View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9318_low_4 (Length: 348)
Name: NF9318_low_4
Description: NF9318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9318_low_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 18 - 340
Target Start/End: Original strand, 5289495 - 5289817
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289495 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
5289594 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289595 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatataccttttcacatatggacgaagacccaagagttttgtgagttgataatcggctccag |
5289694 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5289695 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctcctttcctag |
5289794 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
5289795 |
tctaggtacctctaccaccacca |
5289817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 5310721 - 5310399
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310721 |
agtatcactggggccacgaaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
5310622 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
5310621 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatataccttttcacatatggacgaaggcccaagagttttgtgagttgataatcagctccag |
5310522 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5310521 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctcctttcctag |
5310422 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
5310421 |
tctaggtacctctaccaccacca |
5310399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 5284632 - 5284310
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
|||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5284632 |
agtatcgctagggccacgaaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagctaaatctttggccaaacga |
5284533 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5284532 |
agtaccgtaccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagtttggtgagttgataatcggctccag |
5284433 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5284432 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttggccccattcttttatagccttcactgcagcctcctttcctag |
5284333 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
5284332 |
tctaggtacctctaccaccacca |
5284310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 5302820 - 5302498
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||| |
|
|
| T |
5302820 |
agtatcactagggccacgaaatgtgacagcggtgacctctgaacatacaaccaacacacgagcacctttgttgttctcagctagatctttggccaaacga |
5302721 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| | | |
|
|
| T |
5302720 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagtttggtgagttgataatcagcttcgg |
5302621 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5302620 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctcctttcctag |
5302521 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
5302520 |
tctaggtacctctaccaccacca |
5302498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 5315435 - 5315113
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5315435 |
agtatcactaggaccacgaaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttagccaaacgg |
5315336 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||| ||||||| |
|
|
| T |
5315335 |
agcaccgtgccacctgcaaagcacccttgttggtacatcatgtatcttttcacatatgggcgaagacctaatagtttggtgagttgataatctgctccag |
5315236 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
5315235 |
gcatgtcaacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctccttccctag |
5315136 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
5315135 |
tctaggtacctctaccaccacca |
5315113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 18 - 340
Target Start/End: Original strand, 46706786 - 46707108
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
||||||||| ||||| ||||||||||| || ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
46706786 |
agtatcactagggccgcggaatgtgactgcagtgacttcagaacaaacaaccaatacacgggcacctttgttgttctcagccaaatcgttagccaaacga |
46706885 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
||| ||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
