View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9316_high_1 (Length: 974)

Name: NF9316_high_1
Description: NF9316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9316_high_1
NF9316_high_1
[»] chr7 (5 HSPs)
chr7 (22-970)||(24907076-24908020)
chr7 (514-956)||(24889863-24890303)
chr7 (313-455)||(2212658-2212799)
chr7 (97-172)||(18264575-18264650)
chr7 (92-165)||(23869296-23869369)
[»] chr1 (4 HSPs)
chr1 (22-220)||(31302245-31302439)
chr1 (350-457)||(35154572-35154681)
chr1 (107-175)||(25244983-25245051)
chr1 (97-175)||(25275089-25275167)
[»] chr5 (5 HSPs)
chr5 (336-456)||(11026769-11026889)
chr5 (304-457)||(24403656-24403809)
chr5 (97-173)||(8933907-8933983)
chr5 (97-175)||(5708120-5708198)
chr5 (107-164)||(9272896-9272953)
[»] chr4 (3 HSPs)
chr4 (350-454)||(40350454-40350558)
chr4 (322-458)||(6217640-6217776)
chr4 (92-174)||(41189587-41189669)
[»] chr3 (4 HSPs)
chr3 (371-455)||(14988302-14988387)
chr3 (117-175)||(9129510-9129568)
chr3 (117-175)||(9137617-9137675)
chr3 (121-175)||(34365439-34365493)
[»] chr6 (1 HSPs)
chr6 (97-175)||(26857966-26858044)
[»] chr8 (2 HSPs)
chr8 (385-454)||(7561317-7561386)
chr8 (371-458)||(12768583-12768670)
[»] scaffold0102 (1 HSPs)
scaffold0102 (97-175)||(14385-14463)
[»] chr2 (2 HSPs)
chr2 (97-175)||(17893953-17894031)
chr2 (97-175)||(43323718-43323796)


Alignment Details
Target: chr7 (Bit Score: 877; Significance: 0; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 877; E-Value: 0
Query Start/End: Original strand, 22 - 970
Target Start/End: Original strand, 24907076 - 24908020
Alignment:
Q  22 aagggcaaggttaaacgtcccatttataatctagagtcgcatgtaacgacgtttctaatataagaagaagaaaaattgtttggtagatggattagatgga 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907076 aagggcaaggttaaacgtcccatttataatctagagttgcatgtaacgacgtttctaatataagaagaagaaaaattgtttggtagatggattagatgga 24907175  T
Q  122 ttttgtactggagggattggatgattatggatttggtggatcacattgccacccttctgtaacgttactttcattttatacctcggttggttatttgaat 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24907176 ttttgtactggagggattggatgattatggatttggtggatcacattgccacccttatgtaacgttactttcattttatacctcggttggttatttgaat 24907275  T
Q  222 ttccacattttccttgagctcattgttattacgtattt--gatatcttccttgataagtaataatttattataatttgttactgcatcttttagtatgtc 319  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24907276 ttccacattttccttgagctcattgttattacgtctttttgatatcttccttgataagtaataatttattataatgtgttactgcatcttttagtatgtc 24907375  T
Q  320 tcgaatggcattgtaattttcaaaacagtagcaagaaatcacattgtcgtgaaagctaggaaagcaagcttttcaatttttacgaaagttgctctttgaa 419  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907376 tcgaatggcgttgtaattttcaaaacagttgcaagaaatcacattgtcgtgaaagctaggaaagcaagcttttcaatttttacgaaagttgctctttgaa 24907475  T
Q  420 acgtgggtttagctttcccgccgccaaaccaaacaggtcctttaactgttagctctttgaaacatgggtttggctctttgaaacgtgttattgctgatca 519  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907476 acgtgggtttagctttcccgccgccaaaccaaacaggtcctttcactgttagctctttgaaacatgggtttggctctttgaaacgtgttattgctgatca 24907575  T
Q  520 atgtttttatggaatgtggaaccaataagcaataacagaagtaaatatatgaacatttatttaatgcagtatccaacaacataagaaataagattcatca 619  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24907576 atgtttttatggaatgtggaaccaataagcaataacagaagtaaatatatgaacatttatttaatgcagtatccaacaatataagaaataagattcatca 24907675  T
Q  620 taatgaatttaacccatgattccctttggaaccacatgtatcctaacaactaaatgataaatacatcatataccagaaacatggaaccaacatcatttgt 719  Q
