View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9320_low_39 (Length: 217)

Name: NF9320_low_39
Description: NF9320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9320_low_39
NF9320_low_39
[»] chr3 (32 HSPs)
chr3 (120-200)||(4070843-4070923)
chr3 (120-200)||(42293004-42293084)
chr3 (125-201)||(42528053-42528129)
chr3 (120-190)||(51760508-51760578)
chr3 (120-193)||(6124745-6124818)
chr3 (120-201)||(25999162-25999242)
chr3 (120-200)||(51980759-51980839)
chr3 (133-201)||(52959318-52959386)
chr3 (120-201)||(19274756-19274837)
chr3 (120-201)||(32999649-32999730)
chr3 (120-200)||(12764698-12764778)
chr3 (120-202)||(54463448-54463530)
chr3 (120-201)||(8879390-8879471)
chr3 (120-200)||(50197998-50198078)
chr3 (120-201)||(9558852-9558933)
chr3 (120-201)||(17666828-17666909)
chr3 (133-200)||(30743019-30743086)
chr3 (142-201)||(48051020-48051079)
chr3 (120-202)||(2557894-2557976)
chr3 (120-202)||(35554604-35554686)
chr3 (120-201)||(8321423-8321504)
chr3 (120-201)||(12055507-12055588)
chr3 (120-201)||(30317936-30318017)
chr3 (120-201)||(34435967-34436048)
chr3 (120-201)||(41991676-41991757)
chr3 (120-201)||(43968344-43968425)
chr3 (120-201)||(51062936-51063017)
chr3 (120-201)||(52184819-52184900)
chr3 (128-202)||(40374508-40374582)
chr3 (128-201)||(32111560-32111633)
chr3 (120-201)||(36237862-36237943)
chr3 (133-201)||(12122179-12122247)
[»] chr5 (32 HSPs)
chr5 (120-201)||(2890966-2891047)
chr5 (120-201)||(7157490-7157571)
chr5 (120-201)||(35766585-35766666)
chr5 (120-201)||(17645332-17645413)
chr5 (120-199)||(5102695-5102774)
chr5 (120-199)||(13359473-13359552)
chr5 (120-201)||(6789606-6789687)
chr5 (120-201)||(12280807-12280888)
chr5 (120-201)||(25881533-25881614)
chr5 (120-201)||(35638790-35638871)
chr5 (142-201)||(5050116-5050175)
chr5 (147-201)||(36944259-36944313)
chr5 (120-201)||(15498671-15498752)
chr5 (120-201)||(16218300-16218381)
chr5 (120-201)||(17540287-17540368)
chr5 (120-201)||(24171391-24171472)
chr5 (120-201)||(29525313-29525394)
chr5 (120-201)||(36761088-36761169)
chr5 (120-201)||(37530737-37530818)
chr5 (120-201)||(41734261-41734342)
chr5 (120-201)||(42709337-42709418)
chr5 (128-193)||(13019028-13019093)
chr5 (131-200)||(20768871-20768940)
chr5 (120-201)||(76440-76521)
chr5 (120-181)||(3703498-3703559)
chr5 (128-201)||(7615002-7615075)
chr5 (120-201)||(10815089-10815170)
chr5 (120-201)||(12953824-12953905)
chr5 (120-181)||(24463563-24463624)
chr5 (120-201)||(27812993-27813074)
chr5 (120-201)||(34589918-34589999)
chr5 (128-180)||(3749366-3749418)
[»] chr7 (31 HSPs)
chr7 (120-200)||(42997541-42997621)
chr7 (120-200)||(3370476-3370556)
chr7 (120-201)||(21920788-21920869)
chr7 (120-201)||(30523946-30524027)
chr7 (120-201)||(46534434-46534515)
chr7 (120-180)||(43158184-43158244)
chr7 (131-201)||(28235311-28235381)
chr7 (120-201)||(981363-981444)
chr7 (129-201)||(6476952-6477024)
chr7 (120-201)||(25696059-25696140)
chr7 (120-201)||(46349876-46349957)
chr7 (120-186)||(42980871-42980937)
chr7 (120-201)||(28958114-28958195)
chr7 (133-201)||(4060378-4060446)
chr7 (129-181)||(47479832-47479884)
chr7 (120-201)||(14792109-14792190)
chr7 (120-201)||(27826735-27826816)
chr7 (120-201)||(28494268-28494349)
chr7 (120-201)||(29994208-29994289)
chr7 (128-201)||(40061189-40061262)
chr7 (120-201)||(42265265-42265346)
chr7 (120-201)||(42329015-42329096)
chr7 (129-201)||(43468011-43468083)
chr7 (133-200)||(31031899-31031966)
chr7 (128-201)||(37658115-37658188)
chr7 (128-201)||(39870021-39870094)
chr7 (128-200)||(9806589-9806661)
chr7 (120-201)||(35647442-35647523)
chr7 (120-193)||(46672540-46672613)
chr7 (133-193)||(42328169-42328229)
chr7 (120-200)||(46615671-46615751)
[»] chr4 (32 HSPs)
chr4 (120-201)||(53431656-53431737)
chr4 (120-193)||(30653283-30653356)
chr4 (120-201)||(51941129-51941210)
chr4 (129-201)||(24152702-24152774)
chr4 (120-200)||(25687013-25687093)
chr4 (125-200)||(28778583-28778658)
chr4 (126-193)||(40674782-40674849)
chr4 (120-202)||(37498228-37498310)
chr4 (134-201)||(44525944-44526011)
chr4 (120-201)||(2943644-2943725)
chr4 (120-201)||(47633836-47633917)
chr4 (120-201)||(49335183-49335264)
chr4 (120-202)||(44448472-44448554)
chr4 (120-201)||(6238214-6238295)
chr4 (120-181)||(6287883-6287944)
chr4 (120-201)||(43374621-43374702)
chr4 (120-181)||(54683643-54683704)
chr4 (120-172)||(7141135-7141187)
chr4 (120-201)||(19801855-19801936)
chr4 (120-201)||(33984114-33984195)
