View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9319_low_9 (Length: 433)
Name: NF9319_low_9
Description: NF9319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9319_low_9 |
 |  |
|
| [»] scaffold0291 (1 HSPs) |
 |  |  |
|
| [»] scaffold0002 (4 HSPs) |
 |  |  |
|
| [»] scaffold0022 (1 HSPs) |
 |  |  |
|
| [»] scaffold0061 (1 HSPs) |
 |  |  |
|
| [»] scaffold0017 (1 HSPs) |
 |  |  |
|
| [»] scaffold0318 (1 HSPs) |
 |  |  |
|
| [»] scaffold0008 (1 HSPs) |
 |  |  |
|
| [»] scaffold0009 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 54)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 18797384 - 18797612
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
18797384 |
ccactgtttgtacaatgacatcaaaagttcaatcctcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcctaccttgtt |
18797483 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18797484 |
ataagtgtaacacctcacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
18797583 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
18797584 |
aagtccaagatgttgcaagcattactaga |
18797612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 38258607 - 38258816
Alignment:
| Q |
6 |
gtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
38258607 |
gtttgtacaatgacatcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcctaccttgttataag |
38258706 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
38258707 |
cgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactttgtttgcatgttaaagattccaacgataaaatagtacctgtaagtc |
38258806 |
T |
 |
| Q |
206 |
caaaatgttg |
215 |
Q |
| |
|
||| |||||| |
|
|
| T |
38258807 |
caagatgttg |
38258816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 7334851 - 7335078
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
7334851 |
ccactgtttgtacaatgacatcaaaagttcagttctcatagtatcatcaactcatcagcttaacaagactacacttaatctaattttatcctaccttgtt |
7334950 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||||| ||||| |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7334951 |
ataagtgtaacaccccacagagtgtaacacttaagattatcagataatatcatcaact-agtttgaatgttaaagattccgacaataaaatagtacctgt |
7335049 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| ||||| |||||||||||||||||||| |
|
|
| T |
7335050 |
aaatccaagatgttgcaagcattactaga |
7335078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 30055584 - 30055812
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||||||||||| || |||||||||||||| |||||||||||||||||||||||| ||||||| | |
|
|
| T |
30055584 |
ccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcattaattcatcagattaacaagactacacttaatctaattttatcctaccttgct |
30055683 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| || |||||||||||||||| |
|
|
| T |
30055684 |
ataagcgtaacaccctacaaagtgtaacacttaagactatcacataatatcatcaacgttgttcgcatgttaaagattccaacgataaaatagtacctgt |
30055783 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
30055784 |
aagtccaagatgttgcaagcattactaga |
30055812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 10481662 - 10481890
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||| | | ||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
10481662 |
ccactgtttgtacaatgacatcaaaaattcagtctttatagtatcatcaattcatcagattaacaagactacgcttaatctaattttatcttaccttgtt |
10481761 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||| | || |
|
|
| T |
10481762 |
ataagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctctttgcatgtcaaagattccaacaataaaatagtatccgt |
10481861 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||| ||||||||| |
|
|
| T |
10481862 |
aagtccaagatgttgcaagtattactaga |
10481890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 27283801 - 27284029
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| ||||||||||||| |||||||||||| | |||||||||| ||||| | |||||||||||| ||||| |||||||||||||||||| ||||||||| |
|
|
| T |
27283801 |
ccaccgtttgtacaatgaaatcaaaagttcagtcctcatagtattatcaatttatcagattaacaagactatacttaatctaattttatcctaccttgtt |
27283900 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||| ||||||||||||||| || |||| ||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
27283901 |
ataagtgtaacaccccacaaagtgtaacacttaaaactatcacataatattatcaactatgtttgcatgttaaagattccaacgataaaatagtacctgt |
27284000 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
27284001 |
aagtccaagatgttgcaagcattactaga |
27284029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 37109929 - 37110159
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatctta--ccttg |
98 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | | ||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| || ||||| |
|
|
| T |
37109929 |
ccaccgtttgtacaatgacatcaaaagttcagtcattataatatcatcaattcatcagattaacaagactacacttaatataattttatcctataccttg |
37110028 |
T |
 |
| Q |
99 |
ttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacct |
198 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| | || |||||||||||| | |
|
|
| T |
37110029 |
ttataagcgtaacaccccacaaagtgtaacacttaagactaccacataatatcatcaactctgtttgcatgttaaagatttcaacgataaaatagtacat |
37110128 |
T |
 |
| Q |
199 |
gtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |
|
|
| T |
37110129 |
gtaagtccaagatgttgcaagcattactaga |
37110159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 9355930 - 9355702
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||| | |||||||| |||| | || |||||||||||||| |||||||||||||||||||| ||| ||||||||| |
|
|
| T |
9355930 |
ccactgtttgtacagtgacatcaaaagtttagttctcatattatcgttaattcatcagattaacaagactacacttaatctaatttcatcctaccttgtt |
9355831 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
9355830 |
ttaagtgtaacaccccacaaagtgtaacacttaaaactatcacataatatcatcaactatgtttgcatgttaaagatgccaacgataaaatagtacttgt |
9355731 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
9355730 |
aagtccaagatgttgcaagcattactaga |
9355702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 32821157 - 32820929
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | ||| |||||||||||| |||| ||||||||| ||||||| ||||| || ||||||| ||||||||| |
|
|
| T |
32821157 |
ccactgtttgtacaatggcatcaaaagttcagtcctcgtagtatcatcaattcattagattaacaagactacagttaatttagttttatcctaccttgtt |
32821058 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||| ||| |
|
|
| T |
32821057 |
ttaagcgtaacaccccataaagtgtaacacttaagactatcgcataatatcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgt |
32820958 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
32820957 |
aagtctaagatgttgcaagcattactaga |
32820929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 31579158 - 31578940
Alignment:
| Q |
11 |
tacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaa |
110 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
31579158 |
tacaatgacatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttataagtataa |
31579059 |
T |
 |
| Q |
111 |
cacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaa |
210 |
Q |
| |
|
|||| | ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| || |||||||| ||| ||||||||||| | |
|
|
| T |
31579058 |
caccctataaagtgtaacacttaagactatcacataatatcatcaactttatttgcatgttaaagattccaacgataaaataatacatgtaagtccaaga |
31578959 |
T |
 |
| Q |
211 |
tgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
31578958 |
tgttgcaagcattactaga |
31578940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 21991693 - 21991913
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||| | | |||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
21991693 |
ccactgtttgtacagtgtcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgtt |
21991792 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| | || |||||||||||||||| |
|
|
| T |
21991793 |
ttaagtgtaacaccccacaaagtgtaacacttaagactatcacatgatatcagcaactttgtttgcatgttaaagatgtcaacgataaaatagtacctgt |
21991892 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagca |
221 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
21991893 |
aagtccaagatgttgcaagca |
21991913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 17842690 - 17842460
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatctta--ccttg |
98 |
Q |
| |
|
|||| |||||||||||||||||||||| ||| | | ||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| || ||||| |
|
|
| T |
17842690 |
ccaccgtttgtacaatgacatcaaaagctcagtcattataatatcatcaattcatcagattaacaagactacacttaatataattttatcctataccttg |
17842591 |
T |
 |
| Q |
99 |
ttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacct |
198 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| | || |||||||||||| | |
|
|
| T |
17842590 |
ttataagcgtaacatcccacaaagtgtaacacttaagactaccacataatatcatcaactctgtttgcatgttaaagatttcaacgataaaatagtacat |
17842491 |
T |
 |
| Q |
199 |
gtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||| ||||||||||||||| |||| |
|
|
| T |
17842490 |
gtaagtccaagatgttgcaagcattattaga |
17842460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 11071263 - 11071488
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| |
|
|
| T |
11071263 |
ccactgtttgtacagtgacatcaaaagttcagttctcatagtatcatcaattcatcagattaacaacactacgcttaatctaattttatcctaccttgtt |
11071362 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||| ||| ||||||||||||||||||||| |||||||||||||||| |||| |||| |||||||||||| | || |||||||| ||||||| |
|
|
| T |
11071363 |
ttaagtgtaataccccacaaagtgtaacacttaagattatcacataatatcatcaactttgttcgcatgttaaaga---caacgataaaataatacctgt |
11071459 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||| |||||||||| |
|
|
| T |
11071460 |
aagtccaagatgttgcaaacattactaga |
11071488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 24211800 - 24212026
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||| || |||| ||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||| ||||||||| | |
|
|
| T |
24211800 |
actgtttatagaatggcatcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatcataccttgttct |
24211899 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| |||||| | |||||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||||||| || |||||||||||||| ||| |
|
|
| T |
24211900 |
aagtgtaacatcctacaaagtgtaacacctaagactatcacataatatcatcaactttatttgcatgttaaagattccaacgataaaatagtacctataa |
24211999 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
24212000 |
gtccaagatgttgcaagcattactaga |
24212026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 23111247 - 23111477
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatct--taccttg |
98 |
Q |
| |
|
||||| ||||||||||| |||||||||||||| || |||||||||||| |||| ||||||||| ||||||||||||||||||||||| | ||| ||| |
|
|
| T |
23111247 |
ccactatttgtacaatggcatcaaaagttcaaccatcgtagtatcatcaattcattagattaacaagactacacttaatctaattttatatcatactttg |
23111346 |
T |
 |
| Q |
99 |
ttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacct |
198 |
Q |
| |
|
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||| | |
|
|
| T |
23111347 |
ttttaagcgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagataacaacgataaaatagtacat |
23111446 |
T |
 |
| Q |
199 |
gtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| || || |||||| ||||||||||||| |
|
|
| T |
23111447 |
gtaaatcaaagatgttgaaagcattactaga |
23111477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 41765182 - 41764957
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||| || |||||||||| || | |||||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||||| |
|
|
| T |
41765182 |
ccactgtttgtacggtggcatcaaaagtccagtcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttactctaccttgtt |
41765083 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| || ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| || || || ||||||||| ||| |
|
|
| T |
41765082 |
ttaagtgtaacaccccagaaagtgtaacacttaagactatcacataatatcatcaactatgtttgcatgttaaagatgccaacgatgaaatagtacatgt |
41764983 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||||||| || |||||||||||||| |
|
|
| T |
41764982 |
aagtccaagattttgcaagcattact |
41764957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 15612859 - 15612635
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||| | || ||||||||||||| | | ||| ||||||||| |||||||||||||| || |||||||||| |||||||||| ||||||||| ||| |
|
|
| T |
15612859 |
tgtttgtagagtggcatcaaaagttcagtccctataatatcatcaattcatcagattaacaagaatacacttaatttaattttatcctaccttgttttaa |
15612760 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || | |||||||||||||||||||| |
|
|
| T |
15612759 |
gtgtaacaccccacaaagtgtaacacttaagactatcacatgatatcagcaactctgtttgcatgttaaagatgccaatgataaaatagtacctgtaagt |
15612660 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
| || |||||||||||||||||||| |
|
|
| T |
15612659 |
ctaagatgttgcaagcattactaga |
15612635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 32432513 - 32432737
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||| |||||||| ||||| || |||| ||||| |||||||||| |||||| || ||| |
|
|
| T |
32432513 |
tgtttgtacaatgacatcaaaagttcagtctccatagtatcatcaattcatcagactaacaagaatacagttaatataattttatcctaccttattttaa |
32432612 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||||||| |||||| ||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| || || |||||||||||| ||||||| |
|
|
| T |
32432613 |
gtgtaacaccccacaaaatgtaacacttaagactatcacataatatcatcaacactgtttgcatattaaagatgccaacgataaaatagtacatgtaagt |
32432712 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||||||||||||||||||| |
|
|
| T |
32432713 |
ccaaggtgttgcaagcattactaga |
32432737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 37 - 229
Target Start/End: Complemental strand, 15672830 - 15672635
Alignment:
| Q |
37 |
catagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaaga |
136 |
Q |
| |
|
|||||||||||||| |||||||| ||||| || ||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||| |
|
|
| T |
15672830 |
catagtatcatcaattcatcagactaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaacactccacaaagtgtaacacttaaga |
15672731 |
T |
 |
| Q |
137 |
ctatcacataatatcataaactctgtttgcatgttaaagattccgacaataa---aatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||| |||||| |||| ||||||||||| || || |||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15672730 |
ctatcacataatatcatcaactctatttgaatgttaaagatgccaacgataaaataatagtacctgtaagtccaaaatgttgcaagcattactaga |
15672635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 37347083 - 37347303
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| |||||||||||||||| | |||||||||||||||| | || | ||||||| |||||||||||||||||||||||| ||| ||||| ||| |
|
|
| T |
37347083 |
tgtttgtacagtgacatcaaaagttcagtcctcatagtatcatcaatttattaaattaacaggactacacttaatctaattttatcatacattgttttaa |
37347182 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||| || |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || | ||||||||||| |||||||| |
|
|
| T |
37347183 |
gtgtaa-actccacaaagtgtaacacttaagactaccacataatatcatcaactctgtttgcatgttaaagatgccaatgataaaatagtatctgtaagt |
37347281 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||| || |||||||||||||| |
|
|
| T |
37347282 |
ccaagatattgcaagcattact |
37347303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 251 - 433
Target Start/End: Original strand, 33380579 - 33380753
Alignment:
| Q |
251 |
atttttaaaatgtaagggaaactaatacatttgatagcgttagaggatcgttgcatcatcattctagcgttgaagagatcaggtgctcgtatggatccat |
350 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
33380579 |
atttttaaaatgtaagggaaaataatgcatttgatag-gttagaggatcgttgcatcatcattctagcgttgaagagatg-------cgtatggatccat |
33380670 |
T |
 |
| Q |
351 |
attcccatcataatcttcctgattttaagttgttcaagctttgcgccgagatgagcacctcaaatttaatcattgttggacct |
433 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
33380671 |
attcccatcataatcttcctgattttaacttgctcaagctttgtgccgagacgagcacctcaaatttaatcattgttggacct |
33380753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 10359308 - 10359092
Alignment:
| Q |
11 |
tacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaa-tctaattttatcttaccttgttataagcgta |
109 |
Q |
| |
|
|||| |||||||||||||||| | || ||||||||||||| ||||||||| |||| |||||||||||| |||||||||||| ||||||||| |||| ||| |
|
|
| T |
10359308 |
tacagtgacatcaaaagttcagt-ctgatagtatcatcaattcatcagatcaacaagactacacttaaatctaattttatcataccttgttttaagtgta |
10359210 |
T |
 |
| Q |
110 |
acacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaa |
209 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| | || ||||| |||||| ||||||||||| |
|
|
| T |
10359209 |
acaccccacaaagtgtaacacttaagactatcacataacaacatcaactctgtttgcatgttaaagatgtcaacgataaattagtacttgtaagtccaag |
10359110 |
T |
 |
| Q |
210 |
atgttgcaagcattacta |
227 |
Q |
| |
|
|| ||||||||||||||| |
|
|
| T |
10359109 |
attttgcaagcattacta |
10359092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 43686097 - 43686322
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | | ||||||||| ||| |||||||| ||||| || |||| |||||||||||||||| ||||||||| |
|
|
| T |
43686097 |
ccactgtttgtacaatggcatcaaaagttcagtccctatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcctaccttgtt |
43686196 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||| | || |||||||| || ||| |
|
|
| T |
43686197 |
ttaagtgtaacaccccacaaagtgtaacacttaaaactatcacataatatcatcaactatgtttgtatgttaaagatgtcaacgataaaataatatttgt |
43686296 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||||||| ||||||||||||||||| |
|
|
| T |
43686297 |
aagtccaagatgttgcaagcattact |
43686322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 5657585 - 5657357
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||| | ||||||||||||||| |||||| ||||||| | |||||||||| |||||||||| ||| ||||| |
|
|
| T |
5657585 |
ccactgtttgtacagtggcatcaaaagttcagtcttcatagtatcatcaattcatcatattaacaaaaatacacttaatttaattttatcctactttgtt |
5657486 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| | |||||||||||| ||||||||||||| ||| |||||| |||| |||||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
5657485 |
ttaagtgtaacagcccacaaagtgtaatacttaagactatcgcatgatatcagcaactatgtttgcatgttaaagatgccaacgataaaatagtacatgt |
5657386 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
5657385 |
aagtctaagatgttgcaagcattactaga |
5657357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 4582976 - 4583201
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||| | | |||||||||| ||| |||||||| ||||| || |||| |||||||||||||||| ||| ||||| |
|
|
| T |
4582976 |
ccactatttgtacaatgacatcaaaagttcagtccccatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcctactttgtt |
4583075 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||| | || || ||||| || ||| |
|
|
| T |
4583076 |
ttaagtgtaacaccccacaaagtgtaacacttaaaactatcacataatatcatcaactatgtttgtatgttaaagatgtcaacgatcaaataatatttgt |
4583175 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||| ||| ||||||||||||||||| |
|
|
| T |
4583176 |
aagttcaagatgttgcaagcattact |
4583201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 6546576 - 6546804
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||||| | |||||||||||| | | |||||||||||||| |||||||||||||| || |||| |||||||||||||||| ||||||||| |
|
|
| T |
6546576 |
ccactatttgtacagtaacatcaaaagtttactatccatagtatcatcaattcatcagattaacaagaatacatttaatctaattttatcctaccttgtt |
6546675 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||| |||||||||| | |||||||| |||||| ||||||||||| ||||||||||| || || |||||||||||||||| |
|
|
| T |
6546676 |
ttaagtgtaacaccccacaaagtataacacttaatattatcacatgatatcagcaactctgtttgtatgttaaagatgccaacgataaaatagtacctgt |
6546775 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || ||| ||||||||||||||| |
|
|
| T |
6546776 |
aagtctaagatgaggcaagcattactaga |
6546804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 44598741 - 44598951
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcac |
118 |
Q |
| |
|
|||||||| |||||| | ||||||||||| || |||||||||||||| || |||| ||||||||||||||| ||||||||| |||| |||||||| ||| |
|
|
| T |
44598741 |
catcaaaaattcaatccccatagtatcataaattcatcagattaacaagaatacatttaatctaattttattctaccttgttttaagtgtaacaccccac |
44598840 |
T |
 |
| Q |
119 |
aaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaa |
218 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||| | || |||||||| ||| |||||||| || ||||| ||| |
|
|
| T |
44598841 |
aaagtgtaacacctaagactatcacatgatatcaacaactctgtttgcatgttaaagatgacaacgataaaataatacatgtaagtctaagatgttacaa |
44598940 |
T |
 |
| Q |
219 |
gcattactaga |
229 |
Q |
| |
|
||||||||||| |
|
|
| T |
44598941 |
gcattactaga |
44598951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 8861342 - 8861570
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||| | | | |||||||||||||| | |||||||||||| | |||| |||||||||||||||| |||||| || |
|
|
| T |
8861342 |
ccactgtttgtacagtggcatcaaaagttaagtccccatagtatcatcaattaatcagattaacaacaatacatttaatctaattttatcctaccttatt |
8861441 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| | |||||||||||||| ||||| ||||||| |||||| |||||| |||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
8861442 |
ttaagtgtaacaccccgcaaagtgtaacactcaagaccatcacatgatatcagcaactctctttgcatgttaaagataccaacgataaaatagtacatgt |
8861541 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||| ||||||||||| |
|
|
| T |
8861542 |
aagtctaagatgttgcatgcattactaga |
8861570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 48928400 - 48928173
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| ||||||| || ||||||||||||| | | |||||||| ||||| |||||||||||||| || | ||||||||||||||||||| ||| ||||| |
|
|
| T |
48928400 |
ccactatttgtacggtgccatcaaaagttcagtcc-catagtattatcaattcatcagattaacaagattgcacttaatctaattttatcctacattgtt |
48928302 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||||||| ||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||| || || || || ||||||||| ||| |
|
|
| T |
48928301 |
ttaagtgtaacacctcagaaagtgtaatgcttaagactatcgcataatatcatcaactatgtttgcatgttaaaaatgccaacgatgaaatagtacatgt |
48928202 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||| |||||||||| |
|
|
| T |
48928201 |
aagtccaagatgttgcaaacattactaga |
48928173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 52 - 229
Target Start/End: Complemental strand, 37703551 - 37703374
Alignment:
| Q |
52 |
tcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatc |
151 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||| || ||| || |||| |||||| | ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37703551 |
tcatcagattaataagactacacttaatctaattttatcatatcttattttaagtgtaacatcccacaaagtgtaccacttaagactatcacataatatc |
37703452 |
T |
 |
| Q |
152 |
ataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| |||| |||||||||||||||||| | || ||||||||||| |||||||||||| ||||||||| |||||||||| |
|
|
| T |
37703451 |
atcaactatgtttgcatgttaaagatgtcaacgataaaatagtatctgtaagtccaagatgttgcaaacattactaga |
37703374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29173597 - 29173807
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| | ||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
29173597 |
ccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcaaactaacaagaatacacttaatctaattttatcctaccttgtt |
29173696 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||| || || || ||||||||||| |||| |
|
|
| T |
29173697 |
ttaag-----------------tgttacacttaagactatcacataatatcatcaactctgtttgcatgttaaa-atgccaacgataaaatagtatctgt |
29173778 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
29173779 |
aagtccaagatgttgcaagcattactaga |
29173807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 25691647 - 25691420
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||||| || |||||| |||||| |||| ||||||| ||||| |||||| ||||||| | |||| |||||||||||||||| |||||| || |
|
|
| T |
25691647 |
cactgtttgtacagtggcatcaacagttcagttcttatagtattatcaattcatcatattaacaaaaatacatttaatctaattttatcctaccttattt |
25691548 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||| || |||||||| || |||| |
|
|
| T |
25691547 |
taagtgtaacaccccacaaagtgtcacacttaagactatcacatgatatcagcaactctgtttgcacgttaaagatgttaacgataaaataacacatgta |
25691448 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| ||||||||||||| |||||||||| |
|
|
| T |
25691447 |
agttcaaaatgttgcaaacattactaga |
25691420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 33688364 - 33688138
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctc-atagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||| || || ||||||||||||| | ||| ||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||| ||||| |
|
|
| T |
33688364 |
actgtttgtccagtggcatcaaaagttcagt-ctctatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcatactttgttt |
33688266 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| ||||||| || ||||||||||| | |||||||||| || |||||| ||||||||||||| ||||||||| | | |||||||||||| |||| |
|
|
| T |
33688265 |
taagtgtaacactccataaagtgtaacattcaagactatcatatgatatcagcaactctgtttgcaagttaaagatgtcaatgataaaatagtacatgta |
33688166 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
33688165 |
agtccaagatgttgcaagcattactaga |
33688138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 37 - 174
Target Start/End: Original strand, 37704250 - 37704387
Alignment:
| Q |
37 |
catagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaaga |
136 |
Q |
| |
|
|||||||||||||| | |||||||||||| ||||||||||||| |||||||||| ||||||||| |||| |||||||| ||||||||||||||||||||| |
|
|
| T |
37704250 |
catagtatcatcaatttatcagattaacaagactacacttaatttaattttatcctaccttgttttaagtgtaacaccccacaaagtgtaacacttaaga |
37704349 |
T |
 |
| Q |
137 |
ctatcacataatatcataaactctgtttgcatgttaaa |
174 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
37704350 |
ctatcatataatatcatcaactctgtttgcatgttaaa |
37704387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 9 - 229
Target Start/End: Original strand, 43925167 - 43925380
Alignment:
| Q |
9 |
tgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgt |
108 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||| |||||| ||||| | ||||||||||||||||||||| ||||||||| |||| | |
|
|
| T |
43925167 |
tgtacaatgacatcaaaagttcagtctacatagtatcatcaact-atcagactaacaataatacacttaatctaattttatcataccttgttttaagtgc |
43925265 |
T |
 |
| Q |
109 |
aacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaa |
208 |
Q |
| |
|
|||||||||||| || ||| |||||| || ||||||||||||||| ||||||||||||||||||||||| || || |||||||| ||| |||||| |
|
|
| T |
43925266 |
aacacctcacaacgtttaatacttaatacaatcacataatatcatcaactctgtttgcatgttaaagatgccaacgataaaataatac------gtccaa |
43925359 |
T |
 |
| Q |
209 |
aatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
43925360 |
gatgttgcaagcattactaga |
43925380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 8 - 229
Target Start/End: Complemental strand, 46481218 - 46481005
Alignment:
| Q |
8 |
ttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcg |
107 |
Q |
| |
|
||||||||||||||||||| |||||| | ||||||||||||| |||||||| ||||| |||| || ||||||||| ||| ||||| |||| | |
|
|
| T |
46481218 |
ttgtacaatgacatcaaaaattcaatccccatagtatcatca--------gattaacaagactatacttgatgtaattttattctacattgttttaagtg |
46481127 |
T |
 |
| Q |
108 |
taacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcca |
207 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | || |||||||||||| |||||||| | |
|
|
| T |
46481126 |
taacatctcataaagtgtaacacttaagactatcacataatatcattaactttgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtcta |
46481027 |
T |
 |
| Q |
208 |
aaatgttgcaagcattactaga |
229 |
Q |
| |
|
| ||||||||| |||||||||| |
|
|
| T |
46481026 |
agatgttgcaaacattactaga |
46481005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 12165809 - 12166028
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcata-gtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgt |
99 |
Q |
| |
|
|||||||||||||| || ||||||||||| || || | || |||||||||| |||||||||||||| || |||||||||||||||||||| |||||||| |
|
|
| T |
12165809 |
ccactgtttgtacagtggcatcaaaagtt-aagtcccttaagtatcatcaattcatcagattaacaagaatacacttaatctaattttattctaccttgt |
12165907 |
T |
 |
| Q |
100 |
tataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
| |||| |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | || ||||||||||| ||| |
|
|
| T |
12165908 |
tttaagtgtaacaccccacaaagtgtaacac---------tcacataatatcagcaactctgtttgcatgttaaagatgacaacgataaaatagtatctg |
12165998 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| || |||||||||||||||||||| |
|
|
| T |
12165999 |
taagtctaagatgttgcaagcattactaga |
12166028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #38
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 31520823 - 31520620
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| |||||||||||||||| | | |||||||||||||| |||| | ||||||| |||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
31520823 |
tgtttgtacagtgacatcaaaagttcagtcc-catagtatcatcaattcattaaattaacaagactacacttaatctaattttatcataccttgttttaa |
31520725 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| || || ||||||||||| |||||||| |
|
|
| T |
31520724 |
g-----------------tgtaacacttaagactatcacataatatcatcaactctatttgcatgttaaagatgccaacgataaaatagtatctgtaagt |
31520642 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||| ||||||||||||||||| |
|
|
| T |
31520641 |
ccaagatgttgcaagcattact |
31520620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #39
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 3 - 224
Target Start/End: Original strand, 38053545 - 38053741
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
38053545 |
actgtttgtacaatgacatcaaaagttcagttctcatagtgtcatcaa--------attaacaagactacacttaatctaattttatcatactttgttat |
38053636 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
38053637 |
aag-----------------tgtaacacttaagactatcacataatatcatcaactctatttggatgttaaagattccaacaataaaatagtacctgtaa |
38053719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #40
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 22687296 - 22687516
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||| || || |||||||||||| | | |||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||| |
|
|
| T |
22687296 |
ccactgtttgtgcagtggtatcaaaagttcagtccccatagtatcatcaattcatcagattaacaataatacacttaatctaattttatcctaccttgtt |
22687395 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||||||||||| ||||||||| ||| |||||| ||||| |||||| ||| || || |||||||||||| ||| |
|
|
| T |
22687396 |
ttaagtgtaacaccccacaaagtgtaacactcaagactatctcatgatatcaacaactc--------tgttaaggatgccaacgataaaatagtacatgt |
22687487 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||||||||| |||| |
|
|
| T |
22687488 |
aagtccaagatgttgcaagcattaataga |
22687516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #41
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 27421483 - 27421313
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || ||| |||||| || | |||||||||||| || ||||||||||||||||||||| |||||| || |
|
|
| T |
27421483 |
ccactgtttgtacaatgacatcaaaagttcagtcct-ataatatcataaatttatcagattaacaagaatacacttaatctaattttatcctaccttatt |
27421385 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgtta |
172 |
Q |
| |
|
|||| |||||| | |||||||||||||||||||||||||| || |||||| |||||||||||||||||| |
|
|
| T |
27421384 |
ttaagtgtaacatcccacaaagtgtaacacttaagactatcgtatgatatcagcaactctgtttgcatgtta |
27421313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #42
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 48928667 - 48928473
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| ||||||| || ||||||||||||| | | |||||||| ||||| |||||||||||||| || | ||||||||||||||||||| ||| || || |
|
|
| T |
48928667 |
ccactatttgtacggtgccatcaaaagttcagtcc-catagtattatcaattcatcagattaacaagattgcacttaatctaattttatcctacattatt |
48928569 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtac |
196 |
Q |
| |
|
|||| ||||||||||| ||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||| || || || |||||||||||| |
|
|
| T |
48928568 |
ttaagtgtaacacctcagaaagtgtaatgcttaagactatcgcataatatcatcaactatgtttgcatgttaaaaatgccaacgataaaatagtac |
48928473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #43
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 90 - 229
Target Start/End: Original strand, 35353254 - 35353393
Alignment:
| Q |
90 |
cttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaa |
189 |
Q |
| |
|
||||||||||| |||| |||||||| || ||| ||||||||||||||||||| ||||||||||| |||| | |||||||||||||||| | || ||||| |
|
|
| T |
35353254 |
cttaccttgttttaagtgtaacaccccagaaaatgtaacacttaagactatctcataatatcatcaactatatttgcatgttaaagatgtcaacgataaa |
35353353 |
T |
 |
| Q |
190 |
atagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| | ||||||||| |||||||||||||||||||| |
|
|
| T |
35353354 |
atagtacatttaagtccaagatgttgcaagcattactaga |
35353393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #44
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 70 - 229
Target Start/End: Complemental strand, 26588119 - 26587968
Alignment:
| Q |
70 |
tacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatg |
169 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||| |||||||| |||||||||||||||| ||||||||||||| |||||| ||||| || |
|
|
| T |
26588119 |
tacacttaatctaattttatcctaccttgttttaagtgtaacaccccacaaagtgtaacactcaagactatcacatgatatcaacaactc--------tg |
26588028 |
T |
 |
| Q |
170 |
ttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| || || |||||||| ||| ||||||||||| |||||||| ||||||||||| |
|
|
| T |
26588027 |
ttaaagatgccaacgataaaataatacatgtaagtccaagatgttgcaggcattactaga |
26587968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #45
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 26980380 - 26980591
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| ||||||||| || ||||||||||||| | | |||| ||||||||| |||||| ||||||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
26980380 |
ccacggtttgtacagtggcatcaaaagttcagtccccataatatcatcaattcatcaaattaacaagaatacacttaatctaattttattctaccttgtt |
26980479 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||||| | || ||||||||||| |||| |
|
|
| T |
26980480 |
ttaag-----------------tgtaacacttaagactatcacatgatatcagcaactctatttgcatgttaaagatgtcaacgataaaatagtatctgt |
26980562 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||| ||||||||| |
|
|
| T |
26980563 |
aagtctaagatgttgcaagtattactaga |
26980591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #46
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 12390734 - 12390525