    ||||||||      |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24907676 taatgaat------catgattccctttggaaccacatgtatcctaataactaaacgataaatacatcatataccagaaacatggaaccaacatcatttgt 24907769  T
Q  720 aaatagtaaccatcatctaggaaacatctctgtcacaatatctgtaccgctaaattgcgtagaggtttgacatcgattttcatattttttgtgcttgatt 819  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907770 aaatagtaaccatcatctaggaaacatctctgtcacaatatctgtaccgctaaattgcgtagaggtttgacatcgattttcatattttttgtgcttgatt 24907869  T
Q  820 acttgagatgacgatgaaatctcattcaaagaaccactcgtctttgcggaagcattccatctgtatattccaggctcagtcaatgccttctcattaagat 919  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907870 acttgagatgacgatgaaatctcattcaaagaaccactcgtctttgcggaagcattccatctgtatattccaggctcagtcaatgccttctcattaagat 24907969  T
Q  920 gaacttgtctggaaagcatttgtagaacttgtttcatggttggtctgtgct 970  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24907970 gaacttgtctggaaagcatttgtagaacttgtttcatggttggtctgtgct 24908020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 514 - 956
Target Start/End: Original strand, 24889863 - 24890303
Alignment:
Q  514 tgatcaatgtttttatggaatgtggaaccaataagcaataacagaagtaaatatatgaacatttatttaatgcagtatccaacaacataagaaataagat 613  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||||||||||||||||||    
T  24889863 tgatcaatttttgtatggaaagtggaaccaataagcaataacagaagtaaatatatgaacatttattcaatgtagtaccccacaacataagaaataagat 24889962  T
Q  614 tcatcataatgaatttaacccatgattccctttggaaccacatgtatcctaacaactaaat-gataaatacatcatataccagaaacatggaaccaacat 712  Q
    ||||||||||  ||||| ||||| |||||||||||||||||||||||||||||||| |||  ||||||||||||| |||||| ||  ||| | |||||||    
T  24889963 tcatcataatatattta-cccattattccctttggaaccacatgtatcctaacaacaaaaaagataaatacatcacataccaaaagtatgaacccaacat 24890061  T
Q  713 catttgtaaatagtaaccatcatctaggaaacatctctgtcacaatatctgtaccgctaaattgcgtagaggtttgacatcgattttcatattttttgtg 812  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  24890062 catttgcaaatagtaaccatcatctaggaaacatctctgtcacaatatctgtaccgctaaattgcgtagaggtttgatgtcgattttcatattttttgtg 24890161  T
Q  813 cttgattacttgagatgacgatgaaatctcattcaaagaaccactcgtctttgcggaagcattccatctgtatattccaggctcagtcaatgccttctca 912  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||     
T  24890162 cttgattacttgagatgacgatgacatctcattcaaagaaccactcgtctttgcggaggcattctatttgtatattccatgctcagtcaatgccttctcc 24890261  T
Q  913 ttaagatgaacttgtctggaaagcatttgtagaacttgtttcat 956  Q
     ||  |||||||||| ||||||||||||||||||| ||||||||    
T  24890262 ata--atgaacttgtttggaaagcatttgtagaacatgtttcat 24890303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 313 - 455
Target Start/End: Complemental strand, 2212799 - 2212658
Alignment:
Q  313 gtatgtctcgaatggcattgtaattttcaaaacagtagcaagaaatcacattgtcgtgaaagctaggaaagcaagcttttcaatttttacgaaagttgct 412  Q
    |||||| | ||||||| ||||| |||||||||  || |||||||||||  ||| |||||||||||||||||| ||||| |||||||  |||||||||||     
T  2212799 gtatgtttagaatggcgttgta-ttttcaaaattgtggcaagaaatcatgttgccgtgaaagctaggaaagctagcttctcaatttccacgaaagttgcc 2212701  T
Q  413 ctttgaaacgtgggtttagctttcccgccgccaaaccaaacag 455  Q
    ||| || |||||||||| |||||||| ||||||||||||||||    
T  2212700 cttcgagacgtgggtttggctttcccaccgccaaaccaaacag 2212658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 18264575 - 18264650
Alignment:
Q  97 ttgtttggtagatggattagatggattttgtactggagggattggatgattatggatttggtggatcacattgcca 172  Q
    ||||||| | |||||||| ||||||||||||| |||| ||||||||||  ||||||| |  ||||||| |||||||    