chr4 (120-201)||(55001736-55001817)
chr4 (152-201)||(55496061-55496110)
chr4 (133-201)||(39840200-39840268)
chr4 (120-180)||(40685825-40685885)
chr4 (133-201)||(53284033-53284101)
chr4 (146-193)||(52908440-52908487)
chr4 (128-201)||(1771840-1771913)
chr4 (131-200)||(28459639-28459708)
chr4 (128-201)||(30411252-30411325)
chr4 (120-202)||(36181362-36181444)
chr4 (120-201)||(19800952-19801033)
chr4 (133-201)||(32012573-32012641)
[»] chr1 (28 HSPs)
chr1 (120-202)||(44277957-44278039)
chr1 (120-201)||(2459638-2459719)
chr1 (120-201)||(38058775-38058856)
chr1 (120-200)||(28343716-28343796)
chr1 (120-201)||(41865313-41865394)
chr1 (120-201)||(46742482-46742563)
chr1 (120-200)||(11332869-11332949)
chr1 (120-200)||(11490890-11490970)
chr1 (120-200)||(36739580-36739660)
chr1 (131-202)||(9423058-9423129)
chr1 (131-201)||(2937363-2937433)
chr1 (120-202)||(28955547-28955629)
chr1 (120-202)||(38624093-38624175)
chr1 (128-201)||(5698534-5698606)
chr1 (131-200)||(31657103-31657172)
chr1 (120-201)||(46315680-46315761)
chr1 (120-200)||(28314846-28314926)
chr1 (142-201)||(47326598-47326657)
chr1 (131-201)||(25365786-25365856)
chr1 (120-201)||(30358100-30358181)
chr1 (120-201)||(33076631-33076711)
chr1 (120-201)||(39325637-39325718)
chr1 (133-201)||(27747633-27747701)
chr1 (120-200)||(45900196-45900276)
chr1 (133-201)||(50586184-50586252)
chr1 (129-201)||(35179846-35179918)
chr1 (120-201)||(38815541-38815622)
chr1 (128-200)||(42628218-42628290)
[»] scaffold1391 (1 HSPs)
scaffold1391 (120-201)||(1487-1568)
[»] chr8 (29 HSPs)
chr8 (120-201)||(2773575-2773656)
chr8 (120-190)||(41355648-41355718)
chr8 (120-193)||(34903370-34903443)
chr8 (129-201)||(3512497-3512569)
chr8 (120-180)||(7303365-7303425)
chr8 (129-201)||(24804488-24804560)
chr8 (131-202)||(16786534-16786605)
chr8 (118-179)||(16785863-16785924)
chr8 (120-169)||(21266856-21266905)
chr8 (120-201)||(35057293-35057374)
chr8 (120-200)||(284845-284925)
chr8 (120-200)||(630952-631032)
chr8 (120-200)||(816764-816844)
chr8 (118-181)||(16785663-16785726)
chr8 (128-201)||(29051173-29051246)
chr8 (120-201)||(5574628-5574709)
chr8 (120-201)||(22215137-22215218)
chr8 (120-201)||(43800761-43800842)
chr8 (133-201)||(35160275-35160343)
chr8 (133-200)||(17121842-17121909)
chr8 (128-201)||(18146368-18146441)
chr8 (135-193)||(39733760-39733818)
chr8 (128-201)||(40532083-40532156)
chr8 (128-201)||(45069819-45069892)
chr8 (120-201)||(14911791-14911872)
chr8 (120-201)||(20697498-20697579)
chr8 (129-201)||(53472-53543)
chr8 (133-185)||(35398012-35398064)
chr8 (133-201)||(38746962-38747030)
[»] chr6 (12 HSPs)
chr6 (120-201)||(6834038-6834119)
chr6 (120-201)||(25023447-25023528)
chr6 (133-201)||(20645684-20645752)
chr6 (120-200)||(20992257-20992337)
chr6 (120-201)||(18801726-18801807)
chr6 (131-201)||(21459048-21459118)
chr6 (120-201)||(12130507-12130588)
chr6 (120-201)||(24119231-24119312)
chr6 (120-200)||(13756312-13756392)
chr6 (120-192)||(21778078-21778150)
chr6 (128-201)||(18368734-18368807)
chr6 (133-201)||(22707317-22707385)
[»] chr2 (23 HSPs)
chr2 (120-201)||(6432196-6432277)
chr2 (120-200)||(45376936-45377016)
chr2 (120-201)||(10361419-10361500)
chr2 (120-201)||(42097904-42097985)
chr2 (120-200)||(35422070-35422150)
chr2 (120-202)||(43568388-43568470)
chr2 (120-201)||(1876025-1876106)
chr2 (133-201)||(36936078-36936146)
chr2 (128-201)||(39532088-39532161)
chr2 (120-201)||(7454558-7454639)
chr2 (120-193)||(8875707-8875780)
chr2 (120-201)||(12160906-12160987)
chr2 (120-201)||(30523635-30523716)
chr2 (120-201)||(34245272-34245353)
chr2 (120-201)||(39241153-39241234)
chr2 (120-201)||(42519740-42519821)
chr2 (120-200)||(5774120-5774200)
chr2 (120-200)||(14958147-14958227)
chr2 (128-201)||(18109715-18109788)
chr2 (120-166)||(40788756-40788802)
chr2 (131-201)||(43496188-43496258)
chr2 (120-181)||(3147493-3147554)
chr2 (128-200)||(40862204-40862276)
[»] scaffold0007 (1 HSPs)
scaffold0007 (120-201)||(157607-157688)
[»] scaffold0115 (2 HSPs)
scaffold0115 (128-201)||(4175-4248)
scaffold0115 (128-201)||(11915-11988)
[»] scaffold0330 (1 HSPs)
scaffold0330 (120-201)||(7017-7098)
[»] scaffold0076 (1 HSPs)
scaffold0076 (120-201)||(14183-14264)


Alignment Details
Target: chr3 (Bit Score: 65; Significance: 9e-29; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 4070923 - 4070843