46706886 |
agccccgtgcctcctgcaaagcaaccttgttggtacatcatataccttttcacatatgggcgaagaccgaagagttttgtgagttggtaatcagctccag |
46706985 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
46706986 |
gcatgtctacaccactagtagtgcaaacgattaagtgggtaatctttgactttggttgaccccattcttttatagccttcactgcagcctccttccctag |
46707085 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
46707086 |
tctaggtacctctaccaccacca |
46707108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 231
Target Start/End: Original strand, 32530819 - 32531019
Alignment:
| Q |
31 |
ccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacgaagcaccgtgccac |
130 |
Q |
| |
|
|||||||| || || || |||| ||||||||||||||| | || | ||| |||||| |||||||| | |||||| || || || || || ||||| | |
|
|
| T |
32530819 |
ccacggaaagtaactgcagtgatttcagaacaaacaacaagaactcttgcatttttgttattctcagcaagatctttcgctaagcggagaactgtgccgc |
32530918 |
T |
|
| Q |
131 |
ctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacacc |
230 |
Q |
| |
|
|||| ||||| |||||||| ||||||||| | ||| ||| |||| || || |||||||| |||||||| |||||||| || |||||||||||||| |
|
|
| T |
32530919 |
ctgcgaaacaaccttgttgatacatcatgagacgtttgacagatggttttaggcctaagagtttagtgagttggtaatcggcacccggcatgtctacacc |
32531018 |
T |
|
| Q |
231 |
a |
231 |
Q |
| |
|
| |
|
|
| T |
32531019 |
a |
32531019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 19 - 340
Target Start/End: Complemental strand, 1492491 - 1492170
Alignment:
| Q |
19 |
gtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacgaa |
118 |
Q |
| |
|
||||||||||| ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
1492491 |
gtatcactgggaccacgaaatgtgactgcagtgacttcagaacaaacaactaacacacgagcacctttgttgttctcagccaaatccttagccaaacgaa |
1492392 |
T |
|
| Q |
119 |
gcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccagg |
218 |
Q |
| |
|
| |||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||| |
|
|
| T |
1492391 |
gtaccgtgccacctgcaaaacaaccttgctggtacatcatgtatctttttacatatggacgaagacctaagagtttagtgagttgataatcggccccagg |
1492292 |
T |
|
| Q |
219 |
catgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagt |
318 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
1492291 |
catgtctacaccgcttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctccttccctagt |
1492192 |
T |
|
| Q |
319 |
ctaggtacctctaccaccacca |
340 |
Q |
| |
|
|||||||| ||||||||||||| |
|
|
| T |
1492191 |
ctaggtacttctaccaccacca |
1492170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 1505301 - 1504979
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
||||||||| ||||| || |||||||| || |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
1505301 |
agtatcactagggccgcgaaatgtgactgcagtgacttcggaacagacaaccaacacacgggcacctttgttgttctcagccaagtccttggccaaacga |
1505202 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
|||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||| ||||||| |
|
|
| T |
1505201 |
agcaccgtcccacctgcaaaacatccttgctggtacatcatgtacctcttcacatatgggcgaagacctaagagtttggtgagttggtaatcagctccag |
1505102 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
1505101 |
gcatgtctacaccacttgtggtgcaaacaattaagtgagtaatctttgactttggctgaccccattcttttatagcttttacggcagcctcctttcctag |
1505002 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
1505001 |
tctaggtacctctaccaccacca |
1504979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 1478323 - 1478001
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
||||||||| || ||||||||||| || || || ||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||| |
|
|
| T |
1478323 |
agtatcactaggaccacggaatgtcactgcagtaacttcagaacaaacaaccaacacacgagcacctttattgttctcagccaagtccttggccaaacga |
1478224 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||||||| ||||| || |||| |
|
|
| T |
1478223 |
agcaccgtcccacctgcaaaacatccttgttggtacatcatatacctcttcacatatggacgaagacctaagagtttggtgagttggtaatcagcgccag |
1478124 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1478123 |
gcatgtctacaccacttgtggtgcaaaagatcaagtgtgtaatctttgattttggttggccccattcttttatagctttcactgcagcctcctttcctag |
1478024 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||| ||||||||||||| |
|
|
| T |
1478023 |
