||(17499834-17499906)
chr7 (132-204)||(17553308-17553380)
chr7 (146-219)||(433865-433936)
chr7 (130-219)||(32522104-32522192)
chr7 (143-219)||(42067233-42067308)
chr7 (184-219)||(23425544-23425579)
chr7 (155-220)||(31235964-31236030)
chr7 (160-219)||(42408206-42408266)
chr7 (157-219)||(6001862-6001925)
chr7 (146-219)||(45199204-45199277)
chr7 (143-203)||(45630030-45630089)
[»] chr2 (32 HSPs)
chr2 (143-219)||(9986520-9986596)
chr2 (130-219)||(36233824-36233913)
chr2 (132-219)||(2808643-2808730)
chr2 (146-219)||(8971801-8971874)
chr2 (130-219)||(20047254-20047343)
chr2 (143-219)||(27249324-27249400)
chr2 (143-219)||(41712938-41713014)
chr2 (130-219)||(3270401-3270490)
chr2 (130-219)||(6173451-6173540)
chr2 (130-219)||(21570581-21570670)
chr2 (130-219)||(34598806-34598895)
chr2 (130-206)||(31581888-31581964)
chr2 (157-219)||(459447-459509)
chr2 (137-219)||(40660102-40660183)
chr2 (130-219)||(30420496-30420585)
chr2 (130-219)||(33229161-33229250)
chr2 (135-219)||(40626200-40626284)
chr2 (140-219)||(3725010-3725089)
chr2 (143-219)||(25086868-25086942)
chr2 (146-219)||(45128040-45128112)
chr2 (161-219)||(7015883-7015941)
chr2 (147-219)||(32680755-32680826)
chr2 (161-219)||(9374722-9374780)
chr2 (144-219)||(32913075-32913150)
chr2 (157-202)||(10248011-10248056)
chr2 (130-219)||(17319145-17319233)
chr2 (130-219)||(39642032-39642121)
chr2 (160-219)||(27949272-27949332)
chr2 (143-219)||(37614298-37614374)
chr2 (190-219)||(4228011-4228040)
chr2 (143-215)||(4192671-4192743)
chr2 (133-189)||(19193415-19193471)
[»] scaffold0608 (1 HSPs)
scaffold0608 (129-219)||(56-146)
[»] chr8 (29 HSPs)
chr8 (129-219)||(9498775-9498864)
chr8 (137-219)||(11725511-11725593)
chr8 (130-219)||(9619531-9619620)
chr8 (133-219)||(43890298-43890384)
chr8 (130-219)||(44100105-44100194)
chr8 (140-219)||(17949079-17949158)
chr8 (136-219)||(42448201-42448284)
chr8 (138-219)||(11196722-11196803)
chr8 (143-219)||(14907097-14907173)
chr8 (156-219)||(34611652-34611715)
chr8 (137-219)||(44577867-44577947)
chr8 (160-218)||(4808816-4808874)
chr8 (128-219)||(33342259-33342348)
chr8 (130-219)||(32724661-32724752)
chr8 (156-219)||(2655717-2655780)
chr8 (160-219)||(11464024-11464083)
chr8 (130-219)||(29777051-29777140)
chr8 (155-219)||(28239679-28239744)
chr8 (137-210)||(33895911-33895983)
chr8 (130-218)||(19876039-19876122)
chr8 (146-219)||(9072555-9072628)
chr8 (146-219)||(27747285-27747358)
chr8 (143-219)||(15597340-15597416)
chr8 (133-211)||(35580282-35580361)
chr8 (163-219)||(12173358-12173413)
chr8 (163-219)||(12417786-12417841)
chr8 (154-219)||(12184134-12184199)
chr8 (154-219)||(12428562-12428627)
chr8 (135-219)||(15046719-15046804)
[»] scaffold0003 (1 HSPs)
scaffold0003 (130-219)||(361967-362056)
[»] chr5 (26 HSPs)
chr5 (130-219)||(30371542-30371631)
chr5 (130-219)||(34881528-34881617)
chr5 (130-219)||(7887110-7887199)
chr5 (130-219)||(27267033-27267122)
chr5 (130-219)||(42579695-42579784)
chr5 (130-219)||(19259983-19260070)
chr5 (130-217)||(7241600-7241687)
chr5 (130-217)||(7246776-7246863)
chr5 (146-219)||(18677639-18677712)
chr5 (130-219)||(19281117-19281206)
chr5 (130-219)||(36344662-36344751)
chr5 (130-219)||(41184617-41184706)
chr5 (143-219)||(21060454-21060530)
chr5 (143-219)||(26578080-26578156)
chr5 (155-219)||(28235428-28235492)
chr5 (160-219)||(16981138-16981197)
chr5 (143-219)||(7150508-7150584)
chr5 (176-219)||(10649317-10649360)
chr5 (180-219)||(27751782-27751821)
chr5 (128-219)||(43261990-43262081)
chr5 (135-219)||(3271580-3271663)
chr5 (143-219)||(35676248-35676324)
chr5 (157-219)||(11767651-11767714)
chr5 (146-211)||(4953914-4953981)
chr5 (185-219)||(11192240-11192274)
chr5 (187-219)||(781264-781296)
[»] chr3 (30 HSPs)
chr3 (130-219)||(4178377-4178466)
chr3 (128-219)||(36905932-36906023)
chr3 (130-219)||(12115906-12115995)
chr3 (130-219)||(51202422-51202511)
chr3 (130-218)||(32607280-32607369)
chr3 (143-219)||(39917569-39917645)
chr3 (143-219)||(44907572-44907648)
chr3 (130-208)||(4172379-4172457)
chr3 (130-219)||(46934455-46934544)
chr3 (143-219)||(25162262-25162338)
chr3 (143-219)||(25631700-25631776)
chr3 (155-219)||(47980841-47980905)
chr3 (155-219)||(47990128-47990192)
chr3 (155-219)||(47999415-47999479)
chr3 (155-219)||(48008702-48008766)
chr3 (130-212)||(38855217-38855298)
chr3 (157-216)||(2342332-2342391)
chr3 (131-219)||(29503275-29503364)
chr3 (160-219)||(14464350-14464409)
chr3 (145-219)||(49552396-49552470)
chr3 (168-219)||(38440750-38440801)
chr3 (137-219)||(25849641-25849722)
chr3 (153-219)||(36735325-36735391)
chr3 (130-214)||(30648917-30649000)
chr3 (143-219)||(50611590-50611666)
chr3 (161-219)||(35499375-35499433)
chr3 (172-219)||(37169085-37169132)
chr3 (143-189)||(53327843-53327889)
chr3 (186-219)||(3850628-3850661)
chr3 (157-202)||(31793920-31793965)
[»] chr1 (33 HSPs)
chr1 (130-219)||(40646507-40646596)
chr1 (130-219)||(19716069-19716158)
chr1 (130-219)||(33291592-33291681)
chr1 (130-219)||(35584794-35584883)
chr1 (137-219)||(7342548-7342630)
chr1 (149-219)||(40881186-40881256)
chr1 (130-219)||(51871684-51871772)
chr1 (143-219)||(50148204-50148280)
chr1 (130-218)||(50166273-50166360)
chr1 (160-219)||(50272313-50272372)
chr1 (137-219)||(5701083-5701165)
chr1 (149-219)||(30818518-30818588)
chr1 (130-219)||(5324730-5324819)
chr1 (146-219)||(51868818-51868891)
chr1 (155-211)||(18569491-18569547)
chr1 (160-215)||(30878924-30878979)
chr1 (130-219)||(9172307-9172396)
chr1 (130-219)||(9180289-9180378)
chr1 (131-219)||(14545340-14545428)
chr1 (155-219)||(19723178-19723241)
chr1 (164-219)||(25728132-25728187)
chr1 (145-219)||(45426235-45426310)
chr1 (149-219)||(11453773-11453843)
chr1 (137-219)||(25406457-25406539)
chr1 (130-219)||(45805982-45806072)
chr1 (130-183)||(31836685-31836738)
chr1 (155-219)||(38520706-38520771)
chr1 (171-218)||(7312272-7312319)
chr1 (161-219)||(20266151-20266210)
chr1 (130-203)||(48217449-48217520)
chr1 (180-219)||(28035008-28035047)
chr1 (133-219)||(41081877-41081964)
chr1 (143-217)||(39987217-39987290)
[»] scaffold0495 (1 HSPs)
scaffold0495 (155-219)||(5239-5302)
[»] scaffold0311 (1 HSPs)
scaffold0311 (128-219)||(8535-8624)
[»] scaffold0426 (1 HSPs)
scaffold0426 (137-219)||(6161-6242)
[»] scaffold0264 (1 HSPs)
scaffold0264 (160-219)||(20566-20624)
[»] scaffold0231 (1 HSPs)
scaffold0231 (130-188)||(25678-25736)