T  18264575 ttgtttgatggatggattggatggattttgtagtggatggattggatggatatggatctcatggatcatattgcca 18264650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 23869296 - 23869369
Alignment:
Q  92 aaaaattgtttggtagatggattagatggattttgtactggagggattggatgattatggatttggtggatcac 165  Q
    |||||||||||||| |||||||  ||| ||||||||| ||||   || ||||||| |||||||| |||||||||    
T  23869296 aaaaattgtttggtggatggatctgatagattttgtagtggattaatcggatgataatggatttagtggatcac 23869369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 2e-73; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 31302439 - 31302245
Alignment:
Q  22 aagggcaaggttaaacgtcccatttataatctagagtcgcatgtaacgacgtttctaatataagaagaagaaaaattgtttggtagatggattagatgga 121  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||  |||||  |||||||||||||||||||| ||||||||||    
T  31302439 aagggcaaggtgaaacgtcccatttataatctagagtcgcatgtaacgacatttctaata--agaag--gaaaaattgtttggtagatgaattagatgga 31302344  T
Q  122 ttttgtactggagggattggatgattatggatttggtggatcacattgccacccttctgtaacgttactttcattttatacctcggttggttatttgaa 220  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  31302343 ttttgtactcgagggattggatggatatggatttggtggatcacattgccacccttatgtaacgttactttaattttatacctcagttggttatttgaa 31302245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 350 - 457
Target Start/End: Original strand, 35154572 - 35154681
Alignment:
Q  350 gcaagaaatcacattgtcgtgaaagctaggaaagc--aagcttttcaatttttacgaaagttgctctttgaaacgtgggtttagctttcccgccgccaaa 447  Q
    |||||||||||  ||| ||||||||||||||||||  |||| | || ||||  |||||| ||||||||||||||||  |||| ||||| ||   ||||||    
T  35154572 gcaagaaatcatgttgccgtgaaagctaggaaagcaaaagcatctccatttccacgaaatttgctctttgaaacgtatgtttggcttttccattgccaaa 35154671  T
Q  448 ccaaacaggt 457  Q
    ||||||||||    
T  35154672 ccaaacaggt 35154681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 25245051 - 25244983
Alignment:
Q  107 gatggattagatggattttgtactggagggattggatgattatggatttggtggatcacattgccaccc 175  Q
    |||||||| ||||||||||||| |||| ||||||||||  ||||||| |  ||||||| ||||||||||    
T  25245051 gatggatttgatggattttgtagtggatggattggatggatatggatctcatggatcatattgccaccc 25244983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 25275167 - 25275089
Alignment:
Q  97 ttgtttggtagatggattagatggattttgtactggagggattggatgattatggatttggtggatcacattgccaccc 175  Q
    ||||||| | |||||||| ||||||||||||| |||| ||||||||||  |||| || |  ||||||| ||||||||||    
T  25275167 ttgtttgatggatggattggatggattttgtagtggatggattggatggatatgaatctcatggatcatattgccaccc 25275089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 8e-33; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 11026769 - 11026889
Alignment:
Q  336 ttttcaaaacagtagcaagaaatcacattgtcgtgaaagctaggaaagcaagcttttcaatttttacgaaagttgctctttgaaacgtgggtttagcttt 435  Q
    |||||||||| |  |||||||||||| ||||||||||||||||||||| |||||| |||||||  |||||||| |||||||||||||||||||| |||||    
T  11026769 ttttcaaaactgcggcaagaaatcacgttgtcgtgaaagctaggaaagaaagcttctcaatttccacgaaagtcgctctttgaaacgtgggtttggcttt 11026868  T
Q  436 cccgccgccaaaccaaacagg 456  Q
    ||| | |||||||||||||||    
T  11026869 cccactgccaaaccaaacagg 11026889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 304 - 457
Target Start/End: Complemental strand, 24403809 - 24403656
Alignment:
Q  304 catcttttagtatgtctcgaatggcattgtaattttcaaaacagtagcaagaaatcacattgtcgtgaaagctaggaaagcaagcttttcaatttttacg 403  Q
    |||||||  |||||| | ||||| |||| || |||||||||| |  |||| ||||||| |||||||||||| |||||||||||| |  |  |||| || |    
T  24403809 catctttacgtatgtttggaatgacattatatttttcaaaactgcggcaaaaaatcacgttgtcgtgaaagttaggaaagcaagttacttcatttctagg 24403710  T