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||| || |||||||||||||| | | |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||| || |
|
|
| T |
12390734 |
ccactgtttgtgcagtgacatcaaaagttatgtccccatagtattatcaattcatcagattaacaagactacacttaatctaattttattctaccttctt |
12390635 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||| ||||| | ||||||||||||||| || | |||||||||||| ||| |
|
|
| T |
12390634 |
ttaag-----------------tgtaacacttaagact--cacataatatcatcaactcagcttgcatgttaaagatgccaatgataaaatagtacatgt |
12390554 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||| |||||||||| |
|
|
| T |
12390553 |
aagtccaagatgttgcaaccattactaga |
12390525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 44413479 - 44413351
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| ||| ||||||||||| | ||||||||| |||| |||||| ||||||| | |||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
44413479 |
tgtttgtacactgaaatcaaaagttcggtctccatagtatcttcaattcatcaaattaacaaggctacacttaatctaattttatcataccttgttttaa |
44413380 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacactta |
133 |
Q |
| |
|
| |||||||| |||||||||||||||||| |
|
|
| T |
44413379 |
gtgtaacaccccacaaagtgtaacactta |
44413351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 44411509 - 44411416
Alignment:
| Q |
136 |
actatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||||||| || || |||||||| || |||||||||||| |||||||||||||||||||| |
|
|
| T |
44411509 |
actatcacataatatcatcaactttgtttgcatgttaaagatgccaacgataaaatattatctgtaagtccaagatgttgcaagcattactaga |
44411416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 32593191 - 32593082
Alignment:
| Q |
120 |
aagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaag |
219 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| | || ||||||||||| ||||||||||| ||||| ||| |
|
|
| T |
32593191 |
aagtgtaacacttaagactatcgcataatatcatcaactatgtttgcatgttaaagatgtcaacgttaaaatagtacatgtaagtccaagatgttacaaa |
32593092 |
T |
 |
| Q |
220 |
cattactaga |
229 |
Q |
| |
|
||||||||| |
|
|
| T |
32593091 |
tattactaga |
32593082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #50
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 37704387 - 37704463
Alignment:
| Q |
149 |
atcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattac |
225 |
Q |
| |
|
||||| |||||| |||||||||||||||| || || ||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
37704387 |
atcatcaactctatttgcatgttaaagatgccaacgataaaatagtatctgtaagtccaagatgttgcaagcattac |
37704463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 32593273 - 32593194
Alignment:
| Q |
20 |
atcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| | |||| ||||||||||| ||||||||||| || ||| || |||||||||||||||| ||||||||| |
|
|
| T |
32593273 |
atcaaaagttcagt-ctcacagtatcatcaattcatcagattatcaaaactgcatttaatctaattttatcataccttgtt |
32593194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 34362126 - 34362054
Alignment:
| Q |
157 |
ctctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||||| || | || ||||||||||| |||||||||||| || |||||| |||||||||| |
|
|
| T |
34362126 |
ctctgtttgcatgttaaaaatatcaacgataaaatagtatctgtaagtccaagatattgcaaacattactaga |
34362054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 34362195 - 34362149
Alignment:
| Q |
12 |
acaatgacatcaaaagttcaattctcatagtatcatcaactcatcag |
58 |
Q |
| |
|
|||||| ||||||||||||| |||| ||||||||||||| ||||||| |
|
|
| T |
34362195 |
acaatggcatcaaaagttcagttcttatagtatcatcaattcatcag |
34362149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34362252 - 34362205
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatca |
49 |
Q |
| |
|
|||||||||||||| || ||||||| ||||| ||||||||||||||||| |
|
|
| T |
34362252 |
ccactgtttgtacagtggcatcaaa-gttcagttctcatagtatcatca |
34362205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 54)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 10922805 - 10923033
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||| |
|
|
| T |
10922805 |
ccactgtttgtacaatgacatcaaaagttcaatcctcatagtatcatcaactcatcagattaacaagactacacttaatcttattttatcataccttgtt |
10922904 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
10922905 |
ataagggtaacacctcacaaagtgtaacacttaagactgtcacataatatcatcaactctgtttgcatgttaaagattctgacaataaaatagtatctgt |
10923004 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
10923005 |
aagtccaaaatgttgcaagcattactaga |
10923033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 8222216 - 8222434
Alignment:
| Q |
11 |
tacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaa |
110 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
8222216 |
tacaatggcatcaaaagttcagttctcatagtatcatcaattcatcatattaacaagactacacttaatctcattttatcctaccttgttataagcgtaa |
8222315 |
T |
 |
| Q |
111 |
cacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaa |
210 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||| ||||||||||| | |
|
|
| T |
8222316 |
caccccacaaagtgtaacacttaaaactatcacataatatcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagtccaaga |
8222415 |
T |
 |
| Q |
211 |
tgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8222416 |
tgttgcaagcattactaga |
8222434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 32267112 - 32267340
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
32267112 |
ccactgtttgtacaatgacatcaaaagttcactcctcatattatcatcaacccatcagattaacaagattacacttaatctaattttatcctaccttgtt |
32267211 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
32267212 |
ataagcgtaacactccacaaagtgtaacactcaagactatcacataatatcatcaactttgtttgcatgttaaatattccaactataaaatagtacctgt |
32267311 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
| |||||| |||||||||||||||||||| |
|
|
| T |
32267312 |
aggtccaagatgttgcaagcattactaga |
32267340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 15383011 - 15383239
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
15383011 |
ccaccgtttgtacaatgtcatcaaaagttcagtcatcgtagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgtt |
15383110 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||||||| || |||||||||||||||| |
|
|
| T |
15383111 |
ataagcgtaacaccccacaaagtgtaacacttaaaactatcacataatatcatcaactatgtatgcatgttaaagattccaacgataaaatagtacctgt |
15383210 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| ||||| |||||||||||||||||||| |
|
|
| T |
15383211 |
aaatccaagatgttgcaagcattactaga |
15383239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 37451369 - 37451591
Alignment:
| Q |
6 |
gtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
|||||||||||||||||||||||||| | ||| |||||||||||| | |||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37451369 |
gtttgtacaatgacatcaaaagttcagtcctc-tagtatcatcaatttatcatattaacaagactacacttaatctaattttatctgaccttgttataag |
37451467 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||||||| |
|
|
| T |
37451468 |
tgtaacacctcaaaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagattccaacgataaaatagtatctgtaagtc |
37451567 |
T |
 |
| Q |
206 |
caaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| ||||||||| |||||||||| |
|
|
| T |
37451568 |
caagatgttgcaaacattactaga |
37451591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 30254502 - 30254729
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||| |||||||||| |
|
|
| T |
30254502 |
cactgtttgtacaatgacatcaaaagttcagtcctcaaagtatcatcaattcatcagattaacaagactagacttaatctaattttatcctaccttgtta |
30254601 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
||||| ||||||| | |||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| || |||||||| ||| |||| |
|
|
| T |
30254602 |
taagcataacaccctataaagtgtaacacttaagactgtcacataataacatcaactctgtttgcatgttaaagattccaacgataaaataatacatgta |
30254701 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
30254702 |
agtccaagatgttgcaagcattactaga |
30254729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 18422729 - 18422957
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | |||||| ||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
18422729 |
ccaccgtttgtacaatgacatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagattacacttaatctaattttatcctaccttgtt |
18422828 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| || |||||| || || ||| |
|
|
| T |
18422829 |
atatgcgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcacctccgtttgcatgttaaagattccaacgataaaaaagcacatgt |
18422928 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||| ||||| |
|
|
| T |
18422929 |
aagtccaagatgttgcaagcattgctaga |
18422957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 51128937 - 51129165
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | | ||||||||||||| |||||| ||||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
51128937 |
ccaccgtttgtacaatgacatcaaaagttcagtcattatagtatcatcaattcatcatattaacaagactacacttaatataattttatcataccttgtt |
51129036 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| |||||||| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| | || |||||||||||| ||| |
|
|
| T |
51129037 |
ataagtgtaacaccccacaaagtgtaacaattaaaactatcacataatatcatcaactctgtttgcatgttaaagatttcaacgataaaatagtacatgt |
51129136 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
51129137 |
aagtccaagatgttgcaagcattactaga |
51129165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 19899866 - 19899639
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||| |||| |||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||| ||| ||||| |
|
|
| T |
19899866 |
cactgtttgtagaatggcatcaaaagttcaaccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatcatacattgttc |
19899767 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||| |||| |
|
|
| T |
19899766 |
taagcgtaacaccctacaaagtgtaacacttaagactatcacataatatcaccaactctatttgcatgttaaagattccaacgataaaatagtacatgta |
19899667 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
19899666 |
agtccaagatgttgcaagcattactaga |
19899639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 25160710 - 25160936
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| | |||||||||||||||| |||| ||||||| | ||||||||||||||| |||||||| ||||||||| |
|
|
| T |
25160710 |
ccaccgtttgtacaatggcatcaaaagttcagtcctcatagtatcatcaattcattagattaataagactacacttaatctcattttatcctaccttgtt |
25160809 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||||| ||| |
|
|
| T |
25160810 |
ataagtgtaacaccccacaaagtataacacttaaaactatcacataatatcatcaactttgtttgcatgttaaagattccaacgataaaatagtacatgt |
25160909 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||||||| |||||||||||||||||| |
|
|
| T |
25160910 |
aagtccaagatgttgcaagcattacta |
25160936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 10182106 - 10181877
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||| | ||||||||||| |||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
10182106 |
ccactgtttgtacagtggcatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacaagattacacttaatctaattttatcctaccttgtt |
10182007 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacc-tg |
199 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| | |||||| ||||||||| || |
|
|
| T |
10182006 |
ttaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctggttgtatgttaaagatgacaacaatacaatagtaccttg |
10181907 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
10181906 |
taagtccaaaatgttgcaagcattactaga |
10181877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 23999425 - 23999653
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||| |||||||||||||||||| |||||||||| ||||| ||||||| |||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
23999425 |
ccactatttgtagaatgacatcaaaagttcagccctcatagtattatcaattcatcaggttaacaagactacacttaatataattttatcataccttgtt |
23999524 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | || |||||||||||||||| |
|
|
| T |
23999525 |
ctaagcataacaccctacaaagtgtaacacttaagactatcacataatatcatcaactctatttgcatgttaaagatttcaacgataaaatagtacctgt |
23999624 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
23999625 |
aagtccaagatgttgcaagcattactaga |
23999653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 27227582 - 27227355
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||||| || ||||||||||||| | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
27227582 |
cactgtttgtacagtggcatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcctaccttgttt |
27227483 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||||| ||||||||| |||||||||||||||||||| ||||||| |||| |||||||||||||||||| | || ||||||||||| ||||| |
|
|
| T |
27227482 |
taagtgtaacaccccacaaagtgcaacacttaagactatcacatgatatcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtatctgta |
27227383 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
27227382 |
agtccaagatgttgcaagcattactaga |
27227355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 30327045 - 30326822
Alignment:
| Q |
6 |
gtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
30327045 |
gtttgtacaatagcatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaaaactacacttaatctcattttatcctaccttgttataag |
30326946 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| || |||||||| ||| | |||||| |
|
|
| T |
30326945 |
cgtaacaccccacaaagtgtaacacttaaaactatcacataatatcatcaactatgtttgcatgttaaagattccaacgataaaataatacatttaagtc |
30326846 |
T |
 |
| Q |
206 |
caaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
30326845 |
caagatgttgcaagcattactaga |
30326822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 2959826 - 2960054
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | |||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |
|
|
| T |
2959826 |
ccactgtttgtacagtgacatcaaaagttcagtcctcatagtgtcatcaattcatcagattaacaagaccacacttaatctaattttatcctaccttgtt |
2959925 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||| | |||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||| || || ||||||||||| |||| |
|
|
| T |
2959926 |
tcaagtgtaacatcccacaaattgtaacacttaagactatcacataatatcatcaaatatgtttgcatgttaaagatgccaacgataaaatagtatctgt |
2960025 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
2960026 |
aagtccaagatgttgcaagcattactaga |
2960054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 15752108 - 15752324
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
15752108 |
cactgtttgtacaatggcatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttt |
15752207 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
||||||||||||| || |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| || | |||||| ||| |||| |
|
|
| T |
15752208 |
taagcgtaacaccccataaagtgtaacacttaagagtatcacataatatcattaactctgtttgcatgttaaaaattccaacgacaaaataatacatgta |
15752307 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaa |
218 |
Q |
| |
|
||||||| | ||||||| |
|
|
| T |
15752308 |
agtccaagaagttgcaa |
15752324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 32216133 - 32216361
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||| | ||||||||||| | ||| |||||||||||| |||| ||||||||| |||| |||||||| ||||||||| ||||||||| |
|
|
| T |
32216133 |
ccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtatcatcaattcattagattaacaaaactaaacttaatcaaattttatcctaccttgtt |
32216232 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || ||| |
|
|
| T |
32216233 |
ttaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccaacgataaaataatatttgt |
32216332 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||||||||| |||| |
|
|
| T |
32216333 |
aagtccaagatgttgcaagcattattaga |
32216361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 28564877 - 28564653
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| | ||||||||| |
|
|
| T |
28564877 |
actgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagactacacttaatctaattttatcatgccttgttat |
28564778 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
|||| ||||||| | ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | || |||||||| ||| ||||| |
|
|
| T |
28564777 |
aagcataacaccccgtaaagtgtaacactta--actatcacataatatcatcaactctgtttgcatgttaaagatttcaacgataaaataatacatgtaa |
28564680 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| ||||||||| |||||||||| |
|
|
| T |
28564679 |
gtccaagatgttgcaaacattactaga |
28564653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 28769730 - 28769959
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||| ||||||| |||| | |||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
28769730 |
ccaccgtttgtacaatggcatcaaaggttcggtcctcatagtatcatcaattcatcatattaacaagactacacttaatctaattttatcataccttgtt |
28769829 |
T |
 |
| Q |
101 |
ataagcgtaacacctc-acaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
|||| ||||||||| | |||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| | || ||||||||||||||| |
|
|
| T |
28769830 |
ataaacgtaacacccccacaaagtgtaacgcttaagactatcacataatatcatcacctctgtttgcatgttaaagatttcaacgataaaatagtacctg |
28769929 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||| ||||||||| |||| ||||| |
|
|
| T |
28769930 |
taagtccaagatgttgcaaacattgctaga |
28769959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 238611 - 238383
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | | |||||||||| ||| | |||||| ||||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
238611 |
ccactgtttgtacaatgacatcaaaagttcagtccccatagtatcaacaattaatcagactaacaagaatacacttaatctaattttattctaccttgtt |
238512 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| || || |||||||| || |||| |
|
|
| T |
238511 |
ttaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactatgtttgtatgttaaagatgccaacgataaaataatatctgt |
238412 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
238411 |
aagtccaagatgttgcaagcattactaga |
238383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 27533078 - 27532851
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||||| || ||||||||||||||| | |||||||||||||| |||||||||||||| || ||||||||||| ||||||||| ||||||||| |
|
|
| T |
27533078 |
ccactctttgtacagtggcatcaaaagttcaatccccatagtatcatcaattcatcagattaacaagaatacacttaatc-aattttatcctaccttgtt |
27532980 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||||||||| |||||| || |||||||||| ||||||||| || || |||||||||||| ||| |
|
|
| T |
27532979 |
ttaagtgtaacacctcacaaagtgtaacactcaagactatcacatgatatcagcaattctgtttgcaagttaaagatgccaacgataaaatagtacatgt |
27532880 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
27532879 |
aagtccaagatgttgcaagcattactaga |
27532851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 38823292 - 38823520
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||||| || ||||||||||||||| | |||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||| || || |
|
|
| T |
38823292 |
ccactatttgtacagtgtcatcaaaagttcaatccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctactttatt |
38823391 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||| || || |||||||| ||||||| |
|
|
| T |
38823392 |
ttaagtgtaacacccaacaaagtgtaacacttaagactatcacatgatatcagcaactctgtttgcatgttagagatgccaacgataaaataatacctgt |
38823491 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| ||||||||||||||||||||||| |
|
|
| T |
38823492 |
aagtctaaaatgttgcaagcattactaga |
38823520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 27763404 - 27763181
Alignment:
| Q |
6 |
gtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
||||||| ||||||||||||||| || |||||||||||||||| | ||||| |||||| |||||||||||||||||||||||| ||||| ||| |||| |
|
|
| T |
27763404 |
gtttgtagaatgacatcaaaagtccagccctcatagtatcatcaatttatcaggttaacaagactacacttaatctaattttatcatacctagttctaag |
27763305 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||| || |||||| ||||||||||||||||||| || ||||||||||| |||||||| |
|
|
| T |
27763304 |
cgtaacaccctacaaagtgtaatacttaagactatcacataatataatcaactctatttgcatgttaaagattccaacgataaaatagtatctgtaagtt |
27763205 |
T |
 |
| Q |
206 |
caaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
27763204 |
caagatgttgcaagcattactaga |
27763181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 47682592 - 47682366
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||| ||||||| || |||||||||||| | |||||||||||||||| |||||||||||||| ||||||| |||| |||||||||| | ||||||| |
|
|
| T |
47682592 |
ccactgcttgtacagtggtatcaaaagttcattcctcatagtatcatcaattcatcagattaacaagactacatttaaactaattttattctgccttgtt |
47682493 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| | || |||||||||||||||| |
|
|
| T |
47682492 |
ttaagtgtaacacctcacaaagtgtaacacttaagactatcatataatatcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacctgt |
47682393 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|| ||||| |||||||||||||||||| |
|
|
| T |
47682392 |
aaatccaagatgttgcaagcattacta |
47682366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 9903149 - 9902924
Alignment:
| Q |
4 |
ctgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttata |
103 |
Q |
| |
|
||||||||||| |||||||||||||||||| | |||| ||||||||| |||||| ||||||| |||||||||||||||||||||||||||| ||||| | |
|
|
| T |
9903149 |
ctgtttgtacagtgacatcaaaagttcaatccacatactatcatcaattcatcaaattaacaagactacacttaatctaattttatcttacattgtttca |
9903050 |
T |
 |
| Q |
104 |
agcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaag |
203 |
Q |
| |
|
|| |||||||| |||||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||| | || ||||||||||||| ||||| |
|
|
| T |
9903049 |
agtgtaacaccccacaaaatgtaacacttaagactatcacataatatcatcaaatttgtttgcatgttaaagatgacaacgataaaatagtaccagtaag |
9902950 |
T |
 |
| Q |
204 |
tccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| ||| |||||||| ||||||| |
|
|
| T |
9902949 |
tccaagatgctgcaagcactactaga |
9902924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 46931489 - 46931715
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| || | |||||||| |||| |||||| ||||||||| ||||||| |||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
46931489 |
ccactgtttgtagaacggcatcaaaaattcagccctcataatatcatcaattcatcaggttaacaagactacacttaatataattttatcataccttgtt |
46931588 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | || |||||||||||||||| |
|
|
| T |
46931589 |
c--agcgtaacaccctacaaagtgtaacacttaagactatcacataatatcatcaactctatttgcatgttaaagatttcaacgataaaatagtacctgt |
46931686 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
46931687 |
aagtccaagatgttgcaagcattactaga |
46931715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 4330363 - 4330587
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| || |||||||||||| | ||||||||||||||| | |||||||||||| |||| ||||||||||||||||||| ||||||||| ||| |
|
|
| T |
4330363 |
tgtttgtacagtgggatcaaaagttcagtcatcatagtatcatcaatttatcagattaacaagactgcacttaatctaattttatcctaccttgttttaa |
4330462 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||||||| |||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | | |||||||||||| ||||||| |
|
|
| T |
4330463 |
gtgtaacaccccacaaaatgtaacacttaagactatcacataatatcatcaactctttttgcatgttaaagatgtcaaagataaaatagtacttgtaagt |
4330562 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
4330563 |
ccaatatgttgcaagcattactaga |
4330587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 16415728 - 16415952
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| || ||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
16415728 |
tgtttgtacagtggcatcaaaagttcagccatcatagtatcatcaattcattagattaacaagactacacttaatctaattttatcctaccttgttttaa |
16415827 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||| ||| |||| | ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||| ||||||| |
|
|
| T |
16415828 |
gtgtaataccccacatattgtaatacttaagactatcacataatatcatcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagt |
16415927 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||||||||||||||| |||| |
|
|
| T |
16415928 |
ccaagatgttgcaagcattattaga |
16415952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 27267297 - 27267070
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||| ||||||||| | |||||||||||||| |||||||||||||| |||||||||||||||||||| |||| |||||||| |
|
|
| T |
27267297 |
ccactgtttgtacagtggcattaaaagttcagtctccatagtatcatcaattcatcagattaacaagactacacttaatctaatttaatct-accttgtt |
27267199 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
| || |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||||| |||| |
|
|
| T |
27267198 |
ttgagtgtaacaccccacaaagtgcaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagatgtcaacgataaaatagtatctgt |
27267099 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
27267098 |
aagtctaagatgttgcaagcattactaga |
27267070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 47279267 - 47279495
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || |||| |||||||| | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
47279267 |
ccactgtttgtacagtggcatcgaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgtt |
47279366 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||| | || ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| || |||||||||||||| |||| |
|
|
| T |
47279367 |
ttaattgtaacatcccataaagtgtaacacttaagactatcacatgatatcaacaactatgtttgcatgttaaagatgccaacaataaaatagtatctgt |
47279466 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||| ||||| |||| |
|
|
| T |
47279467 |
aagtccaagatgttgcaaacattattaga |
47279495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 7079160 - 7078933
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
7079160 |
cactgtttgtacaatgacatcaaaagttcagtcatcatagtatcatcaattcatcaaattaacaagaatacacttaatctaattttatcctaccttgttt |
7079061 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||||| |||||||| ||| ||||||||||||||||| |||||| ||||||||||||||||||||||| || || ||||||||||| |||| |
|
|
| T |
7079060 |
taagtgtaacaccccacaaagtataagacttaagactatcacatgatatcaacaactctgtttgcatgttaaagatgccaacgataaaatagtatatgta |
7078961 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| || || |||||| |||||||||| |
|
|
| T |
7078960 |
agtctaagatattgcaaacattactaga |
7078933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 42721117 - 42721342
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| | |||||||||||||||| | |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
42721117 |
ccactgtttgtacagtaacatcaaaagttcaatccccatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgtt |
42721216 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||| ||| |||||||| |||||||||||| |||||| ||||||||| |||| ||||||||||||||||| | || |||||||| ||| ||| |
|
|
| T |
42721217 |
ttaagtgtaataccccacaaagtataacacttaagattatcacgtaatatcatcaactttgtttgcatgttaaaga---caacgataaaatattacatgt |
42721313 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||| ||||||||| |
|
|
| T |
42721314 |
aagtccaagatgttgcaattattactaga |
42721342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 37618992 - 37618771
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtat--catcaactcatcagattaacacgactacacttaatctaattttatcttaccttg |
98 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
37618992 |
ccactgtttgtaaaatgacatcaaaagttcagttctcatagtatatcatcaattcatcagattaacaatactacacttaatctaattttatcctaccttg |
37618893 |
T |
 |
| Q |
99 |
ttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacct |
198 |
Q |
| |
|
|||||||| ||||| | || |||||||||||| ||| |||||||||| |||||||||||||||||||||||||| || |||||||| ||| | |
|
|
| T |
37618892 |
ttataagcataacatcccataaagtgtaacac---------tcatataatatcatcaactctgtttgcatgttaaagattccaacgataaaataatacat |
37618802 |
T |
 |
| Q |
199 |
gtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |
|
|
| T |
37618801 |
gtaagtccaagatgttgcaagcattactaga |
37618771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 15168192 - 15168402
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcac |
118 |
Q |
| |
|
||||||||||||| | | |||||||||||||| |||||||||||||| |||| || |||||||||||||||| ||||||||| |||| ||||||||||| |
|
|
| T |
15168192 |
catcaaaagttcagtccccatagtatcatcaattcatcagattaacaagactgcagttaatctaattttatcctaccttgttttaagtgtaacacctcag |
15168291 |
T |
 |
| Q |
119 |
aaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaa |
218 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||||| | || |||||||||||| ||||||| ||| ||||||||| |
|
|
| T |
15168292 |
aaagtgtaacacttaaggctatcgcataatatcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtacaagatgttgcaa |
15168391 |
T |
 |
| Q |
219 |
gcattactaga |
229 |
Q |
| |
|
|||||| |||| |
|
|
| T |
15168392 |
gcattattaga |
15168402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 27564003 - 27563775
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| | |||||||||||||||| ||| ||| ||| ||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
27564003 |
ccactgtttgtatagtgacatcaaaagttcagttccgataatattatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgtt |
27563904 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||| ||| ||||||| | ||||||||||||||||| ||||| |||| ||||||||||||||||||||||| | || ||||||||||| ||| |
|
|
| T |
27563903 |
ttaagtataataccccacaaagaggaacacttaagactatcatataatttcatcaactctgtttgcatgttaaagatgcaaacgataaaatagtatatgt |
27563804 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||| ||||||||| |
|
|
| T |
27563803 |
aagtccaagatgttgcaagtattactaga |
27563775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 33725680 - 33725472
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcac |
118 |
Q |
| |
|
||||||||||||| | |||||||||||||||| |||||| ||||||| |||| ||||||||||||||||| | ||||||||| |||| |||||||| || |
|
|
| T |
33725680 |
catcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagactgcacttaatctaattttaccctaccttgttttaagtgtaacaccccag |
33725581 |
T |
 |
| Q |
119 |
aaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaa |
218 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||| |||| |||||||||||||||||| | || |||||||||||| |||||| |||||||||||||| |
|
|
| T |
33725580 |
aaagtgtaacatttaagactatcgcataatatcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagaccaaaatgttgcaa |
33725481 |
T |
 |
| Q |
219 |
gcattacta |
227 |
Q |
| |
|
|||||||| |
|
|
| T |
33725480 |
acattacta |
33725472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 40884891 - 40885119
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||| || ||||||||||||| | | |||||||| |||| |||||||||||||| || | ||||||||||| ||||||| || |||||| |
|
|
| T |
40884891 |
ccactgtttgtacggtggcatcaaaagttcagtccctatagtatcttcaattcatcagattaacaagattgcacttaatctagttttatcctatcttgtt |
40884990 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| | ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||| |||||||||||| ||| |
|
|
| T |
40884991 |
ttaagtgtaacattccgaaaagtgtaacacttaagactatcgcataatatcatcaactatgtttgcatgttaaagatgccgatgataaaatagtacatgt |
40885090 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||| |||||||||| |
|
|
| T |
40885091 |
aagtccaagatgttgcaaacattactaga |
40885119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #38
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3309225 - 3309459
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttaccttgt |
99 |
Q |
| |
|
|||||||||||||| || |||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||| | | ||| |||| |
|
|
| T |
3309225 |
ccactgtttgtacagtggtatcaaaagttcaatcttcatagtatcatcaattcatcagattaacaagaatacacttaatctaatttttaacctactttgt |
3309324 |
T |
 |
| Q |
100 |
tataagcgtaacacctcacaa-----agtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagt |
194 |
Q |
| |
|
| ||| |||||||||||| | |||||||||||||||||||||| || |||||| ||||||||||| ||||||||||| || || |||||||||| |
|
|
| T |
3309325 |
tttaaatgtaacacctcactacactaagtgtaacacttaagactatcaaatgatatcagcaactctgtttgtatgttaaagatgccaacgataaaatagt |
3309424 |
T |
 |
| Q |
195 |
acctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| |||||||||| || ||||||||||||||||| |
|
|
| T |
3309425 |
acccgtaagtccaagatattgcaagcattactaga |
3309459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #39
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 34012475 - 34012254
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| | || ||||||||||||| | ||||| ||||||||| |||||||||||||| || ||||||||||||||||||||| |||||||| |
|
|
| T |
34012475 |
ccactgtttgtaaagtggcatcaaaagttcagtcatcatactatcatcaattcatcagattaacaagattacacttaatctaattttatccaaccttgtt |
34012376 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||| |||||| |||||||| |||||||||||||||||| || |||||||||||||||||||| || || ||||||||||| ||| |
|
|
| T |
34012375 |
tcaagtgtaacaccccacaaaatgtaacac-----actatcacataatatcatcaaatctgtttgcatgttaaagatgccaacgataaaatagtatatgt |
34012281 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||| ||| |||||||||||||||||| |
|
|
| T |
34012280 |
aagttcaagatgttgcaagcattacta |
34012254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #40
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 41926241 - 41926462
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||| ||||||| | | ||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||| ||||| |
|
|
| T |
41926241 |
ccactgtttgtacagtggcatcacaagttcagtccctatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcctactttgtt |
41926340 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||| |||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||| |
|
|
| T |
41926341 |
ttaagtgtaacactccacaaagtgtaacact------tattaaataatatcatcaactctgtttgcatgttaaagatgccaacaataaaatagtacttgt |
41926434 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| || || |||||||||||||| |
|
|
| T |
41926435 |
aagtccaagatatt-caagcattactaga |
41926462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #41
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 14758121 - 14758338
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||||||| || ||||||||||||| | | |||||| ||||||| |||| ||||||||| |||| ||||||||||||||||||| ||||||||| | |
|
|
| T |
14758121 |
actgtttgtacggtggcatcaaaagttcagtccccatagtttcatcaattcattagattaacaagactgcacttaatctaattttatcctaccttgtttt |
14758220 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| |||||||| || ||| ||||||||||| ||||||||||| |||| |||||||||||||||||| || || |||||||||||| ||||| |
|
|
| T |
14758221 |
aagtgtaacaccccagaaa---------ttaagactatcgcataatatcatcaactatgtttgcatgttaaagatgccaacgataaaatagtacatgtaa |
14758311 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
14758312 |
gtccaagatgttgcaagcattactaga |
14758338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #42