Alignment Details
Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 12652755 - 12652844
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12652755 aacaagtcggccctagttttctctctctaggttttctctcacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 12652844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 25064050 - 25064139
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25064050 aacaagccggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 25064139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 8496783 - 8496869
Alignment:
Q  133 aagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| | ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  8496783 aagtcggtcctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgagtcaattcttgacctgaaatc 8496869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 33109648 - 33109738
Alignment:
Q  129 taacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  33109648 taacaagccggccctagttttctctttttaggttttctcttccagtttcttcattgacgggtggttttgggtcaatttttgacctaaaatc 33109738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 23947579 - 23947490
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| || || ||||||||||| |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23947579 aacaagccgaccctagttttctctctctaggttttttcttctagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 23947490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 4984826 - 4984750
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4984826 tagttttatctctttaggttttctcttacagtttctccattgaggggtggttttgggtcaattcttgacctgaaatc 4984750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 4088299 - 4088363
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  4088299 tctaggttttcttttacaggttctttattgaggggtggttttgggtcaattcttgacctgaaatc 4088363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 10228520 - 10228583
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  10228520 tctaggttttctcttcccgtttcttcattg-ggggtggttttgggtcaattcttgacctgaaatc 10228583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 17237543 - 17237457
Alignment:
Q  133 aagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||| ||||||||||| |||| ||||||| ||  || || | |||||||||||||||||||||||||||||||| |||||||    
T  17237543 aagtcggccctagttttctctctctatgttttcttttctagattttccattgaggggtggttttgggtcaattcttgacatgaaatc 17237457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 33740808 - 33740751
Alignment:
Q  162 tttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||    
T  33740808 tttctcttactgtttcttcattgaggggtggtttttggtcaattcttgacctaaaatc 33740751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 8520931 - 8520865
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggtttt 196  Q
    |||||||||||| |||||||||||||||||||||||||||  |||||||||||| | ||||| ||||    
T  8520931 aacaagtcggccctagttttctctttctaggttttctcttcgagtttcttcattaatgggtgatttt 8520865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 12165676 - 12165745
Alignment:
Q  150 ctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||| ||| ||||||||||| ||||||||||||||||| ||  ||||||||||||| |||||||||||||    
T  12165676 ctctctctcggttttctcttccagtttcttcattgaggagttattttgggtcaattattgacctgaaatc 12165745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 17334607 - 17334679
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||||| |||||||||||| |||||||||||| |||||||||||| || |||||||| ||||||||    
T  17334607 ttttctctctctagattttctcttacaatttcttcattga-gggtggttttggatcgattcttgatctgaaatc 17334679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 8196669 - 8196580
Alignment:
Q  130 aacaagtcggccatagttt-tctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| |||||| ||||| ||||| ||||||  ||||||||||||||||| |||||||||||| ||| |||||||||| |||||    
T  8196669 aacaagccggccttagtttctctctctctagattttctggtacagtttcttcattga-gggtggttttggatcagttcttgacctaaaatc 8196580  T

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Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 16418974 - 16419062
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| || |||||||| ||||||||||||| | | |||||||||||  |||||||||||| |||||||||| |||| |||||    
T  16418974 aacaagccggccttaattttctctctctaggttttctcatcccgtttcttcatt-tggggtggttttgagtcaattcttaacctaaaatc 16419062  T

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Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 8028363 - 8028291
Alignment:
Q  147 tttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| | ||||||||||  |||||||||||||||||| |||| ||||||||||||| |||| ||| ||||    
T  8028363 tttctctctttaggttttctagtacagtttcttcattgagaggtgattttgggtcaattattgatctggaatc 8028291  T

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Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 7876300 - 7876218
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||  ||||||||||| |||||||||||       |||||||||||||||||||||||||| |||||| ||||||| |||||    
T  7876300 aacaagtcagctctagttttctctctctaggttttc-------gtttcttcattgaggggtggttttggatcaattattgacctaaaatc 7876218  T

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Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 7881358 - 7881276
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||  ||||||||||| |||||||||||       |||||||||||||||||||||||||| |||||| ||||| |||||||    
T  7881358 aacaagtcagctctagttttctctctctaggttttc-------gtttcttcattgaggggtggttttggatcaattattgacttgaaatc 7881276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 33543851 - 33543793
Alignment:
Q  161 ttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||  ||||||||| |||||||||||||||| |||| || |||||||||||||    
T  33543851 ttttctcttctagtttcttcgttgaggggtggttttgagtcagtttttgacctgaaatc 33543793  T

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Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 34489063 - 34489144
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgac 211  Q
    ||||||||| || ||||||| ||| ||||||||||||||| || ||||||   |||||||||||||| | |||||| |||||    
T  34489063 aacaagtcgaccctagttttttctctctaggttttctctttcattttcttggatgaggggtggtttttgatcaatttttgac 34489144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 10390015 - 10389926
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10390015 aacaagccggccctagttttctctttctaggttttctcttatagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 10389926  T

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Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 1531733 - 1531822
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1531733 aacaagccggtcctagttttctctttctaggttttctcttacagtttcttcattgaggggtggtattgggtcaattcttgacctgaaatc 1531822  T

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Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 44947230 - 44947319
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| | ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44947230 aacaagtcggtcctagttttctctctctaagttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 44947319  T

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Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 50179597 - 50179687
Alignment:
Q  129 taacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  50179597 taacaagtcgaccatagttttctctctctagcttttctcttacagtttctccattgaggggtggttttgggtcaattcttaacctgaaatc 50179687  T

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Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 4643683 - 4643772
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| |||||||||||||    
T  4643683 aacaagtcggccctagttttctctttctaggttttctcttacagtctcttcattgaggggtggttttaggtgaatttttgacctgaaatc 4643772  T

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Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 9529140 - 9529051
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9529140 aacaagtcggccctagttttatctctttaggttttctcttacagtttcttcactgaggggtggttttgggtcaattcttgacctgaaatc 9529051  T

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Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 9283738 - 9283827
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  9283738 aacaagtcggccctagttttctctctctaggttatctcttacaatttcttcattgaggggtggttttgggtcaatacttaacctgaaatc 9283827  T

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Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 25273702 - 25273791
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  25273702 aacaagccggccctagttttctctctctagattttctcttacagtttctccattgaggggtggttttggatcaattcttgacctgaaatc 25273791  T

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Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 867991 - 868073
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  867991 cggccctagttttctctctctaggttttctcttccagtttcttcattgaggggtggttttaggtcgattcttgacatgaaatc 868073  T

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Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 9645811 - 9645726
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctga 215  Q
    |||||| ||||| ||||||||| | |||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9645811 aacaagccggccctagttttctttctctaggctttatcttacagtttcttcattgaggggtcgttttgggtcaattcttgacctga 9645726  T