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  4070923 ataaactcgtgagaaaagtttattaccaaacacatcacgttttcatccaactaacttataagctagttcaacaaactataa 4070843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 42293084 - 42293004
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  42293084 ataagctcgtgagaaaagcttgttaccaaacacatcacgttttcatccaacgaacttataagctagtccaacaaactataa 42293004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 42528053 - 42528129
Alignment:
Q  125 ctcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  42528053 ctcgtgagaaaaacttgttaccaaacacatcacgttttcatccaacaagcttataagctagtccaacaagctataag 42528129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 51760578 - 51760508
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaa 190  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  51760578 ataagctcgtgagaaaagcttgttaccaaacacatcacgttttcatccaacaagcttataagttaatccaa 51760508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 6124818 - 6124745
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaa 193  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  6124818 ataagctcgtgagaaaagtttgttaccaaacacatcacgttttcatcaaacaagcttataagatagtccaacaa 6124745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 25999162 - 25999242
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||| ||| || |||||||    
T  25999162 ataagctcgtgagaaaagcttgtt-ccaaacacatcacgttttcatccaacaaacttataaattagttcaataagctataag 25999242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 51980839 - 51980759
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||||||| |||||||  ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||||    
T  51980839 ataagctcgtgaaaaaagctcgttaccaaacacatcatgttttcatccaacaagcttataagctagtccaacaagctataa 51980759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 52959386 - 52959318
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||||||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  52959386 aaaagcttgttaccaaacacgtcacgttttcatccaacgagcttataagttaatccaacaaactataag 52959318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 19274837 - 19274756
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| |||||||||||||||| ||||||||||| |||| |||||||||||| | |||||||| || |||||||| |||||||    
T  19274837 ataacctcgtgagaaaagcttgttaccaaacacgtcacattttcatccaacgagcttataagctaatccaacaagctataag 19274756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 32999649 - 32999730
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||| || ||||| || |||||||    
T  32999649 ataagctcatgagaaaagctcgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataag 32999730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 12764778 - 12764698
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||| ||| |||||||| || ||||| || ||||||    
T  12764778 ataagctcatgagaaaagcttgttaccaaacacatcacgttttcatccagcaagcttataagctaatccaaaaagctataa 12764698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 54463448 - 54463530
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||| || |||||||||||||||||    
T  54463448 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataagataatccaacaaactataagt 54463530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 8879471 - 8879390
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||| || ||||||||||||| ||| |||||||||| || ||||||||||||||||    
T  8879471 ataagctcatgaaaaaagcttgttaccaaatacgtcacgttttcatctaacgaacttataagctaatccaacaaactataag 8879390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 50197998 - 50198078
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| |||||||| ||| |||| ||||||||||||||||||||||||||| |||||| ||| |||||  ||||||||    
T  50197998 ataagctcatgagaaaaacttgttactaaacacatcacgttttcatccaacaaatttataaattaatccaattaactataa 50198078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 9558852 - 9558933
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||| ||||||||||| |||||||||| |||||| | |||||||| || || ||||| |||||||    
T  9558852 ataagctcatgagaaaagcttgttaccaaacacgtcacgttttcttccaacgagcttataagctaatctaacaagctataag 9558933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 17666909 - 17666828
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| ||||| || ||||||||||| ||||||||||||||||| | ||||||||||| ||||| || |||||||    
T  17666909 ataagctcatgaaaaaagtttgttaccaaacacgtcacgttttcatccaacgagcttataagttaatccaataagctataag 17666828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 30743019 - 30743086
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||||||| |||||||||||| ||| |||||||| ||| | |||||||| || |||||||||||||||    