tctaggtacttctaccaccacca |
1478001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 1482517 - 1482195
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
||||||||| || ||||||||||| || || || ||||||||||||||||||||||||||||||||||| || ||||||||||| || |||||||||||| |
|
|
| T |
1482517 |
agtatcactaggaccacggaatgtcactgcagtaacttcagaacaaacaaccaacacacgagcacctttattattctcagccaagtccttggccaaacga |
1482418 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
|||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||| |
|
|
| T |
1482417 |
agcaccgtcccacctgcaaagcatccttgttggtacatcatgtatctcttcacatatggacgaagacctaagagttttgtgagttggtaatcggcaccag |
1482318 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1482317 |
gcatgtctacaccacttgtggtacaaaatattaagtgtgtaatctttgattttggttggccccattcttttatagccttcactgcagcctcctttcctag |
1482218 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
|||||| |||||||||||||||| |
|
|
| T |
1482217 |
tctaggcacctctaccaccacca |
1482195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 1509448 - 1509126
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
|||||||| ||||||| |||||||| || |||||| ||||||||||||||||||||||||| ||| ||| || ||||||||||| || |||||| || |
|
|
| T |
1509448 |
agtatcaccagggccacaaaatgtgactgcaatgactttagaacaaacaaccaacacacgagcatcttggttattttcagccaaatcctttgccaaatga |
1509349 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| || ||||| || |||||||||| ||||||| |
|
|
| T |
1509348 |
agcacagtgccacctgcaaaacacctttgttggtacatcatgtacctttttacatatgggtgaagacctaaaagtttggtaagttgataatgagctccag |
1509249 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
||| || ||||||||||||||||||| |||||| || ||||||||||| ||||| || ||||||||||||||||| ||||||||| |||| |||||||| |
|
|
| T |
1509248 |
acatatcaacaccacttgtggtgcaaaagattaaatgtgtaatctttgattttggctggccccattcttttatagccttcactgcaacctcttttcctag |
1509149 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
|||||||||| ||| ||||||| |
|
|
| T |
1509148 |
cctaggtacctttacaaccacca |
1509126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 49 - 333
Target Start/End: Complemental strand, 1499533 - 1499249
Alignment:
| Q |
49 |
gtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacgaagcaccgtgccacctgcaaaacacccttgtt |
148 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |||||||| || || || ||||||||||| || || ||||||||| |||||||| ||| |
|
|
| T |
1499533 |
gtgatttcagaacaaacaaccaacacacgagcacctttgttattctcagctaagtccttcgccaaacgaagtactgttccacctgcataacaccctagtt |
1499434 |
T |
|
| Q |
149 |
ggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgat |
248 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| || |||||||||||||||||||| |||||||| || |
|
|
| T |
1499433 |
ggtacatcatgtaccttttcacatatgggttaagacctaagagttttgttagttggtaatccgcaccaggcatgtctacaccactataggtgcaaaaaat |
1499334 |
T |
|
| Q |
249 |
taagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctacc |
333 |
Q |
| |
|
||| || ||||| |||||||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
1499333 |
taaatgtgtaatatttgacttcggttgaccccattcttcgatagccttcactgcagcctccttccctagtctaggtatctctacc |
1499249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 49 - 340
Target Start/End: Complemental strand, 1486963 - 1486672
Alignment:
| Q |
49 |
gtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacgaagcaccgtgccacctgcaaaacacccttgtt |
148 |
Q |
| |
|
|||||||||||||| | ||||||||| ||||| |||| |||||||||||||| || |||||| |||| || || ||||| |||||||| || ||||||| |
|
|
| T |
1486963 |
gtgacttcagaacatattaccaacacaagagcatctttattgttctcagccaagtccttggcctaacgtagaacagtgccccctgcaaagcatccttgtt |
1486864 |
T |
|
| Q |
149 |
ggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgat |
248 |
Q |
| |
|
|||| ||||| |||| |||||||| |||| |||||| ||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||| || |
|
|
| T |
1486863 |
ggtatatcatataccgtttcacatccgggcaaagacctaagagttttgtgagttggtaatcggcaccaggcatgcctataccactcatggtgcaaaatat |
1486764 |
T |
|
| Q |
249 |
taagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
340 |
Q |
| |
|
|||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||| || ||| |||||||| |
|
|
| T |
1486763 |