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Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 43444220 - 43444309
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| || |||||||||||||| |||||||||||||| |||| ||||||||    
T  43444220 aacaagccggccctagttttctctctctaggttttctcttacaattccttcattgaggggtagttttgggtcaatttttgatctgaaatc 43444309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 53616912 - 53616824
Alignment:
Q  131 acaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||| || |||||||| |||||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  53616912 acaagccggccctaattttctctctctaggttttctcttacaatttcttcgttgaggggtgactttgggtcaattcttgacctgaaatc 53616824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 31381917 - 31381844
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||||| ||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||    
T  31381917 ttttctctctctagattttctcttacggtttcttcgttgatgggtggttttgggtcaattcttgacctgaaatc 31381844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 2115837 - 2115761
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| ||||| |||| ||||||| ||| |||||||||||||||||||||||||||| |||||||||||||    
T  2115837 tagttttctctctctagattttttcttacaatttattcattgaggggtggttttgggtcaattattgacctgaaatc 2115761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 50766773 - 50766682
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttct--tcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| ||||||| ||| |||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||| ||||||||    
T  50766773 aacaagccggccctagttttttctctctaggttttctcttacaatttctcttcattgagaggtggttttgggtcaattcttgatctgaaatc 50766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 6972637 - 6972725
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| || |||||||| |||||||||| |||| | |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  6972637 aacaagccggccctaattttctctctctaggttttttcttccggtttcttcattg-ggggtggttttgggtcaattcttgatctgaaatc 6972725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 34024698 - 34024609
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| | ||| ||| ||| ||||| |||| ||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34024698 aacaagtcggtcttaggtttttctctctagattttttcttttagtttcttcattgaggggtggttttggatcaattcttgacctgaaatc 34024609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 38706957 - 38706883
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||    
T  38706957 tagttttctct--ctaggttttttcttactgtttcttcattgaggggtggttttgggtcaattcttgatctaaaatc 38706883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 43154282 - 43154193
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| |||| ||||||||||| | |||||||| ||||||| ||| | ||||||| |||||||||||||||||||||||| |||||||    
T  43154282 aacaagttggccctagttttctctctttaggttttatcttacaatttatccattgagaggtggttttgggtcaattcttgacttgaaatc 43154193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 47416712 - 47416800
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||| || ||||||| || | ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| |||||||    
T  47416712 aacaagtcgaccctagttttttcat-ctaggttttctcttacaatttcttcattgaggggtgattttgggtcaattattgacttgaaatc 47416800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 35965212 - 35965148
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  35965212 tctaggttttctcttccagattcttcattgaggggtggttttgggtcaattttttacctgaaatc 35965148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 10359793 - 10359719
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgagggg-tggttttgggtcaattcttgacctgaaatc 219  Q
    |||| ||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  10359793 ttttttctctctagattttctctttcagtttcttcattgagggggtggttttgggtcaatttttgacctgaaatc 10359719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 21089991 - 21090069
Alignment:
Q  142 atagttttctctttctaggttttctcttacagtttcttcattga-ggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||||  |||| ||||||||    
T  21089991 atagttttctctctctaggttttctcttctagtttcttcattgagggggtggttttgggtcaatctttgatctgaaatc 21090069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 29965502 - 29965568
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggtttt 196  Q
    |||||||||||| || |||||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  29965502 aacaagtcggccctaattttctctctctaggttttctcttacaattttttcattgaggggtggtttt 29965568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 37188847 - 37188765
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||||||| |||||||||||||||  || || ||||| |||| ||||||||||||||||| |||||||||||||    
T  37188847 cggccctagttttctctctctaggttttctcttctagatttttcatcgaggagtggttttgggtcaattattgacctgaaatc 37188765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 20569079 - 20569168
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||  ||||||||||  |||||||||| || || | |||||||||||| |||||||||||||||||||||| ||||||||||    
T  20569079 aacaagccggctctagttttctccctctaggttttttcgtataatttcttcattgatgggtggttttgggtcaattcttaacctgaaatc 20569168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 2624324 - 2624412
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaat 218  Q
    |||||| ||||| ||||||| ||| |||||||||||||||  |||||||| ||||||||||| ||||||||  ||| ||||||||||||    
T  2624324 aacaagccggccctagttttttctctctaggttttctcttctagtttctttattgaggggtgattttgggttgatttttgacctgaaat 2624412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 3338894 - 3338836
Alignment:
Q  161 ttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  3338894 ttttctcttccagtttcttcattgagaggtggttttgggtcaatttttgacctaaaatc 3338836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 5333790 - 5333703
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| || |||| ||| ||||||||||||||| | |||||||||||  |||||||||||||||||||| ||||| |||||||    
T  5333790 aacaagccggccctaattttttctctctaggttttctcttcccgtttcttcatt--ggggtggttttgggtcaatttttgacatgaaatc 5333703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 56194439 - 56194515
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtg---gttttgggtcaattcttgacctgaaatc 219  Q
    |||| ||| ||||||||||||| | | |||||||||||||||||||   ||||||||||||||||||||||||||||    
T  56194439 ttttttctctctaggttttctcatcccgtttcttcattgaggggtggtggttttgggtcaattcttgacctgaaatc 56194515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 51317837 - 51317902
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattc-ttgacctgaaatc 219  Q
    ||||| || ||||||  |||||||||||||||||||| |||||||||||||| |||||||||||||    
T  51317837 tctagattgtctcttctagtttcttcattgaggggtgattttgggtcaattctttgacctgaaatc 51317902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 1931952 - 1931876
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| ||| | |||||||||||||  ||||||||||||||| |||||||| ||||||||  || ||||||||||    
T  1931952 tagttttttctctttaggttttctcttctagtttcttcattgagaggtggtttcgggtcaatatttaacctgaaatc 1931876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 35261040 - 35261102
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaat 218  Q
    |||||||||||||||   |||||||||||||||| || ||||||||||||| ||||||||||||    
T  35261040 tctaggttttctcttctcgtttcttcattgaggg-tgattttgggtcaatttttgacctgaaat 35261102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 27594100 - 27594010
Alignment:
Q  128 ctaacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||  ||||| |||||||  || ||||||||||||||| || || ||||||||| ||||| |||| |||||||| ||||| |||||||    
T  27594100 ctaacaaaccggccctagtttttcctctctaggttttctcttccactt-cttcattgatgggtgattttaggtcaatttttgacatgaaatc 27594010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 12265306 - 12265371
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgagggg-tggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||||||  | |||||||||| ||||| || |||| |||||||| |||||||||||||    
T  12265306 tctaggttttctcttcaattttcttcattaagggggtgatttttggtcaatttttgacctgaaatc 12265371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 26583529 - 26583618
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26583529 aacaagccggccctagttttctctttctaggttttttcttacagtttcttcattgaggggtggtttttggtcaattcttgacctgaaatc 26583618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 46821829 - 46821918
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| ||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||    
T  46821829 aacaagccggccctagttttctctctctaggttttctcttataattttttcattgaggggtggttttgggtcaattcttgacctgaaatc 46821918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 2843489 - 2843402
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaa 217  Q
    |||||| ||| | ||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  2843489 aacaaggcggtcctagttttctctctctaggttttctcttacaatttcttcattgaagggtggttttgggtcaattcttgacctgaaa 2843402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 32684519 - 32684589
Alignment:
Q  149 tctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32684519 tctctctctaggttttctcttacggtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 32684589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 12539217 - 12539128
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| || || ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12539217 aacaagccgaccctagttttctctctctagattttctcttccagtttcttcattgaggggtggtttttggtcaattcttgacctgaaatc 12539128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 26492187 - 26492268
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaat 218  Q
    ||||| ||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26492187 cggccctagttttatctctctagattttgtcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaat 26492268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 42311111 - 42311184
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  42311111 ttttctctctctaggttttctcttagagtttcttcactgaggggtggttttgggtcaattcttgacctgaaatc 42311184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 20116398 - 20116487
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||| |||| ||||||||||  |||||||||| |||||||| |||||||||||||| |||||||||||||    
T  20116398 aacaagtcggccctagttttctctctctatgttttctcttcaagtttcttcaatgaggggtagttttgggtcaatttttgacctgaaatc 20116487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 22928132 - 22928043
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| || |||||||| ||||||||||||||| | |||||||||||  ||||||||||||||||||||||||||||||||||    
T  22928132 aacaagccggccctaattttctctctctaggttttctcttcccgtttcttcattagggggtggttttgggtcaattcttgacctgaaatc 22928043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 35496421 - 35496348
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  35496421 ttttctctctttaggttttctcttactgtttcttcattgaggggtggttttgggtcaattcttgacctaaaatc 35496348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 1449091 - 1449003
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaat 218  Q
    |||||| ||||| ||||||||||| |||||||||| |||| ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  1449091 aacaagccggccctagttttctctctctaggttttttcttccagattctttgttgaggggtggttttgggtcaattcttgacctgaaat 1449003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 1485516 - 1485429
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| || ||||||||  |||||||||||||| | |||||||||||| ||||||||||||||| |||||||||||| |||||    
T  1485516 aacaagtcggccctaattttctct--ctaggttttctcttcccgtttcttcattggggggtggttttgggttaattcttgacctaaaatc 1485429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 46338898 - 46338956
Alignment:
Q  160 gttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaat 218  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  46338898 gttttctcttacaatttcttcattgaggggtagttttgggtcaattcttgacctgaaat 46338956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 21266214 - 21266296
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||||||| | || ||||| |||| ||||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  21266214 cggccctagttttctctctttaagttttttcttccagtttctttattgaggggtggttttgggtcaattattgacatgaaatc 21266296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 48207720 - 48207806
Alignment:
Q  131 acaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||||||||||| | |||||||||||||  || || ||||| || ||||||||||||||| |||||||||||||||||    
T  48207720 acaagtcggccatagttttctctctttaggttttctcttctagatttttcatcga-gggtggttttgggtc-attcttgacctgaaatc 48207806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 6558758 - 6558817
Alignment:
Q  157 taggttttctcttacagtttcttcattgagggg-tggttttgggtcaattcttgacctga 215  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  6558758 taggttttctcttacaattttttcattgagggggtggttttgggtcaattcttgacctga 6558817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 14628139 - 14628069
Alignment:
Q  133 aagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaa 203  Q
    ||||||||| |||||||| || |||| ||||| ||||||||| |||||||||| |||||||||||||||||    
T  14628139 aagtcggccctagttttcgctctctaagttttttcttacagtgtcttcattgaagggtggttttgggtcaa 14628069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 23085353 - 23085424
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||| ||||| |||||||    
T  23085353 ttttctctctctaggttttctcttcc-gtttcttcattg-ggggtggttttgggtcaattattgacttgaaatc 23085424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 35667492 - 35667412
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgac 211  Q
    |||||||||||| ||||||||| ||| || ||||||||||  | ||| ||||||||||||||||||||| ||||||||||||    
T  35667492 aacaagtcggccctagttttcttttt-taagttttctcttctaattttttcattgaggggtggttttggatcaattcttgac 35667412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 17499906 - 17499834
Alignment:
Q  132 caagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaat 204  Q
    |||||||||| ||||||| ||| | ||| |||||||||  ||||||||||||||||||| |||||||||||||    
T  17499906 caagtcggccttagttttttctctttagattttctcttctagtttcttcattgaggggtagttttgggtcaat 17499834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 17553308 - 17553380
Alignment:
Q  132 caagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaat 204  Q
    |||||||||| ||||||| ||| | ||| |||||||||  ||||||||||||||||||| |||||||||||||    
T  17553308 caagtcggccttagttttttctctttagattttctcttctagtttcttcattgaggggtagttttgggtcaat 17553380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 433936 - 433865
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| | |||||||||||||||   ||||||||||||  ||||||||||||||||||| |||||||||||||    
T  433936 ttttctttctctaggttttctcttctggtttcttcattg--gggtggttttgggtcaatttttgacctgaaatc 433865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 32522192 - 32522104
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| |||||||  || ||||||||||||||| ||  |||||||||||||| ||||||| |||| | | |||||||||||||    
T  32522192 aacaagtcggccttagtttttcctctctaggttttctcttccaacttcttcattgagggatggttttaggtcgaat-ttgacctgaaatc 32522104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 42067308 - 42067233
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||| || ||||||||||  || || | |||||| ||||| |||||||||||||||||||||||||||    
T  42067308 tagttttctcttt-taagttttctcttctagattttccattgaagggtgattttgggtcaattcttgacctgaaatc 42067233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 23425579 - 23425544
Alignment:
Q  184 gaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  23425579 gaggggtggttttgggtcaattcttgacctgaaatc 23425544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 31236030 - 31235964
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggg-gtggttttgggtcaattcttgacctgaaatct 220  Q
    ||||| ||||||||| || ||||||||||||||| ||| ||||||||||||| ||||| ||||||||    
T  31236030 tctagattttctcttccattttcttcattgagggagtgattttgggtcaatttttgacatgaaatct 31235964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 42408206 - 42408266
Alignment:
Q  160 gttttctcttacagtttctt-cattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||| ||||||| || ||||||||| ||||||| ||||| ||||||||||||||||    
T  42408206 gttttctctcacagtttttttcattgagggatggtttttggtcagttcttgacctgaaatc 42408266  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 6001862 - 6001925
Alignment:
Q  157 taggttttctcttacagtttcttcattga-ggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||| || |||||| ||||| |||||| |||||| |||||| |||||||||||||    
T  6001862 taggttttctcttccattttctttattgaaggggtgattttggatcaatttttgacctgaaatc 6001925  T