Q  404 aaagttgctctttgaaacgtgggtttagctttcccgccgccaaaccaaacaggt 457  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||    
T  24403709 aaagttgctctttgaaatgtgggtttggctttcccaccgtcaaaccaaacaggt 24403656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 8933907 - 8933983
Alignment:
Q  97 ttgtttggtagatggattagatggattttgtactggagggattggatgattatggatttggtggatcacattgccac 173  Q
    ||||||| | |||||||| ||||||||||||| |||| ||||||||||| ||||||| |  ||||||| ||||||||    
T  8933907 ttgtttgatggatggattggatggattttgtagtggatggattggatgaatatggatctcatggatcatattgccac 8933983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 5708198 - 5708120
Alignment:
Q  97 ttgtttggtagatggattagatggattttgtactggagggattggatgattatggatttggtggatcacattgccaccc 175  Q
    ||||||| | |||||||| ||||||||||||| ||||  |||||||||  ||||||| |  ||||||| ||||||||||    
T  5708198 ttgtttgatggatggattggatggattttgtagtggatagattggatggatatggatctcatggatcatattgccaccc 5708120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 9272896 - 9272953
Alignment:
Q  107 gatggattagatggattttgtactggagggattggatgattatggatttggtggatca 164  Q
    |||||||| ||||||||||||| |||| ||||||||||  ||||||| || |||||||    
T  9272896 gatggattggatggattttgtagtggatggattggatggatatggatctgatggatca 9272953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 3e-23; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 350 - 454
Target Start/End: Original strand, 40350454 - 40350558
Alignment:
Q  350 gcaagaaatcacattgtcgtgaaagctaggaaagcaagcttttcaatttttacgaaagttgctctttgaaacgtgggtttagctttcccgccgccaaacc 449  Q
    |||| ||||||| |||||||||||| ||||||||| ||||| || |||| || |||| |||||||||||||||||||||| |||||||| | ||||||||    
T  40350454 gcaaaaaatcacgttgtcgtgaaagttaggaaagcgagcttctccatttctatgaaaattgctctttgaaacgtgggtttggctttcccactgccaaacc 40350553  T
Q  450 aaaca 454  Q
    |||||    
T  40350554 aaaca 40350558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 322 - 458
Target Start/End: Original strand, 6217640 - 6217776
Alignment:
Q  322 gaatggcattgtaattttcaaaacagtagcaagaaatcacattgtcgtgaaagctaggaaagcaagcttttcaatttttacgaaagttgctctttgaaac 421  Q
    |||| |||||||| |||||||||| |  |||||||| ||| ||  ||||||||||||||||  |||||| |  ||||| |||||||||||||||| | ||    
T  6217640 gaatagcattgtatttttcaaaactgcggcaagaaaccacgttaccgtgaaagctaggaaactaagcttcttcattttcacgaaagttgctctttaagac 6217739  T
Q  422 gtgggtttagctttcccgccgccaaaccaaacaggtc 458  Q
    |   |||| ||||| || ||||||||||||| |||||    
T  6217740 gatagtttggcttttccaccgccaaaccaaagaggtc 6217776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 41189669 - 41189587
Alignment:
Q  92 aaaaattgtttggtagatggattagatggattttgtactggagggattggatgattatggatttggtggatcacattgccacc 174  Q
    |||| ||||||| | |||||||| ||||||||||||| |||| ||||||||||  ||||||| |  ||||||| |||||||||    
T  41189669 aaaatttgtttgatggatggattggatggattttgtagtggatggattggatggatatggatctcatggatcatattgccacc 41189587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 1e-16; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 371 - 455
Target Start/End: Original strand, 14988302 - 14988387
Alignment:
Q  371 aaagctaggaaagcaagcttttcaatttttacgaaagttgctctttgaaacgtgggtttagctttcccgccgcc-aaaccaaacag 455  Q
    ||||||||||||| ||||||||  ||||| |||||||| |||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  14988302 aaagctaggaaagtaagcttttagattttcacgaaagtagctccttgaaacgtgggtttggctttcccaccgccaaaaccaaacag 14988387  T

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Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 9129510 - 9129568
