View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9317_low_17 (Length: 241)
Name: NF9317_low_17
Description: NF9317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9317_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32861330 - 32861559
Alignment:
| Q |
1 |
agttttaaagttattcttggggtgcaggaattatatcatgagt----cacttatactatcttcattccagtgttggtaagttcatgccattttattcata |
96 |
Q |
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| T |
32861330 |
agttttaaagttattcttggggtgcaggaattatatcatgagtaatacacttatactatcttcattccagtgttggtaagttcatgccattttattcata |
32861429 |
T |
|
| Q |
97 |
tctgtcttttatttattttgccaactactaagttttatactgaacttatataacatttgaagcatttacacacttcatacaccatgtacaagtttgtttg |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32861430 |
tctgtcttttatttattttgccaactactaagttttatactgaacttatataacatttgaagcatttacacacttcatacaccatgtacaagtttgtttg |
32861529 |
T |
|
| Q |
197 |
taccactaacgtcaacaagttccaccattg |
226 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
32861530 |
taccactaacgtcaacaagttccaccattg |
32861559 |
T |
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