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 39393465 - 39393690
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttaccttgttata |
103 |
Q |
| |
|
|||||||||| || ||||||||||| ||| | ||||||||||| || |||||||||||||| || ||||||| |||||||||| ||| ||||||||| || |
|
|
| T |
39393465 |
tgtttgtacagtggcatcaaaagtttaatccccatagtatcataaattcatcagattaacaagaatacacttcatctaatttttatcctaccttgtttta |
39393564 |
T |
 |
| Q |
104 |
agcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaag |
203 |
Q |
| |
|
|| |||||| | |||||||||||||||||||||||||| || |||| | |||||||||| |||||||||||| || | ||||||||||||| |||| |
|
|
| T |
39393565 |
agtgtaacatcctacaaagtgtaacacttaagactatcatatgatattagcaactctgtttccatgttaaagatgccaatgataaaatagtaccggtaaa |
39393664 |
T |
 |
| Q |
204 |
tccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| ||||||||| |||||||||| |
|
|
| T |
39393665 |
tccaagatgttgcaaacattactaga |
39393690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #43
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 3535012 - 3535229
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||||| || |||||||||||||||| | | | || ||| ||||| |||||||||||||| || |||| |||||||||||||||| | ||||||| | |
|
|
| T |
3535012 |
actgtttgtgcagtgacatcaaaagttcagtccccttaatattatcaattcatcagattaacaagaatacatttaatctaattttatcctgccttgtttt |
3535111 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| |||||||| ||||||||||||||||| |||| |||||| ||||||||||||||||||||||| || || |||||||||||||| ||| |
|
|
| T |
3535112 |
aagtgtaacaccccacaaagtgtaacactt---------acatgatatcagcaactctgtttgcatgttaaagatgccaacgataaaatagtacctttaa |
3535202 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
3535203 |
gtccaagatgttgcaagcattactaga |
3535229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #44
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 22170806 - 22171017
Alignment:
| Q |
18 |
acatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctca |
117 |
Q |
| |
|
|||||||||||||| | |||| ||||||||| |||| ||||||| | ||||||||||||||||||| ||| ||||||||| || |||||||| || |
|
|
| T |
22170806 |
acatcaaaagttcagtctacataatatcatcaattcattagattaataacactacacttaatctaatttcatcctaccttgtttcaaatgtaacacccca |
22170905 |
T |
 |
| Q |
118 |
caaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | || |||||||| | | |||||||| || |||||||| |
|
|
| T |
22170906 |
caaagtgtaacacttaagactatcacataatatcatcaaatctgtttgcatgttaaagatgtcaacgataaaataattcttgtaagtctaagatgttgca |
22171005 |
T |
 |
| Q |
218 |
agcattactaga |
229 |
Q |
| |
|
| ||||| |||| |
|
|
| T |
22171006 |
aacattattaga |
22171017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #45
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 48620715 - 48620906
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | | | |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||| ||||| |
|
|
| T |
48620715 |
ccactgtttgtacagtgacatcaaaagttcagtccccttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctactttgtt |
48620814 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||||| || || | ||||||||||||| |
|
|
| T |
48620815 |
ttaagtgtaacaccccacaaagtgtaacac---------tcacatgatatcagcaactctgtttgcatgttaaagatgccaacgaataaatagtacctgt |
48620905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #46
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 31621633 - 31621419
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcac |
118 |
Q |
| |
|
|||||||| |||| | | |||||||||||||| |||||||||||||| |||| ||||||||||||||||||| ||||||||| |||| | || ||| || |
|
|
| T |
31621633 |
catcaaaaattcagtccccatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcctaccttgttttaagtgcaataccccag |
31621534 |
T |
 |
| Q |
119 |
aaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaa-----agattccgacaataaaatagtacctgtaagtccaaaatgt |
213 |
Q |
| |
|
|| |||| ||||||||||||||| |||||||||| |||| |||||||||||||| |||| || || |||||||||||| ||||||| ||| |||| |
|
|
| T |
31621533 |
aa-gtgtgacacttaagactatcgcataatatcaacaactatgtttgcatgttaagttaaagatgccaacgataaaatagtacatgtaagttcaatatgt |
31621435 |
T |
 |
| Q |
214 |
tgcaagcattactaga |
229 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
31621434 |
tgcaagcattagtaga |
31621419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #47
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 1359918 - 1359808
Alignment:
| Q |
116 |
cacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttg |
215 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||| |||||||||| |
|
|
| T |
1359918 |
cacaaagtgtaacacttaagattatcatataatatcatcaactatgtttgcatgttaaagattccaacgataaaatagtacctgtaagttcaaaatgttg |
1359819 |
T |
 |
| Q |
216 |
caagcattact |
226 |
Q |
| |
|
||||||||||| |
|
|
| T |
1359818 |
caagcattact |
1359808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #48
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1547365 - 1547577
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||| || || ||||||||||||| ||||||||||||||| |||||||||| | ||||||||||||||||||||| ||| ||||| |
|
|
| T |
1547365 |
ccactgtttgtgcagtggcatcaaaagttcagttctcatagtatcat--------cagattaacaaaaatacacttaatctaattttatcctactttgtt |
1547456 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||||||||||| || |||||||||| |||||| ||||| |||||||||| || || |||||||||||| ||| |
|
|
| T |
1547457 |
ttaagtgtaacaccccacaaagtgtaacactcaaaactatcacatgatatcaacaactc--------tgttaaagataccaacgataaaatagtacatgt |
1547548 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
1547549 |
aagtccaagatgttgcaagcattactaga |
1547577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #49
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 11742448 - 11742238
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | | |||| ||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
11742448 |
ccactgtttgtacagtgacatcaaaagttcagtcc-cataatatcatcaattcatcggattaacaagaatacacttaatctaattttatcttaccttgtt |
11742350 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
| |||||||||| ||||||||||||||| |||||| |||||| |||| ||||||||||| | || |||||||||||| ||| |
|
|
| T |
11742349 |
tt-----------------aagtgtaacaattaagactatcacatgatatcagcaactctctttgtatgttaaagatgtcaacgataaaatagtacatgt |
11742267 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
11742266 |
aagtccaagatgttgcaagcattactaga |
11742238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #50
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 38759610 - 38759839
Alignment:
| Q |
4 |
ctgtttgtacaatgacatcaaaagttca---attct-catagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgt |
99 |
Q |
| |
|
||||||||||| |||||||||||||||| | ||| | || ||||||||| |||||| ||||| | |||||| ||||| |||||||||| || ||| | |
|
|
| T |
38759610 |
ctgtttgtacagtgacatcaaaagttcagccagtcttcgtaatatcatcaattcatcatattaataaaactacatttaatttaattttatcatatcttat |
38759709 |
T |
 |
| Q |
100 |
tataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
| |||| |||||||| ||||||||||||||||| ||||||||| ||||||||| |||| |||||||||||||||| | | || |||||||| || || |
|
|
| T |
38759710 |
tttaagtgtaacaccccacaaagtgtaacacttgagactatcagataatatcaccaactatgtttgcatgttaaaggtgtcaactataaaataatatatg |
38759809 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| ||||| |||||||||||||||||||| |
|
|
| T |
38759810 |
taactccaagatgttgcaagcattactaga |
38759839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #51
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 48353736 - 48353848
Alignment:
| Q |
116 |
cacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttg |
215 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| | || ||||||||||| |||||||||||| || ||| |
|
|
| T |
48353736 |
cacaaagtgtaacact-aagactatcacatgatatcagcaactctgtttgcatgttaaagatgtcaacgataaaatagtatctgtaagtccaagatattg |
48353834 |
T |
 |
| Q |
216 |
caagcattactaga |
229 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
48353835 |
caagcattactaga |
48353848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 21289817 - 21289906
Alignment:
| Q |
137 |
ctatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||| || || |||||||| || | ||||||||| ||||||||| |||||||||| |
|
|
| T |
21289817 |
ctatcacataatatca---actctgtttgcatattaaagatgccaacgataaaataacacttataagtccaagatgttgcaaacattactaga |
21289906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21289750 - 21289814
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaaca |
65 |
Q |
| |
|
|||||||||||||| || ||||||||||||| | | ||||||||||||| |||||||||||||| |
|
|
| T |
21289750 |
ccactgtttgtacagtggcatcaaaagttcagtccctatagtatcatcaattcatcagattaaca |
21289814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 1359977 - 1359933
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatca |
49 |
Q |
| |
|
|||||||| |||||||||||||||||| | ||| ||||||||||| |
|
|
| T |
1359977 |
tgtttgtataatgacatcaaaagttcagtcctcgtagtatcatca |
1359933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 45)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 1149741 - 1149513
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
1149741 |
ccactgtttgtacaatgacatcaaaagttctgtcctcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcttaccttgtt |
1149642 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
1149641 |
ataagcgtaacaccccacaaagtgtaacacttaagactatcacataatattatcaactttgtttgcatgttaaagattccaacgataaaatagtacctgt |
1149542 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
1149541 |
aagtccaagatgttgcaagcattactaga |
1149513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 43643702 - 43643476
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
43643702 |
actgtttgtacaatgacatccaaagttcaatcttcatagtatcatcaactcatcagattaacaagactacacttgatctaattttatcctaccttgttat |
43643603 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
43643602 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatattatcaactctgtttgcatgttaaaaattccgacaataaaatagtacatgtaa |
43643503 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
43643502 |
gtccaagatgttgcaagcattactaga |
43643476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 10555311 - 10555085
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
10555311 |
ccactgtttgtacaatgacatcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgtt |
10555212 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10555211 |
ataagcgcaacacctcacaaaacgtaacactt--gactatcacataatatcatcaactttgtttgcatgttaaagattccgacaataaaatagtacctgt |
10555114 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| || ||||||||||||||||| |
|
|
| T |
10555113 |
aagtccaagatattgcaagcattactaga |
10555085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 23854538 - 23854312
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||||| ||||||||||||||||||| | ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||| |
|
|
| T |
23854538 |
actgtttgtgcaatgacatcaaaagttcagtcctcatagtatcatcaactcattagattaacaatactacaattaatctaattttatcttacctagttat |
23854439 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| |||||||| || ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23854438 |
aagtgtaacaccgcataaagtgtaacacttaagacaatcacataatatcatcaactctgcttgcatgttaaagattccgacaataaaatagtacctgtaa |
23854339 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
23854338 |
gtccaagatgttgcaagcattactaga |
23854312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 37970628 - 37970400
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
37970628 |
ccactgtttgtacaatgccatcaaaagttcagccctcatagtatcatcaattcatatgattaacaagactacacttaatctaattttatcctaccttgtt |
37970529 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
37970528 |
ataagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagatccttacaataaaatagtacctgt |
37970429 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
37970428 |
aagtccaagatgttgcaagcattactaga |
37970400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 1205009 - 1205236
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
1205009 |
cactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcagttcatcatattaacaagattacacttaatctaattttatcttaccttgttt |
1205108 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
1205109 |
taagcgtaacaccccacaaagtgtaacacttaagactatcgcataatatcatcaactctgtttgcatgttaaagattttaacgataaaatagtacctgta |
1205208 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||| ||||||||| |
|
|
| T |
1205209 |
agtccaagatgttgcaagtattactaga |
1205236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 7891066 - 7890838
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||| |||||||||||| | |||||| ||||||||| |||||||||||||| ||||||||| |||||| ||||||||||| ||||| |
|
|
| T |
7891066 |
ccaccgtttgtacaatggcatcaaaagttcggtcctcataatatcatcaattcatcagattaacaagactacactcaatctagttttatcttactttgtt |
7890967 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||| || |||||||||||| ||| |
|
|
| T |
7890966 |
ataagcgtaacaccccacaacgtgtaacacttaagattatcacataatatcatcaactctggttgcatgttaaagattccaacgataaaatagtacatgt |
7890867 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| ||||||||||||||||||||||| |
|
|
| T |
7890866 |
aagtctaaaatgttgcaagcattactaga |
7890838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 36695075 - 36694847
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | | |||||||||||||| |||||||| ||| | || ||||||||||||||||||||| ||| ||||| |
|
|
| T |
36695075 |
ccactgtttgtacaatgacatcaaaagttcagtccccatagtatcatcaattcatcagactaagaagaatacacttaatctaattttatcctacattgtt |
36694976 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
36694975 |
ttaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgt |
36694876 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| ||||| ||||||||||||| |||||| |
|
|
| T |
36694875 |
aaatccaagatgttgcaagcatcactaga |
36694847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 9864229 - 9864457
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | | |||| ||||||||| |||||||| ||| | || |||||||||| |||||||||| ||||||||| |
|
|
| T |
9864229 |
ccactgtttgtacaatgacatcaaaagttcagtccccataatatcatcaattcatcagactaataagaatacacttaatataattttatcctaccttgtt |
9864328 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
9864329 |
ttaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaattttgtttgcatgttaaagatgccaacgataaaatagtacctgt |
9864428 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||| |||||||||||||||||||| |
|
|
| T |
9864429 |
aagttcaagatgttgcaagcattactaga |
9864457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16222944 - 16223172
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| | ||||||| |
|
|
| T |
16222944 |
ccacagtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatccgattaacaagactacacttaatctaattttatccttccttgtt |
16223043 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| ||||||||| || |||||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||| | |||||||||||| ||| |
|
|
| T |
16223044 |
ttaaacgtaacaccccaaaaagtgtaacacttaagagtatcacataatatcatcaactttgtttgcattttaaagattccaatgataaaatagtacatgt |
16223143 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
16223144 |
aagtctaagatgttgcaagcattactaga |
16223172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 27082947 - 27082719
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||| || || ||| ||||||||| | |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
27082947 |
ccactgtttgtgcagtggcattaaaagttcagtcctcatagtatcatcaattcatcaaattaacaagactacacttaatctaattttatcttaccatgtt |
27082848 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | || |||||||||||| ||| |
|
|
| T |
27082847 |
ttaagtctaacaccccgcaaagtgtaacacttaagactatcacataatatcataaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgt |
27082748 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
27082747 |
aagtccaagatgttgcaagcattactaga |
27082719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 12876192 - 12876419
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||| | | ||||||||||||||||||||| |||||| || | |
|
|
| T |
12876192 |
actgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaagaaggatacacttaatctaattttatcctaccttatttt |
12876291 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacactt-aagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||| |||| |
|
|
| T |
12876292 |
aagcgtaacaccccacaaagtgtaacacttaaagactatcacataatatcatcaactctgtttgcatgttaaagatgtcaacgataaaatagtacatgta |
12876391 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| ||||| || ||||||||||| |
|
|
| T |
12876392 |
agtccaagatgttacaggcattactaga |
12876419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 35459819 - 35459592
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||| |||||||||||||| ||||||||| | |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| |
|
|
| T |
35459819 |
cactgattgtacaatgacattaaaagttcagtcctcataatatcatcaactcatcagattaacaagactacacttaatctaattttatcctactttgtta |
35459720 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
||| |||||| | |||| | | |||||||||||||||| |||||||||||| || |||||||| |||||||||||| |||||||||||||||| ||||| |
|
|
| T |
35459719 |
taaatgtaacatcccacagattataacacttaagactattacataatatcatcaattctgtttgtatgttaaagatttcgacaataaaatagtatctgta |
35459620 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||| |||||||||| |
|
|
| T |
35459619 |
agtccaaaatgttgcaaacattactaga |
35459592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 6098627 - 6098394
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | | ||||||||| |||| |||||||||||||| ||||||| |||||||||||||||| || |||||| |
|
|
| T |
6098627 |
ccactgtttgtacagtgacatcaaaagttcagtccccatagtatcgtcaattcatcagattaacaagactacatttaatctaattttatcctatcttgtt |
6098528 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattcc-----gacaataaaatagta |
195 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||| ||||||| |
|
|
| T |
6098527 |
ttaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagatgccaacgatacaatacaatagta |
6098428 |
T |
 |
| Q |
196 |
cctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||| |
|
|
| T |
6098427 |
cttgtaagtccaagatgttgcaagcattactaga |
6098394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 16446984 - 16446756
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| |||| ||||||||||| | | | |||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
16446984 |
ccactgtttgtataatggcatcaaaagtttagtccccatactatcatcaattcatcagattaacaagactacacttaatttaattttatcctaccttgtt |
16446885 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||| || | |||||||||||||||| |
|
|
| T |
16446884 |
tcaagtgtaacaccccacaaagcgtaacacttaagactatcacataatatcatcaaatctgtttgcatgttaaagatgccaatgataaaatagtacctgt |
16446785 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
16446784 |
aagtccaagatgttgcaagcattactaga |
16446756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 30654692 - 30654466
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| |||||||| | ||| ||||| |
|
|
| T |
30654692 |
ccactgtttgttgaatgacatcaaaagttcagccttcatagtatcatcacttcatcaggttaacaagactacacttaatttaattttaccatacattgtt |
30654593 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | || |||||||||||||||| |
|
|
| T |
30654592 |
ttaagcgtaacaccctacaaagtgtaacacttaagactatcacataatatcataaactctatttgcatgttaaaaatttcaacgataaaatagtacctgt |
30654493 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||||||| |||||||||||||||||| |
|
|
| T |
30654492 |
aagtccaagatgttgcaagcattacta |
30654466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 31933995 - 31933767
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| ||| ||||||||||||||||||||| | | ||||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
31933995 |
ccactctttatacaatgacatcaaaagttcagtcattatagtatcatcaattcatccgattaacaagactacacttaatctaattttatcataccttgtt |
31933896 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||| ||| ||| ||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| |||||| ||||||||||||||| ||| |
|
|
| T |
31933895 |
ataagcataataccgcacaaagtgtaacacttaaaattatcacataatatcatcaagtctgtttgcatgttaaggattccaacaataaaatagtacttgt |
31933796 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || || ||||| |||||||||| |
|
|
| T |
31933795 |
aagtctaagatattgcagacattactaga |
31933767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 5300053 - 5299827
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
|||||||||||| || ||||||||||||| | || ||||||||||||| |||||||||||||| || ||||||||||||||||||||| |||||||| | |
|
|
| T |
5300053 |
actgtttgtacagtggcatcaaaagttcagtccttatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatccaaccttgtttt |
5299954 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| |||||||| ||||||||||||||||||||| ||||| || |||||| || | |||||||||||||||||| | || |||||||||||| ||||| |
|
|
| T |
5299953 |
aagtgtaacaccccacaaagtgtaacacttaagattatcaaatgatatcagcaattttgtttgcatgttaaagataacaacgataaaatagtacatgtaa |
5299854 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
5299853 |
gtccaagatgttgcaagcattactaga |
5299827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 4132750 - 4132567
Alignment:
| Q |
45 |
catcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcaca |
144 |
Q |
| |
|
|||||| |||||| ||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
4132750 |
catcaattcatcaaattaacaagactacacttaatctaattttattctaccttgtt-taagtgtaacaccccacaaagtgtaacacataagactatcaca |
4132652 |
T |
 |
| Q |
145 |
taatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||| |||| |||||||||||||||||| || || |||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4132651 |
taatatcatcaactatgtttgcatgttaaagatgccaacgataaaatagtacctgtaagtccaagatgttgcaagcattactaga |
4132567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 33906328 - 33906521
Alignment:
| Q |
36 |
tcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaag |
135 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| ||||||||| |||| |||||| || ||||||||||||||||| |
|
|
| T |
33906328 |
tcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcataccttgttttaagggtaacattccaaaaagtgtaacacttaag |
33906427 |
T |
 |
| Q |
136 |
actatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| ||||||||||| |||| |||||||||||||||||| | || |||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
33906428 |
actatcgcataatatcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactaga |
33906521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 42 - 225
Target Start/End: Complemental strand, 8803885 - 8803702
Alignment:
| Q |
42 |
tatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatc |
141 |
Q |
| |
|
||||||||| | ||||| |||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||| | |||||||||||||||| |||||| |
|
|
| T |
8803885 |
tatcatcaatttatcaggttaacaagactacacttaatataattttatcataccttgttctaagcgtaacaccctaaaaagtgtaacacttaatactatc |
8803786 |
T |
 |
| Q |
142 |
acataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattac |
225 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||| || |||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
8803785 |
acataatatcatcaactctatttgcatgttaaagattccaacgataaaatagtacatgtaagtccaagatgttgcaagcattac |
8803702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 39099228 - 39099000
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||||| | ||||||||||||| | ||||||||||| |||| |||||||||||||| | |||||||||||||||||||||||||| |||| |
|
|
| T |
39099228 |
ccactctttgtacactagcatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacaaaaatacacttaatctaattttatcttaccctgtt |
39099129 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| | |||||||| | ||||||||||||||| ||| |||||| |||||||||||||||||||| || | || ||||||||||| ||| |
|
|
| T |
39099128 |
ttaagtgtaacatcccacaaagtatcacacttaagactatcgcatgatatcagcaactctgtttgcatgttaaatatgtcaacgataaaatagtatatgt |
39099029 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
39099028 |
aagtccaaaatgttgcaagcattactaga |
39099000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 40862501 - 40862728
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | ||||| |||||||||| | ||| | ||||| | ||||||||||||||||||||| ||| ||||| |
|
|
| T |
40862501 |
ccactgtttgtacaatggcatcaaaagttcagt-ctcatggtatcatcaatttttcatactaacaaaaatacacttaatctaattttatcctactttgtt |
40862599 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||||||||||| || |||| |||||| ||||||||||| | || |||||||||||| ||| |
|
|
| T |
40862600 |
ctaagtgtaacactccacaaagtgtaacacttaagactatcacataatattatcaactatgtttgtatgttaaagatgtcaacgataaaatagtacatgt |
40862699 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
40862700 |
aagtccaagatgttgcaagcattactaga |
40862728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 1954081 - 1953869
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatc-atcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaaca-cctc |
116 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| |||||||||||| | ||||||||| |||||||||||||| ||||||||| |||| |||||| || | |
|
|
| T |
1954081 |
catcaaaagttcagccctcatagtatctatcaattcatcagattaatatgactacactaaatctaattttatcataccttgttttaagtgtaacatcccc |
1953982 |
T |
 |
| Q |
117 |
acaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgc |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| | | || |||||||||||||||||| ||||| || |||| |
|
|
| T |
1953981 |
acaaagtgtaacacttaagactatcacataacatcatcaactctgtttgcatgttaaagttgtcaacgataaaatagtacctgtaaatccaagattttgc |
1953882 |
T |
 |
| Q |
217 |
aagcattactaga |
229 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
1953881 |
aagcattattaga |
1953869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 11727105 - 11727333
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||| | || ||||||||||||| | |||||| ||||||||| |||||| ||||||| || |||| |||||||||||||||| |||||| || |
|
|
| T |
11727105 |
ccactatttgtatagtggcatcaaaagttcagtcctcataatatcatcaattcatcaaattaacaagaatacatttaatctaattttatcctaccttatt |
11727204 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||| ||||||||||||||||||||||| |||||| |||| |||||| ||||||||||| || || ||||||||||| ||| |
|
|
| T |
11727205 |
ttaagtgtaacaccccacaaaatgtaacacttaagactatcacatgatatcaacaactttgtttgaatgttaaagatgccaacgataaaatagtatatgt |
11727304 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
11727305 |
aagtctaagatgttgcaagcattactaga |
11727333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 38644059 - 38644287
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||| | || ||||||||||||| | |||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
38644059 |
ccactgtttgtctagtggcatcaaaagttcagtctccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgtt |
38644158 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||| || ||||||||||||| |||||||||| || |||||| ||||||||||||| ||||||||| | | |||||||||||| ||| |
|
|
| T |
38644159 |
ttaagtgtaacactccataaagtgtaacactcaagactatcatatgatatcagcaactctgtttgcaagttaaagatgtcaatgataaaatagtacatgt |
38644258 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
38644259 |
aagtccaagatgttgcaagcattactaga |
38644287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 13307705 - 13307927
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||| |||||||| |||||||||||||||| | | |||||||| ||||| ||||||||||| || || ||||||||||||||||||||| ||| || || |
|
|
| T |
13307705 |
cactatttgtacagtgacatcaaaagttcagtccccatagtattatcaattcatcagattagcaagaatacacttaatctaattttatcctactttattt |
13307804 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || | || ||||||||||||| ||| |
|
|
| T |
13307805 |
taaatgtaacaccccacaaagtgtaacacttaagactatcacatgatatcaacaactctgtttgcatgttaaa-atgtcaacgataaaatagtacccgta |
13307903 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattac |
225 |
Q |
| |
|
||| ||| |||||||||||||||| |
|
|
| T |
13307904 |
agttcaagatgttgcaagcattac |
13307927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 34895048 - 34895269
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| | || ||||||||||||| | ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
34895048 |
ccactgtttgtaaagtggcatcaaaagttcagtcatcatactatcatcaattcatcagattaacaagactacacttaatctaattttatccaaccttgtt |
34895147 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||| |||||| |||||||| |||||||||||||||||| || |||||||||||||||||||| || || | |||||||||| ||| |
|
|
| T |
34895148 |
tcaagtgtaacaccccacaaaatgtaacac-----actatcacataatatcatcaaatctgtttgcatgttaaagatgccaacgaaaaaatagtacatgt |
34895242 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||| ||| |||||||||||||||||| |
|
|
| T |
34895243 |
aagttcaagatgttgcaagcattacta |
34895269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 44869578 - 44869806
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaa-ttttatcttaccttgt |
99 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||||||||| | |||||||||||||| ||||||| |||||||| |
|
|
| T |
44869578 |
ccactgtttgcacaatgacatcaaaagttcaatcgtcatagtatcatcaatttatcagattaacaataatacacttaatctaatttttatcctaccttgt |
44869677 |
T |
 |
| Q |
100 |
tataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
| |||| || || ||||||||||||||||||||||||||| || |||||| |||| ||||| |||||||||||| | || ||||||||||||| |
|
|
| T |
44869678 |
tttaagtgt-tgtccccacaaagtgtaacacttaagactatcaaatgatatcagcaactttgtttccatgttaaagatgtcaacgataaaatagtaccga |
44869776 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||| || ||||||||||||||||| |
|
|
| T |
44869777 |
taagtccaagatattgcaagcattactaga |
44869806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 465923 - 466141
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || |||||||| |||| | | | |||||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||| |
|
|
| T |
465923 |
ccactgtttgtacagtggcatcaaaaattcagtccccttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcttacattgtt |
466022 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||||| || | |||||||| ||||||| |
|
|
| T |
466023 |
ttaagtgtaacaccccacaaagtgtaacac---------tcacat-atatcagcaactctgtttgcatgttaaagatgccaatgataaaataatacctgt |
466112 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
466113 |
aagtctaagatgttgcaagcattactaga |
466141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 1150214 - 1150090
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
1150214 |
ccactgtttgtacaacgacatcaaaagttcagtcatcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcctaccttgtt |
1150115 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgt |
125 |
Q |
| |
|
|||||||||||||| |||||||||| |
|
|
| T |
1150114 |
ataagcgtaacaccccacaaagtgt |
1150090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 37 - 204
Target Start/End: Complemental strand, 41911061 - 41910895
Alignment:
| Q |
37 |
catagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaaga |
136 |
Q |
| |
|
|||||||||||||| |||||||||||||| || |||| |||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||| | |
|
|
| T |
41911061 |
catagtatcatcaattcatcagattaacaagaatacatttaatctaattttatcctaccttgttttaagtgtaacaccccacaaagtgtaacacttaata |
41910962 |
T |
 |
| Q |
137 |
ctatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||| | | || |||||||| ||||||||||| |
|
|
| T |
41910961 |
ctatcacatgatatcaccaactctgtttgcatgttaaaga-tgcaacgataaaatattacctgtaagt |
41910895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 43025783 - 43025959
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| ||||||||||| || ||||||||| ||| ||| ||||||||| |||||||| ||| | || |||| |||||||||||||||| |||||| || |
|
|
| T |
43025783 |
ccactctttgtacaatggtattaaaagttcagttcatataatatcatcaattcatcagactaagaagaatacatttaatctaattttatcctaccttatt |
43025882 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagat |
177 |
Q |
| |
|
||| |||||||| |||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
43025883 |
ttaactgtaacaccccacaaaatgtaacacttaaaactatcacataatatcatcaactctgattgcatgttaaagat |
43025959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 1149910 - 1149801
Alignment:
| Q |
116 |
cacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttg |
215 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||| || |||||||||||| |||||||| || |||||| |
|
|
| T |
1149910 |
cacaaagtgtaacacttaagac----acataatatcatcaactttgtttgcatgttaaagattccaacgataaaatagtacttgtaagtctaagatgttg |
1149815 |
T |
 |
| Q |
216 |
caagcattactaga |
229 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
1149814 |
caagcattactaga |
1149801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 41362596 - 41362707
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||| | |||||||||||||||| |||||||||||||||| |||||||||||||| ||||| |||| || |||||||||| ||||||||| |
|
|
| T |
41362596 |
ccactatttgtatagtgacatcaaaagttcagacctcatagtatcatcaattcatcagattaacaagactaaacttgatataattttatcataccttgtt |
41362695 |
T |
 |
| Q |
101 |
ataagcgtaaca |
112 |
Q |
| |
|
|||| |||||| |
|
|
| T |
41362696 |
ttaagtgtaaca |
41362707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34952140 - 34952028
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | | |||||||||||| |||||| ||||| | || ||||||||||||||||||||| ||| ||||| |
|
|
| T |
34952140 |
ccactgtttgtacagtgacatcaaaagttcagtccctttagtatcatcaattcatcaaattaataagaatacacttaatctaattttatcctactttgtt |
34952041 |
T |
 |
| Q |
101 |
ataagcgtaacac |
113 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
34952040 |
ttaagtgtaacac |
34952028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 35859160 - 35859243
Alignment:
| Q |
146 |
aatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| || |||||||||||||||||||| || || |||||||||||| ||||||| | | |||||||||||||||||||| |
|
|
| T |
35859160 |
aatatcatcaaatctgtttgcatgttaaagatgccaacgataaaatagtacttgtaagttcgagatgttgcaagcattactaga |
35859243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 12587812 - 12587891
Alignment:
| Q |
150 |
tcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| |||||| |||||||||||||||| | || ||||||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
12587812 |
tcatcaactctatttgcatgttaaagatgtcaacgataaaatagtacctgtaagtcaaagattttgcaagcattactaga |
12587891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 70 - 229
Target Start/End: Original strand, 18259233 - 18259388
Alignment:
| Q |
70 |
tacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatg |
169 |
Q |
| |
|
|||| ||||| |||||||||| |||||| || |||| |||||| | ||||||||||||||| |||| ||||| |||||| || | |||||||| |
|
|
| T |
18259233 |
tacatttaatttaattttatcataccttattttaagtgtaacatcccacaaagtgtaacacctaag----tcacaagatatcagcaatttaatttgcatg |
18259328 |
T |
 |
| Q |
170 |
ttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || | || |||||||||||| |||||||| || |||||||||||||||||||| |
|
|
| T |
18259329 |
ttaaaaatgtcaacgataaaatagtacatgtaagtctaagatgttgcaagcattactaga |
18259388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 24823394 - 24823275
Alignment:
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||||| |||||||| ||| ||| |||| |||||||| |||||| ||||||||| |||||| || || |||||||||||| |||| |
|
|
| T |
24823394 |
taagtgtaacaccccacaaagtataatactcaagattatcacatgatatcaacaactctgtt--------aaagatgccaacgataaaatagtacatgta |
24823303 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
24823302 |
agtccaagatgttgcaagcattactaga |
24823275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 7998478 - 7998555
Alignment:
| Q |
120 |
aagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacc |
197 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||||||||| || |||||||| || || ||||||||||||| |
|
|
| T |
7998478 |
aagtgtaacacttaatactatcacataatatcaacaactctgtttctatattaaagatgccaacgataaaatagtacc |
7998555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 7998411 - 7998488
Alignment:
| Q |
37 |
catagtatcatcaactcatcagattaacacgactacacttaatctaa-ttttatcttaccttgttataagcgtaacac |
113 |
Q |
| |
|
|||| ||||||||| ||||||||||||| || |||||||||||||| ||||||| ||||||||| |||| ||||||| |
|
|
| T |
7998411 |
cataatatcatcaatacatcagattaacaagaatacacttaatctaatttttatcctaccttgttttaagtgtaacac |
7998488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 34952012 - 34951948
Alignment:
| Q |
155 |
aactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaag |
219 |
Q |
| |
|
||||||||||||||||||||||| | || |||||||||||| |||||||| || |||||||||| |
|
|
| T |
34952012 |
aactctgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtctaagatgttgcaag |
34951948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 33198067 - 33198111
Alignment:
| Q |
185 |
ataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||| |||||| |
|
|
| T |
33198067 |
ataaaatagtacatgtaagtctaaaatgttgcaagcatcactaga |
33198111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 34463704 - 34463778
Alignment:
| Q |
150 |
tcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||| |||| |||||||||||||||||| | || |||||||| ||||| ||||||| |||||||||||||||||| |
|
|
| T |
34463704 |
tcatcaactttgtttgcatgttaaagatgtcaacgataaaataatacctataagtcc---atgttgcaagcattacta |
34463778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 183; Significance: 8e-99; HSPs: 53)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 25184197 - 25184423
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
25184197 |
actgtttgtacaatgacatccaaagttcaatcttcatagtatcatcaactcatcagattaacaagactacacttgatctaattttatcctaccttgttat |
25184296 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
25184297 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatattatcaactctgtttgcatgttaaaaattccgacaataaaatagtacatgtaa |
25184396 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
25184397 |
gtccaagatgttgcaagcattactaga |
25184423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 879673 - 879449
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
879673 |
tgtttgtacaatgacatcaaaagtttaatcttcatagtatcatcaactcatcagattaacaagactacacataatctaattttatcctaccttgttataa |
879574 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
879573 |
gcgtaacacctcacaaagtgtaacatttaagactatcacataatatcatcaactttgtttgcatgttaaagattctgacaataaaatagtacctgtaagt |
879474 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
879473 |
ccaagatgttgcaagcattactaga |
879449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 37663870 - 37663642
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| | |
|
|
| T |
37663870 |
ccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgct |
37663771 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| || |||||||||||||||| |
|
|
| T |
37663770 |
ataagcgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaacgttgttcgcatgttaaagattccaacgataaaatagtacctgt |
37663671 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
37663670 |
aagtccaagatgttgcaagcattactaga |
37663642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 50697329 - 50697552
Alignment:
| Q |
6 |
gtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
50697329 |
gtttgtacaatgacatcaaaagttcaattctc-tagtatcatcaattcatcagattaacaagactacacttaatataattttatcctaccttgttataag |
50697427 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgc-atgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||||||||||||||||| | |
|
|
| T |
50697428 |
cgtaacaccacacaaagtgcaacacttaagactatcacataatatcatcaactctgtttgcaatgttaaagattccaacgataaaatagtacctgtaatt |
50697527 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| |||||| ||||||||||||| |
|
|
| T |
50697528 |
ccaagatgttgtaagcattactaga |
50697552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 55478016 - 55477792
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| || |||||||||| |
|
|
| T |
55478016 |
tgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaacttgttataa |
55477917 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||| | ||||| |
|
|
| T |
55477916 |
gtgtaacaccccacaacgtgtaacactgaagactatcacataatatcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatttaagt |
55477817 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
55477816 |
ccaagatgttgcaagcattactaga |
55477792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 19089582 - 19089354
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| | |
|
|
| T |
19089582 |
ccactgtttgtataatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgct |
19089483 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| | || |||||||||||||||| |
|
|
| T |
19089482 |
atatgcgtaacaccctacaaagtgtaacacttaagactatcacataatatcatcaacgttgttcgcatgttaaagatttcaacgataaaatagtacctgt |
19089383 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
19089382 |
aagtccaagatgttgcaagcattactaga |
19089354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 19440777 - 19440549
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| | |||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
19440777 |
ccaccgtttgtacaatggcatcaaaagttcagtcctcataatatcatcaattcatcagattaacaagactacacttaatctaattttatcttagcttgtt |
19440678 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||||||| ||||| ||||||| |||||| ||| |||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||| |
|
|
| T |
19440677 |
ataagcgtaacaccccacaacgtgtaacccttaagtttataacataatatcatcaactctgtttgcatgttaaagattccaatgataaaatagtacatgt |
19440578 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
19440577 |
aagtccaagatgttgcaagcattactaga |
19440549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 42199817 - 42200040
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagc |
106 |
Q |
| |
|
|||||| |||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||||| ||||| |
|
|
| T |
42199817 |
tttgtagaatgacataaaaagttcagccctcatagtatcatcaattcatcagattaacaagactacacttaatataattttatcataccttgttctaagc |
42199916 |
T |
 |
| Q |
107 |
gtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacc-tgtaagtc |
205 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||| |||| |||||||| |
|
|
| T |
42199917 |
ataacaccctacaaagtgtaacacttaagactatcacataatatcataaactctatttgcatgttaaagattccaacgataaaataataccttgtaagtc |
42200016 |
T |
 |
| Q |
206 |
caaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
42200017 |
caagatgttgcaagcattactaga |
42200040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 17173372 - 17173600
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||| | || ||||||||||||||||||||| ||| ||||| |
|
|
| T |
17173372 |
ccactgtttgtacaatgacatcaaaagttcaatctccatagtatcattaattcatcagactaagaagaatacacttaatctaattttatcctacattgtt |
17173471 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
17173472 |
ttaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgt |
17173571 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || ||||||||||||| |||||| |
|
|
| T |
17173572 |
aagtctaagatgttgcaagcatcactaga |
17173600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 35021164 - 35020936
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || | ||||||||| | ||| |||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
35021164 |
ccactgtttgtacattggcgtcaaaagtttcgtcctcgtagtatcatcaattcattagattaacaaaactacacttaatctaattttatcctaccttgtt |
35021065 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
35021064 |
ttaagcgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagattccaacgataaaatagtatctgt |
35020965 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| || |||||| |||||||||| |
|
|
| T |
35020964 |
aagtccaagatattgcaaacattactaga |
35020936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 32912703 - 32912481
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagc |
106 |
Q |
| |
|
|||||| ||||| |||||||||||| |||||| ||||||||| | ||||| |||||| ||||||||||||| |||||||||| ||||||||| ||||| |
|
|
| T |
32912703 |
tttgtagaatgatatcaaaagttcagcactcataatatcatcaatttatcaggttaacaagactacacttaatataattttatcataccttgttctaagc |
32912604 |
T |
 |
| Q |
107 |
gtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc |
206 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||| | || |||||||||||||||||||||| |
|
|
| T |
32912603 |
gtaacaccctacaaagtgtaacacttaagactatcacataatatcatcaactctatttgtatgttaaagatttcaacgataaaatagtacctgtaagtcc |
32912504 |
T |
 |
| Q |
207 |
aaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
32912503 |
aagatgttgcaagcattactaga |
32912481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 17167795 - 17168023
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattct-catagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||||||||| || |||||||| ||| | || ||||||||||||||||||||| ||| |||| |
|
|
| T |
17167795 |
ccactgtttgtacaatgacatcaaaagttc-attctccatagtatcattaattcatcagactaagaagaatacacttaatctaattttatcctacattgt |
17167893 |
T |
 |
| Q |
100 |
tataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
| |||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| || || |||||||||||| || |
|
|
| T |
17167894 |
tttaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctatttgcatgttaaagatgccaacgataaaatagtacatg |
17167993 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| || ||||||||||||| |||||| |
|
|
| T |
17167994 |
taagtctaagatgttgcaagcatcactaga |
17168023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 28003115 - 28002887
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | ||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
28003115 |
ccactgtttgtacagtgacatcaaaagttcagtcatcatagtatcatcaattcatcggattaacaagactgcacttaatctaattttatcctaccttgtt |
28003016 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| || |||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| | || |||||||||||| ||| |
|
|
| T |
28003015 |
ttaagtgtaacaccccagaaagtgtaacacttaaaactatcacataatatcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgt |
28002916 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||| | |||||||||| |
|
|
| T |
28002915 |
aagtccaagatgttgctaacattactaga |
28002887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 33341481 - 33341708
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||| | | |||||||||||||| |||||||||||||| || || ||||||| |||||||||| ||||||||| |
|
|
| T |
33341481 |
ccactgtttgtacagtggcatcaaaagttcagtcc-catagtatcatcaattcatcagattaacaagaatatacttaatataattttatcctaccttgtt |
33341579 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | || |||||||||||| ||| |
|
|
| T |
33341580 |
ttaagtgtaacacctcacaaagtgtaacacttaagactatcacatgatatcagcaactctgtttgcatgttaaagatgtcaacgataaaatagtacatgt |
33341679 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |
|
|
| T |
33341680 |
aagtccaagatgttgtaagcattactaga |
33341708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 35 - 229
Target Start/End: Original strand, 1815417 - 1815611
Alignment:
| Q |
35 |
ctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaa |
134 |
Q |
| |
|
|||||||||||||||| |||||| ||||||| ||||||| ||| |||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||| |
|
|
| T |
1815417 |
ctcatagtatcatcaattcatcatattaacaagactacatttactctaattttatcctaccttgttttaagggtaacaccccacaaagtgtaacacttaa |
1815516 |
T |
 |
| Q |
135 |
gactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||| |||||||||| |
|
|
| T |
1815517 |
gactatcacataatatcatcaactctatttgcatgttaaagattccaacgataaaatagtacctgtaaatccaagatgttgcaaacattactaga |
1815611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 6864123 - 6864345
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagc |
106 |
Q |
| |
|
|||||||||| |||||||||| || | |||||||||||||||| | |||||||||||| ||||||| ||||| |||||||||| ||||||||||||||| |
|
|
| T |
6864123 |
tttgtacaatagcatcaaaagtccagtcctcatagtatcatcaatttatcagattaacaagactacatttaatttaattttatcataccttgttataagc |
6864222 |
T |
 |
| Q |
107 |
gtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc |
206 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||| | || |||||||| || ||||||| | |
|
|
| T |
6864223 |
gtaacaccccacaaagtgtaatacttaagactatcacataatatcatcaactttgtttgcatgttaaagattacaacgataaaataatatttgtaagttc |
6864322 |
T |
 |
| Q |
207 |
aaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
6864323 |
aagatgttgcaagcattactaga |
6864345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 55241233 - 55241006
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||| | | |||||||||||||| | ||||||| || | || ||||||||||||||||||||| ||||||||| |
|
|
| T |
55241233 |
ccactgtttgtacagtggcatcaaaagttcagtccccatagtatcatcaatttatcagat-aagaagaatacacttaatctaattttatcataccttgtt |
55241135 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
55241134 |
ttaagtgtaacacctcacaaagtgtaacacttaagactatcacatgatgtcagcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgt |
55241035 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||| |||||||||| |
|
|
| T |
55241034 |
aagtccaagatgttgcaaacattactaga |
55241006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 5048093 - 5047867
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||||||||||| |||| |||||||||||| ||| |||||||||||||| |||| ||||||||| |||| || |||||||||||||||| ||||||||| |
|
|
| T |
5048093 |
cactgtttgtacgatgatatcaaaagttcagttcccatagtatcatcaattcatgagattaacaagactgcatttaatctaattttatcctaccttgttt |
5047994 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||| ||| | |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
5047993 |
taagtgtaatacc-cgcaaaatgtaacacttaagactatcacatgatatcataaactatgtttgcatgttaaagatgccaacaataaaatagtacatgta |
5047895 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||| |||||||| |
|
|
| T |
5047894 |
agtccaagatgttgcaagttttactaga |
5047867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 3042741 - 3042929
Alignment:
| Q |
41 |
gtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactat |
140 |
Q |
| |
|
|||||||||| |||||| ||||||| || |||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
3042741 |
gtatcatcaattcatcatattaacaagattacacttaatataattttatcataccttattataagcgtaacaccccacaaagtgtaacacttaagactat |
3042840 |
T |
 |
| Q |
141 |
cacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||| |||| ||||||| ||||||||||| | || |||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
3042841 |
cacataatatcatcaactttgtttgcttgttaaagatttcaacgataaaatagtacatgtaagtccaacatgttgcaagcattactaga |
3042929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 34361620 - 34361393
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| |||||||| ||||||||| |||||| ||||||||| ||||| | |||||| | |||||||||| |||||||||| ||||||||| |
|
|
| T |
34361620 |
ccactgtttgtagaatgacattaaaagttcagc-ctcataatatcatcaattcatccggttaacaaaattacacttaatataattttatcataccttgtt |
34361522 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||||| | |
|
|
| T |
34361521 |
ctaagcgtaacaccctacaaagtgtaacacttaaagctatcacataatatcatcaactctatttgcatgttaaagattccaacgataaaatagtacctat |
34361422 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
34361421 |
aagtccaagatgttgcaagcattactaga |
34361393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 23761155 - 23761381
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||| | |||||||||||||||| | | |||||||||||||| |||||||||||||| || |||||||||||||||||||||| |||||||| |
|
|
| T |
23761155 |
cactgtttgtatagtgacatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatct-accttgttt |
23761253 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| ||||||||||| ||||||| ||| ||||||||||| ||| |||||| ||||||||||||| ||||||||| || || ||||||| |||||| || |
|
|
| T |
23761254 |
taagtgtaacacctcataaagtgtcacatttaagactatcgcatgatatcagcaactctgtttgcacgttaaagataccaacgataaaattgtacctata |
23761353 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
23761354 |
agtccaagatgttgcaagcattactaga |
23761381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 36493813 - 36493593
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| |||||||||||||||| | | |||||||||||||| |||| | ||||||| |||||||||||||||||||||||| ||| ||||| ||| |
|
|
| T |
36493813 |
tgtttgtacagtgacatcaaaagttcagtccccatagtatcatcaattcattaaattaacaagactacacttaatctaattttatcatacattgttttaa |
36493714 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||| || |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || || ||||||||||| |||||||| |
|
|
| T |
36493713 |
gtgtaa-actccacaaagtgtaacacttaagactaccacataatatcatcaactctgtttgcatgttaaagatgccaacgataaaatagtatctgtaagt |
36493615 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattact |
226 |
Q |
| |
|
| || || |||||||||||||| |
|
|
| T |
36493614 |
ctaagatattgcaagcattact |
36493593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 4934327 - 4934134
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| || ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
4934327 |
tgtttgtacactggcatcaaaagttcaatcctcatagtatcatcatttcatcagattaacaagactacacttaatctaattttattctaccttgttttaa |
4934228 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacct |
198 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| | || |||||||||||||| |
|
|
| T |
4934227 |
gtccaacacctcacaaagtgtaacacttaagactatcatataatatcatcaactatgtttgcatgttaaagatgacaacgataaaatagtacct |
4934134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 29584328 - 29584101
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
29584328 |
cactgtttgtacaatggcatcaaaagttcagtcttcatagtatcatcaattcatcagattaatgagaatacacttaatctaattttattctaccttgttt |
29584229 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| || ||||| || |||||| ||||||||||||||| ||| |||||| |||||| ||||||||||||||||| | |||||||||| |||| |||| |
|
|
| T |
29584228 |
taagtgttacaccccatgaagtgtcacacttaagactatcgcatgatatcagcaactctatttgcatgttaaagatttcaacaataaaatggtacatgta |
29584129 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
29584128 |
agtccaagatgttgcaagcattactaga |
29584101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 34948226 - 34947996
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| | || ||||||||||||| | |||||| ||||||||| |||||| ||||||| || ||||||||||||||||||||| || |||||| |
|
|
| T |
34948226 |
ccactgtttgtaaagtggcatcaaaagttcagtcctcataatatcatcaattcatcatattaacaagaatacacttaatctaattttatcctatcttgtt |
34948127 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaac--acttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacct |
198 |
Q |
| |
|
||| | |||||| ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||| || || |||||||| ||| | |
|
|
| T |
34948126 |
taaagtgcaacaccccacaaagtgtaacgtacttaagactatcacatgatatcaacaactctgtttgcatgttaaagatgccaacgataaaataatacat |
34948027 |
T |
 |
| Q |
199 |
gtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |
|
|
| T |
34948026 |
gtaagtccaagatgttgcaagcattactaga |
34947996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 47253834 - 47254050
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||| |||| |||||||||||||||| | ||||||||||||| |||||||||| || |||||||||| |||||||||| ||||||||| ||| |
|
|
| T |
47253834 |
tgtttatacagtgacatcaaaagttcagtcctcatagtatcat--------cagattaacaagaatacacttaatttaattttatcctaccttgttttaa |
47253925 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||||||||||||| || |||| |
|
|
| T |
47253926 |
gtgtaacaccccacaaagtgtaacacttaagactatcacatgatatcagcaactctgtttgcatgttaaagatgccaacaataaaatagtacatgcaagt |
47254025 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
| || |||||||||||||||||||| |
|
|
| T |
47254026 |
ctaagatgttgcaagcattactaga |
47254050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 3 - 223
Target Start/End: Complemental strand, 25701184 - 25700963
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
|||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||| | |
|
|
| T |
25701184 |
actgtttgtacagtgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaggactacactaaatctaattttatcctaccttgtttt |
25701085 |
T |
 |
| Q |
103 |
aagcgtaaca-cctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
||| |||||| || ||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||| | || ||||||||||| | ||| |
|
|
| T |
25701084 |
aagtgtaacatccccacaaagtgtaacacttaagattatcacataacatcatcaactttgtttgcatgttaaagaagtcaacgataaaatagtatccgta |
25700985 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcatt |
223 |
Q |
| |
|
| || || || ||||||||||| |
|
|
| T |
25700984 |
aatctaagattttgcaagcatt |
25700963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 38011936 - 38012164
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||| || ||||||||||||| | | |||| ||| ||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||| |
|
|
| T |
38011936 |
ccactgtttgtacggtgccatcaaaagttcagtccccataatattatcaattcatcagattaacaagactacacttaatttaattttattataccttgtt |
38012035 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| | || |||||||||| |||||||||||||||||||||||| |||| |||||||| |||||| || || ||||||||||||||| ||| |
|
|
| T |
38012036 |
ttaagtgtaacatcccagaaagtgtaacgcttaagactatcacataatatcatcaactatgtttgcacgttaaaaatgccaacaataaaatagtacatgt |
38012135 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||| ||||||||| |
|
|
| T |
38012136 |
aagtccaagatgttgcaaatattactaga |
38012164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 27396700 - 27396926
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| || |||||||||| ||||||||| ||||||||| | |
|
|
| T |
27396700 |
actgtttgtacaatgacatcaaaagtttcgtcctcatagtatcatcaattcatcagattaacaagaatacacttaatttaattttattctaccttgtttt |
27396799 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| |||||| | || ||||||| ||||||||||| ||| ||| |||||| ||| ||||||||||||||||||| | || ||||| | |||||| ||| |
|
|
| T |
27396800 |
aagtgtaacatcccataaagtgtcacacttaagaccatcgcatgatatcagcaacgctgtttgcatgttaaagatgtcaacgataaagtggtacctataa |
27396899 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
27396900 |
gtccaaaatgttgcaagcattactaga |
27396926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 7703599 - 7703819
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||| | | ||||||||||| |||||||||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
7703599 |
ccactgtttgtacggtgacatcaaaagttcagtccccatagtatcat--------cagattaacaagaatacacttaatctaattttattctaccttgtt |
7703690 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||| || || |||||||||||||||| |
|
|
| T |
7703691 |
ttaagtgtaacactccacaaagtgtcacacttaagactatcacatgatatcagcaactctgtttgcacgttaaagatgccaacgataaaatagtacctgt |
7703790 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
7703791 |
aagtcgaagatgttgcaagcattactaga |
7703819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 46888286 - 46888059
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||||| | ||||||||||||| | | |||| |||| | || |||||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
46888286 |
ccactatttgtacagcggcatcaaaagttcagtccccatactatcgttaattcatcagattaacaaaactacacttaatctaattttatcctaccttgtt |
46888187 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||| |||||| |||||||||| ||||||||||||||||||| || || ||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
46888186 |
tcaagtgtaacaccccacaaaacgtaacactta-gactatcacataatatcatcaaatcggtttgcatgttaaagatgccaacgataaaatagtacctgt |
46888088 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| ||||| ||||| |||||||||||||| |
|
|
| T |
46888087 |
aaatccaagatgttacaagcattactaga |
46888059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 9139327 - 9139539
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
9139327 |
ccaccgtttgtacagtgacataaaaagttcaatccccatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcctaccttgtt |
9139426 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| || || |||| |||||| ||| |
|
|
| T |
9139427 |
ttaactgtaacaccctacaaagtgtaacacttaag----------------ataaactctgtttgcatgttaaagatgccaacgataacgtagtacatgt |
9139510 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
9139511 |
aagtccaagatgttgcaagcattactaga |
9139539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 34 - 229
Target Start/End: Original strand, 32579561 - 32579756
Alignment:
| Q |
34 |
tctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacactta |
133 |
Q |
| |
|
||||||||||| |||| |||||||||||||| |||| |||||||||||||||||| ||||||||| |||| |||| |||||| |||||||||| |||| |
|
|
| T |
32579561 |
tctcatagtattatcagttcatcagattaacatgactgtacttaatctaattttatcctaccttgttttaagtgtaagacctcagaaagtgtaactctta |
32579660 |
T |
 |
| Q |
134 |
agactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||| |||| ||||||||||||||| || | || |||||||||||| ||||||||||| ||||||||| |||||||||| |
|
|
| T |
32579661 |
agactatcttataatatcatcaactatgtttgcatgttaaaaatgtcaacgataaaatagtacatgtaagtccaagatgttgcaaacattactaga |
32579756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 17272084 - 17272274
Alignment:
| Q |
39 |
tagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagact |
138 |
Q |
| |
|
|||||||||||| |||||||||||| || |||||||||||||||||||| ||||||||| |||| |||||||| || |||||| |||||||||||| |
|
|
| T |
17272084 |
tagtatcatcaattcatcagattaatgagaatacacttaatctaattttattctaccttgttttaagtgtaacaccccatgaagtgtcacacttaagact |
17272183 |
T |
 |
| Q |
139 |
atcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| ||| |||||| |||||| ||||||| ||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
17272184 |
atcgcatgatatcagcaactctatttgcatattaaagatttcaacaataaaatagtacatgtaagtccaagatgttgcaagcattactaga |
17272274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 49376049 - 49376275
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||| ||||||| || ||||||||||||| | ||||||||||||||| |||||||||||||| || ||| ||| |||||||||||| | ||||| | |
|
|
| T |
49376049 |
ccactgcttgtacagtggcatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagattacgcttgatctaattttattctgccttgat |
49376148 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||| ||||| ||||||||||||||| |||||||||||||||| |||| |||||| ||||||||||| | || |||||||||||| ||| |
|
|
| T |
49376149 |
ttaagttatacaccccacaatgtgtaacacttaagattatcacataatatcatcaactttgtttggatgttaaagatgtcaacgataaaatagtacatgt |
49376248 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||||||| | |||| ||||||||||| |
|
|
| T |
49376249 |
aagtccaagaagttgaaagcattacta |
49376275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 37775751 - 37775968
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || |||||||||||| || |||||||||||| |||||||||||||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
37775751 |
ccactgtttgtacagtggcatcaaaagttcccccct--tagtatcatcaattcatcagattaacaagaatacacttaatctaattttattctaccttgtt |
37775848 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||| |||||| |||||| |||| |||||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
37775849 |
ttaagtgtaacaccccacaaagtgtaacac---------tcacatgatatcagcaactttgtttgcatgttaaagataccaacgataaaatagtacatgt |
37775939 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
37775940 |
aagtctaagatgttgcaagcattactaga |
37775968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 50764812 - 50765030
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||||||||| |||| ||||||||| || |||| |||||||||||||||| ||| |
|
|
| T |
50764812 |
ccactgtttgtacggtgacatcaaaagttcaatcctcatagtatcatcaattcattagattaacaagaatacatttaatctaattttatcctac------ |
50764905 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
| |||||||| ||||||||| |||||| || | |||||||| |||||| |||| |||||||| ||||||||| | || |||||||||||| ||| |
|
|
| T |
50764906 |
----gtgtaacaccccacaaagtgaaacactcaatattatcacatgatatcagcaactatgtttgcaagttaaagatgtcaacgataaaatagtacatgt |
50765001 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
50765002 |
aagtctaagatgttgcaagcattactaga |
50765030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 32592175 - 32592392
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| | |||||||||||||||| | | | |||||||||||| |||||||||||||| || |||| ||||| |||||||||| ||||||||| |
|
|
| T |
32592175 |
ccactgtttgtatagtgacatcaaaagttcagtccccttagtatcatcaattcatcagattaacaagaatacatttaatttaattttatcctaccttgtt |
32592274 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||| ||| || || ||| |||| |||||||||||||||||| | || |||||||||||||||| |
|
|
| T |
32592275 |
ttaagtgtaacaccccacaaagtgtaacac---------tcatatgatttcagcaactttgtttgcatgttaaagatgtctacgataaaatagtacctgt |
32592365 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||| ||| |||||| ||||||||||| |
|
|
| T |
32592366 |
aagttcaagatgttgaaagcattacta |
32592392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #39
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 67 - 229
Target Start/End: Complemental strand, 46884171 - 46884015
Alignment:
| Q |
67 |
gactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgc |
166 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||||| | ||||||| |
|
|
| T |
46884171 |
gactacacttaatctaattttatcatatcttgttataagc-taacatctcacaaaatgtaacacttaa-actatcacataatatcataaattttgtttgc |
46884074 |
T |
 |
| Q |
167 |
atgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||| | ||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
46884073 |
atgttaaaaattccaaagataaaatagta--tgtaagtcc--gatgttgcaagcattactaga |
46884015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #40
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 37287816 - 37288038
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttaccttgt |
99 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| |||||| |||||| | |||||||| || |||||||||||||||||| | | ||| |||| |
|
|
| T |
37287816 |
ccactgtttgtacagtggcatcaaaagttcaatcctcataatatcataa--------gattaacaagaatacacttaatctaatttttaacctactttgt |
37287907 |
T |
 |
| Q |
100 |
tataagcgtaacacctc-acaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacct |
198 |
Q |
| |
|
| |||| ||||| || | ||||| ||||||||||||||||| ||||| |||||| |||| |||||||||||| ||||| || || |||||||||||| | |
|
|
| T |
37287908 |
tttaagtgtaacgcccccacaaaatgtaacacttaagactagcacatgatatcagcaactttgtttgcatgttgaagatgccaacgataaaatagtacat |
37288007 |
T |
 |
| Q |
199 |
gtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||| ||||||||||||||| |||| |
|
|
| T |
37288008 |
gtaagtccaagatgttgcaagcattattaga |
37288038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #41
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 196
Target Start/End: Complemental strand, 35025674 - 35025530
Alignment:
| Q |
52 |
tcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatc |
151 |
Q |
| |
|
|||||||||||||| |||| || ||||| |||||||||| || |||||| |||| || ||||| || ||||||||||||||||||||||| ||||||||| |
|
|
| T |
35025674 |
tcatcagattaacaagactgcatttaatataattttatcctatcttgttttaagtgtcacaccccagaaagtgtaacacttaagactatcgcataatatc |
35025575 |
T |
 |
| Q |
152 |
ataaactctgtttgcatgttaaagattccgacaataaaatagtac |
196 |
Q |
| |
|
|| |||| |||||||||||||||||| || || |||||||||||| |
|
|
| T |
35025574 |
atcaactatgtttgcatgttaaagatgccaacgataaaatagtac |
35025530 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #42
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 33816644 - 33816417
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctca- |
117 |
Q |
| |
|
||||||||||||| | |||||||||||||| | |||||||||||| || | ||||||||||||||||||| ||||||||| |||| |||||||| || |
|
|
| T |
33816644 |
catcaaaagttcagtctccatagtatcatcaatttatcagattaacaagattgcacttaatctaattttatcctaccttgttttaagtgtaacaccccag |
33816545 |
T |
 |
| Q |
118 |
----------------caaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| | || |||||||||| | |||| |
|
|
| T |
33816544 |
aaagtgtaataccccacaaagtgtaacacttaagactatcgcataatatcatcaactatgtttgcatgttaaagatgtcaacgataaaatagttcatgta |
33816445 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| ||||||||| |||||||||| |
|
|
| T |
33816444 |
agtccaagatgttgcaaacattactaga |
33816417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #43
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 30002752 - 30002542
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||||| |||||||||||||||| | || ||||||||||| |||||||| || ||||||||||||||||||||| |||||| || |
|
|
| T |
30002752 |
cactgtttgtacagtgacatcaaaagttcagtcttcttagtatcatca--------gattaacaagaatacacttaatctaattttatcctaccttattt |
30002661 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||||| | || |||||||||||| | || |
|
|
| T |
30002660 |
taagtgtaacaccccacaaagtgtaacac---------tcacatgatatcagcaactctgtttgcatgttaaagatgtcaacgataaaatagtacattta |
30002570 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| || |||||||||||||||||||| |
|
|
| T |
30002569 |
agtctaagatgttgcaagcattactaga |
30002542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #44
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 7152221 - 7152105
Alignment:
| Q |
113 |
cctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatg |
212 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||| ||||| |||||||||||||||||||| || | || |||||||||||||||||||||||| || |
|
|
| T |
7152221 |
cctcacaaagtataacacttaatactatcacataacatcatcaactctgtttgcatgttaaatatgtcaacgataaaatagtacctgtaagtccaagatt |
7152122 |
T |
 |
| Q |
213 |
ttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
7152121 |
ttgcaagcattattaga |
7152105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #45
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 54499368 - 54499193
