View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9314_low_3 (Length: 216)
Name: NF9314_low_3
Description: NF9314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9314_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 3544731 - 3544544
Alignment:
| Q |
14 |
gtttcgtgttacttaaatgaccaaagatgtcgtcctcgaacccataaggacacatatccttaaatgagaggttagtcctatgaccaggatgaacatcatg |
113 |
Q |
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| T |
3544731 |
gtttcatgttactcaaatgaccaaagatgtcatcctcgaacccataaggacacatatccttaaatgagaggttagtcctatgaccaggatgaacatcatg |
3544632 |
T |
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| Q |
114 |
gttagccaaatttagatttctttctagatggtaccttaaggaaactgatttcagaaagtagccgtataatattgaagcgacatatatg |
201 |
Q |
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| T |
3544631 |
gttagccaaatttagatttctttctagatggtaccttaaggaaactgatttcagaaagtagccgtataatattgaagcgacatatatg |
3544544 |
T |
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