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Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 45199277 - 45199204
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| |||| ||||||||||  || || | |||| |||||||||||||| |||| | |||||||||||||    
T  45199277 ttttctctctctaagttttctcttctagattttccattcaggggtggttttggatcaactattgacctgaaatc 45199204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 45630089 - 45630030
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaa 203  Q
    ||||||||||| |||| |||||||| || ||||| |||||||| |||||||||||| ||||    
T  45630089 tagttttctctctctacgttttctcctagagtttattcattga-gggtggttttggatcaa 45630030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 9986596 - 9986520
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9986596 tagttttctctctctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 9986520  T

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Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 36233824 - 36233913
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  36233824 aacaagtcggccctagttttctctctctagattttctcttgcaatttcttcattgaggggtggttttgggtcaattcatgacctgaaatc 36233913  T

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Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 2808730 - 2808643
Alignment:
Q  132 caagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| || |||||| |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  2808730 caagtcggccctaattttctttttctaggttttttctttcattttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 2808643  T

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Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 8971874 - 8971801
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8971874 ttttctctctttaggttttttcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 8971801  T

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Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 20047343 - 20047254
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| |||||||| |||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||    
T  20047343 aacaagacggccataattttctctctctaggttttctcttaccgtttcttcattggggggtagttttggatcaattcttgacctgaaatc 20047254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 27249400 - 27249324
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||    
T  27249400 tagttttctctctctaggttttctcttacaatttcttcattgaagggtggttttgggtcaatacttgacctgaaatc 27249324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 41713014 - 41712938
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||    
T  41713014 tagttttctctatctaggttttctcttacaatttcttcattgaggggtggttttgggttaattcttgacgtgaaatc 41712938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 3270490 - 3270401
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||  ||| ||||||| ||| |||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  3270490 aacaagtgagccttagttttttctctctaagttttctcttacgatttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 3270401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 6173451 - 6173540
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| || || ||||||||||| |||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  6173451 aacaagccgaccctagttttctctctctaggttttcttttacggtttcttcattgaggggtggttttcggtctattcttgacctgaaatc 6173540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 21570670 - 21570581
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| ||||||||| | ||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  21570670 aacaaggcggccctagttttctgtctctaggttttctcttccagatttttcattgagtggtggttttgggtcaattcttgacctgaaatc 21570581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 34598806 - 34598895
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| || |||||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||    
T  34598806 aacaagccggccctaattttctctctctaggttttctcttaccgtttcttcgttgaggggtggttttggatcaattcttgacctcaaatc 34598895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 31581964 - 31581888
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattc 206  Q
    |||||||||||| || |||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31581964 aacaagtcggccttaattttttctctctaggttttctcttactgtttcttcattgaggggtggttttgggtcaattc 31581888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 459509 - 459447
Alignment:
Q  157 taggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  459509 taggttttctcttccagtttcttcattgaggggtggttttgggtcaatttttgacctgaaatc 459447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 40660183 - 40660102
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  40660183 cggccctagttttctctttttagattttctcttagagtttcttcattga-gggtggttttgagtcaattcttgacctgaaatc 40660102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 30420496 - 30420585
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| |||| |||||| |||||||||| | ||||| ||||||||||||||||||||||||| |||||| |||||||||||||    
T  30420496 aacaagccggccctagtcttctctctctaggtttttttttacaatttcttcattgaggggtggttttggatcaatttttgacctgaaatc 30420585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 33229250 - 33229161
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| |||||| |||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| || |||||    
T  33229250 aacaagccggccctagtttcctctctctaggttttctcttactgtttcttcattgaagggtggttttgggtcaattattgagctaaaatc 33229161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 40626284 - 40626200
Alignment:
Q  135 gtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| ||||||||||| | ||||||||||||| || |||||| ||||||||||| ||||||||| |||||||||||||||||    
T  40626284 gtcggccctagttttctctctttaggttttctcttccattttcttaattgaggggtgattttgggtctattcttgacctgaaatc 40626200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 3725010 - 3725089
Alignment:
Q  140 ccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| |||||||||| || ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||    
T  3725010 ccataattttctctttttaagttttctcttacaatttctttattgaggggtggttttgggtcaatttttgacctaaaatc 3725089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 25086868 - 25086942
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||  |||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  25086868 tagttttctct--ctaggttttctcttccggtttcttcatttaggggtggttttgggtcaattattgacctgaaatc 25086942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 45128040 - 45128112
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||||||||||||||| |  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  45128040 ttttctctctctaggttttctcttcccatttcttcattgaggg-tggttttgggtcaattcttgacctgaaatc 45128112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 7015941 - 7015883
Alignment:
Q  161 ttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  7015941 ttttctcttacaatttcttcattgggggttggttttgggtcaattcttgacctgaaatc 7015883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 32680826 - 32680755
Alignment:
Q  147 tttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| ||||||||||||||| | |||||||||||| ||||||||||| |||| |||||||||||||||||    
T  32680826 tttctctctctaggttttctcttcccgtttcttcattg-ggggtggttttcggtcgattcttgacctgaaatc 32680755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 9374780 - 9374722
Alignment:
Q  161 ttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||  ||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  9374780 ttttctcttctagtttcttcattgagggatggttttgggtcaatttttgacatgaaatc 9374722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 32913075 - 32913150
Alignment:
Q  144 agttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| | |||||||||||||||  || || |  || ||||||||||||||| ||||||||||||||||||||    
T  32913075 agttttctttctctaggttttctcttctagattttaaatcgaggggtggttttggatcaattcttgacctgaaatc 32913150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 10248011 - 10248056
Alignment:
Q  157 taggttttctcttacagtttcttcattgaggggtggttttgggtca 202  Q
    ||||||||||||| || |||||| ||||||||||||||||||||||    
T  10248011 taggttttctctttcaatttctttattgaggggtggttttgggtca 10248056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 17319145 - 17319233
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||  ||||||| ||| |||||||||||||||  ||||| |||| ||| || ||| |||||||||||| |||||||||||||    
T  17319145 aacaagacggctctagttttttctctctaggttttctcttcgagttttttcaatga-ggatggatttgggtcaatttttgacctgaaatc 17319233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 39642121 - 39642032
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||||||||||| ||| | ||| |||| ||||  |  |||||| |||||| |||| ||||| |||||| |||||||||||||    
T  39642121 aacaagtcggccatagttttttctctttagattttttcttttaacttcttcgttgaggagtggctttggatcaatttttgacctgaaatc 39642032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 27949272 - 27949332
Alignment:
Q  160 gttttctcttacagtttcttcattgagggg-tggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| || |||||||||| ||||| || ||||||| |||||||||||||||||||    
T  27949272 gttttctcttccattttcttcattaagggggtgattttgggacaattcttgacctgaaatc 27949332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 37614374 - 37614298
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| ||| ||||  ||||||||| || |||||||| |||||||| ||||||| | |||| |||||||||||||    
T  37614374 tagttttttctctctaacttttctcttccattttcttcagtgaggggtagttttggattaatttttgacctgaaatc 37614298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 219
Target Start/End: Original strand, 4228011 - 4228040
Alignment:
Q  190 tggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||||||||||||||||||    
T  4228011 tggttttgggtcaattcttgacctgaaatc 4228040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 4192671 - 4192743
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctga 215  Q
    ||||||||||| ||||||||||| |||  || || | ||| |||| |||||||||| |||||| |||||||||    
T  4192671 tagttttctctctctaggttttcccttctagattttccatcgaggtgtggttttggatcaatttttgacctga 4192743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 19193415 - 19193471
Alignment:
Q  133 aagtcggccatagttttctctttctaggttttctcttacagtttcttcattgagggg 189  Q
    |||||| || |||||||||||||||||||| |||||| || ||||||| || |||||    
T  19193415 aagtcgaccttagttttctctttctaggttctctcttccattttcttccttaagggg 19193471  T

