View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9319_low_51 (Length: 258)
Name: NF9319_low_51
Description: NF9319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9319_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 35073502 - 35073743
Alignment:
| Q |
1 |
tgcacccgagtatgcaggtatacaaagcttttggttttaagcgcgtgccttaattaattttaaaattgtatctagtacattattttgtgattatagctat |
100 |
Q |
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| T |
35073502 |
tgcacccgagtatgcaggtataaaaaacttttggttttaagcgcgtgccttaattaattttaaaattgtatctagtacattattttgtgattatagctat |
35073601 |
T |
|
| Q |
101 |
agcctataggtactgcatcaatatcatgctctaatgtcgcgaatattttggtagtttgattgagtagctacacaaaaacaaaagttggaaggagnnnnnn |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35073602 |
agcctataggtactgcatcaatatcatgctctaatgtcgcgaatattttggtagtttgattgagtagctacacaaaaacaaaagttggaaggagaaaaaa |
35073701 |
T |
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| Q |
201 |
ntgttatttgatacctgatatgtgtttctgaaactctctgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
35073702 |
atgttatttgatacctgatatgtgtttctgaaactctttgct |
35073743 |
T |
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