View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9319_low_73 (Length: 240)
Name: NF9319_low_73
Description: NF9319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9319_low_73 |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 32387034 - 32386810
Alignment:
| Q |
1 |
ctttgatttttattcttattgcatggtagttgatgtataaatcaaccctttcctataatgtgtactatgattttacccacagtatatatgtactcatgag |
100 |
Q |
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| T |
32387034 |
ctttgatttttattcttattgcatggtagctgatgtataaatcaaccctttcctataatgtgtactatgattttacccacaatatatatgtactcatgag |
32386935 |
T |
|
| Q |
101 |
aaacatatcaatgtaaaattggatctccttccaattattctttctctctttcatttatgtgatgaaaatttattaattattttaagagctaaacttccat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32386934 |
aaacatatcaatgtaaaattggatctccttccaattattctttctctctttcatttatgtgatgaaaatttattaattattttaagagctaaacttccat |
32386835 |
T |
|
| Q |
201 |
ttcctctaattcttaagatgaaatt |
225 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
32386834 |
ttcctctaattcttaagatgaaatt |
32386810 |
T |
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