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Target: scaffold0608 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 56 - 146
Alignment:
Q  129 taacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  56 taacaagtcgaccatagttttctctctctagcttttctcttacagtttctccattgaggggtggttttgggtcaattcttaacctgaaatc 146  T

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Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 9498864 - 9498775
Alignment:
Q  129 taacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9498864 taacaagtcggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattctt-acctgaaatc 9498775  T

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Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 11725511 - 11725593
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11725511 cggccctagttttctctctctagattttctctttcagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 11725593  T

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Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 9619620 - 9619531
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||  ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9619620 aacaagccggctctagttttctctctctagattttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 9619531  T

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Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 43890384 - 43890298
Alignment:
Q  133 aagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| || |||||||||||||    
T  43890384 aagtcggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttggatcattttttgacctgaaatc 43890298  T

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Target: chr8; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 44100194 - 44100105
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  44100194 aacaagccggccctagttttctctctctaggttttctctttcggtttcttcattgaggggtggttttgggtcgattcttgacctaaaatc 44100105  T

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Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 17949079 - 17949158
Alignment:
Q  140 ccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||    
T  17949079 ccatagttttctctctctaggttgtctcttacagtttcttcattgatgggtgattttgggtcaattattgacctgaaatc 17949158  T

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Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 42448284 - 42448201
Alignment:
Q  136 tcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||||||||| |||||||||| |||||||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  42448284 tcggccctagttttctctctctaggttttgtcttacagttttgtcattgaggggtggttttgggttaattcttgacctgaaatc 42448201  T

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Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 11196722 - 11196803
Alignment:
Q  138 ggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||| ||||||||||| ||||| |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11196722 ggccctagttttctctctctagtttttctcttctagtttcttcgttgaggggtggttttgggtcaattcttgacctgaaatc 11196803  T

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Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 14907173 - 14907097
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||||    
T  14907173 tagttttctctctctaggttttctcttacaatttcttcattgagggatgattttggatcaattcttgacctgaaatc 14907097  T

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Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 34611652 - 34611715
Alignment:
Q  156 ctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34611652 ctagtttttctcttacagtttcttcatcgaggggtggttttgggtcaattcttgacctgaaatc 34611715  T

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Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 44577867 - 44577947
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  44577867 cggccctagttttctct--ctaggttttctcttactgtttcttcattgaggggtggttttgggtcaatttttgacctaaaatc 44577947  T

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Target: chr8; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 4808816 - 4808874
Alignment:
Q  160 gttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaat 218  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4808816 gttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaat 4808874  T

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Target: chr8; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 33342259 - 33342348
Alignment:
Q  128 ctaacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||||| |||||||||||  ||||||||| ||||  |||||||||||||||||||||||||||||||||| || ||||||||||    
T  33342259 ctaacaagccggccctagttttctct--ctaggttttttcttcgagtttcttcattgaggggtggttttgggtcaatttttaacctgaaatc 33342348  T

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Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 32724752 - 32724661
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattga-ggggtggttttgggtc-aattcttgacctgaaatc 219  Q
    ||||||||| || ||||||||||| ||| |||||||||||||||||||| |||||| |||||||||||||||| |||| |||||||||||||    
T  32724752 aacaagtcgaccctagttttctctctctgggttttctcttacagtttctccattgagggggtggttttgggtcaaattattgacctgaaatc 32724661  T

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Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 2655717 - 2655780
Alignment:
Q  156 ctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  2655717 ctagtttttctcttacaatttcttcattgagcggtggttttgggtcaattcttgacctgcaatc 2655780  T

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Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 11464024 - 11464083
Alignment:
Q  160 gttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  11464024 gttttctcttacaatttcttcattaaggggtggttttaggtcaattcttgacctgaaatc 11464083  T

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Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 29777051 - 29777140
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| || |||||||| ||||||||||||| | | ||||||||||||  | ||||||||||||||||| ||||| |||||||    
T  29777051 aacaagtcggccctaattttctctctctaggttttctcatcctgtttcttcattggtgagtggttttgggtcaattattgacatgaaatc 29777140  T

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Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 28239679 - 28239744
Alignment:
Q  155 tctaggttttctcttacagtttcttcattga-ggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||| || |||||||||||| |||||| ||||||||||||| |||||||||||||    
T  28239679 tctaggttttctcttccattttcttcattgagggggtgattttgggtcaatttttgacctgaaatc 28239744  T

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Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 33895911 - 33895983
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttga 210  Q
    ||||| || |||||||| |||||||||||||||   |||||||||||| |||||||||||||||||||||||||    
T  33895911 cggccctaattttctctctctaggttttctcttcgcgtttcttcattg-ggggtggttttgggtcaattcttga 33895983  T

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Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 19876039 - 19876122
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaat 218  Q
    |||||| ||||| || ||||||||  ||||||||||||||  | |||||  ||||||||||||||||||||||||||||||||||||||    
T  19876039 aacaagccggccctaattttctct--ctaggttttctcttg-attttct--attgaggggtggttttgggtcaattcttgacctgaaat 19876122  T

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Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 9072555 - 9072628
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||||| ||||||| |   |||||||||||| |||||||||||||||||||| ||||| |||||||    
T  9072555 ttttctctctctagattttctcatctcgtttcttcattggggggtggttttgggtcaatttttgacttgaaatc 9072628  T

