View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9320_high_15 (Length: 216)
Name: NF9320_high_15
Description: NF9320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9320_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 35071379 - 35071509
Alignment:
| Q |
18 |
aaaccttctcctaacggctggtcttccaatacttccttctgtcaatggtccggcgtcaaatgctcatccgacaaccgcgtcaccagcataaacctctccg |
117 |
Q |
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| T |
35071379 |
aaaccttctcctaacggctggtcttccaatacttccttctgtcaatggtccggcgtcaaatgctcatccgacaaccgcgtcaccagcataaacctctccg |
35071478 |
T |
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| Q |
118 |
atcaaaagcttgccggtacccttcccgataa |
148 |
Q |
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|||||||||| ||||| |||||||||||||| |
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| T |
35071479 |
atcaaaagctcgccggaacccttcccgataa |
35071509 |
T |
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