View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9319_low_45 (Length: 272)
Name: NF9319_low_45
Description: NF9319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9319_low_45 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 33495040 - 33495281
Alignment:
| Q |
19 |
tgcaactatttttcattcatttccaatcaaataattgannnnnnnnnaacaatctaagataaaattttgaaacttgtattattaattttgatacaaaaaa |
118 |
Q |
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| T |
33495040 |
tgcaactatttttcattcatttccaatcaaataattgattttttt--aacaatcaaagataaaattttgaaacttgtattattaattttgatacaaaaaa |
33495137 |
T |
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| Q |
119 |
gcggatagacattcatgttagtaacgaa-ttatatatagtaatcacgtaaaattctgataaaagggtcataaagcaaaacaaaattttaattacctctca |
217 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33495138 |
gcggatagacattcatgttagtaacgaaattatatatagtaatcacgtaaaattctgataaaagggtcataaagcaaaacaaaattttaattacctctca |
33495237 |
T |
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| Q |
218 |
acatgatgaagcagtgaaattaagatctaatcactgtctctgct |
261 |
Q |
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| T |
33495238 |
acatgatgaagcagtgaaattaagatctaatcactgtcactgct |
33495281 |
T |
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