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Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 27747358 - 27747285
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||| ||| ||||||||||||||| ||  ||||||||| |||||| |||||||||||||| ||||| |||||||    
T  27747358 ttttttctctctaggttttctcttccaacttcttcattaaggggtagttttgggtcaatttttgacttgaaatc 27747285  T

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Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 15597416 - 15597340
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| ||| | ||||||||||||| |||| | || ||||||||||||||||  ||||||| |||||||||||||    
T  15597416 tagttttttctctataggttttctcttccagtatttttattgaggggtggttttcagtcaatttttgacctgaaatc 15597340  T

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Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 35580282 - 35580361
Alignment:
Q  133 aagtcggccatagttttctctttctaggttttctcttacagtttcttcattgag-gggtggttttgggtcaattcttgac 211  Q
    ||||||||| || |||| ||| | |||||||| |||| || ||||||||||||| ||||||||||||||||||| |||||    
T  35580282 aagtcggccctaattttttctctttaggttttttcttccaatttcttcattgagagggtggttttgggtcaatttttgac 35580361  T

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Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 12173358 - 12173413
Alignment:
Q  163 ttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| ||||||||| ||||| |||||||||||||| | |||||||||||||    
T  12173358 ttctcttacattttcttcatcgaggg-tggttttgggtcaacttttgacctgaaatc 12173413  T

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Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 12417786 - 12417841
Alignment:
Q  163 ttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| ||||||||| ||||| |||||||||||||| | |||||||||||||    
T  12417786 ttctcttacattttcttcatcgaggg-tggttttgggtcaacttttgacctgaaatc 12417841  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 12184134 - 12184199
Alignment:
Q  154 ttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||| |||||| || | |||| |||||| |||||||||||||||| | |||||| ||||||    
T  12184134 ttctaggttatctctttcattgtctttattgagaggtggttttgggtcaacttttgacccgaaatc 12184199  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 12428562 - 12428627
Alignment:
Q  154 ttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||| |||||| || | |||| |||||| |||||||||||||||| | |||||| ||||||    
T  12428562 ttctaggttatctctttcattgtctttattgagaggtggttttgggtcaacttttgacccgaaatc 12428627  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 15046719 - 15046804
Alignment:
Q  135 gtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggtttt-gggtcaattcttgacctgaaatc 219  Q
    ||||||| || |||| ||| | ||| |||||||||  |||||||||||||||||||| |||| ||||||||| ||||  |||||||    
T  15046719 gtcggccctatttttttctctttagattttctcttcaagtttcttcattgaggggtgattttggggtcaatttttgatatgaaatc 15046804  T

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Target: scaffold0003 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 362056 - 361967
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  362056 aacaagccggccttagttttctctctttaggttttctcttacagtttcttcattgaggggtggttttgagtcaattcttgacctgaaatc 361967  T

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Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 30371542 - 30371631
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||    
T  30371542 aacaagtcggccctagttttctctatctaggttttctcttacaatttcttcattgaggggtggttttgggtcaatatttgacctgaaatc 30371631  T

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Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 34881528 - 34881617
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  34881528 aacaagtcggccctagttttctctctccaggttttctcttacagtttctccattgaggggtggttctgggtcaattcttgacctgaaatc 34881617  T

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Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 7887199 - 7887110
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| ||||||||||||||||  ||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  7887199 aacaagccggccctagttttctctttctaacttttctcttccagtttcttcatcgaggggtggttttgggtccattcttgacctgaaatc 7887110  T

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Target: chr5; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 27267122 - 27267033
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||| ||||||||||||||| | |||||||||  || |||||||||||||||||||||||||||||||||    
T  27267122 aacaagtcggccctagttttctctctctaggttttctcttcccgtttcttcaccgaagggtggttttgggtcaattcttgacctgaaatc 27267033  T