Alignment:
| Q |
1 |
ccactgtttgtac-aatgacatcaaaagttcaattctc-atagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttacctt |
97 |
Q |
| |
|
|||| |||||||| |||||||||||||||||| | ||| ||||||||||||| |||||| ||||||| || || ||||||||||||||| ||| |||||| |
|
|
| T |
54499368 |
ccaccgtttgtactaatgacatcaaaagttcagt-ctctatagtatcatcaattcatcatattaacaagaatatacttaatctaatttttatcatacctt |
54499270 |
T |
 |
| Q |
98 |
gttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaa |
174 |
Q |
| |
|
||| |||| |||||||| |||||||||||| ||||||||||||||| |||| | |||||||||| ||||||||| |
|
|
| T |
54499269 |
gttttaagtgtaacaccctacaaagtgtaacttttaagactatcacatgatattagtaactctgtttccatgttaaa |
54499193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #46
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 4598074 - 4598292
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||| | | | ||| ||||||| |||||| ||||||| || |||||||||| |||||||||| | | ||||| |
|
|
| T |
4598074 |
ccactgtttgtacagtggcatcaaaagttcagtccccttagactcatcaattcatcatattaacaagaatacacttaatttaattttatcctgc-ttgtt |
4598172 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||| |||||| |||||| |||||||||| |||||||||||| || || |||||||| ||| | | |
|
|
| T |
4598173 |
ttaagtgtaacaccccacaaagtgtaacac---------tcacatgatatcagcaactctgttttcatgttaaagatgccaacgataaaataatacattt |
4598263 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| ||||| ||||||||||||||| |||| |
|
|
| T |
4598264 |
aaatccaagatgttgcaagcattattaga |
4598292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 26896285 - 26896397
Alignment:
| Q |
117 |
acaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc-aaaatgttg |
215 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| || || ||| ||||||||||||| ||| | || |||||||||||| ||||||||| ||||||||| |
|
|
| T |
26896285 |
acaaagtgtaacacttaagactatcgcataatatgatcaagtctatttgcatgttaaa-atttcaacgataaaatagtacttgtaagtccgaaaatgttg |
26896383 |
T |
 |
| Q |
216 |
caagcattactaga |
229 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
26896384 |
caaacattactaga |
26896397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 4205220 - 4205294
Alignment:
| Q |
155 |
aactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||||||| || || |||||||||||| ||||||||||| ||||||||||||| |||||| |
|
|
| T |
4205220 |
aactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaagcatcactaga |
4205294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 39400244 - 39400318
Alignment:
| Q |
155 |
aactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||||||| || || ||||||| |||||| ||||| ||| |||||||||||||||||||| |
|
|
| T |
39400244 |
aactctgtttgcatgttaaagatgccaacgataaaatggtacctttaagttcaagatgttgcaagcattactaga |
39400318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 56050171 - 56050234
Alignment:
| Q |
160 |
tgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcatt |
223 |
Q |
| |
|
||||||||||||||||| | | || |||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
56050171 |
tgtttgcatgttaaagacttcaacgataaaatagtacctgtaagtccaagatgttgcaagcatt |
56050234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 35025511 - 35025467
Alignment:
| Q |
185 |
ataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
35025511 |
ataaaatagtacatgtaagtccaagatgttgcaagcattactaga |
35025467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 39398049 - 39398115
Alignment:
| Q |
59 |
attaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgt |
125 |
Q |
| |
|
||||||| || ||||||||||||||||||||| | |||| || |||| |||||||| |||||||||| |
|
|
| T |
39398049 |
attaacaagaatacacttaatctaattttatcctgccttattttaagtgtaacaccccacaaagtgt |
39398115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 23431826 - 23431865
Alignment:
| Q |
190 |
atagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
23431826 |
atagtacctgtaagtccaagatgttgcaagcattagtaga |
23431865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 177; Significance: 3e-95; HSPs: 56)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 22974175 - 22973947
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| || |||||| |
|
|
| T |
22974175 |
ccactgtttgtacaataacatcaaaagttcaattctcatattatcatcaactcatcagaataacaagactacacttaatctaattttatcctatcttgtt |
22974076 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
22974075 |
ataagcgtaacacctcacaaaatgtaacacttaagactattacataatattatcaactctgtttgcatgttaaagatttcgacaataaaatagtacatgt |
22973976 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
22973975 |
aagtccaagatgttgcaagcattactaga |
22973947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 22980875 - 22981103
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||| | | |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
22980875 |
ccactgtttgagcaatgacatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgtt |
22980974 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||| |
|
|
| T |
22980975 |
ttaagtgtaacacctcacaaaatgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagatgccaacgataaaatagtatatgt |
22981074 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||| |||||||||| |
|
|
| T |
22981075 |
aagtccaagatgttgcaatcattactaga |
22981103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 7208951 - 7208729
Alignment:
| Q |
6 |
gtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
||||||||| |||||||||||||||| | ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
7208951 |
gtttgtacattgacatcaaaagttcagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttataaa |
7208853 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| || |||||||||||| ||||||| |
|
|
| T |
7208852 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatattttcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagtt |
7208753 |
T |
 |
| Q |
206 |
caaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| |||||||||| ||||||||| |
|
|
| T |
7208752 |
caagatgttgcaagtattactaga |
7208729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 31705699 - 31705477
Alignment:
| Q |
6 |
gtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
||||||||||||||||||||||| || | ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
31705699 |
gtttgtacaatgacatcaaaagtccagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatctaattttatcataccttgttataag |
31705601 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
||||||| |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| | |||||| |
|
|
| T |
31705600 |
cgtaacatctcacaaaatgtaacacttaagaccatcacataatatcatcaactctgtttgcatgttaaagattccaaagataaaatagtacatataagtc |
31705501 |
T |
 |
| Q |
206 |
caaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
31705500 |
caagatgttgcaagcattactaga |
31705477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 22255264 - 22255492
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| | || ||||| |
|
|
| T |
22255264 |
ccaccgtttgtacaatggcatcaaaagttcagttctcatattatcatcaattcatcagattaacaagactacacttaatctaattttagcctattttgtt |
22255363 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
22255364 |
ataagcgtaacaccacacaaagtgtaacacttaaaactattacataatatcatcaactatgtttgcatgttaaatattccaacgataaaatagtacctgt |
22255463 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||||| |||||||| |
|
|
| T |
22255464 |
aagtccaagatgttgcaagccttactaga |
22255492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 31786739 - 31786511
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| |||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| || |||||| |
|
|
| T |
31786739 |
ccactgtttgtacagtggcatcaaaagttcaatcctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcctatcttgtt |
31786640 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| || || |||||||||||||||| |
|
|
| T |
31786639 |
ttaagtgtaacaccctacaaagtgtaacacttaaaactatcacataatatcatcaactctgattgcatgttaaagatgccaacgataaaatagtacctgt |
31786540 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| ||||| |||||||||||||||||||| |
|
|
| T |
31786539 |
aaatccaagatgttgcaagcattactaga |
31786511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 699232 - 699460
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||| || |
|
|
| T |
699232 |
ccactgtttgtacagtgacatcaaaagttcagtcatcataatatcatcaattcatcagattaacaagactacacttaatctaattttatcataccttatt |
699331 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||| |||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| || || ||||||||||| |||| |
|
|
| T |
699332 |
ttaagtgtaacactccacaaagtgtaatacttaagactatcacataatatcatcaactatgtttgcatgttaaagatgccaacgataaaatagtatctgt |
699431 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
699432 |
aagtccaagatgttgcaagcattactaga |
699460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 5829988 - 5830202
Alignment:
| Q |
6 |
gtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
|||||||||||||||||||||||| | | |||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5829988 |
gtttgtacaatgacatcaaaagtttagtcctcatagtatcatcaa---------ttaacaagactacacttaatctcattttatcttaccttgttataag |
5830078 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||| |||||||| |
|
|
| T |
5830079 |
cgtaacaccccacaaagtgtaacacttaaaactatcacataatatcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagtc |
5830178 |
T |
 |
| Q |
206 |
caaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
5830179 |
caagatgttgcaagcattactaga |
5830202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 229
Target Start/End: Original strand, 12910446 - 12910665
Alignment:
| Q |
10 |
gtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgta |
109 |
Q |
| |
|
||||| |||||||||||||||| | ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| ||||||||| |||| ||| |
|
|
| T |
12910446 |
gtacagtgacatcaaaagttcagtcctcatagtatcgtcaattcatcagattaacatgactacacttaatctaattttatcctaccttgttttaagtgta |
12910545 |
T |
 |
| Q |
110 |
acacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaa |
209 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||| || |||||| |||| ||| ||||||||||| |
|
|
| T |
12910546 |
acaccccacaaagtgtaacacctaagactatcacataatatcatcaactctggttgtatgttaaagatgccaacaatacaataatacatgtaagtccaag |
12910645 |
T |
 |
| Q |
210 |
atgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
12910646 |
atgttgcaagcattactaga |
12910665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 27318580 - 27318385
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| |||||| || |
|
|
| T |
27318580 |
ccactgtttgtacaatgacatcaaaagtttagttctcacagtatcatcaattcatcatattaacaagactacacttaatctaattttatcctaccttatt |
27318481 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtac |
196 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | || |||||||||||| |
|
|
| T |
27318480 |
ttaagcgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagatttcaacgataaaatagtac |
27318385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 23116315 - 23116090
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || |||||||||||| || |||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||| |
|
|
| T |
23116315 |
ccactgtttgtacagtggaatcaaaagttcagtttacatagtatcatcaattcatcagattaacaatattacacttaatctaattttatcctaccttgtt |
23116216 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | || |||||||||||||||| |
|
|
| T |
23116215 |
tcaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaaatctgtttgcatgttaaagatgtcaacgataaaatagtacctgt |
23116116 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||||||| ||||||||||||||||| |
|
|
| T |
23116115 |
aagtccaagatgttgcaagcattact |
23116090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 38528325 - 38528102
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||| |||| |||||||||||||||| | |||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| || |
|
|
| T |
38528325 |
tgtttatacagtgacatcaaaagttcagt-ctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcttaccttgtttcaa |
38528227 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||||||||||| || ||| ||| |||||||||||| | || |||||||||||| ||||||| |
|
|
| T |
38528226 |
gtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaaatctatttacatgttaaagatatcaacgataaaatagtacttgtaagt |
38528127 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
38528126 |
ccaagatgttgcaagcattactaga |
38528102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 35504452 - 35504675
Alignment:
| Q |
6 |
gtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
||||||| ||||||||||||||||||| | ||||||||||||| |||||| ||||||| ||||||||||||| |||||||||| |||| | ||||||| |
|
|
| T |
35504452 |
gtttgtatgatgacatcaaaagttcaatcattatagtatcatcaattcatcatattaacaagactacacttaatataattttatcctaccatattataag |
35504551 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||| | || |||||||||||| |||||||| |
|
|
| T |
35504552 |
cgtaacaccccacaaagtgtaacacttaagactatcacataatattatcaaatctgtttgcatgttaaagatttcaacgataaaatagtacatgtaagtc |
35504651 |
T |
 |
| Q |
206 |
caaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| |||||||||| ||||||||| |
|
|
| T |
35504652 |
caagatgttgcaagtattactaga |
35504675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 14919620 - 14919431
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||||||| || |||||||||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| |
|
|
| T |
14919620 |
cactgtttatataatgacatcaaaagttcagtcctcatagtatcatcaactcatcatattaacaaaactacacttaatctaattttatcctaccttatta |
14919521 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaat |
191 |
Q |
| |
|
|||| ||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
14919520 |
taagtgtaacacctcacaaattgtaatacttaagactatcacataatatcatcaactctgtttgcatgttaaagattccaacaataaaat |
14919431 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 24886186 - 24886397
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| || |
|
|
| T |
24886186 |
ccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaactcatcatattaacaagactacacttaatctaattttatcctaccttatt |
24886285 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
24886286 |
ataag-----------------tgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagattccaacaataaaatagtacatgt |
24886368 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
24886369 |
aagtccaagatgttgcaagcattactaga |
24886397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 30969417 - 30969189
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| ||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||| ||||| |
|
|
| T |
30969417 |
ccactatttatacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctactttgtt |
30969318 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| | |||||||||||||| || | |
|
|
| T |
30969317 |
ttaagtgtaacacctcacaaagtgtaacacttaagactatcacatgatatcagcaactttgtttgcatgttaaagatgtcaacaataaaatagtatctat |
30969218 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| |
|
|
| T |
30969217 |
aagttcaagatgctgcaagtattactaga |
30969189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 43308745 - 43308525
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||| |||||||| ||||||||||||| | |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
43308745 |
ccactgttcgtacaatggcatcaaaagttcagtcctcatagtatcatcaactcatcagcttaacaaaactatacttaatctaattttatcttaccttgtt |
43308646 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43308645 |
ataagtgtaacaccctgaaaagtgtaacacttaagact--------atatcatcaactcttcttgcatgttaaagattccgacaataaaatagtacctgt |
43308554 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
43308553 |
aagtcgaagatgttgcaagcattactaga |
43308525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 15992633 - 15992405
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | ||||||||||||||| |||||||||||||| || ||||||| |||||||||||| ||||||| | |
|
|
| T |
15992633 |
ccactgtttgtacagtgacatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagaatacacttgatctaattttattctaccttgat |
15992534 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
| || | |||||| |||||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||| || || ||||||||||||| || |
|
|
| T |
15992533 |
ttgagtgcaacaccccacaaagtgtcacacttaagactatcgcatgatatcaggaactctgtttgcatgttaaagatgccaacgataaaatagtaccggt |
15992434 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
15992433 |
aagtccaagatgttgcaagcattactaga |
15992405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 17158123 - 17157896
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||| | | |||||||||| || |||||||||||||| ||||||||||| | ||||| ||||||||||| || |
|
|
| T |
17158123 |
ccaccgtttgtacaatgacatcaaaagttcg-tcattatagtatcattaattcatcagattaacaagactacacttagtataattgtatcttaccttatt |
17158025 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||| |||||||||||| || ||||||||||||||| |||||||| | || |||||||||||| | | |
|
|
| T |
17158024 |
ataagtgtaacaccccacaaagtgtaacacttaagaccatcacataatattatcaactctgtttgcatgataaagatttcaacgataaaatagtactttt |
17157925 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
17157924 |
aagtccaagatgttgcaagcattactaga |
17157896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 19119941 - 19120169
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | | |||||| ||||||| |||||||||||||| || || ||||| |||||||||||| ||||||||| |
|
|
| T |
19119941 |
ccactgtttgtacagtgacatcaaaagttcagtccccatagtgtcatcaattcatcagattaacaagaataaacttactctaattttatcctaccttgtt |
19120040 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| || || |||||||||||||| |
|
|
| T |
19120041 |
ttaagtataacaccccacaaagtgtaacacttaagactatcacatgatatcagcaactccgtttgcatgttaaagatgccaacgataaaatagtacctca |
19120140 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
19120141 |
aagtctaagatgttgcaagcattactaga |
19120169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 33908315 - 33908543
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||| || ||||||||||||| | |||||||||||||||| | ||||||||||| |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
33908315 |
ccactgtttgtacggtggcatcaaaagttcagtcctcatagtatcatcaattattcagattaacaagactgcacttaatctaattttatcataccttgtt |
33908414 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||| || ||||||||||||||||||||||| ||||||||| | |||| |||||| ||||||||||| || || |||||||||||| ||| |
|
|
| T |
33908415 |
ttaaatgtaacaccccagaaagtgtaacacttaagactatcgcataatatcgtcaactatgtttgtatgttaaagatgccaacgataaaatagtacatgt |
33908514 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
33908515 |
aagtccaagatgttgcaagcattactaga |
33908543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 27330388 - 27330614
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||||| ||||||||| | |
|
|
| T |
27330388 |
actgtttgtacaatggcatcaaaagttcagtcttcatagtatcatcaattcatcagattaatgagaatacacttaatctaattttattctaccttgtttt |
27330487 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| |||||||| || |||||| ||||||||||||||| ||| |||||| |||||| ||||||||||||||||| | |||||||||| |||| ||||| |
|
|
| T |
27330488 |
aagtgtaacaccccatgaagtgtcacacttaagactatcgcatgatatcagcaactctatttgcatgttaaagatttcaacaataaaatggtacatgtaa |
27330587 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
27330588 |
gtccaagatgttgcaagcattactaga |
27330614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 5837637 - 5837865
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| | |||||||||||||| |||||| ||||||| || ||||||||||||||||| ||| ||| ||||| |
|
|
| T |
5837637 |
ccactgtttgtacagtgacatcaaaatttcagtctccatagtatcatcaattcatcatattaacaagaatacacttaatctaatttaatcctacattgtt |
5837736 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||| ||| |||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||| | || | ||||||||||||| |
|
|
| T |
5837737 |
ttaagtgtaataccccacaaagtgtaacacttaagactatcacatgatatcagcaactctctttgcatgttaaagatgacaacgacaaaatagtacctgc |
5837836 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
5837837 |
aagtccaagatgttgcaagcattactaga |
5837865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 8741975 - 8741750
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||||||||||| ||||||||||||| | |||||||||||||| |||||| ||||||| || |||| ||||||||||||| || ||||||||| ||| |
|
|
| T |
8741975 |
tgtttgtacaatggcatcaaaagttcagtctccatagtatcatcaattcatcaaattaacaagaatacaattaatctaattttgtcataccttgttttaa |
8741876 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacat-aatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaag |
203 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||| | || |||||||||||| |||||| |
|
|
| T |
8741875 |
gtgtaacaccctacaaagtgtaacacttaagactatcacatgattatgagcaactctgtttgcatgttaaagatgtcaacgataaaatagtacatgtaag |
8741776 |
T |
 |
| Q |
204 |
tccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||| |||||| |
|
|
| T |
8741775 |
tccaaaatgttgcaagcatcactaga |
8741750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 35826572 - 35826351
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| |||||||||||||||| | ||||||||||||||| |||| ||||||||| || ||| ||||||||||||||| ||| ||||| ||| |
|
|
| T |
35826572 |
tgtttgtacagtgacatcaaaagttcagtcctcatagtatcatcagttcat-agattaacaataccacatttaatctaattttattctacattgttttaa |
35826474 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
||||||||| ||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||||||||||| | || |||||||||||| ||||||| |
|
|
| T |
35826473 |
gcgtaacactccacaaagtgtaacccttaagattatca--taatatcatcaactctgtttgcatgttaaagatttcaacgataaaatagtacatgtaagt |
35826376 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
35826375 |
ccaagatgttgcaagcattactaga |
35826351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 36866844 - 36867069
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | | ||||||||| ||| |||||||| ||||| || |||| |||||||||||||||| ||||||||| |
|
|
| T |
36866844 |
ccactgtttgtacaatggcatcaaaagttcagtcccgatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcctaccttgtt |
36866943 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||| | || |||||||| || ||| |
|
|
| T |
36866944 |
ttaagtgtaacaccccacaaagtgtaacacttaaaactatcacataatatcatcaactatgtttgtatgttaaagatgtcaacgataaaataatatttgt |
36867043 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||||||| ||||||||| ||||||| |
|
|
| T |
36867044 |
aagtccaagatgttgcaaacattact |
36867069 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 40133467 - 40133692
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| ||||||||||| ||||||||||||| | | |||| ||||| ||| |||||||| ||||| || |||| |||||||||||||||| ||||||||| |
|
|
| T |
40133467 |
ccactatttgtacaatggcatcaaaagttcagtccccataatatcaacaattcatcagactaacaagaatacatttaatctaattttatcctaccttgtt |
40133566 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||| | || |||||||| || ||| |
|
|
| T |
40133567 |
ttaagtgtaacaccccacaaagtgtaacacttaaaactatcacataatatcatcaactatgtttgtatgttaaagatgtcaacgataaaataatatttgt |
40133666 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||||||| ||||||||||||||||| |
|
|
| T |
40133667 |
aagtccaagatgttgcaagcattact |
40133692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 21088859 - 21088631
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | | |||||||||| ||| |||||| | ||||| || |||| ||||||||| |||||| ||||||||| |
|
|
| T |
21088859 |
ccactgtttgtacaatgacatcaaaagttcagtccccatagtatcaacaattcatcatactaacaagaatacatttaatctaactttatcctaccttgtt |
21088760 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| | ||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||||||||| || || |||||||| | |||| |
|
|
| T |
21088759 |
ttaagtgtaacatcccacaaagtgtaacacttaagattatcacataatatcatcaactatgtttgtatgttaaagatgccaacgataaaataacatctgt |
21088660 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| ||||| |||||| ||||||||||||| |
|
|
| T |
21088659 |
aaatccaagatgttgtaagcattactaga |
21088631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 23954864 - 23954709
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcac |
118 |
Q |
| |
|
||||||||||||| || |||||||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||| |
|
|
| T |
23954864 |
catcaaaagttcagtttccatagtatcatcaattcatcatattaacaagactacacttaatctaattttatcctaccttgttttaagtgtaacacctcac |
23954765 |
T |
 |
| Q |
119 |
aaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaa |
174 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
23954764 |
aaaatgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaa |
23954709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 36860505 - 36860732
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | | |||||||||| ||| |||||| | ||||| || |||| |||||||||||||||| |||||| || |
|
|
| T |
36860505 |
ccactgtttgtacaatgacatcaaaagttcagtccccatagtatcaacaattcatcatactaacaagagtacatttaatctaattttatcctaccttttt |
36860604 |
T |
 |
| Q |
101 |
at-aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
| ||| |||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||| | || |||||||| || || |
|
|
| T |
36860605 |
tttaagtgtaacaccccacaaagtgtaacacttaaaactatcacataatatcatcaactatgtttgtatgttaaagatgtcaacgataaaataatatttg |
36860704 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
||||||||| |||||||||||||||||| |
|
|
| T |
36860705 |
taagtccaagatgttgcaagcattacta |
36860732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 35511570 - 35511349
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| | |||||||||||||||| | ||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
35511570 |
ccactgtttgtaaagtgacatcaaaagttcagtcatcatactatcaccaattcatcagattaacaagactacacttaatctaattttatccaaccttgtt |
35511471 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||| |||||| |||||||| |||||||||||||||||| || |||||||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
35511470 |
tcaagtgtaacaccccacaaaatgtaacac-----actatcacataatatcatcaaatctgtttgcatgttaaagatgccaacgataaaatagtacatgt |
35511376 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||| ||| |||||||||||||||||| |
|
|
| T |
35511375 |
aagttcaagatgttgcaagcattacta |
35511349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 37 - 228
Target Start/End: Original strand, 35934013 - 35934205
Alignment:
| Q |
37 |
catagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttaccttgttataagcgtaacacctcacaaagtgtaacacttaag |
135 |
Q |
| |
|
|||||||||||||| |||||||||||||| || ||||||||||||| |||| ||| ||||||||| |||| |||||||| ||||||||||||||||||| |
|
|
| T |
35934013 |
catagtatcatcaattcatcagattaacaagaatacacttaatctagtttttatcctaccttgttttaagtgtaacaccctacaaagtgtaacacttaag |
35934112 |
T |
 |
| Q |
136 |
actatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactag |
228 |
Q |
| |
|
|||||||||| |||||| |||| ||||| |||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
35934113 |
actatcacatgatatcagcaactttgtttccatgttaaagatgtcaacaataaaatagtaccggtaagtccaagatgttgcaagcattactag |
35934205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 25501018 - 25500791
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||||| || ||||||||||| | | | ||||||||||||| |||||||||||||| || || ||||||| |||||||||| ||||||||| |
|
|
| T |
25501018 |
cactgtttgtacactgccatcaaaagttaagtccctatagtatcatcaattcatcagattaacaagaataaacttaatttaattttatcctaccttgttt |
25500919 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||| ||||||| |||||| |||| | ||| ||||||||||| || || ||||||||||||||||| |
|
|
| T |
25500918 |
taagtgtaacaccccacaaagtgtaacacttaagatcatcacatgatatcagcaactttctttagatgttaaagatgccaacgataaaatagtacctgta |
25500819 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| || |||||||||||||||||||| |
|
|
| T |
25500818 |
agtctaagatgttgcaagcattactaga |
25500791 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #34
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 39572901 - 39573121
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||| || |||||||||||||||| ||||||||||||||| || |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
39572901 |
ccactgtttgtgcagtgacatcaaaagttcagttctcatagtatcataaattcatcagattaacaagaatacacttaatctaattttatcctaccttgtt |
39573000 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| | |||||||||||||||| |||||||||||| |||||| ||||| |||||||||| || | |||||||||||| ||| |
|
|
| T |
39573001 |
ttaagtgtaacatcccacaaagtgtaacactcgagactatcacatgatatcaacaactc--------tgttaaagatgccaatgataaaatagtacatgt |
39573092 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
39573093 |
aagtccaagatgttgcaagcattactaga |
39573121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #35
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 41 - 229
Target Start/End: Complemental strand, 13956415 - 13956227
Alignment:
| Q |
41 |
gtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactat |
140 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||||||||||||||||| ||| |||||| ||| |||||||| |||||| ||||||||||||||||| |
|
|
| T |
13956415 |
gtatcatcaattcatcagattaacaaaacttcacttaatctaattttattttatcttgtttcaagtgtaacaccctacaaagcgtaacacttaagactat |
13956316 |
T |
 |
| Q |
141 |
cacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| |||||||||| || | |||||||||||||||||| || || |||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
13956315 |
catataatatcatcaaatttgtttgcatgttaaagatgccaacgataaaatagtacctgttagtccaagatgttgcaagcattactaga |
13956227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #36
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 7693312 - 7693531
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| ||| |||||||||||| |||| ||||||||| || ||| ||||||||||||||||||||||||||| |
|
|
| T |
7693312 |
ccactgtttgtacagtggcatcaaaagttcaatcctcttagtatcatcaattcattagattaacatgaatacgcttaatctaattttatcttaccttgtt |
7693411 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||| |||||| |||| | ||||||||||||||||||||||| | || |||||||| ||| ||| |
|
|
| T |
7693412 |
ttaagtgtaacaccccacaaagtgtaacac---------tcacatgatattagcaactctgtttgcatgttaaagatgtcaacgataaaataatacttgt |
7693502 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
7693503 |
aagtctaagatgttgcaagcattactaga |
7693531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #37
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 8437052 - 8437275
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| |||||||||||||||| | ||||| |||||||||| ||||||||| ||| |||| ||||||||||||||||| | ||||||| ||| |
|
|
| T |
8437052 |
tgtttgtacagtgacatcaaaagttcagtcctcattatatcatcaac-catcagatttacaaaactatgcttaatctaattttatcctgccttgttttaa |
8437150 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| ||||| ||||| ||||||||||||||| ||||||||||||| || ||||||||||| ||||||||||| || || |||||||||||||||||||| |
|
|
| T |
8437151 |
gttatacaccccacaatgtgtaacacttaagattatcacataatatgatcaactctgtttgaatgttaaagatgccaacgataaaatagtacctgtaagt |
8437250 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| |||||| || |||||||||| |
|
|
| T |
8437251 |
ccaagatgttgaaaacattactaga |
8437275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #38
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 26268156 - 26268332
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||| |||||||||||||| | | | |||||||||||||| |||||||||||||| || |||| |||||| ||||||||| ||||||||| |
|
|
| T |
26268156 |
ccactgtttgtacggtgacatcaaaagtttagtccacatagtatcatcaattcatcagattaacaagaatacaattaatcaaattttatcataccttgtt |
26268255 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagat |
177 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
26268256 |
ttaagtgtaacaccgcacaaagtgtaacacttaagactatcacatgatatcagcaactatgtttgcatgttaaagat |
26268332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #39
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 1429238 - 1429027
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || |||||||| |||| | |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||| ||||||||| |
|
|
| T |
1429238 |
ccactgtttgtacactggcatcaaaaattcagtctccatagtatcatcaattcatcaaattaacaagactacatttaatctaattttatcctaccttgtt |
1429139 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||| || || |||||||||||||||| |
|
|
| T |
1429138 |
ttaag-----------------tgtaacacttaagactatcacataatatcataaactttatttgcatgttaaagatgccaacgataaaatagtacctgt |
1429056 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
1429055 |
aagtccaagatgttgcaagcattactaga |
1429027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #40
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 6824574 - 6824346
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagt--tcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttg |
98 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||| | ||||||||||||||| | |||||||||||| || ||||||||||||||||||||| ||||||| |
|
|
| T |
6824574 |
ccactgtttgtacagtgacatcaaaagtgttcagtcttcatagtatcatcaatttatcagattaacaagaatacacttaatctaattttatcataccttg |
6824475 |
T |
 |
| Q |
99 |
ttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacct |
198 |
Q |
| |
|
|| ||| |||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| | | |||||| | ||| | |
|
|
| T |
6824474 |
ttttaaatgtaacaccccacaaagtgtaacacttaagactatcacaagatat-agcaactctgtttgcatgttaaagatgtc-aagataaaacaatacat |
6824377 |
T |
 |
| Q |
199 |
gtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| || ||||||||||||| |||||| |
|
|
| T |
6824376 |
gtaagtctaagatgttgcaagcatcactaga |
6824346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #41
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 32563231 - 32563450
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||| |||||| |||||||||||||||| | | | || ||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
32563231 |
ccactgtctgtacagtgacatcaaaagttcagtccccttaatatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgtt |
32563330 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| | ||||||||||||||| |||||| |||||| |||||||||||||||||| |||| || || |||||||||||| ||| |
|
|
| T |
32563331 |
ttaagtgtaacagcccacaaagtgtaacac---------tcacatgatatcagcaactctgtttgcatgttatagatgccaacgataaaatagtacatgt |
32563421 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||| ||||||||| |
|
|
| T |
32563422 |
aagtctaagatgttgcaagaattactaga |
32563450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #42
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 9200315 - 9200534
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| ||||||||| |||||||||||||| | | ||| |||||||||||| |||||| ||||||| || |||| |||||||||||||||| ||||||||| |
|
|
| T |
9200315 |
ccacagtttgtacagtgacatcaaaagtttagtcctcttagtatcatcaattcatcatattaacaagaatacatttaatctaattttatcctaccttgtt |