taagtgtgtaatctttgactttggttggccctattcttttatagctttcactgcagcctcatttcctagcctaggcacgtctcgcaccacca |
1486672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 44128898 - 44128576
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
||||||||| ||||| || |||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
44128898 |
agtatcactagggccgcgaaatgtgactgcagtgacttcagaacagacaaccaacacacgagcacctttgttgttttcagctaaatctttagccaaacga |
44128799 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
|| |||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
44128798 |
aggaccgtgcctcctgcaaagcaaccttgttggtacatcatataccttttcacatatgggcgaagacctaagagttttgtgagttggtaatcagctccag |
44128699 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
44128698 |
gcatgtctacaccacttgtggtgcaaacgatcaagtgagtaatctttgactttggttgaccccattcttttatggccttcactgcagcctccttccctag |
44128599 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
44128598 |
tctaggtacctctaccaccacca |
44128576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 44133103 - 44132781
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
||||||||| ||||| || |||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
44133103 |
agtatcactagggccgcgaaatgtgactgcagtgacttcagaacagacaaccaacacacgagcacctttgttgttttcagctaaatctttagccaaacga |
44133004 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
|| |||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
44133003 |
aggaccgtgcctcctgcaaagcaaccttgttggtacatcatataccttttcacatatgggcgaagacctaagagttttgtgagttggtaatcagctccag |
44132904 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
44132903 |
gcatgtctacaccacttgtggtgcaaacgatcaagtgagtaatctttgactttggttgaccccattcttttatggccttcactgcagcctccttccctag |
44132804 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
44132803 |
tctaggtacctctaccaccacca |
44132781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 18 - 340
Target Start/End: Complemental strand, 44141525 - 44141203
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
||||||||| ||||| || |||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
44141525 |
agtatcactagggccgcgaaatgtgactgcagtgacttcagaacagacaaccaacacacgagcacctttgttgttttcagctaaatctttagccaaacga |
44141426 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
|| |||||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
44141425 |
aggaccgtgcctcctgcaaagcaaccttgttggtacatcatataccttttcacatatgggcgaagacctaagagttttgtgagttggtaatcagctccag |
44141326 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
44141325 |
gcatgtctacaccacttgtggtgcaaacgatcaagtgagtaatctttgactttggttgaccccattcttttatggccttcactgcagcctccttccctag |
44141226 |
T |
|
| Q |
318 |
tctaggtacctctaccaccacca |
340 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
44141225 |
tctaggtacctctaccaccacca |
44141203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 37 - 340
Target Start/End: Original strand, 24163607 - 24163910
Alignment:
| Q |
37 |
aatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacgaagcaccgtgccacctgcaa |
136 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| ||||| |||||||||||||||| |
|
|
| T |
24163607 |
aatgtgattgcggtaacttcagaacaaacaaccaacacacgagaacctttgttgttctcagccaagtccttggccaagcgaagtaccgtgccacctgcaa |
24163706 |
T |
|
| Q |
137 |
aacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgt |
236 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||| | |
|
|
| T |
24163707 |
aacacccttgttggtacatcatatacctttttacacatgggcgaagacctaagagttttgtgagttggtaatcggcaccaggcatatctacaccacttat |
24163806 |
T |
|
| Q |
237 |
ggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccacc |
336 |
Q |
| |
|
||||||| |||||||| || ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||| ||| |
|
|
| T |
24163807 |
agtgcaaaatattaagtgtgtgatctttgactttggttggccccattcttttatagccttcacggctgcctcctttcctagtcttggtgcctctactacc |
24163906 |
T |
|
| Q |
337 |
acca |
340 |
Q |
| |
|
|||| |
|
|
| T |
24163907 |
acca |
24163910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 132; Significance: 2e-68; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 317
Target Start/End: Original strand, 37863188 - 37863487
Alignment:
| Q |
18 |
agtatcactggggccacggaatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacga |
117 |
Q |
| |
|
||||||||| || |||||||| || || || |||| || |||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
37863188 |
agtatcactaggtccacggaaagtaactgcagtgatctccgaacaaaccaccaaaacacgagcgcctttgttgttttcagccaaatctttagccaaacga |
37863287 |
T |
|
| Q |
118 |
agcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccag |
217 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||| |||||||| || | |||||||| ||||||||||||||||| |||||||| ||||| || || |||| |
|
|
| T |
37863288 |
agcaccgtcccaccagcaaaacaaccttgttgatacatcatataacgcttcacatacgggcgaagacccaagagctttgtgagctgatagtcagcaccag |
37863387 |
T |
|
| Q |
218 |
gcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
317 |
Q |
| |
|
|||| || ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| || ||||| || ||||||||| |||||||| |
|
|
| T |
37863388 |
gcatatccacaccacttgtggtgcaaaaaattagatgagtaatctttgacttaggttgaccccattccttgatagcctttgttgcagcctcttttcctag |
37863487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 58 - 340
Target Start/End: Original strand, 37859202 - 37859484
Alignment:
| Q |
58 |
gaacaaacaaccaacacacgagcacctttgttgttctcagccaaatctttggccaaacgaagcaccgtgccacctgcaaaacacccttgttggtacatca |
157 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
37859202 |
gaacaaactaccaacacacgagcacctttgttgttttcagccaagtctttagccaaacgaagcaccgtgccaccagcaaaacaaccttgttggtacatca |
37859301 |
T |
|
| Q |
158 |
tgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaagtgagt |
257 |
Q |
| |
|
|||| | ||||||||||| ||||| |||||||| ||||| || ||||| ||||| || |||||||| || ||||| |||||||||| ||| | ||| || |
|
|
| T |
37859302 |
tgtaacgcttcacatatggacgaaggcccaagagctttgtcagctgatagtcggcaccgggcatgtccacgccactggtggtgcaaaagatgaggtgggt |
37859401 |
T |
|
| Q |
258 |
aatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
340 |
Q |
| |
|
|||||| ||||| |||||||||||||| || || || || ||| ||||| ||||||||||| |||||||| || ||||||| |
|
|
| T |
37859402 |
aatcttggacttaggttgaccccattccttgatggcctttgttgctgcctcttttcctagtcttggtacctccacaaccacca |
37859484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 293
Target Start/End: Complemental strand, 39030344 - 39030120
Alignment:
| Q |
69 |
caacacacgagcacctttgttgttctcagccaaatctttggccaaacgaagcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttc |
168 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| ||||| ||||| || | |||| |||||||| ||||||||||||||||| || | || |
|
|
| T |
39030344 |
caacacacgggcacctttgttgttctcagccaaatctttagccaagcgaagagccatcgcaccagcaaaacaaccttgttggtacatcatataacgcttt |
39030245 |
T |
|
| Q |
169 |
acatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgact |
268 |
Q |
| |
|
|||||||| | ||| || ||||| |||||||| ||||| || ||||||||||| || |||||||||| ||||||| || | ||||||| | |||||| |
|
|
| T |
39030244 |
acatatggacaaaggcctaagagctttgtgagctgatagtcagctccaggcatatcgacaccacttgaagtgcaaaatatgagatgagtaaccattgact |
39030145 |
T |
|
| Q |
269 |
ttggttgaccccattcttttatagc |
293 |
Q |
| |
|
| |||||||||||||| || ||||| |
|
|
| T |
39030144 |
taggttgaccccattcattgatagc |
39030120 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 73 - 284
Target Start/End: Complemental strand, 35251080 - 35250869
Alignment:
| Q |
73 |
acacgagcacctttgttgttctcagccaaatctttggccaaacgaagcaccgtgccacctgcaaaacacccttgttggtacatcatgtaccttttcacat |
172 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||||||||||| ||| | ||||| || ||||||||||||||||||||||| || | |||||| |
|
|
| T |
35251080 |
acacgagcacctttattgttctcagccaaatctttagccaaacgaagaaccataccaccagcgaaacacccttgttggtacatcatataacgtttcaccg |
35250981 |
T |
|
| Q |
173 |
atgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttgg |
272 |
Q |
| |
|
| || ||||| || | | ||||||||| |||||||| || |||||||| || |||||||| || |||||| || | |||||| ||||| |||||||| |
|
|
| T |
35250980 |
acggacgaagtcctagcaattttgtgagctgataatcagcaccaggcatatccacaccactagtaatgcaaaatatgaggtgagtgatcttggactttgg |
35250881 |
T |
|
| Q |
273 |
ttgaccccattc |
284 |
Q |
| |
|
|||||||||||| |
|
|
| T |
35250880 |
ttgaccccattc |
35250869 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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