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Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 42579695 - 42579784
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| | ||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  42579695 aacaagcccgccctagttttctctctctaggttttctcttacagtttctccattgaggggtggttttgggtcaattattgacatgaaatc 42579784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 19260070 - 19259983
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| || ||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  19260070 aacaagccggccctaattttctct--ctaggttttctcttacggtttcttcgttgaggggtggttttgggtcaattcttgacctgaaatc 19259983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 7241600 - 7241687
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaa 217  Q
    |||||| ||||| || |||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||||    
T  7241600 aacaagccggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaattcttaacctgaaa 7241687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 7246776 - 7246863
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaa 217  Q
    |||||| ||||| || |||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||||    
T  7246776 aacaagccggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaattcttaacctgaaa 7246863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 18677712 - 18677639
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||  |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  18677712 ttttctccctctaggttttcttttaccgtttcttcattgaggggtggttttgggtcaattattgatctgaaatc 18677639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 19281206 - 19281117
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| || |||||||| ||||||||||||| | | |||||||||||| ||||||||||||||| |||| |||||| ||||||    
T  19281206 aacaagtcggccctaattttctctctctaggttttctcatcccgtttcttcattggggggtggttttgggtaaatttttgaccggaaatc 19281117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 36344751 - 36344662
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| || |||| ||| ||||| ||||||||| || |||||||||||||||||||||||| ||| ||||||||||| |||||    
T  36344751 aacaagtcggccctaattttttctctctagattttctcttccaatttcttcattgaggggtggttttgagtcgattcttgacctaaaatc 36344662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 41184706 - 41184617
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| || |||||| | |||||||||||||||||||||||| ||||||||| || ||||||||||||| ||||| |||||||    
T  41184706 aacaagccggccctaattttctttctctaggttttctcttacagtttctccattgagggatgattttgggtcaatttttgacatgaaatc 41184617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 21060530 - 21060454
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| |||||||||||||||  || || ||||| ||| ||||||||||||||||||||||| ||||||||    
T  21060530 tagttttctctctctaggttttctcttctagatttttcatcgagtggtggttttgggtcaattcttgatctgaaatc 21060454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 26578080 - 26578156
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| || || |||||||||||| |||||| ||||| || ||||||| ||||||||||||||||||||||    
T  26578080 tagttttctctctccagattttctcttacaatttctttattgatggatggtttttggtcaattcttgacctgaaatc 26578156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 28235428 - 28235492
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  28235428 tctagattttctcttccagtttctttattgaggggtggttttgggtcaatcattgacctgaaatc 28235492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 16981138 - 16981197
Alignment:
Q  160 gttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| || |||||||||||||||||||| |||| ||||||||||||||||||||    
T  16981138 gttttctcttccattttcttcattgaggggtggtattggatcaattcttgacctgaaatc 16981197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 7150584 - 7150508
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| ||||||||||||||| | |||||||||||  ||| ||||||||| | |||| |||||||||||||    
T  7150584 tagttttctctctctaggttttctcttcccgtttcttcattcggggatggttttggattaatttttgacctgaaatc 7150508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 10649317 - 10649360
Alignment:
Q  176 tcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  10649317 tcttcattgaggggtgattttgggtcaattcttgacctgaaatc 10649360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 27751782 - 27751821
Alignment:
Q  180 cattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27751782 cattgaggggtggttttgggtcaattcttgacctgaaatc 27751821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 43262081 - 43261990
Alignment:
Q  128 ctaacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||| | ||||||||||| ||||||||||| ||  || ||| ||||||||| |||| ||||| |||||||||| ||||||||||    
T  43262081 ctaacaagccggtcctagttttctctctctaggttttcactatcaattttttcattgagaggtgattttgagtcaattcttaacctgaaatc 43261990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 3271663 - 3271580
Alignment:
Q  135 gtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| || |||||||| ||||  |||| ||||| |||||||||||||| ||||| |||| |||||||||||||| |||||||    
T  3271663 gtcggccctaattttctctctctaaattttttcttatagtttcttcattga-gggtgattttaggtcaattcttgacatgaaatc 3271580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 35676324 - 35676248
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| |||   ||||||||||| ||||||||||||| |||||||||||| |||||| || |||| |||||    
T  35676324 tagttttctctctctgaattttctcttactgtttcttcattgaagggtggttttggatcaatttttaacctaaaatc 35676248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 11767651 - 11767714
Alignment:
Q  157 taggttttctcttaca-gtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||| || |||||||||||| | ||||||||| |||||||| ||||||| |||||    
T  11767651 taggttttctcttccaagtttcttcattgtgtggtggttttaggtcaatttttgacctaaaatc 11767714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 4953914 - 4953981
Alignment:
Q  146 ttttctctttctaggttttct---cttacagtttcttcattgaggggtggttttgggtcaattcttgac 211  Q
    |||||||| ||||||||||||   ||| | |||| ||||||| ||||||||||||||||||||||||||    
T  4953914 ttttctctctctaggttttcttctctttccgttttttcattg-ggggtggttttgggtcaattcttgac 4953981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 11192240 - 11192274
Alignment:
Q  185 aggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||||||||| |||||||||||||    
T  11192240 aggggtggttttgggtcaatttttgacctgaaatc 11192274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 781264 - 781296
Alignment:
Q  187 gggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||||||||||||    
T  781264 gggtggttttggttcaattcttgacctgaaatc 781296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 4178377 - 4178466
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  4178377 aacaagtcggccctagttttctctctctaggttttttcttactgtttcttcattgaggggtggttttgggtcaattcttgacctaaaatc 4178466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 36905932 - 36906023
Alignment:
Q  128 ctaacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||||| || |||||||| |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||    
T  36905932 ctaacaagtcggccctaattttctctctctaggttttctcttacaatttcttcattgatggatggttttgggtcaattcttgacctgaaatc 36906023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 12115906 - 12115995
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||  ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  12115906 aacaagtcggctctagttttctctctctaggttttcttttacaatttcttcattgaggggtggttttgagtcaattcttgacctgaaatc 12115995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 51202511 - 51202422
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||| ||| | ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  51202511 aacaagtcggccttagttttttctctttaggttttctcttacagtttctttattgaggggtgattttgggtcaattcttgacctgaaatc 51202422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 32607280 - 32607369
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattga-ggggtggttttgggtcaattcttgacctgaaat 218  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  32607280 aacaagccggccctagttttctctctctagattttctcttacaatttcttcattgagggggtggttttgggtcaattcttgacctgaaat 32607369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 39917645 - 39917569
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  39917645 tagttttctctctctaggttttcccttacagtttcttcactgaggagtggttttgggtcaattcttgacctgaaatc 39917569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 44907648 - 44907572
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  44907648 tagttttctctctctaggttttctcctacaatttcttctttgaggggtggttttgggtcaattcttgacctgaaatc 44907572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 4172379 - 4172457
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattctt 208  Q
    |||||||||||| ||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  4172379 aacaagtcggccctagttttctctctctagattttttcttactgtttcttcattgaggggtggttttgggtcaattctt 4172457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 46934455 - 46934544
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| || |||||||| |||||||||||||||  | ||||||||||||||||||||||| |||||||| |||||||||||||    
T  46934455 aacaagtcggccctaattttctctctctaggttttctcttctactttcttcattgaggggtggtttttggtcaatttttgacctgaaatc 46934544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 25162262 - 25162338
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |||||||    
T  25162262 tagttttctctctctaggttttctcttacagtttcttcactgaggggtggttttgtgtcaattcttgatttgaaatc 25162338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 25631776 - 25631700
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| |||||    
T  25631776 tagttttctctctctaggttttctcttactatttcttcattgaggggtggttttgggtcaatttttgacctaaaatc 25631700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 47980905 - 47980841
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  47980905 tctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatc 47980841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 47990192 - 47990128
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  47990192 tctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatc 47990128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 47999479 - 47999415
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  47999479 tctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatc 47999415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 48008766 - 48008702
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  48008766 tctaggttttctcttgcagtttcttcattgagtggtggttttgggtcaatttttgacctgaaatc 48008702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 38855298 - 38855217
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacc 212  Q
    |||||| || || ||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  38855298 aacaagccgaccctagttttctctctctaggttttctcttactatttcttcattgaggggtggttttgggtc-attcttgacc 38855217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 2342332 - 2342391
Alignment:
Q  157 taggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaa 216  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  2342332 taggttttctcttacagtttcttcgttgaggggtggttttgggtcaattctaaacctgaa 2342391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 29503275 - 29503364
Alignment:
Q  131 acaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgagggg-tggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||| |||||||||||||||| ||||||||||  || || ||||| |||||| || |||||||||||||||||||||||||||    
T  29503275 acaagccggccctagttttctctttctaagttttctcttctagatttttcatcgagggggtgattttgggtcaattcttgacctgaaatc 29503364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 14464350 - 14464409
Alignment:
Q  160 gttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| ||||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  14464350 gttttcttttacaattttttcattgaagggtggttttgggtcaattcttgacctgaaatc 14464409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 49552470 - 49552396
Alignment:
Q  145 gttttctctttctaggtttt-ctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||| | |||||||| ||||| | ||||||||||||| |||||||||||||||||||||||||||||||||    
T  49552470 gttttctctctttaggtttttctcttcc-gtttcttcattgatgggtggttttgggtcaattcttgacctgaaatc 49552396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 38440801 - 38440750
Alignment:
Q  168 ttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||||    
T  38440801 ttacagtttcttcattgaatggtggttttgagtcaattcttgacctgaaatc 38440750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 25849641 - 25849722
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||| ||| |||||||||| |||| ||| ||||| ||||||||||||||||| ||||||| ||||| |||||||    
T  25849641 cggccctagtttt-tctctctaggttttttcttccagcttcttaattgaggggtggttttgagtcaatttttgacttgaaatc 25849722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 36735391 - 36735325
Alignment:
Q  153 tttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||||||||  ||||||||||||||| ||||||||| |||||||| || ||||||||||    
T  36735391 tttctaagttttctcttctagtttcttcattgagaggtggtttttggtcaattttttacctgaaatc 36735325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 30649000 - 30648917
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtgg-ttttgggtcaattcttgacctg 214  Q
    |||||||||||| || |||| ||| ||||||||||||||| | |||||||||||| ||||||| ||||||||||||| ||||||||    
T  30649000 aacaagtcggccctaattttatctctctaggttttctctt-ccgtttcttcattg-ggggtggtttttgggtcaatttttgacctg 30648917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 50611666 - 50611590
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| ||| | || |||||||||||  |||||||||||||| | |||||||||||||||| ||||||| |||||    
T  50611666 tagttttttctctttaagttttctcttattgtttcttcattgagagatggttttgggtcaattattgacctaaaatc 50611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 35499433 - 35499375
Alignment:
Q  161 ttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| |||||  |||||||||||||||||||||| |||||||| || ||||||||||    
T  35499433 ttttcttttacaaattcttcattgaggggtggtttttggtcaattttttacctgaaatc 35499375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 37169085 - 37169132
Alignment:
Q  172 agtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||||||||||| |||||| |||||| || ||||||||||    
T  37169085 agtttcttcattgaggggtgattttggatcaattttttacctgaaatc 37169132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 53327889 - 53327843
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgagggg 189  Q
    ||||||||||||||||| || |||||| || ||||||||||||||||    
T  53327889 tagttttctctttctagattctctctttcattttcttcattgagggg 53327843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 3850661 - 3850628
Alignment:
Q  186 ggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||| ||||||||||||||||||||    
T  3850661 ggggtggttttggatcaattcttgacctgaaatc 3850628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 31793920 - 31793965
Alignment:
Q  157 taggttttctcttacagtttcttcattgaggggtggttttgggtca 202  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| ||||    
T  31793920 taggttttctcttccagtttctttattgacgggtggttttgagtca 31793965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 40646507 - 40646596
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  40646507 aacaagccggccctagttttctctctctaggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctaaaatc 40646596  T