9200414 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||||| || || ||||||||||| || | |
|
|
| T |
9200415 |
ttaagtgtaacattccacaaagtgtaacac---------tcacatgatatcagcaactctgtttgcatgttaaagatgccaacgataaaatagtatctat |
9200505 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
9200506 |
aagtctaagatgttgcaagcattactaga |
9200534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #43
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 229
Target Start/End: Complemental strand, 2888472 - 2888310
Alignment:
| Q |
67 |
gactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgc |
166 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||| ||||| || |||||||||||||||||||||||| |||||||||| || | ||||||| |
|
|
| T |
2888472 |
gactacacttaatctaattttattttaccttgtttcaagtttaacattccataaagtgtaacacttaagactatcagataatatcatcaaatatgtttgc |
2888373 |
T |
 |
| Q |
167 |
atgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||| | || |||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
2888372 |
atgttaaagatgtcaacgataaaatagtacctgtaagtccaagatgttacaagcattactaga |
2888310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #44
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 15724572 - 15724798
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||| ||||||||||||||| ||||| | | |||| ||||||||| |||||| ||||||| || |||||||||| ||||||||| |||||| || |
|
|
| T |
15724572 |
ccactgtttatacaatgacatcaaa-gttcagtcc-cataatatcatcaattcatcaaattaacaagaatacacttaatttaattttattctaccttatt |
15724669 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| | ||||||||| || |||||||||||| || |||||| |||| ||||| |||||||||||| | || |||||||||||| ||| |
|
|
| T |
15724670 |
ttaagtataacacgccccaaagtgtatcaattaagactatcatatgatatcaacaactttgtttacatgttaaagatgtcaactataaaatagtacttgt |
15724769 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||| ||| ||||||||||||| |
|
|
| T |
15724770 |
aagtccaaaatattgtaagcattactaga |
15724798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #45
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 42342851 - 42343031
Alignment:
| Q |
39 |
tagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagact |
138 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||||||||||||||||||||||| |||||| |||| |||| || ||||||||||||||| |
|
|
| T |
42342851 |
tagtatcatcaattcatcagattaacaagaatacacttaatctaattttatctta-cttgttttaagtgtaatacaccacaaagtgtaacac-------- |
42342941 |
T |
 |
| Q |
139 |
atcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||| | || ||||||||| || |||||||| || |||||||||||||||||||| |
|
|
| T |
42342942 |
-tcacatgatatcatcaactctgtttgcatgttaaagatgtcaacgataaaataggacatgtaagtctaagatgttgcaagcattactaga |
42343031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #46
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 5112406 - 5112247
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||| | | |||||||||||||| |||| | ||||||| ||||| |||||||||||||||||| |||| |||| |
|
|
| T |
5112406 |
ccactgtttgtacagtggcatcaaaagttcagtccccatagtatcatcaattcattaaattaacaagactatacttaatctaattttatcataccatgtt |
5112307 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctg |
161 |
Q |
| |
|
|||| |||| ||| |||||||| ||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
5112306 |
ttaagtgtaa-accccacaaagtacaacacttaagactttcacataatatcatcaactctg |
5112247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #47
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 14409401 - 14409208
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcac |
118 |
Q |
| |
|
||||||||||||| | |||||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||||||||| |||| ||||| ||| |
|
|
| T |
14409401 |
catcaaaagttcagt-ctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttattctaccttgttttaagtgtaactactc-- |
14409305 |
T |
 |
| Q |
119 |
aaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaa |
218 |
Q |
| |
|
||||||||||| ||||||||||| |||| |||||||||||||||||| | || |||||||||||| ||||||||||| ||||||||| |
|
|
| T |
14409304 |
------------ttaagactatcgcataatatcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacttgtaagtccaagatgttgcaa |
14409217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #48
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 22019718 - 22019933
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||| | |||||||||||||| | | | | ||||||||||| |||||| ||||||| || ||||||||||||||||||||| |||||| || ||| |
|
|
| T |
22019718 |
tgtttgtatagtgacatcaaaagttaagtccccttagtatcatcacttcatcatattaacaagaatacacttaatctaattttatcctaccttattttaa |
22019817 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||||||| |||||||| |||||| |||||| |||||| |||||| |||||||||||||||| || || |||||||| ||| ||||||| |
|
|
| T |
22019818 |
gtgtaacaccccacaaagtataacac---------tcacatgatatcagcaactctatttgcatgttaaagatgccaacgataaaataatacttgtaagt |
22019908 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
| || |||||| ||||||||||||| |
|
|
| T |
22019909 |
ctaagatgttgtaagcattactaga |
22019933 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #49
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 25889584 - 25889680
Alignment:
| Q |
133 |
aagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||| |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||| |||||| ||||||||||||| |
|
|
| T |
25889584 |
aagattatgacataatatcatcaactctgtttgcatgttaaagataccaacaataaaatagtacctgtaaatccaagatgttgaaagcattactaga |
25889680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #50
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 70 - 229
Target Start/End: Original strand, 25669737 - 25669886
Alignment:
| Q |
70 |
tacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatg |
169 |
Q |
| |
|
||||||||||||||||||||| ||| ||||| |||| ||||||| ||||| |||||||||| ||||| ||||||| ||||||||||||||| |
|
|
| T |
25669737 |
tacacttaatctaattttatcctactttgttttaagtgtaacactccacaa-gtgtaacact---------cacatgatatcatcaactctgtttgcatg |
25669826 |
T |
 |
| Q |
170 |
ttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| | || |||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
25669827 |
ttaaagatgtcaacgataaaatagtacatgtaagtctaaaatgttgcaagcattactaga |
25669886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #51
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 28416620 - 28416490
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || |||||||||||||| | || ||||||||| |||||||||||||| || |||||||||||||||||||| | |||| || |
|
|
| T |
28416620 |
ccactgtttgtacagtggaatcaaaagttcaatctccttaatatcatcaattcatcagattaacaagaatacacttaatctaattttattctgccttatt |
28416521 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacact |
131 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |
|
|
| T |
28416520 |
ttaagtgtaacaccccacaaagtgtaacact |
28416490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 8466832 - 8467036
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagc |
106 |
Q |
| |
|
|||||||| || |||||||||||||| | |||||||||||||| |||||| ||||||| || |||||||||| ||||||||| ||||||||| ||| |
|
|
| T |
8466832 |
tttgtacagtggtatcaaaagttcaatccccatagtatcatcaattcatcaaattaacaagaatacacttaatttaattttattctaccttgttttaaa- |
8466930 |
T |
 |
| Q |
107 |
gtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc |
206 |
Q |
| |
|
|||||||||||||||||||| || |||||| |||||||||| ||| |||||| | || |||||||| || ||||||||| |
|
|
| T |
8466931 |
----------------tgtaacacttaagactatcatatgatatcaccaactctgtttacatattaaaggtgta-acgataaaatattatttgtaagtcc |
8467013 |
T |
 |
| Q |
207 |
aaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
8467014 |
aaaatgttgcaagcattactaga |
8467036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 11898151 - 11898199
Alignment:
| Q |
116 |
cacaaagtgtaacacttaagactatcacataatatcataaactctgttt |
164 |
Q |
| |
|
||||||||||||| ||||||| |||||||||| ||||| |||||||||| |
|
|
| T |
11898151 |
cacaaagtgtaacccttaagaatatcacataacatcatcaactctgttt |
11898199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25668731 - 25668804
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacac |
74 |
Q |
| |
|
|||||||||| ||| || ||||||||||||| | | | |||||||||||| |||| ||||||||| || ||||| |
|
|
| T |
25668731 |
ccactgtttgaacagtggcatcaaaagttcagtccccttagtatcatcaattcattagattaacaagaatacac |
25668804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 28416460 - 28416419
Alignment:
| Q |
185 |
ataaaatagtacctgtaagtccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||||||||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
28416460 |
ataaaatagtacttttaagtccaagatgttgcaagcattact |
28416419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 11898091 - 11898139
Alignment:
| Q |
8 |
ttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatc |
56 |
Q |
| |
|
||||||| |||||||||||||| | | |||||||||||||||| ||||| |
|
|
| T |
11898091 |
ttgtacagtgacatcaaaagtttagtcctcatagtatcatcaattcatc |
11898139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 173; Significance: 7e-93; HSPs: 58)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 42506178 - 42505950
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||| | |
|
|
| T |
42506178 |
ccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgct |
42506079 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| || |||||||||||||||| |
|
|
| T |
42506078 |
ataagcgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaacgttgttcgcatgttaaagattccaacgataaaatagtacctgt |
42505979 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
42505978 |
aagtccaagatgttgcaagcattactaga |
42505950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 48355018 - 48355242
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
48355018 |
tgtttgtacaatggcatcaaaagttcagttctcatagtatcatcaactcatcagattaacaagactacacttagtctaattttatcctaccttgttataa |
48355117 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
48355118 |
atgtaacataccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagattccgacaataaaatagtatctgtaagt |
48355217 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| |||||||||| ||||||||| |
|
|
| T |
48355218 |
ccaagatgttgcaagtattactaga |
48355242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 4761751 - 4761527
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
4761751 |
cactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaactcatctgattaacaagactacacttaatctaattttatcctaccttgtta |
4761652 |
T |
 |
| Q |
102 |
taagcgtaacacctc-acaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||| | ||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4761651 |
taagtataacacccccacaaagtataacacttaagactatcacataatatcatcaactatatttgcatgttaaagattccgacaataaaatagtacctat |
4761552 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattac |
225 |
Q |
| |
|
|||||||||||||||||| |||||| |
|
|
| T |
4761551 |
aagtccaaaatgttgcaaacattac |
4761527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26941363 - 26941135
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||| | ||||| ||||||| || |||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
26941363 |
ccactgtttgtataatgacatcaaaagttcagtcctcatggtatcattaattcatcagattaacaagactacacttaatctaattttatcctaccttgtt |
26941264 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||| ||| |
|
|
| T |
26941263 |
ataagcgtaatacctcataaagtgtaacacttaaaactatcatataatatcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgt |
26941164 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
26941163 |
aagtccaagatgttgcaagcattactaga |
26941135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 46994754 - 46994536
Alignment:
| Q |
11 |
tacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaa |
110 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
46994754 |
tacaatgacatcaaaagttcagtcctcatagtatcatcaactcatatgattaacaagactacacttaatctaattttatcctaccttgttataagtgtaa |
46994655 |
T |
 |
| Q |
111 |
cacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaa |
210 |
Q |
| |
|
| || |||||| ||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
46994654 |
cgccccacaaaatgtaacacttaagactatcacataatatcatcaattatgtttgcatgctaaagattccgacaataaaatagtacctgtaagtccaaga |
46994555 |
T |
 |
| Q |
211 |
tgttgcaagcattactaga |
229 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
46994554 |
tattgcaagcattactaga |
46994536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 34133008 - 34133236
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | | |||| ||||||||| |||||||| ||| | || |||||||||| |||||||||| ||||||||| |
|
|
| T |
34133008 |
ccactgtttgtacaatgacatcaaaagttcagtccccataatatcatcaattcatcagactaataagaatacacttaatataattttatcctaccttgtt |
34133107 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||| || || |||||||||||||||| |
|
|
| T |
34133108 |
ttaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaattttgtttgcatgttaaagatgccaacgataaaatagtacctgt |
34133207 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
34133208 |
aagtccaagatgttgcaagcattactaga |
34133236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 40552362 - 40552134
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | |||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||| |
|
|
| T |
40552362 |
ccaccgtttgtacaatgacatcaaaagttcagtcctcataatatcatcaattcatcagattaacaacactacacttaatttaattttatcttagcttgtt |
40552263 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||||| | ||||| |||||||||||| || | |||||||||||||| |||||||||||||||||||||||||| || |||||||||||| ||| |
|
|
| T |
40552262 |
ataagcgtaacatcccacaacgtgtaacacttaggattgtcacataatatcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgt |
40552163 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
40552162 |
aagtccatgatgttgcaagcattactaga |
40552134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 39282725 - 39282953
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||| |||| || ||||||||||||| |||||||| ||||||| | |||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
39282725 |
ccactgtttatacagtggcatcaaaagttcagttctcatattatcatccattcatcagattaacaagactacacttaatctaattttatcctaccttgtt |
39282824 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||||||||||||| || | ||||||| |||||||||| | |||||||||||||| |||| |
|
|
| T |
39282825 |
tcaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaaatatgtttgcctgttaaagatgtcaacaataaaatagtatctgt |
39282924 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| |||||||||||||||||||||||||| |
|
|
| T |
39282925 |
aaatccaaaatgttgcaagcattactaga |
39282953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 46297865 - 46297637
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||| | ||||||||||| | | | |||||||||||| |||| ||||||||| ||||||||||||| || |||||| ||||||||| |
|
|
| T |
46297865 |
ccactgtttgtacaatggcgtcaaaagttcagtccccgtagtatcatcaattcattagattaacaaaactacacttaatcaaactttatcctaccttgtt |
46297766 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||| |
|
|
| T |
46297765 |
ttaagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagattccaacgataaaatagtatttgt |
46297666 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
46297665 |
aagtccaagatgttgcaagcattactaga |
46297637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 3655305 - 3655077
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
3655305 |
ccaccgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgtt |
3655206 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
| ||||||||||| |||||| |||||||||||| |||||||||| ||||||| | |||||||||||||||||||||||| | |||||||| || | | |
|
|
| T |
3655205 |
agaagcgtaacacaccacaaaatgtaacacttaaaactatcacatgatatcatcagctctgtttgcatgttaaagattccatcgataaaataacacatat |
3655106 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
3655105 |
aagtccaagatgttgcaagcattactaga |
3655077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 24489065 - 24488837
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||| | | |||| ||||||||| |||||||| ||||| || ||||||||||||||||||||||||| ||||| |
|
|
| T |
24489065 |
ccactgtttgcacaatgacatcaaaagttcagtccccatattatcatcaattcatcagactaacaagaatacacttaatctaattttatcttacattgtt |
24488966 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| || ||||||||||||| | || |
|
|
| T |
24488965 |
ttaagtgtaacacctcacaaggtgtaacacttaagactatcacacaatatcatcaactctatttgcatgttaaagatgccaacaataaaatagtgtcagt |
24488866 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||| |||||||||||||||||||| |
|
|
| T |
24488865 |
aagttcaagatgttgcaagcattactaga |
24488837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 52041021 - 52040797
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||| | || ||||||||||||| | ||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
52041021 |
tgtttgtatagtggcatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagattacacttaatctaattttatcctaccttgttttaa |
52040922 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| |||| ||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||| ||||||| |
|
|
| T |
52040921 |
gtgtaataccccacatagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagt |
52040822 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||||||||| |||||||||| |
|
|
| T |
52040821 |
ccaagatgttgcaaacattactaga |
52040797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 21009905 - 21009677
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||| |||||||||||||||||| |||||| ||||||||| ||||||| |||||| ||||||||||||| |||||||||| || |||||| |
|
|
| T |
21009905 |
ccactatttgtagaatgacatcaaaagttcagccctcatattatcatcaattcatcaggttaacaagactacacttaatataattttatcataacttgtt |
21009806 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
21009805 |
ctaagcataacactctacaaagtgtaacacttaagactatcacataatatcatcaacaatatttgcatgttaaagattccaacgataaaatagtacctgt |
21009706 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
21009705 |
aagtctaagatgttgcaagcattactaga |
21009677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 47481595 - 47481823
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||| | |||||||||||||||| |||||| |||||| ||||||||||||| ||||||||| |||||| || |
|
|
| T |
47481595 |
ccactgtttgtagaatgacatcaaaagtttagccctcatagtatcatcaattcatcatgttaacaagactacacttaatataattttattataccttatt |
47481694 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | || |||||||||||| ||| |
|
|
| T |
47481695 |
ctaagcataacaccctacaaagtgtaacacttaagactatcacataatatcataaactctatttgcatattaaagatttcaacgataaaatagtacttgt |
47481794 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||| |||||||||||||||||||| |
|
|
| T |
47481795 |
aagttcaagatgttgcaagcattactaga |
47481823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 2008006 - 2008233
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||||| | ||||| |||||||| |||||||||||||| || || |||||||||||||||||| ||||| ||| |
|
|
| T |
2008006 |
ccactgtttgtacagtggcatcaaaagttcaatccccatagcatcatcaattcatcagattaacaagaatatacttaatctaattttatcctacctcgtt |
2008105 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||| ||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | || |||||||||||| ||| |
|
|
| T |
2008106 |
ttaagtgta-cactccacaaagtgtaacacttaagactatcacatgatatcagcaactctgtttgcatgttaaagatgacaacgataaaatagtacttgt |
2008204 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
2008205 |
aagtccaagatgttgcaagcattactaga |
2008233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 53229251 - 53229027
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| | ||||||||||||| | ||||| ||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||| || ||| |
|
|
| T |
53229251 |
tgtttgtacagttgcatcaaaagttcagtcatcataatatcatcaattcatcagattaacaagactacagttaatctaattttatcctaccttattttaa |
53229152 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
| ||||| || ||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| || || |||||||| ||| ||||||| |
|
|
| T |
53229151 |
gtgtaactccccacaaagtgtaacacttaagactatcacatagtatcatcaactttgtttgcatgttaaagatgccaacgataaaataatacatgtaagt |
53229052 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
53229051 |
tcaagatgttgcaagcattactaga |
53229027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 11466897 - 11467114
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||| | | | |||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
11466897 |
ccactgtttgtacagtggcatcaaaagtttagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgtt |
11466996 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||| ||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| || || | ||||||||||||| |
|
|
| T |
11466997 |
ttaagtgtaataccccacaaagtgtaacacttaagactatcacatgatatcaacaactctgtttgcatgtttaagataccaacgacaaaatagtacctgc |
11467096 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaa |
218 |
Q |
| |
|
||||| || ||||||||| |
|
|
| T |
11467097 |
aagtctaagatgttgcaa |
11467114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 40 - 229
Target Start/End: Original strand, 33698265 - 33698454
Alignment:
| Q |
40 |
agtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagacta |
139 |
Q |
| |
|
||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
33698265 |
agtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaacaccccacaaagtgtaacacttaagacta |
33698364 |
T |
 |
| Q |
140 |
tcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| ||| ||||| ||||||||||||||||||||||| || || ||||||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
33698365 |
tcgcatgatatcggcaactctgtttgcatgttaaagatgccaacgataaaatagtacctgtaagtctaagatattgcaagcattactaga |
33698454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 37203140 - 37203369
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||||| | |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |||||| || |
|
|
| T |
37203140 |
ccactgtttgtacagtggcatcaaaagttcagtcctcatagtatcatcaattcataagattaacaagactacacttaatctaattttatcctaccttatt |
37203239 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcat-aaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
| || ||| |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| | | ||||||||||||||| |
|
|
| T |
37203240 |
tttagtgtatcaccccacaaagtgtaacacttaagactatcacataatatcatcaaatattgtttgtatgttaaagatgtcaatgataaaatagtacctg |
37203339 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||| || | ||||||||||||||| |
|
|
| T |
37203340 |
taagtccaatatatcgcaagcattactaga |
37203369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 54828793 - 54828576
Alignment:
| Q |
12 |
acaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaac |
111 |
Q |
| |
|
|||| |||||||||| |||| | |||||| |||||||| |||||| || |||| |||||||||||||||||||||||| |||||| ||||||| ||||| |
|
|
| T |
54828793 |
acaacgacatcaaaaattcattcttcatagcatcatcaattcatcatatgaacaagactacacttaatctaattttatcctaccttattataagtgtaac |
54828694 |
T |
 |
| Q |
112 |
acctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaat |
211 |
Q |
| |
|
| | ||||||||||||||||||| ||||||| |||||||||| |||| |||||| |||||||| ||||| || |||||||||||| ||||||||||| || |
|
|
| T |
54828693 |
atcccacaaagtgtaacacttaaaactatcaaataatatcatcaactatgtttgtatgttaaaaattccaactataaaatagtacatgtaagtccaagat |
54828594 |
T |
 |
| Q |
212 |
gttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
54828593 |
gttgcaagcattactaga |
54828576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 22451042 - 22451269
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||| || ||||||||||||| | | |||||||||||||| |||||| ||||||| |||| ||||||||||||||||| ||||||||||| |
|
|
| T |
22451042 |
cactgtttgtatggtggcatcaaaagttcagtccccatagtatcatcaattcatcatattaacaagactgcacttaatctaattttaccttaccttgttt |
22451141 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||||| || |||||||||| |||| |||||| |||||||||| |||| |||||||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
22451142 |
taagtgtaacaccccagtaagtgtaacatttaacactatcgtataatatcatcaactatgtttgcatgttaaagatgtcaacaataaaatagtacatgta |
22451241 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
22451242 |
agtccaagatgttgcaagcattactaga |
22451269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 22622780 - 22622593
Alignment:
| Q |
42 |
tatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatc |
141 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||| |||||||||||||||||| |
|
|
| T |
22622780 |
tatcatcaattcatcagattaacaaaactacacttaatctaattttatcataccttgtttcaagtgtaacaccccacaaagcgtaacacttaagactatc |
22622681 |
T |
 |
| Q |
142 |
acataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||| || |||||||| ||||||||||| | || |||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
22622680 |
acataatatcatcaaatctgtttggatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactaga |
22622593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 24708212 - 24707990
Alignment:
| Q |
9 |
tgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacactta--atctaattttatcttaccttgttataagc |
106 |
Q |
| |
|
|||||| |||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||||||| ||| |
|
|
| T |
24708212 |
tgtacagtgacatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaagactacacttttgatctaattttatcctaccttgtttcaagt |
24708113 |
T |
 |
| Q |
107 |
gtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc |
206 |
Q |
| |
|
|||||||| ||||||||||||||||||| || ||||||||||||||| || | |||||||||||||||||| || || |||||||||||| ||||||||| |
|
|
| T |
24708112 |
gtaacaccccacaaagtgtaacacttaaaacaatcacataatatcatcaaatttgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtcc |
24708013 |
T |
 |
| Q |
207 |
aaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| | ||||||||||||| |||| |
|
|
| T |
24708012 |
aagaagttgcaagcattattaga |
24707990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 7327579 - 7327357
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagc |
106 |
Q |
| |
|
|||||||| |||||||||||||||| | | |||||||||||||| ||||| |||||||| || |||||||||| || ||||||| |||||| || || |
|
|
| T |
7327579 |
tttgtacagtgacatcaaaagttcagtccccatagtatcatcaattcatcggattaacaagaatacacttaatttatttttatcctaccttctttctagt |
7327480 |
T |
 |
| Q |
107 |
gtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc |
206 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||| || || |||||||||||| |||||||| |
|
|
| T |
7327479 |
gtaacaccccacaaagtgtaacacttaagactatcacatgatatcaacaactctatttgcatgttaaagatgccaacgataaaatagtacttgtaagtct |
7327380 |
T |
 |
| Q |
207 |
aaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
7327379 |
aagatgttgcaagcattactaga |
7327357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 32373543 - 32373771
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || |||||||||||| | | || |||||||||| |||||| ||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
32373543 |
ccactgtttgtacagtggcatcaaaagttccaccccaatggtatcatcaattcatcatattaacaagaatacacttaatctaattttatcctaccttgtt |
32373642 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| | |||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||| | || |||||||||||| ||| |
|
|
| T |
32373643 |
ttaagtgtaacatcccacaaagtgtgacacttaagactatcacatgatatcagcaactctgtttgcatattaaagatgtcaacgataaaatagtacttgt |
32373742 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
32373743 |
aagtctaagatgttgcaagcattactaga |
32373771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 33378882 - 33378660
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagc |
106 |
Q |
| |
|
||||||| |||||||||||||||| | | |||||||| ||||| |||||||||||||| |||| ||||||||||||||||||| ||||||||| |||| |
|
|
| T |
33378882 |
tttgtacggtgacatcaaaagttcagtccccatagtattatcaattcatcagattaacaagactgcacttaatctaattttatcctaccttgttttaagt |
33378783 |
T |
 |
| Q |
107 |
gtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc |
206 |
Q |
| |
|
|||||||| || |||||||| ||||||||||||| |||||| |||| |||| |||||||||||||||||| | || |||||||||||| ||||||| | |
|
|
| T |
33378782 |
gtaacaccccaagaagtgtaatacttaagactatcgcataatctcatcaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagttc |
33378683 |
T |
 |
| Q |
207 |
aaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| ||||||||| |||||||||| |
|
|
| T |
33378682 |
aagatgttgcaaacattactaga |
33378660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 8 - 229
Target Start/End: Original strand, 37157787 - 37158009
Alignment:
| Q |
8 |
ttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcg |
107 |
Q |
| |
|
||||||| || ||||||||||||| | ||||||||||||||| | || ||||||||| |||||||||||||||||||||||| |||||| || ||| | |
|
|
| T |
37157787 |
ttgtacagtggcatcaaaagttcagtcatcatagtatcatcaatttataagattaacaagactacacttaatctaattttatcctaccttatttcaagtg |
37157886 |
T |
 |
| Q |
108 |
taacacctcacaaagtgtaacacttaagactatcacataatatcat-aaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc |
206 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| || | |||||||||||| ||||||||| |
|
|
| T |
37157887 |
taacaccccacaaagtgtaacacttaagactatcacataatatcatcaaatattgtttgtatgttaaagatgccaatgataaaatagtacatgtaagtcc |
37157986 |
T |
 |
| Q |
207 |
aaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| |||| ||||||||||||||| |
|
|
| T |
37157987 |
aatatgtcgcaagcattactaga |
37158009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 44891588 - 44891798
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcac |
118 |
Q |
| |
|
||||||||||| | | | |||||||||||||| | |||||||||||| || ||||||||||||||||||||| ||||||||| |||| ||||||| ||| |
|
|
| T |
44891588 |
catcaaaagtttagtccacatagtatcatcaattaatcagattaacaagaatacacttaatctaattttatcctaccttgttttaagtgtaacactccac |
44891687 |
T |
 |
| Q |
119 |
aaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaa |
218 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| | || |||||||||||||| ||||| || ||||||||| |
|
|
| T |
44891688 |
aaagtgtaacacttaagactatcacatgatatcagcaactctgtttgtatgttaaagatgtcaacgataaaatagtacctacaagtctaagatgttgcaa |
44891787 |
T |
 |
| Q |
219 |
gcattactaga |
229 |
Q |
| |
|
||||||||||| |
|
|
| T |
44891788 |
gcattactaga |
44891798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 3362326 - 3362553
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacact--taatctaattttatcttaccttg |
98 |
Q |
| |
|
||||| |||||||| || ||||||||||||| | ||||| |||||||||| |||||| |||||| ||||||||| ||||||||||||||| |||||| |
|
|
| T |
3362326 |
ccactatttgtacagtggcatcaaaagttcactcctcatggtatcatcaattcatcatgttaacaagactacactattaatctaattttatcctacctta |
3362425 |
T |
 |
| Q |
99 |
ttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacct |
198 |
Q |
| |
|
|| |||| | |||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | || ||||||| |||| | |
|
|
| T |
3362426 |
ttttaagtgaaacaccccacaaagtgtaacacttaagactatcacataacatcatcaactctgtttgcatgttaaagatgtcaacgataaaattgtactt |
3362525 |
T |
 |
| Q |
199 |
gtaagtccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||||||| ||||||||||||||||| |
|
|
| T |
3362526 |
agaagtccaatatgttgcaagcattact |
3362553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 54505894 - 54506108
Alignment:
| Q |
14 |
aatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacac |
113 |
Q |
| |
|
||||||||||||| |||| ||||||||||||| || |||| | |||||| ||||||||||||| |||||||||| ||||||||| ||||| |||||| |
|
|
| T |
54505894 |
aatgacatcaaaaattcagc-ctcatagtatcataaatacatcgggttaacaagactacacttaatataattttatcataccttgttctaagcataacac |
54505992 |
T |
 |
| Q |
114 |
ctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgt |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| || ||||||||||| | |||||||||||||| |
|
|
| T |
54505993 |
tctacaaagtgtaacacttaagactatcacataatatcatctactttatttgcatgttaaagattccaacgataaaatagtatttataagtccaaaatgt |
54506092 |
T |
 |
| Q |
214 |
tgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
54506093 |
tgcaagcattactaga |
54506108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 4015535 - 4015760
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
|||||||||| | |||||||||||||||| | |||||||||||||||| |||||| ||||||| || || | ||| |||||||||||| ||| ||||| | |
|
|
| T |
4015535 |
actgtttgtagagtgacatcaaaagttcagtcctcatagtatcatcaattcatcatattaacaagaatataattagtctaattttatcctacattgtttt |
4015634 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| |||||||| |||||||||| ||||||||||||||| ||| ||||| |||| |||||||||||||||||| || || ||||||||||| ||||| |
|
|
| T |
4015635 |
aagtgtaacaccccacaaagtgtcacacttaagactatcgcattgtatcaacaact-tgtttgcatgttaaagatgccaacggtaaaatagtacatgtaa |
4015733 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
4015734 |
gtccaagatgttgcaagcattactaga |
4015760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 229
Target Start/End: Original strand, 45174579 - 45174807
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttaccttgtt |
100 |
Q |
| |
|
||||||||||||| | ||||||||||||| | | |||||||||||||| |||||||||||||| || |||| ||||| ||||||| ||| ||||||||| |
|
|
| T |
45174579 |
cactgtttgtacagtagcatcaaaagttcagtccccatagtatcatcaattcatcagattaacaagaatacatttaatttaatttttatcctaccttgtt |
45174678 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||| | || |||||| |||||||||| |||||||||||| || || ||||||||||| | || |
|
|
| T |
45174679 |
ttaagtgtaacactctacaaagtgtaacacttaagactataatatgatatcagcaactctgtttccatgttaaagatgccaacgataaaatagtaacggt |
45174778 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
45174779 |
aagtccaagatgttgcaagcattactaga |
45174807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 43348331 - 43348556
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||| | || ||||||||||||| | || |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
43348331 |
ccactgtttgtttagtggcatcaaaagttcagt-cttttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgtt |
43348429 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||| | || ||||||| ||||||||||||||||||| |||||| |||||| |||||||||||||||| | || |||||||||||| ||| |
|
|
| T |
43348430 |
ttaagtgtaacatcccataaagtgtgacacttaagactatcacatgatatcaacaactctatttgcatgttaaagatgtcaacgataaaatagtacttgt |
43348529 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||| || |||||||||||||||||| |
|
|
| T |
43348530 |
aagtttaagatgttgcaagcattacta |
43348556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 11357467 - 11357256
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| | ||||||||||||| | ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||| || |
|
|
| T |
11357467 |
ccactgtttgtacagttgcatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagactacatttaatctaattttatcctaccttatt |
11357368 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