Alignment:
Q  117 atggattttgtactggagggattggatgattatggatttggtggatcacattgccaccc 175  Q
    ||||||||||||  ||| ||| ||||||| ||||||||||||||||||| |||||||||    
T  9129510 atggattttgtagcggatggaatggatgaatatggatttggtggatcactttgccaccc 9129568  T

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Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 9137617 - 9137675
Alignment:
Q  117 atggattttgtactggagggattggatgattatggatttggtggatcacattgccaccc 175  Q
    ||||||||||||  ||| ||| ||||||| ||||||||||||||||||| |||||||||    
T  9137617 atggattttgtagcggatggaatggatgaatatggatttggtggatcactttgccaccc 9137675  T

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Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 34365493 - 34365439
Alignment:
Q  121 attttgtactggagggattggatgattatggatttggtggatcacattgccaccc 175  Q
    |||||||| || | |||||||||| |||| |||||||||||||| ||||||||||    
T  34365493 attttgtagtgaatggattggatggttatagatttggtggatcaaattgccaccc 34365439  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 26858044 - 26857966
Alignment:
Q  97 ttgtttggtagatggattagatggattttgtactggagggattggatgattatggatttggtggatcacattgccaccc 175  Q
    ||||||| |||||||||| ||||||||||||| |||| ||||||||||| ||||||| |  ||||||| ||||||||||    
T  26858044 ttgtttgatagatggattggatggattttgtagtggatggattggatgaatatggatctcatggatcatattgccaccc 26857966  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000006; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 385 - 454
Target Start/End: Original strand, 7561317 - 7561386
Alignment:
Q  385 aagcttttcaatttttacgaaagttgctctttgaaacgtgggtttagctttcccgccgccaaaccaaaca 454  Q
    ||||||||| ||||| |||||||| ||||||| | ||||| ||||||||||||||| | |||||||||||    
T  7561317 aagcttttctattttcacgaaagtagctcttttagacgtgagtttagctttcccgcggtcaaaccaaaca 7561386  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 371 - 458
Target Start/End: Complemental strand, 12768670 - 12768583
Alignment:
Q  371 aaagctaggaaagcaagcttttcaatttttacgaaagttgctctttgaaacgtgggtttagctttcccgccgccaaaccaaacaggtc 458  Q
    |||||||||||||||||||| || | ||  ||||||||||||| || || |  | |||  ||||||||||||||||||||||||||||    
T  12768670 aaagctaggaaagcaagcttctctacttccacgaaagttgctccttaaaccacgagttcggctttcccgccgccaaaccaaacaggtc 12768583  T

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Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 14385 - 14463
Alignment:
Q  97 ttgtttggtagatggattagatggattttgtactggagggattggatgattatggatttggtggatcacattgccaccc 175  Q
    ||||||| | |||||||| ||||||||||||| |||| ||||||||||  ||||||| |  ||||||| ||||||||||    
T  14385 ttgtttgatggatggattggatggattttgtagtggatggattggatggatatggatctcatggatcatattgccaccc 14463  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 17894031 - 17893953
Alignment:
Q  97 ttgtttggtagatggattagatggattttgtactggagggattggatgattatggatttggtggatcacattgccaccc 175  Q
    |||||||||||||||||| ||||||| || |  |||| ||||||||||  |||||||||| ||||||  ||||||||||    
T  17894031 ttgtttggtagatggattggatggatattatggtggatggattggatgtatatggatttgatggatcctattgccaccc 17893953  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 43323796 - 43323718
Alignment:
Q  97 ttgtttggtagatggattagatggattttgtactggagggattggatgattatggatttggtggatcacattgccaccc 175  Q
    ||||||| | |||||||| ||||||||||||| |||| ||||||||||  ||| ||| |  ||||||| ||||||||||    
T  43323796 ttgtttgatggatggattggatggattttgtagtggatggattggatggatatagatctcatggatcatattgccaccc 43323718  T

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