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Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 19716158 - 19716069
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||||| | |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19716158 aacaagtcggccctagttttctctctttaggttttttcttacaatttcttcattgagaggtggttttgggtcaattcttgatctgaaatc 19716069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 33291681 - 33291592
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||| | ||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33291681 aacaagtcggccctagttttctttctctagattttttcttatagttttttcattgaggggtggttttgggtcaattcttgacctgaaatc 33291592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 35584883 - 35584794
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||| ||||||||| | |||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||    
T  35584883 aacaagtccgccctagttttctttctctaggttttctcttacaatttcttcattgaggggtgattttgggtcaattcttaacctgaaatc 35584794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 7342548 - 7342630
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| || |||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||| |||||||||||||    
T  7342548 cggccctaattttctctctctaggttttctcttcccgtttcttcattggggggtggttttgggtcaatttttgacctgaaatc 7342630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 40881256 - 40881186
Alignment:
Q  149 tctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  40881256 tctctctctaggttttctcttaccgtttcttcattgagggatggttttgggtcaattcttgacctaaaatc 40881186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 51871684 - 51871772
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| || |||||||| |||||||||||||||   |||||||||||| |||||||||||||||||||||||||||| |||||    
T  51871684 aacaagtcggccctaattttctctctctaggttttctcttctcgtttcttcattg-ggggtggttttgggtcaattcttgacctaaaatc 51871772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 50148204 - 50148280
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||| || ||||||||    
T  50148204 tagttttctctctctagattttctcttataatttcttcattgaggggtggttttgggtcaattctagatctgaaatc 50148280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 50166360 - 50166273
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaat 218  Q
    |||||| || ||||| |||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||||||||    
T  50166360 aacaagccgcccataattttctctctctaggttttctcttcccgtttcttcattg-ggggtggttttgggtcaattattgacctgaaat 50166273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 50272372 - 50272313
Alignment:
Q  160 gttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  50272372 gttttctcttacaatttcttcattgaagggtggttttgggtcaattcttgacctgaaatc 50272313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 5701083 - 5701165
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||||||| |||| ||||||||||||| |||||| |||||||||||  ||||||||||| ||||||||||||||    
T  5701083 cggccctagttttctctctctaagttttctcttacaatttctttattgaggggtgactttgggtcaatacttgacctgaaatc 5701165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 30818588 - 30818518
Alignment:
Q  149 tctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| |||| ||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  30818588 tctctctctaagttttcttttacagtttcttcattgaggggtagttttgggtcaattattgacctgaaatc 30818518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 5324819 - 5324730
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||| || |||||||| ||||| |||||||||  ||||||||||||||||| || |||||||||||||||||||||| ||||    
T  5324819 aacaagtcagccctaattttctctctctagattttctcttcaagtttcttcattgagggatgattttgggtcaattcttgacctggaatc 5324730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 51868891 - 51868818
Alignment:
Q  146 ttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| | ||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  51868891 ttttctctctttaggttttctcttcccgtttcttcattggggggtggttttgggttaattcttgacctgaaatc 51868818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 18569547 - 18569491
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgac 211  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  18569547 tctaggttttctcttccagtttcttcattgaggggtggttttgggtcaatttttgac 18569491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 30878924 - 30878979
Alignment:
Q  160 gttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctga 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  30878924 gttttctcttacaatttcttcattgaggggtggttttgggtcaatttttgacctga 30878979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 9172307 - 9172396
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| || ||||||||  ||| |||||||| | |  ||||||||||| ||||||||||||||||||||||||||||||||||    
T  9172307 aacaagccggccctaattttctctcactaagttttctcatcccatttcttcattggggggtggttttgggtcaattcttgacctgaaatc 9172396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 9180289 - 9180378
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||| ||||| || ||||||||  ||| |||||||| | |  ||||||||||| ||||||||||||||||||||||||||||||||||    
T  9180289 aacaagccggccctaattttctctcactaagttttctcatcccatttcttcattggggggtggttttgggtcaattcttgacctgaaatc 9180378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 14545340 - 14545428
Alignment:
Q  131 acaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||| ||||||||||| |||||||||||||||  || || | ||| ||| |||||||||| |||||||||||||||||||||    
T  14545340 acaagccggccctagttttctctctctaggttttctcttctagattttccatcgagcggtggttttgtgtcaattcttgacctgaaatc 14545428  T

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Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 19723178 - 19723241
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  19723178 tctaggttttctcttatagtttcttcattga-gggtggttttgggtcaattattgacttgaaatc 19723241  T

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Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 25728187 - 25728132
Alignment:
Q  164 tctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||    
T  25728187 tctcttacaatttcttcaatgacgggtggttttgggtcaattcttgacctgaaatc 25728132  T

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Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 45426310 - 45426235
Alignment:
Q  145 gttttctctttctaggttttctcttacagtttcttcattga-ggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||| |||||||||||| || ||||||||||||||| |||||||||||||||||||||||||  |||||||    
T  45426310 gttttttctctctaggttttcttttccagtttcttcattgagggggtggttttgggtcaattcttgatttgaaatc 45426235  T

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Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 11453773 - 11453843
Alignment:
Q  149 tctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||  |||||||| ||||| |||||||    
T  11453773 tctctctctaggttttctctttcagtttcttcattgagggatggtttctggtcaatttttgacttgaaatc 11453843  T

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Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 25406539 - 25406457
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| || |||||| | |||| ||||| |||| | |||||||||||| |||||| |||||||||||||||||||||||||||    
T  25406539 cggccttaattttctttctctaagttttttcttcccgtttcttcattggggggtgattttgggtcaattcttgacctgaaatc 25406457  T

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Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 45806072 - 45805982
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgagggg-tggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||| | || |||||||| ||||| ||||||||| | ||||||| |||| |||| |||||||||||||||| |||| ||||||||    
T  45806072 aacaagtcggtcctaattttctctctctagattttctcttcccgtttctttattgggggggtggttttgggtcaatttttgatctgaaatc 45805982  T

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Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 31836685 - 31836738
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcatt 183  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  31836685 aacaagccggccctagttttctctctctaggttttctcttacaatttcttcatt 31836738  T

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Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 38520771 - 38520706
Alignment:
Q  155 tctaggttttctcttacagtttcttcattga-ggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||| |||||| || ||||||||||    
T  38520771 tctaggttttctctttcagtttcttcattaagggggtggttttggatcaattttttacctgaaatc 38520706  T

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Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 7312319 - 7312272
Alignment:
Q  171 cagtttcttcattgaggggtggttttgggtcaattcttgacctgaaat 218  Q
    |||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  7312319 cagtttcttcattgaggggtagttttgggtcaatttttgacctaaaat 7312272  T

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Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 20266151 - 20266210
Alignment:
Q  161 ttttctcttacagtttcttcattgagggg-tggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||| || |||||    
T  20266151 ttttctcttacaatttcttcatcgagggggtggttttgggtcaattcttgatctaaaatc 20266210  T

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Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 48217449 - 48217520
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaa 203  Q
    |||||||||| | ||||||| | | |||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  48217449 aacaagtcggtcctagtttttt-tctctaggttttctcttacagtttcttcatcga-tggtggttttgggtcaa 48217520  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 28035008 - 28035047
Alignment:
Q  180 cattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  28035008 cattgagaggtggttttgggtcaattattgacctgaaatc 28035047  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 41081964 - 41081877
Alignment:
Q  133 aagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggtttt-gggtcaattcttgacctgaaatc 219  Q
    ||||||||| ||||||| ||| |||| ||||| || |  ||||||||| ||  ||||||||||| ||||||||| |||||||||||||    
T  41081964 aagtcggccttagttttttctctctaagttttttcatctagtttcttcgttatggggtggttttggggtcaatttttgacctgaaatc 41081877  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 39987217 - 39987290
Alignment:
Q  143 tagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaa 217  Q
    ||||||| ||| |||| ||||||||||  ||||| |||||||| | ||||||||||||||||| ||||| |||||    
T  39987217 tagttttttctctctaagttttctcttttagttt-ttcattgaagagtggttttgggtcaatttttgacatgaaa 39987290  T

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Target: scaffold0495 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 5239 - 5302
Alignment:
Q  155 tctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  5239 tctaggttttctcttcccgtttcttcattg-ggggtggttttgggtcaattcttgacctgaaatc 5302  T

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Target: scaffold0311 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 8535 - 8624
Alignment:
Q  128 ctaacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    |||||||| ||||| ||| |||||||  | |||||||||||| |||||||||||||||||||||||||||||| ||||||| || |||||||    
T  8535 ctaacaagccggccttagatttctct--ccaggttttctcttccagtttcttcattgaggggtggttttgggttaattcttaacttgaaatc 8624  T

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Target: scaffold0426 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 6161 - 6242
Alignment:
Q  137 cggccatagttttctctttctaggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||| || |||||||| | ||||||||||||| ||||||||||||||| |||||||||  |||||||||||||||| |||||    
T  6161 cggccctaattttctctctttaggttttctcttccagtttcttcattga-gggtggtttcaggtcaattcttgacctaaaatc 6242  T

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Target: scaffold0264 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 20624 - 20566
Alignment:
Q  160 gttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatc 219  Q
    ||||||||||  ||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  20624 gttttctcttcaagtttcttcatcgaggggtggtttt-ggtcaatttttgacctgaaatc 20566  T

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Target: scaffold0231 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 25678 - 25736
Alignment:
Q  130 aacaagtcggccatagttttctctttctaggttttctcttacagtttcttcattgaggg 188  Q
    |||||| ||||| ||||||||| | |||| | ||||||||||| |||||||||||||||    
T  25678 aacaagccggccgtagttttctttctctatgatttctcttacaatttcttcattgaggg 25736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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