11357367 |
ttaag-----------------tgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagataccaacgataaaatagtacttgt |
11357285 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
11357284 |
aagtccaagatgttgcaagcattactaga |
11357256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 22446162 - 22445943
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattc-tcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
|||||||| || |||||||||||||| | ||||||||||||||| |||||| || || | |||||||||||||||||||||||| ||| ||||| |||| |
|
|
| T |
22446162 |
tttgtacagtggcatcaaaagttcaaaccctcatagtatcatcaattcatcatataaataagactacacttaatctaattttatcctacattgttttaag |
22446063 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
||||||| |||||| || ||||||| |||||||||| |||||||||| |||| | ||||||| |||||||| || || |||||||||||||| |||||| |
|
|
| T |
22446062 |
tgtaacac-tcacaatgtataacactcaagactatcatataatatcatcaactatttttgcatattaaagataccaacgataaaatagtacctttaagtc |
22445964 |
T |
 |
| Q |
206 |
caaaatgttgcaagcattact |
226 |
Q |
| |
|
|||||||||||||| |||||| |
|
|
| T |
22445963 |
caaaatgttgcaagtattact |
22445943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 21193679 - 21193906
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| | |||||||||||||||| | | ||| ||||||| || |||||||||||||| || |||| |||||||||||||||| ||||||||| |
|
|
| T |
21193679 |
ccactgtttgtagagtgacatcaaaagttcagtccccatggtatcattaattcatcagattaacaagaatacatttaatctaattttatcctaccttgtt |
21193778 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacactt-aagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
|||| ||||||| || |||| |||||||| |||||||||| || |||||| ||||||||||||||||||||||||| || ||||||||||| | | |
|
|
| T |
21193779 |
ttaagtgtaacactccataaaggataacacttaaagactatcatatgatatcagcaactctgtttgcatgttaaagattctcacgataaaatagtagccg |
21193878 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
||||| ||| ||||||||| |||||||| |
|
|
| T |
21193879 |
taagttcaagatgttgcaaccattacta |
21193906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 25579822 - 25580040
Alignment:
| Q |
11 |
tacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaa |
110 |
Q |
| |
|
|||| |||||||||||||||| | | |||| |||||||| | || ||||||||| | ||||||||||||||||||||| ||||||||| | || |||| |
|
|
| T |
25579822 |
tacagtgacatcaaaagttcagtccccatattatcatcagtttattagattaacaaaaatacacttaatctaattttatcctaccttgtttttagtgtaa |
25579921 |
T |
 |
| Q |
111 |
cacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaa |
210 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| || || |||||| |||||| ||| || || | |
|
|
| T |
25579922 |
caccccacaaagtgtaacacttaagactattacatgatatcagcaactctgtttgcatgttaaagatgccaacgataaaactgtacctataaatctaaga |
25580021 |
T |
 |
| Q |
211 |
tgttgcaagcattactaga |
229 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
25580022 |
tattgcaagcattactaga |
25580040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 51213084 - 51212955
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||| | | ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
51213084 |
ccactgtttgtacaatggcatcaaaagttgagtcctcatagtatcatcaactcatcagattaacaagactacacttaatataattttatcctaccttgtt |
51212985 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacac |
130 |
Q |
| |
|
||||| |||||||| ||||||||||||||| |
|
|
| T |
51212984 |
ataagtgtaacaccccacaaagtgtaacac |
51212955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 38591778 - 38591994
Alignment:
| Q |
8 |
ttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcg |
107 |
Q |
| |
|
|||||||||| ||||||||||| | | | |||| ||| |||||||||||||||||||| |||||||||||||||||||||||| || |||||| ||| | |
|
|
| T |
38591778 |
ttgtacaatggcatcaaaagttaagtccacatattattatcaactcatcagattaacaagactacacttaatctaattttatcctatcttgtttcaagtg |
38591877 |
T |
 |
| Q |
108 |
taacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcca |
207 |
Q |
| |
|
||| ||| |||||| || ||||||||||||||||||||||||||| || ||| ||||||||| |||||| | || |||||| |||| ||||| |||| |
|
|
| T |
38591878 |
taataccccacaaaacgtgacacttaagactatcacataatatcatcaaatctatttgcatgtcaaagatgacaacgataaaaaagtatttgtaaatcca |
38591977 |
T |
 |
| Q |
208 |
aaatgttgcaagcatta |
224 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
38591978 |
agatgttgcaagcatta |
38591994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 43975991 - 43975767
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| ||||||| ||||||||||||||| ||| |||||| ||||||||| |||||||||||||| | | |||||||||||||||||||||| |||||| |
|
|
| T |
43975991 |
ccactatttgtacgatgacatcaaaagtttaatcctcataatatcatcaattcatcagattaacaaaattgcacttaatctaattttatcttatcttgtt |
43975892 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaact---ctgtttgcatgttaaagattccgacaataaaatagtacc |
197 |
Q |
| |
|
|||| |||||||| || |||||||||| |||||| ||||||||||| |||| ||||| |||||||||||| || || |||||||||||| |
|
|
| T |
43975891 |
ttaagtgtaacaccccagaaagtgtaac-------actatcgcataatatcatcaactatgttgtttacatgttaaagatgccaacgataaaatagtact |
43975799 |
T |
 |
| Q |
198 |
tgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||| || ||||||||||||||||| |
|
|
| T |
43975798 |
tgtaagtccaagattttgcaagcattactaga |
43975767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29099428 - 29099647
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| ||||||| |||||||| | | | |||||||||||| |||||| ||||||| || |||||||||| |||||||||| | |||| || |
|
|
| T |
29099428 |
ccactgtttgtacagtgacatctaaagttcagtccccttagtatcatcaattcatcatattaacaagaatacacttaatttaattttatcgtgccttatt |
29099527 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||| ||| |||||| |||||| ||||||||||||||||||||||| | || |||||||||||||| | |
|
|
| T |
29099528 |
ttaagtgtaacaccccacaaagtgta---------actttcacatgatatcagcaactctgtttgcatgttaaagatgctaacgataaaatagtaccttt |
29099618 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
29099619 |
aagtccaagatgttgcaagcattactaga |
29099647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 229
Target Start/End: Original strand, 29163912 - 29164110
Alignment:
| Q |
22 |
caaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaa |
121 |
Q |
| |
|
|||||||||| | ||| |||||||||||| |||||||||||| | || ||||||||||||||||||||| ||||||||| |||| |||||||| |||||| |
|
|
| T |
29163912 |
caaaagttcagtcctcttagtatcatcaattcatcagattaataagaatacacttaatctaattttatcctaccttgttttaagtgtaacaccccacaaa |
29164011 |
T |
 |
| Q |
122 |
gtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagca |
221 |
Q |
| |
|
||||||||| |||||| |||||| ||||||||||||||||||||||| | || |||||||||||| |||||||| || ||||| |||||| |
|
|
| T |
29164012 |
gtgtaacac---------tcacatgatatcagcaactctgtttgcatgttaaagatgctaacgataaaatagtacttgtaagtctaagatgttacaagca |
29164102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 51212743 - 51212646
Alignment:
| Q |
132 |
taagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
51212743 |
taaggctatcacataatatcatcaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaagatgttgcaagcattactaga |
51212646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 54 - 229
Target Start/End: Original strand, 1089819 - 1089994
Alignment:
| Q |
54 |
atcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaaca-cctcacaaagtgtaacacttaagactatcacataatatca |
152 |
Q |
| |
|
||||||| |||| ||||||| | |||||||||||||| ||||||||| |||| |||||| || |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
1089819 |
atcagatcaacaggactacattaaatctaattttatcctaccttgttttaagtgtaacatccccacaaagtgtaacacttaagactatcacataacatca |
1089918 |
T |
 |
| Q |
153 |
taaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||| || || |||||||||||| | ||| ||||| || ||||||||||||||||| |
|
|
| T |
1089919 |
acaactctatttgcatgttaaagatgccaacgataaaatagtacat-taaatccaagattttgcaagcattactaga |
1089994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 35844400 - 35844575
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaa-ttttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||| |||||||||||||| | | | |||||||||||||| |||||||||||||| || |||||||||||||| ||||||| ||||| ||| |
|
|
| T |
35844400 |
cactgtttgtacagtgacatcaaaagtttagtccccatagtatcatcaattcatcagattaacaagaatacacttaatctaatttttatcctacctagtt |
35844499 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagat |
177 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||| |||||||| |||||| |||| ||||| |||||||||||| |
|
|
| T |
35844500 |
ttaagtgtaacaccctacaaagtgtaacacttaaga-tatcacatgatatcagtaactttgtttccatgttaaagat |
35844575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 35 - 229
Target Start/End: Original strand, 36012244 - 36012440
Alignment:
| Q |
35 |
ctcatagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttaccttgttataagcgtaacacctcacaaagtgtaacactta |
133 |
Q |
| |
|
|||||| ||||||||| ||||||||| |||| || ||||| |||||||||||| ||| ||||||||| | || |||||| | |||||| ||||||||||| |
|
|
| T |
36012244 |
ctcataatatcatcaattcatcagatgaacaagaatacacctaatctaatttttatcctaccttgttttcagtgtaacatcccacaaaatgtaacactta |
36012343 |
T |
 |
| Q |
134 |
agactatcacataatatcataaactct-gtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||| || |||||| |||||| |||| |||||||||||| || || ||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
36012344 |
agactatcaaatgatatcagcaactcttgtttccatgttaaagatgccaacgataaaatagtaccgataagtccaaaatgctgcaagcattactaga |
36012440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 53176127 - 53176278
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||||| |||||||||||||| | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||| |||| || |
|
|
| T |
53176127 |
ccactgtttgtacaataacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagattacacttaatctaattttatccaacctcatt |
53176226 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatca |
152 |
Q |
| |
|
||| |||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
53176227 |
ttaaatataacactccacaaagtgtaacacttaagactatcacatgatatca |
53176278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 20373263 - 20373140
Alignment:
| Q |
85 |
tttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgaca |
184 |
Q |
| |
|
|||||| ||||||||||||||||||| | | || |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| || |
|
|
| T |
20373263 |
tttatcctaccttgttataagcgtaatatcccataaagtgtaacacttaaaactatcacataatatcatcaactctgtttgcatgttaaagattccaacg |
20373164 |
T |
 |
| Q |
185 |
ataaaatagtacctgtaagtccaa |
208 |
Q |
| |
|
|||||||||||| | ||||||||| |
|
|
| T |
20373163 |
ataaaatagtacatataagtccaa |
20373140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 27480478 - 27480252
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||||||| |||||||||||||||| | | |||||||||||||| |||||| ||||||| |||| ||||||||||||||||||| ||| ||||| ||| |
|
|
| T |
27480478 |
tgtttgtacggtgacatcaaaagttcagtccccatagtatcatcaattcatcatattaacaagactgcacttaatctaattttatcctacattgttttaa |
27480379 |
T |
 |
| Q |
105 |
gcgtaacacc--------tcaca-----aagtgtaacacttaagactatcacataatatcataaac----tctgtttgcatgttaaagattccgacaata |
187 |
Q |
| |
|
| |||||||| | ||| |||||||||||||||||||||| ||||||||||| ||| | |||||||||||||||||| || || ||| |
|
|
| T |
27480378 |
gtgtaacacccagaagtgtaacacccagaagtgtaacacttaagactatcgcataatatcatcaactatatatgtttgcatgttaaagatgccaacgata |
27480279 |
T |
 |
| Q |
188 |
aaatagtacctgtaagtccaaaatgtt |
214 |
Q |
| |
|
||||||||| ||||||||||||||||| |
|
|
| T |
27480278 |
aaatagtacatgtaagtccaaaatgtt |
27480252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 20373399 - 20373300
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
20373399 |
ccactgtttgtacaatgacatcaaaagttcagttctcatggtatcatcaattcatcaaattaacaagactacacttaatctaattttatcctaccttgtt |
20373300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 14586735 - 14586555
Alignment:
| Q |
39 |
tagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagact |
138 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||||||||||||| |||||| ||||||||| |||| |||||||| ||||||||||||||| |
|
|
| T |
14586735 |
tagtatcatcaattcatcagattaacaagaatacacttaatctaactttatcctaccttgttttaagtgtaacaccccacaaagtgtaacac-------- |
14586644 |
T |
 |
| Q |
139 |
atcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| || |||||| |||| |||||||||||||||||| || || ||||||||||| | |||||||||| |||||||||||||||||||| |
|
|
| T |
14586643 |
-tcgtatgatatcaacaactatgtttgcatgttaaagatgccaacgataaaatagta-cggtaagtccaagatgttgcaagcattactaga |
14586555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 44186601 - 44186392
Alignment:
| Q |
4 |
ctgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttata |
103 |
Q |
| |
|
|||||| |||| |||||||||||||||| | | |||||||||||||| |||||| ||||||| | ||||||||||||||||||||| ||||||||| || |
|
|
| T |
44186601 |
ctgtttatacagtgacatcaaaagttcagtccccatagtatcatcaattcatcaaattaacaaaaatacacttaatctaattttatcctaccttgtttta |
44186502 |
T |
 |
| Q |
104 |
agcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaag |
203 |
Q |
| |
|
| |||||||| |||| |||||||||| |||||| ||||||||||||||||||||||| || | |||||||||||||| |||| |
|
|
| T |
44186501 |
aatgtaacaccccaca----------------actatcacatgatatcaacaactctgtttgcatgttaaagatgccaatgataaaatagtacctctaag |
44186418 |
T |
 |
| Q |
204 |
tccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| || |||||||||||||||||||| |
|
|
| T |
44186417 |
tctaagatgttgcaagcattactaga |
44186392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #53
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 11835695 - 11835562
Alignment:
| Q |
37 |
catagtatcatcaactcatcagattaacacgactacacttaatctaat-tttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaag |
135 |
Q |
| |
|
|||||||||||||| | |||| ||||||| | ||||||||||||||| |||||| ||||||||| |||| |||||| | ||||||||||||| ||||| |
|
|
| T |
11835695 |
catagtatcatcaatttatcatattaacaaaaatacacttaatctaatatttatcctaccttgttttaagtgtaacaacctacaaagtgtaacaattaag |
11835596 |
T |
 |
| Q |
136 |
actatcacataatatcataaactctgtttgcatg |
169 |
Q |
| |
|
|||||||||| ||||||| |||||| |||||||| |
|
|
| T |
11835595 |
actatcacatgatatcatcaactctatttgcatg |
11835562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #54
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 40936165 - 40936274
Alignment:
| Q |
120 |
aagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaag |
219 |
Q |
| |
|
|||||||||||||||||||||||||| |||| | ||||| ||||||||||||||||| || || |||||||||||| || ||||| || |||||||||| |
|
|
| T |
40936165 |
aagtgtaacacttaagactatcacatgatattagcaactccgtttgcatgttaaagatgccaacgataaaatagtacatgcaagtctaagatgttgcaag |
40936264 |
T |
 |
| Q |
220 |
cattactaga |
229 |
Q |
| |
|
|||||||||| |
|
|
| T |
40936265 |
cattactaga |
40936274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #55
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 11357138 - 11357030
Alignment:
| Q |
116 |
cacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttg |
215 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||| ||||||| ||| |||||||| || || | ||||||||||| ||||||||||| |||||| |
|
|
| T |
11357138 |
cacaaagtgtaacactcaagactatcatataatatcatcaactctggttgtatgttaaatatgccaatgataaaatagtatttgtaagtccaagatgttg |
11357039 |
T |
 |
| Q |
216 |
caagcatta |
224 |
Q |
| |
|
||||||||| |
|
|
| T |
11357038 |
caagcatta |
11357030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 40936068 - 40936153
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatc |
90 |
Q |
| |
|
||||| |||| |||||||||||||||| | |||||||||||||| | |||||||||||||| || |||||||||| |||||||||| |
|
|
| T |
40936068 |
tgtttatacagtgacatcaaaagttcagtcctcatagtatcatctattcatcagattaacaagaatacacttaatataattttatc |
40936153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #57
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 50475021 - 50475112
Alignment:
| Q |
138 |
tatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| |||||||||| || ||||||||||| |||||||| | | |||||||| ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
50475021 |
tatcatataatatcatcaaatctgtttgcatattaaagatgtcaaggataaaataatacttgtaagtccaagatgttgcaagcattactaga |
50475112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 53811701 - 53811609
Alignment:
| Q |
133 |
aagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||||||||||| || || |||||||| ||| |||||||||| |||||||| ||||| ||||| |
|
|
| T |
53811701 |
aagactatcacataatatcatcaact----ttgcatgttaaagataccaacgataaaataatactcgtaagtccaagatgttgcaggcattcctaga |
53811609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0291 (Bit Score: 165; Significance: 4e-88; HSPs: 1)
Name: scaffold0291
Description:
Target: scaffold0291; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 7969 - 8197
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| || |||| | |
|
|
| T |
7969 |
ccactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaacttgct |
8068 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| || |||||||||||| ||| |
|
|
| T |
8069 |
ataagcgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaacgttgttcgcatgttaaagattccaacgataaaatagtacatgt |
8168 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
8169 |
aagtccaagatgttgcaagcattactaga |
8197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 161; Significance: 1e-85; HSPs: 42)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 19289440 - 19289216
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
19289440 |
tgtttgtacaatgacatcaaaagttaagttctcacagtatcatcaactcatcagattaataagactacacttaatctaattttatcctacattgttataa |
19289341 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
19289340 |
atgtaacatcccacaaagtgtaacacttaagactatcacataatatcatcaactctgtgtgcatgttaaagattccgacaataaaataatacctgtaagt |
19289241 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| || ||||||||||||||||| |
|
|
| T |
19289240 |
ccaagatattgcaagcattactaga |
19289216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 43648365 - 43648138
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
43648365 |
cactgtttgtataatgacatcaaaagttcagtcatcatagtatcatcaactcatcagattaacaagactacacttaatctaattttatcataccttgtta |
43648266 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| | || ||||||||| || |||| |
|
|
| T |
43648265 |
taagtgtaacaccacacaaagtataacacttaagactatcacataatatcatcaactttgtttccatgttaaagatttcaacgataaaatagcacttgta |
43648166 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||| |||| |||||||||| |
|
|
| T |
43648165 |
agtccaagatgtcgcaaacattactaga |
43648138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 3 - 229
Target Start/End: Original strand, 3177023 - 3177249
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||||||||| |||||||| ||| | || ||||||||||||||||||||||||||||||| | |
|
|
| T |
3177023 |
actgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagactaagaagaatacacttaatctaattttatcttaccttgtttt |
3177122 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | || |||||||||||| ||||| |
|
|
| T |
3177123 |
aagtgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactatgtttgcatgttaaagatgtcaactataaaatagtacatgtaa |
3177222 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| || || |||||||||||||| |
|
|
| T |
3177223 |
gtccaagatattacaagcattactaga |
3177249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 33551107 - 33550880
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| ||||| |
|
|
| T |
33551107 |
ccactgtttgtacaatgacatcaaaagttcggtcttcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctacgttgtt |
33551008 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||| | || |||||||||||| || |
|
|
| T |
33551007 |
ttaagcgtaacaccccacaaagtgtaacacttaagacta-cgtataatatcatcaactatgtttgcatgttaaagatttcaacgataaaatagtacttga |
33550909 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
33550908 |
aagtccaatatgttgcaagcattactaga |
33550880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 37905790 - 37906017
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
37905790 |
ccaccgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgtt |
37905889 |
T |
 |
| Q |
101 |
ataagcgtaaca--cctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacct |
198 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| | |||||||| || | |
|
|
| T |
37905890 |
ataagcgtaacaccccccacaaagtgtaacacttaaaactatcgcataatatcattaactctgtttgcatgttaaagattccaatgataaaataacacat |
37905989 |
T |
 |
| Q |
199 |
gtaagtccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||||||||| |||||||||| |||||| |
|
|
| T |
37905990 |
gtaagtccaagatgttgcaagaattact |
37906017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 17071852 - 17071646
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagc |
106 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||| || ||||| |
|
|
| T |
17071852 |
tttgtacaatgacatcaaaagttcggtattcatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttattttaagc |
17071753 |
T |
 |
| Q |
107 |
gtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc |
206 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||| || |||||||||||||||||| ||| |
|
|
| T |
17071752 |
gtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaaatttgtttgcatgttaaagattccaacgataaaatagtacctgtaaatcc |
17071653 |
T |
 |
| Q |
207 |
aaaatgt |
213 |
Q |
| |
|
|| |||| |
|
|
| T |
17071652 |
aagatgt |
17071646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 4763713 - 4763940
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||| |||||||| ||||| |||||||||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
4763713 |
ccactgtttgtacagtgacatcaaaagttcagttcccatagtataatcaattcatcagattaacaaaactacacttaatctaattttattctaccttgtt |
4763812 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| ||| |||| |||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| | || |||||||||||||||| |
|
|
| T |
4763813 |
tcaagtgtagcaccccacaaagtgtaacacttaagactatcacataatatcatcaattctttttgcatgttaaagatgctaacgataaaatagtacctgt |
4763912 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactag |
228 |
Q |
| |
|
|||||||| || |||||||||||||||| |
|
|
| T |
4763913 |
aagtccaagatattgcaagcattactag |
4763940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 11366501 - 11366274
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||| |||||| |||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||| ||||| |||||||||| || |||||| |
|
|
| T |
11366501 |
cactatttgtataatgacatcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacatttaatataattttatcatatcttgttc |
11366402 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
||| | ||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | || ||||||||||||||||| |
|
|
| T |
11366401 |
taaacataacaccctacaaagtgtaacacttaagactatcacataatatcatcaactctatttgcatgttaaagatttcaacgataaaatagtacctgta |
11366302 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||| |||||||||||||||||||| |
|
|
| T |
11366301 |
agtccaagatgttgcaagcattactaga |
11366274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 41960939 - 41961150
Alignment:
| Q |
18 |
acatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctca |
117 |
Q |
| |
|
|||||||||||||| | | |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| ||| |||||||| || |
|
|
| T |
41960939 |
acatcaaaagttcagtccacatagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgtttcaagtgtaacacccca |
41961038 |
T |
 |
| Q |
118 |
caaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgca |
217 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||| || || |||||||| ||||||||||||||| |||||||| |
|
|
| T |
41961039 |
caaagtgtaacacttaagattatcacataatatcatcaaatcggtttgcatgttaaagatgccaacgataaaataatacctgtaagtccaagatgttgca |
41961138 |
T |
 |
| Q |
218 |
agcattactaga |
229 |
Q |
| |
|
|||||||||||| |
|
|
| T |
41961139 |
agcattactaga |
41961150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 16 - 224
Target Start/End: Original strand, 45327817 - 45328025
Alignment:
| Q |
16 |
tgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacct |
115 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| ||||||||| |||| ||||||||| |
|
|
| T |
45327817 |
tgacatcaaaagttcagtcatcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcctaccttgttttaagtgtaacacct |
45327916 |
T |
 |
| Q |
116 |
cacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttg |
215 |
Q |
| |
|
|| |||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| | || |||||||||||| ||||||||||| |||||| |
|
|
| T |
45327917 |
cagaaagtgtaacacataagactatcgcataatatcataaactatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaagatgttg |
45328016 |
T |
 |
| Q |
216 |
caagcatta |
224 |
Q |
| |
|
||||||||| |
|
|
| T |
45328017 |
caagcatta |
45328025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 44913748 - 44913974
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctc-atagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttata |
103 |
Q |
| |
|
|||||||| |||||||| ||||||||||| | | ||||||||||||| |||||||| ||||| || ||||||||||||||||||||| ||| ||||| || |
|
|
| T |
44913748 |
tgtttgtaaaatgacataaaaagttcaatcccccatagtatcatcaattcatcagactaacaagaatacacttaatctaattttatcatacattgtttta |
44913847 |
T |
 |
| Q |
104 |
agcgtaacacctc-acaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
|| |||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||| ||||| |
|
|
| T |
44913848 |
agtgtaacacccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaa |
44913947 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| ||||||||||||||| |||| |
|
|
| T |
44913948 |
gtccaagatgttgcaagcattattaga |
44913974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 2325487 - 2325271
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||| || ||||||||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| || ||| |
|
|
| T |
2325487 |
tgtttgtacactggcatcaaaagttcagtcctcatagtatcatcaa--------attaacaagactacacttaatctaattttatcctaccttattttaa |
2325396 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||| | || |||||||||||||||||| | |
|
|
| T |
2325395 |
gcgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaaatttgtttgcatgttaaagattacaacgataaaatagtacctgtaaat |
2325296 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
2325295 |
ccaagatgttgcaagcattactaga |
2325271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 38 - 229
Target Start/End: Original strand, 31861971 - 31862162
Alignment:
| Q |
38 |
atagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagac |
137 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
31861971 |
atagtatcatcaattcatcagattaacaagactacacttaatctaattttaacatacattgttataagcgtaacaccccacaaagtgtaacacttaaaat |
31862070 |
T |
 |
| Q |
138 |
tatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||| |||||||||||||||||||||| ||||||||||| || ||| | |||||||||| |
|
|
| T |
31862071 |
tatcacataatatcatcaagtctgtttgcatgttaaggattccgacaataaaatagtacttgtaagtccaagatattgtagacattactaga |
31862162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 5 - 213
Target Start/End: Complemental strand, 17054213 - 17054005
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
|||||||||||||||||||||||| | | ||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||| |||||| || ||| |
|
|
| T |
17054213 |
tgtttgtacaatgacatcaaaagtncggtattcataatatcatcaattcatcagattaacaagaccacacttaatctaattttatcctaccttattttaa |
17054114 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||||||||||||| || | |||||||||||||||| |||| || |||||||||||||||||| | |
|
|
| T |
17054113 |
gcgtaacaccccacaaagtgtaacacttaanactatcacataatatcatcaaatttgtttgcatgttaaaggttccaacgataaaatagtacctgtaaat |
17054014 |
T |
 |
| Q |
205 |
ccaaaatgt |
213 |
Q |
| |
|
|||| |||| |
|
|
| T |
17054013 |
ccaagatgt |
17054005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 4167004 - 4167229
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | | |||||||||| ||| |||||||| ||||| || |||| |||||||||||||||| ||||||||| |
|
|
| T |
4167004 |
ccactgtttgtacaatggcatcaaaagttcagtccccatagtatcaacaattcatcagactaacaagaatacatttaatctaattttatcctaccttgtt |
4167103 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||| | || |||||||| || ||| |
|
|
| T |
4167104 |
ttaagtgtaacaccccacaaagtgtaacacttaaaactatcacataatatcatcaactatgtttgtatgttaaagatgtcaacgataaaataatatttgt |
4167203 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||||||| ||||||||||||||||| |
|
|
| T |
4167204 |
aagtccaagatgttgcaagcattact |
4167229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 4264198 - 4263969
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | |||||||| ||||| |||||| ||||| | || ||||||||||||||||||||| ||||||||| |
|
|
| T |
4264198 |
ccactgtttgtacagtgacatcaaaagttcagtctccatagtattatcaattcatcatattaagaagaatacacttaatctaattttatcctaccttgtt |
4264099 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatc-acataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| || ||||||||||||||| | |
|
|
| T |
4264098 |
ttaagtttaacaccccacaaagtgtaacacttaagactatcaacatgatatcagcaactctgtttgcatgttaaagatgccaacaataaaatagtacata |
4263999 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| ||| |||||||||||||||||||| |
|
|
| T |
4263998 |
taagttcaagatgttgcaagcattactaga |
4263969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 36642069 - 36642293
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaatttt--atcttaccttgt |
99 |
Q |
| |
|
||||||||||||| |||||||||||||||| | |||||||||||||||| |||||| ||||||| || |||||||||||||||||| ||| |||||||| |
|
|
| T |
36642069 |
cactgtttgtacagtgacatcaaaagttcagtcctcatagtatcatcaattcatcaaattaacaagaatacacttaatctaattttttatcctaccttgt |
36642168 |
T |
 |
| Q |
100 |
tataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
| |||| |||||||| ||||||||||||||||||||||||||||| ||| || |||||||||| |||||||||||| || || ||||||||||||| | |
|
|
| T |
36642169 |
tttaagtgtaacaccctacaaagtgtaacacttaagactatcacatgataccagcaactctgtttccatgttaaagatgccaacgataaaatagtaccgg |
36642268 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcatta |
224 |
Q |
| |
|
||||| ||| ||||||||||||||| |
|
|
| T |
36642269 |
taagttcaagatgttgcaagcatta |
36642293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 29242259 - 29242052
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || |||||||||||| | ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
29242259 |
ccactgtttgtacagtggtatcaaaagttcagtcttcatagtatcatcaattcatcagattaacaaaactacacttaatctaattttatcctaccttgtt |
29242160 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||| | || ||| |||||||||||| |
|
|
| T |
29242159 |
ttaagtgtaacaccccacaaagtgtaacacctaagactatcacataatatcatcaactctggttgtatgttaaagatgtcaacgatacaatagtacctgt |
29242060 |
T |
 |
| Q |
201 |
aagtccaa |
208 |
Q |
| |
|
|||||||| |
|
|
| T |
29242059 |
aagtccaa |
29242052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 31570840 - 31570627
Alignment:
| Q |
16 |
tgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacct |
115 |
Q |
| |
|
|||||||||||||||| | | ||||||||||| || |||||||||||||| || ||||||||||||||||||||||||| ||||| |||| |||||||| |
|
|
| T |
31570840 |
tgacatcaaaagttcagtccacatagtatcatgaattcatcagattaacaagaatacacttaatctaattttatcttacattgttttaagtgtaacaccc |
31570741 |
T |
 |
| Q |
116 |
cacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttg |
215 |
Q |
| |
|
|||||| |||||||||||||||| |||||| |||||| |||||||||| |||||||||||| || || |||||||||||| ||||||| || |||||| |
|
|
| T |
31570740 |
cacaaaatgtaacacttaagactgtcacatgatatcaacaactctgtttacatgttaaagatgccaacgataaaatagtacttgtaagtttaagatgttg |
31570641 |
T |
 |
| Q |
216 |
caagcattactaga |
229 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
31570640 |
caagcattgctaga |
31570627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 33709353 - 33709125
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||| ||||| |||||||||||||||| | | |||||||||||||| | ||||||||||| || ||| ||||||||||||||||| ||||||||| |
|
|
| T |
33709353 |
ccactgttagtacagtgacatcaaaagttcagtccccatagtatcatcaaatattcagattaacaagaatacgcttaatctaattttatcctaccttgtt |
33709254 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||| | | |||||||||||| ||| |
|
|
| T |
33709253 |
ttaagtgtaacaccctacaaagtgtcacacttaagactatcgcatgatatcagcaactctgtttgcatgttaaagatgtcaatgataaaatagtacttgt |
33709154 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| ||||| |||||||||||||||||||| |
|
|
| T |
33709153 |
aaatccaagatgttgcaagcattactaga |
33709125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 39167483 - 39167262
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||| ||||| || |||||||| ||||||||||| ||||||||| |
|
|
| T |
39167483 |
cactgtttgtacaatgacatcaaaagttcagtcctcatagtatcatcaattcattagagtaacaagaatacacttattctaattttattataccttgttt |
39167384 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||| | |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| | || |||||||||||| |||| |
|
|
| T |
39167383 |
taagtgtaacatcccacaaagtgtaaca------actatcacataatatcatcaactctgtttgtatgttaaagatgtcaacgataaaatagtacatgta |
39167290 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||| |||||||||||| |
|
|
| T |
39167289 |
agtccaaattgttgctagcattactaga |
39167262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 18494385 - 18494174
Alignment:
| Q |
17 |
gacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctc |
116 |
Q |
| |
|
||||||||||||||| | |||||||||||||||| |||||||||| || || ||||||| ||||||||||||| |||||||| |||| |||| ||||| |
|
|
| T |
18494385 |
gacatcaaaagttcagtcctcatagtatcatcaattcatcagattcactagaatacacttgatctaattttatcctaccttgtattaagtgtaa-acctc |
18494287 |
T |
 |
| Q |
117 |
acaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgc |
216 |
Q |
| |
|
|||||| || ||||||||||||||||||| |||||| |||||||||||||||||||||| || || |||||||||||| ||||||||||| |||||| |
|
|
| T |
18494286 |
acaaagagtcacacttaagactatcacatgatatcaacgactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgt |
18494187 |
T |
 |
| Q |
217 |
aagcattactaga |
229 |
Q |
| |
|
||||||||||||| |
|
|
| T |
18494186 |
aagcattactaga |
18494174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 26357659 - 26357887
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||| |||| | ||||| |||||| ||||||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
26357659 |
ccactgtttgtacagtgacatcaaaagttcagttcttatagagttatcaattcatcatattaacaagatcacacttaatctaattttatcctaccttgtt |
26357758 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||| |||||| | |||||| |||||||||||| ||||||||||||||| || || | |||||||||||||||||| || || ||||||||||| | | |
|
|
| T |
26357759 |
tcaagtgtaacatcccacaaattgtaacacttaaaactatcacataatattatcaaatgtgtttgcatgttaaagatgccaacgataaaatagtattttt |
26357858 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
26357859 |
aagtccaagatgttgcaagcattactaga |
26357887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 4478455 - 4478675
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttaccttgttata |
103 |
Q |
| |
|
|||||||||| || ||||||||||| | | |||||||||||||||| |||||||||||||| || |||||||||||||||||| ||| ||||||||| || |
|
|
| T |
4478455 |
tgtttgtacagtggcatcaaaagtttagtcctcatagtatcatcaattcatcagattaacaagaatacacttaatctaatttttatcctaccttgtttta |
4478554 |
T |
 |
| Q |
104 |
agcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaag |
203 |
Q |
| |
|
|| ||||||| ||||||||||||||||| ||||||||| |||||| |||||||||| |||||||||||| || | ||||||||||| | ||||| |
|
|
| T |
4478555 |
agtgtaacac-----aaagtgtaacacttaagtctatcacatgatatcaccaactctgtttccatgttaaagatgccaatgataaaatagtatcggtaag |
4478649 |
T |
 |
| Q |
204 |
tccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| |||||||||||||||||||| |
|
|
| T |
4478650 |
tccaagatgttgcaagcattactaga |
4478675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 44286032 - 44286253
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||| | || ||||||||||| | | | ||||||||||| || |||||||||||||| | |||||||||||||||||||| ||||||||| |
|
|
| T |
44286032 |
cactgtttgtatagtggcatcaaaagtttagtccacatagtatcataaattcatcagattaacaataatacacttaatctaattttattctaccttgttt |
44286131 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| || | || ||||||||||| ||||| |
|
|
| T |
44286132 |
taagtgtaacaccccacaaagtgtaacacttaagactatcacatgatatcaacaactttgtttgcatgttaaatatgctaacgataaaatagtatctgta |
44286231 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcatt |
223 |
Q |
| |
|
|||| || |||||||||||||| |
|
|
| T |
44286232 |
agtctaagatgttgcaagcatt |
44286253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 229
Target Start/End: Complemental strand, 27350058 - 27349841
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||||| |||||||||||||||| | | | |||||||||||| |||||||||||||| || ||||||||||||||||||||| |||||||| |
|
|
| T |
27350058 |
cactgtttgtacagtgacatcaaaagttcagtcc-cttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatccaaccttgttt |
27349960 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||||| ||||||||||||||| |||||| |||||| ||||||||||||| |||||||||||| || ||||||||||| ||||| |
|
|
| T |
27349959 |
taagtgtaacaccccacaaagtgtaacac---------tcacatgatatcaggaactctgtttgcaagttaaagattccaacgataaaatagtatctgta |
27349869 |
T |
 |
| Q |
202 |
agtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| || |||||||||||||||||||| |
|
|
| T |
27349868 |
agtctaagatgttgcaagcattactaga |
27349841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 20 - 227
Target Start/End: Original strand, 41465602 - 41465809
Alignment:
| Q |
20 |
atcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcaca |
119 |
Q |
| |
|
|||||||||||| | | ||| ||||||||| |||| ||||| ||| |||| ||||||||||||||||| ||||||||| |||| ||||||||||| | |
|
|
| T |
41465602 |
atcaaaagttcagtccctataatatcatcaattcattagattcacaagactgaacttaatctaattttattctaccttgttttaagtgtaacacctcaga |
41465701 |
T |
 |
| Q |
120 |
aagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaag |
219 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| || | |||||||||||||||||| || || |||||||||||| ||||||||||| ||||||||| |
|
|
| T |
41465702 |
aagtgtaacacttaagactatcgcataatatcatcaattatgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtccaagatgttgcaaa |
41465801 |
T |
 |
| Q |
220 |
cattacta |
227 |
Q |
| |
|
|||||||| |
|
|
| T |
41465802 |
cattacta |
41465809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 19424731 - 19424573
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcac |
118 |
Q |
| |
|
||||||||||| | | |||||||||||||||| |||||||||||||| || ||| ||||||||||||||||||||||||||| |||| |||||||| ||| |
|
|
| T |
19424731 |
catcaaaagtttagtcctcatagtatcatcaattcatcagattaacaagaatacgcttaatctaattttatcttaccttgttttaagtgtaacaccccac |
19424632 |
T |
 |
| Q |
119 |
aaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagat |
177 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
19424631 |
aaagtgtaacatttaagactatcacatgatatcagcaactctgtttgcatgttaaagat |
19424573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 45 - 229
Target Start/End: Original strand, 35959023 - 35959202
Alignment:
| Q |
45 |
catcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcaca |
144 |
Q |
| |
|
|||||| |||||| ||||||| |||| |||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
35959023 |
catcaattcatcatattaacaagactgcacttaatataattt-atcctaccttgttataagcgtaacaccccacaaagtgtaacagttaagactatcaca |
35959121 |
T |
 |
| Q |
145 |
taatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||| | || |||||||||||| | |||||| |||||||||||||||||||| |
|
|
| T |
35959122 |
taatatcatcaactatgtttgcatgttaaagatttcaacgataaaatagtac----atgtccaagatgttgcaagcattactaga |
35959202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 33902148 - 33902319
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||| | |||| |||||||||| |||||||||||||| ||||| | |||||| ||||||||| ||||||||| |
|
|
| T |
33902148 |
ccactgtttgtaaaatgacatcaaaagttcagtcctcaaagtatcatcagttcatcagattaacaagactatatttaatcgaattttatcctaccttgtt |
33902247 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgtta |
172 |
Q |
| |
|
|||| ||| |||| ||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||| |
|
|
| T |
33902248 |
ttaagggtagcaccccacaaagtgtaacacttaatagtatcacataatatcattaactctgtttccatgtta |
33902319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 41463970 - 41463795
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||||| || ||||||||||||||| |||||||||||||||| |||||| ||||||| || ||| ||||| |||||||||| ||| ||||| |
|
|
| T |
41463970 |
cactgtttgtacagtggcatcaaaagttcaatcctcatagtatcatcaattcatcatattaacaagaatacttttaatataattttatcatactttgttt |
41463871 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagat |
177 |
Q |
| |
|
||| ||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
41463870 |
taattgtaacacctcacaaaatgtaacatttaagactatcacatgatatcaacaactctgtttgcatgttaaagat |
41463795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 43770960 - 43770741
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||| |||| || ||||||||||||| | | | || ||||||||| |||||||||||||| || || ||||||| |||||||||| | ||||||| |
|
|
| T |
43770960 |
ccactgtttatacagtggcatcaaaagttcagtccccttaatatcatcaattcatcagattaacaagaatatacttaatttaattttatcctgccttgtt |
43770861 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| || |||||||||||||| || | |
|
|
| T |
43770860 |
ttaagtgtaacacctcacaaagtgtaacac---------tcacatgatatcagcaactctgtttgcatgttaaagatgccaacaataaaatagtatcttt |
43770770 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||| |||||||||||||||||||| |
|
|
| T |
43770769 |
aagttcaagatgttgcaagcattactaga |
43770741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 33660487 - 33660270
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
|||||||||||| || ||||||||||||| | ||| |||||||||||| |||| ||||||||| || ||||||||||||||||||||| ||||||||| | |
|
|
| T |
33660487 |
actgtttgtacagtggcatcaaaagttcagtcctcttagtatcatcaattcattagattaacaggaatacacttaatctaattttatcctaccttgtttt |
33660388 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
||| |||||||| ||||||||||||||| ||||| |||||| |||| |||||||||||||||||| | || ||||||||||| |||||| |
|
|
| T |
33660387 |
aagtgtaacaccccacaaagtgtaacac---------ccacatgatatcagcaactttgtttgcatgttaaagatgtcaacgataaaatagtatctgtaa |
33660297 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| | |||||||||||||||||||| |
|
|
| T |
33660296 |
gtctgagatgttgcaagcattactaga |
33660270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 5881621 - 5881839
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||| | | | | |||||||||||| |||||| ||||||| || |||| ||||||||| |||||| ||||||||| |
|
|
| T |
5881621 |
ccactgtttgtacagtgacatcaaaagttgagtccccttagtatcatcaattcatcatattaacaagaatacatttaatctaa-tttatcataccttgtt |
5881719 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||| ||||||||||||||||||| |||||| |||||| || | |||||||||||||||||| | ||||||||||||||| ||| |
|
|
| T |
5881720 |
ttaagtgtaatacctcacaaagtgtaacac---------tcacatgatatcaacaattttgtttgcatgttaaagatgtcaacaataaaatagtacatgt |
5881810 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || |||||||||||||||||||| |
|
|
| T |
5881811 |
aagtctaagatgttgcaagcattactaga |
5881839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #35
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 7007042 - 7006831
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| | ||||||||||| | ||| |||||||||||||| | || ||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
7007042 |
ccactgtttgtacagtagcatcaaaagtttagttcccatagtatcatcaatttataagattaacaagaatacacttaatctaattttatcataccttgtt |
7006943 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||||||||| |||||||| |||||| ||||||||||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
7006942 |
ttaag-----------------tgtaacacttaagaatatcacatgatatcagcaactctgtttgcatgttaaagatgccaacgataaaatagtacttgt |
7006860 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
7006859 |
aagtccaagatgttgcaagcattactaga |
7006831 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #36
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 13711546 - 13711769
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||| ||||||||| |||||||||||||| | | | ||| |||||||||| |||||||||||||| || |||| |||||||||||||||| | ||| |
|
|
| T |
13711546 |
ccacagtttgtacagtgacatcaaaagtttagtccacatggtatcatcaattcatcagattaacaagaatacatttaatctaattttatcat-----gtt |
13711640 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| || ||||| ||| | |||||||||| |||| |||||| |||||||| |||||||||||||| || | |||||||||||||||| |
|
|
| T |
13711641 |
ttaagtgtaacaccccataaagtataatagttaagactatgacatgatatcagcaactctgtatgcatgttaaagatgccagcgataaaatagtacctgt |
13711740 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| || ||||||||| || ||||||| |
|
|
| T |
13711741 |
aagtctaagatgttgcaaacaatactaga |
13711769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #37
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 229
Target Start/End: Original strand, 19313944 - 19314157
Alignment:
| Q |
11 |
tacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaa |
110 |
Q |
| |
|
|||| |||||||||||||||| | || ||||||||||||| |||||||||||||| || ||||||||||| ||||||| | ||||||||| |||| |||| |
|
|
| T |
19313944 |
tacagtgacatcaaaagttcagtcct-atagtatcatcaattcatcagattaacaagaatacacttaatcgaattttaccctaccttgttttaagtgtaa |
19314042 |
T |
 |
| Q |
111 |
cacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg---taagtcca |
207 |
Q |
| |
|
|||| ||||||||||||| |||||||||| |||||| |||| |||||||||||||||||| | | |||||||||||| || |||||| | |
|
|
| T |
19314043 |
caccccacaaagtgtaac-------actatcacatgatatcagcaactatgtttgcatgttaaagatgtcagcgataaaatagtacatgttataagtcta |
19314135 |
T |
 |
| Q |
208 |
aaatgttgcaagcattactaga |
229 |
Q |
| |
|
| |||||||||||||||||||| |
|
|
| T |
19314136 |
agatgttgcaagcattactaga |
19314157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 60 - 205
Target Start/End: Complemental strand, 18258349 - 18258204
Alignment:
| Q |
60 |
ttaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactc |
159 |
Q |
| |
|
|||||| || || |||||||||||||||||| ||| || || |||| |||||||| || ||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
18258349 |
ttaacaagaataaacttaatctaattttatcctacatttttttaagtgtaacaccccataaagtgtaacacttaagactatcacatgatatcagcaactc |
18258250 |
T |
 |
| Q |
160 |
tgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
| |||||||||||||||| || || ||||||||||| ||| ||||| |
|
|
| T |
18258249 |
tctttgcatgttaaagatcccaacgataaaatagtaactgcaagtc |
18258204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 19500921 - 19500808
Alignment:
| Q |
116 |
cacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttg |
215 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| || |||||| ||| |||||||||||| || |||||||||||| ||||| | ||| |||||| |
|
|
| T |
19500921 |
cacaaaatgtaacacttaagactatcacataatattatcaactctatttacatgttaaagatgttaacgataaaatagtacatgtaatttcaagatgttg |
19500822 |
T |
 |
| Q |
216 |
caagcattactaga |
229 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
19500821 |
caagcattactaga |
19500808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 41051308 - 41051263
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaac |
64 |
Q |
| |
|
||||||||||||| | |||||||||||||||| ||||||||||||| |
|
|
| T |
41051308 |
catcaaaagttcagtcctcatagtatcatcaattcatcagattaac |
41051263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 19501823 - 19501773
Alignment:
| Q |
38 |
atagtatcatcaactcatcagattaacacgactacacttaatctaattttat |
89 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
19501823 |
atagtatcatcaattcatcagattaaca-aactacatttaatctaattttat |
19501773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 41051237 - 41051193
Alignment:
| Q |
185 |
ataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||||||| ||| |||||| ||||||| ||||| |
|
|
| T |
41051237 |
ataaaatagtacctgtaagttcaagatgttgtaagcattgctaga |
41051193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 160; Significance: 4e-85; HSPs: 4)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 408526 - 408304
Alignment:
| Q |
6 |
gtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
||||||| ||||| |||||||||||| | ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
408526 |
gtttgtaaaatgaaatcaaaagttcagtcctc-tagtatcatcaattcatcagattaacaagactacacttaatctaattttatcctaccttgttataag |
408428 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtc |
205 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||||||||| |||||||| |
|
|
| T |
408427 |
cgtaacacctcacaaagtggaacacttaagactatcacacaatatcatcaactctgtttgcatgttaaagattccaacgataaaatagtacatgtaagtc |
408328 |
T |
 |
| Q |
206 |
caaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
408327 |
caagatgttgcaagcattactaga |
408304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 216 - 438
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||| ||||| || |||| |||||||||||||||| || ||| || |
|
|
| T |
216 |
ccactgtttgtacaatggcatcaaaagttcagtcctcatagtatcatcaattcatcagactaacaagaatacatttaatctaattttatcctatcttatt |
315 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||| |
|
|
| T |
316 |
ttaagtgtaacaccccataaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagatgccaacgataaaatagtac---- |
411 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
412 |
--gtccaagatgttgcaagcattactaga |
438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 94486 - 94334
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||||| || ||||||||||| | | |||| ||||||||| |||| ||||||||| ||||||||||||| ||||||||| || |||||| |
|
|
| T |
94486 |
ccactgtttgtacagtggcatcaaaagtttggtccccatactatcatcaattcatgagattaacaagactacacttaatttaattttattctagcttgtt |
94387 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcat |
153 |
Q |
| |
|
||| |||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
94386 |
tcaagtgtaacaccccacaaagtgtaacacttaagactattacataatatcat |
94334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 94044 - 93975
Alignment:
| Q |
160 |
tgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||||| | || |||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
94044 |
tgtttgcatgttaaagatgtcaacgataaaatagtacttgtaagtccaagatgttgcaagcattactaga |
93975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 3880039 - 3879813
Alignment:
| Q |
3 |
actgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttat |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||||||| |||||||| ||||| || || ||||| |||||||||||| ||||||||| | |
|
|
| T |
3880039 |
actgtttgtacaatgacatcaaaagttcaatccccatagtatcatcaattcatcagactaacaagaatatacttattctaattttatcctaccttgtttt |
3879940 |
T |
 |
| Q |
103 |
aagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaa |
202 |
Q |
| |
|
|| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||||||| ||||| |
|
|
| T |
3879939 |
aaatgtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaagatgtcaacgataaaatagtacttgtaa |
3879840 |
T |
 |
| Q |
203 |
gtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| |||||||||||||||||||| |
|
|
| T |
3879839 |
gtccaagatgttgcaagcattactaga |
3879813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 6091281 - 6091056
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||||||||||| ||||||||||||| | ||| |||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
6091281 |
tgtttgtacaatgccatcaaaagttcagtactcgtagtatcatcaattcattagattaacaaaactacacttaatctaattttatcataccttgttttaa |
6091182 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacactt-aagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaag |
203 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||||| |
|
|
| T |
6091181 |
gcgtaacacccaacaaagtgtaacacttaaagactatcacataatatcatcaactctgtttgcatattaaagattcaaacgataaaatagtacctgtaag |
6091082 |
T |
 |
| Q |
204 |
tccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
||||| |||||||||||||||||||| |
|
|
| T |
6091081 |
tccaagatgttgcaagcattactaga |
6091056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 1945916 - 1946144
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||||||| || |||||| |||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
1945916 |
ccactgtttgtagaatgacatcaaaagttcagccctcatagtatcatgaattcatcaagttaacaagactacacttaatataattttatcataccttgtt |
1946015 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||| ||| |
|
|
| T |
1946016 |
ctaagcgtaacaccctacaaagtgtaacacttaagactatcacataatatcatcaactctatttgcatgttaaagattccaacgataaaatagtacatgt |
1946115 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||| ||||||||| |||| |
|
|
| T |
1946116 |
aagtccaagatgttacaagcattattaga |
1946144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 5627473 - 5627700
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||| |||||||||||||||||| |||||||||| ||||| ||||||| |||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
5627473 |
ccactatttgtagaatgacatcaaaagttcagccctcatagtattatcaattcatcaggttaacaagactacacttaatataattttatcataccttgtt |
5627572 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
||||| ||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||| | || |||||||||||||||| |
|
|
| T |
5627573 |
ctaagcataacaccctacaaagtgtaatacttaagactatcacataatatcatcaactctatttgcatgttaaagatttcaacgataaaatagtacctgt |
5627672 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactag |
228 |
Q |
| |
|
|||||||| ||||||||||||||||||| |
|
|
| T |
5627673 |
aagtccaagatgttgcaagcattactag |
5627700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 7235136 - 7234909
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||||||| || ||||||||||||| | |||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
7235136 |
ccactgtttgtacggtgccatcaaaagttcagt-ctcatagtattatcaattcatcagattaacaagactgcacttaatctaattttatcctaccttgtt |
7235038 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|||| |||||||| || |||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||| || || || |||||||||||| ||| |
|
|
| T |
7235037 |
ttaagtgtaacaccccagaaagtgtaacgcttaagactatcgcataatatcatcaactatgtttgcatgttaaaaatgccaacgataaaatagtacatgt |
7234938 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| ||||||||| |||||||||| |
|
|
| T |
7234937 |
aagtccaagatgttgcaaacattactaga |
7234909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 4318925 - 4318696
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttaccttgt |
99 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| | |||||||||||||| |||| ||||||||| || |||||||||||||||||| ||| |||||||| |
|
|
| T |
4318925 |
ccactgtttgtacagtgacatcaaaagttcaacccccatagtatcatcaattcattagattaacaagaatacacttaatctaatttttatcctaccttgt |
4318826 |
T |
 |
| Q |
100 |
tataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
| |||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||| | || || ||||||||| | |
|
|
| T |
4318825 |
tttaagtgtaacaccctataaagtgtaacacttaagactatcacatgatatcagcaactctgttttcatgttaaagatgtcaacgatgaaatagtacggg |
4318726 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
4318725 |
aaagtccaagatgttgcaagcattactaga |
4318696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 21017208 - 21016992
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagc |
106 |
Q |
| |
|
||||||||||| ||||||||||||| | | |||||||||||||| |||||||| ||||| || || |||||||||||||||||| ||| || || |||| |
|
|
| T |
21017208 |
tttgtacaatggcatcaaaagttcagtccccatagtatcatcaattcatcagactaacaagaataaacttaatctaattttatcctacgttattttaagt |
21017109 |
T |
 |
| Q |
107 |
gtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc |
206 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || | || |||||||||||| ||| |
|
|
| T |
21017108 |
gtaacaccccacaaagtgtaacacttaagactatcacataatatcatcaactctgtttgcatgttaaatatgtcaacgataaaatagtac------gtct |
21017015 |
T |
 |
| Q |
207 |
aaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
21017014 |
aagatgttgcaagcattactaga |
21016992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 8513315 - 8513538
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttaccttgt |
99 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | | |||| ||||||||| |||||| ||||||| || ||||||| |||||||||| ||| |||||||| |
|
|
| T |
8513315 |
ccactgtttgtacagtgacatcaaaagttcagtccccataatatcatcaattcatcatattaacaagaatacacttgatctaatttttatcctaccttgt |
8513414 |
T |
 |
| Q |
100 |
tataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
| ||| |||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||| || | ||||||||||||| | |
|
|
| T |
8513415 |
tttaa------caccctacaaagtgtaacacttaagactatcacatgatatcagcaactctgtttccatgttaaagatgccaatgataaaatagtaccgg |
8513508 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |
|
|
| T |
8513509 |
taagtccaaaatcttgcaagcattactaga |
8513538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 7055316 - 7055141
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
|||| |||||| |||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
7055316 |
cactatttgtagaatgacatcaaaagttcagccctcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatcataccttgttc |
7055217 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagat |
177 |
Q |
| |
|
|||| ||||||| |||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||| |
|
|
| T |
7055216 |
taagtgtaacacgctacaaagtgtaacacttaaaactatcacataatatcatcaactctatttggatgttaaagat |
7055141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29182245 - 29182474
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||||||| |||| || ||||||||||||| | |||| ||||||||| |||||||||||| | || ||||||||||||||||||||| |||| | || |
|
|
| T |
29182245 |
ccactgtttatacagtgtcatcaaaagttcagtctccatattatcatcaattcatcagattaataagaatacacttaatctaattttatcctaccatatt |
29182344 |
T |
 |
| Q |
101 |
ataagcgtaacacctc-acaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
|||| |||||||| | | ||||||||||||||||||||||||||| |||||| |||||| |||||| ||||||||| || || |||||||||||| || |
|
|
| T |
29182345 |
ttaagtgtaacacccccataaagtgtaacacttaagactatcacatgatatcagcaactctatttgcaggttaaagatgccaacgataaaatagtacttg |
29182444 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||||| || |||||||||| ||||||||| |
|
|
| T |
29182445 |
taagtctaagatgttgcaagtattactaga |
29182474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 20768184 - 20768392
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcac |
118 |
Q |
| |
|
||||||||||||| | ||||||||||||| || |||||||||||||| || ||| |||||||||||||||| ||| ||||| |||| |||||| | || |
|
|
| T |
20768184 |
catcaaaagttcagtcctcatagtatcattaattcatcagattaacaagattac--ttaatctaattttatcctactttgttttaagtgtaacatcccat |
20768281 |
T |
 |
| Q |
119 |
aaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaa |
218 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||| || | |||||||||||||||||| | || |||||||||||| ||||||||||| |||||||| |
|
|
| T |
20768282 |
aaagtgtaacacttaagatcatcgcataatatcatcaattatgtttgcatgttaaagatgtcaacgataaaatagtacatgtaagtccaaggtgttgcaa |
20768381 |
T |
 |
| Q |
219 |
gcattactaga |
229 |
Q |
| |
|
||||||||||| |
|
|
| T |
20768382 |
gcattactaga |
20768392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 30353459 - 30353256
Alignment:
| Q |
2 |
cactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtta |
101 |
Q |
| |
|
||||||||||||| || |||| | |||||| | |||||||||||||| |||||| || |||| || ||||||||||||||||||||| | ||||||| |
|
|
| T |
30353459 |
cactgtttgtacagtggcatcgatagttcagtctccatagtatcatcaattcatcatataaacaagaatacacttaatctaattttatcatgccttgttt |
30353360 |
T |
 |
| Q |
102 |
taagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgta |
201 |
Q |
| |
|
|||| |||||| | |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || | || |||||||||||| |||| |
|
|
| T |
30353359 |
taagtgtaacatcccacaaagtgtaacacttaagactatcacatgatatcagcaactctgtttgcatgttaaaaatgtcaacgataaaatagtacatgta |
30353260 |
T |
 |
| Q |
202 |
agtc |
205 |
Q |
| |
|
|||| |
|
|
| T |
30353259 |
agtc |
30353256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 33893104 - 33892888
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||||||||| || ||||||||| | | | |||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
33893104 |
ccactatttgtacaatgatattaaaagttcagtcc-cttagtatcatcaattcatcagattaacaagaatacacttaatctaattttatcctaccttgtt |
33893006 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgt |
200 |
Q |
| |
|
|| | ||||||| ||||||||||||||| |||||| |||||| ||||| ||||||||||||||||| || ||||||||||||||| ||| |
|
|
| T |
33893005 |
ttatgtataacaccccacaaagtgtaacac---------tcacatgatatcagcaactcagtttgcatgttaaagatgccaacaataaaatagtacatgt |
33892915 |
T |
 |
| Q |
201 |
aagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||||||| ||||||||| |||||||| |
|
|
| T |
33892914 |
aagtccaagatgttgcaaacattacta |
33892888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 6088990 - 6089211
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaatttt-atcttaccttgt |
99 |
Q |
| |
|
|||||||||||| | || ||||||||||||| | |||||||||||||| |||||||||||||| || || ||| |||||||||| ||| |||||||| |
|
|
| T |
6088990 |
ccactgtttgtaaagtggcatcaaaagttcagtcaccatagtatcatcaattcatcagattaacaagaatatccttgatctaatttttatcctaccttgt |
6089089 |
T |
 |
| Q |
100 |
tataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctg |
199 |
Q |
| |
|
| ||| ||| |||| || ||||||||||||||||||||| |||||| |||||||||| |||||||||||| || || ||||||||||||| | |
|
|
| T |
6089090 |
tttaa------cactctacaaggtataacacttaagactatcacatgatatcagcaactctgtttccatgttaaagatgccaacgataaaatagtaccag |
6089183 |
T |
 |
| Q |
200 |
taagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
6089184 |
taagtccaaaatgttgcaagcattacta |
6089211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 15491697 - 15491873
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgtt |
100 |
Q |
| |
|
||||| |||||||| || ||||||||||||| |||||||||||||||| |||||||||||||| || | ||||||||||||||||||| |||||| || |
|
|
| T |
15491697 |
ccactatttgtacagtggcatcaaaagttcagccctcatagtatcatcaattcatcagattaacaagaatgcacttaatctaattttatcctaccttatt |
15491796 |
T |
 |
| Q |
101 |
ataagcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagat |
177 |
Q |
| |
|
|||| |||||||| |||||| |||||||||||| | |||||||| |||||| || |||||||| ||||||||||| |
|
|
| T |
15491797 |
ttaagtgtaacaccccacaaaatgtaacacttaaaaatatcacatgatatcagcaattctgtttggatgttaaagat |
15491873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 33618934 - 33619140
Alignment:
| Q |
19 |
catcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcac |
118 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| |||| || |||||||| | |
|
|
| T |
33618934 |
catcaaaagttcagttctcatagtatcatcaattcatcagattaacaagactgcacttaatctaattttatcctacc--------agtgtaacacc-cta |
33619024 |
T |
 |
| Q |
119 |
aaagtgtaacacttaagactatcacataatatcataaactctgtttgcat-----gttaaagattccgacaataaaatagtacctgtaagtccaaaatgt |
213 |
Q |
| |
|
|||||| |||||||||| |||| ||||||||||| |||| ||||||||| ||||||||| || || |||||||||||| ||||||||||| |||| |
|
|
| T |
33619025 |
gaagtgtgacacttaagagtatcgcataatatcatcaactatgtttgcatgttaagttaaagatgccaacgataaaatagtacatgtaagtccaatatgt |
33619124 |
T |
 |
| Q |
214 |
tgcaagcattactaga |
229 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
33619125 |
tgcaagcattactaga |
33619140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 7054704 - 7054649
Alignment:
| Q |
172 |
aaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaagcattacta |
227 |
Q |
| |
|
||||||||| || ||||||||||| |||||||||||| ||||||||| |||||||| |
|
|
| T |
7054704 |
aaagattccaacgataaaatagtaactgtaagtccaagatgttgcaaacattacta |
7054649 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18498516 - 18498565
Alignment:
| Q |
1 |
ccactgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaa |
50 |
Q |
| |
|
|||| ||||||||| || ||||||||||||| | |||||||||||||||| |
|
|
| T |
18498516 |
ccacagtttgtacagtggcatcaaaagttcagtcctcatagtatcatcaa |
18498565 |
T |
 |
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Target: scaffold0022 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 146113 - 145893
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagc |
106 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||| ||||||||| ||||| |
|
|
| T |
146113 |
tttgtagaatgacatcaaaagttcagccttcatagtatcatcaattcatcaggttaacaagactacacttaatataattttatcataccttgttctaagc |
146014 |
T |
 |
| Q |
107 |
gtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtcc |
206 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||| |||||||||| |
|
|
| T |
146013 |
ataacaccctacaaagtgtaacacttaagactatcacataatatcatcaactctatttgcatgttaaagattccaacgataaaatagtgtctgtaagtcc |
145914 |
T |
 |
| Q |
207 |
aaaatgttgcaagcattacta |
227 |
Q |
| |
|
|| |||||||||||||||||| |
|
|
| T |
145913 |
aagatgttgcaagcattacta |
145893 |
T |
 |
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Target: scaffold0061 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 44043 - 44263
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||||||||||| ||| ||||||||| | |||||||||||||||| |||||||||||| | ||||||| ||||| |||||||||| || |||||||||| |
|
|
| T |
44043 |
tgtttgtacaatggcataaaaagttcagtcctcatagtatcatcaattcatcagattaataagactacatttaatataattttatcatatcttgttataa |
44142 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
|| ||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||| | || |||||||||||| ||||||| |
|
|
| T |
44143 |
gcttaacaccccacaaagtgtaacacttaag-ctatcacataatatcatcaactttgtttgcatgttaaagatttcaacgataaaatagtacatgtaagt |
44241 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||| |||||||||||||||| |
|
|
| T |
44242 |
ccaagttgttgcaagcattact |
44263 |
T |
 |
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Target: scaffold0017 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 154744 - 154524
Alignment:
| Q |
5 |
tgtttgtacaatgacatcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataa |
104 |
Q |
| |
|
||||||||||||| ||| ||||||||| | |||||||||||||||| |||||||||||| | ||||||| ||||| |||||||||| || |||||||||| |
|
|
| T |
154744 |
tgtttgtacaatggcataaaaagttcagtcctcatagtatcatcaattcatcagattaataagactacatttaatataattttatcatatcttgttataa |
154645 |
T |
 |
| Q |
105 |
gcgtaacacctcacaaagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
|| ||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||| | || |||||||||||| ||||||| |
|
|
| T |
154644 |
gcttaacaccccacaaagtgtaacacttaag-ctatcacataatatcatcaactttgtttgcatgttaaagatttcaacgataaaatagtacatgtaagt |
154546 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattact |
226 |
Q |
| |
|
|||| |||||||||||||||| |
|
|
| T |
154545 |
ccaagttgttgcaagcattact |
154524 |
T |
 |
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Target: scaffold0318 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0318
Description:
Target: scaffold0318; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 12010 - 12219
Alignment:
| Q |
20 |
atcaaaagttcaattctcatagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataagcgtaacacctcaca |
119 |
Q |
| |
|
|||||||||||| | |||||| ||||||||| |||||||||||||| || ||||||||||||||||||||| || |||||| |||| |||||||| |||| |
|
|
| T |
12010 |
atcaaaagttcagtcctcataatatcatcaattcatcagattaacaagaatacacttaatctaattttatcctatcttgttttaagtgtaacaccccaca |
12109 |
T |
 |
| Q |
120 |
aagtgtaacacttaagactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagtccaaaatgttgcaag |
219 |
Q |
| |
|
|||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||| || || |||||||||||| |||||||| || |||||||||| |
|
|
| T |
12110 |
aagtgtcacacttaagactatcgcatgatatcagcaactctgtttgcatgttaaagatgccaacgataaaatagtacatgtaagtctaagatgttgcaag |
12209 |
T |
 |
| Q |
220 |
cattactaga |
229 |
Q |
| |
|
|||||||||| |
|
|
| T |
12210 |
cattactaga |
12219 |
T |
 |
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Target: scaffold0008 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 267372 - 267595
Alignment:
| Q |
7 |
tttgtacaatgacatcaaaagttcaattctc-atagtatcatcaactcatcagattaacacgactacacttaatctaattttatcttaccttgttataag |
105 |
Q |
| |
|
|||||||| || ||||||||||||| | ||| ||| ||||||||| |||| |||||| || |||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
267372 |
tttgtacagtgtcatcaaaagttcagt-ctctataatatcatcaattcattagattagcaagactacacttaatctaattttatcctaccttgttttaaa |
267470 |
T |
 |
| Q |
106 |
cgtaacacctcacaaagtgtaacacttaa-gactatcacataatatcataaactctgtttgcatgttaaagattccgacaataaaatagtacctgtaagt |
204 |
Q |
| |
|
|||||| | ||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| || || |||||||| ||| ||||||| |
|
|
| T |
267471 |
tgtaacatcccacaaagtgtaacacttaaagactatcacataatatcatcaactttgtttgcatgttaaagatgccaacgataaaataatacatgtaagt |
267570 |
T |
 |
| Q |
205 |
ccaaaatgttgcaagcattactaga |
229 |
Q |
| |
|
|||| ||| |||||| ||||||||| |
|
|
| T |
267571 |
ccaagatgctgcaagaattactaga |
267595 |
T |
 |
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Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 100948 - 100988
Alignment:
| Q |
140 |
tcacataatatcataaactctgtttgcatgttaaagattcc |
180 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
100948 |
tcacataatatcatcaactctgtttgcatgttaaagattcc |
100988 |
T |
 |
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