T  30743019 aaaagcttgttaccaaacacaccacattttcatctaaccagcttataagctaatccaacaaactataa 30743086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 48051079 - 48051020
Alignment:
Q  142 ttaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||| ||||||||||||| ||| | ||||||||||| |||||||| |||||||    
T  48051079 ttaccaaacacgtcacgttttcatctaacgagcttataagttaatccaacaagctataag 48051020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 2557894 - 2557976
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | ||||||||||| || ||||| ||||||||    
T  2557894 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagttaatcaaacaagctataagt 2557976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 35554686 - 35554604
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||| ||| ||||||||| || ||| ||||||||||| ||||| ||||| ||||||||||| ||| |  ||||||||||||||    
T  35554686 ataatctcatgagaaaagtttgttatcaaacacatcatgttttgatccagcaaacttataaattaatttaacaaactataagt 35554604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 8321423 - 8321504
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  8321423 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 8321504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 12055507 - 12055588
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||  | |||||||| || ||||||||||||||||    
T  12055507 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaaggagcttataagctaatccaacaaactataag 12055588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 30317936 - 30318017
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||| ||| ||| ||||||| ||||||||||||| ||| | |||||||| || ||||||||||||||||    
T  30317936 ataagctcatgaaaaaatcttgttatcaaacacgtcacgttttcatctaacgagcttataagctaatccaacaaactataag 30318017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 34435967 - 34436048
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  34435967 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 34436048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 41991676 - 41991757
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  41991676 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 41991757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 43968344 - 43968425
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||| ||| ||||||||||| ||| ||||| ||||||||| |||||||| || | ||||||| ||||||    
T  43968344 ataagctcatgagaaaaacttgttaccaaacacgtcatgttttgatccaacaagcttataagctaattcaacaaattataag 43968425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 51063017 - 51062936
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||| ||||||| ||||||||||||| ||| |||||||||| || | |||||| |||||||    
T  51063017 ataagctcatgaaaaaagcttgttatcaaacacgtcacgttttcatctaacgaacttataagataattcaacaagctataag 51062936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 52184819 - 52184900
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | ||||||||||| || ||||| |||||||    
T  52184819 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagttaatctaacaagctataag 52184900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 40374508 - 40374582
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataagt 202  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| ||||||||||| ||||||||    
T  40374508 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctagtccaacaagctataagt 40374582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 32111560 - 32111633
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| ||||||||||| |||||||    
T  32111560 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctagtccaacaagctataag 32111633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 36237943 - 36237862
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||| ||  ||| |||| ||| ||| | ||||||||||| ||||||||||||||||    
T  36237943 ataagctcatgaaaaaagcttgttaccaaatacgccacatttttatctaacgagcttataagttaatccaacaaactataag 36237862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 12122179 - 12122247
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||||||||||| |||| |||| || |||||| |||||||| || | |||||| |||||||    
T  12122179 aaaagcttgttaccaaacacgtcacattttgatacaacaagcttataagctaattcaacaagctataag 12122247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 6e-27; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 2890966 - 2891047
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  2890966 ataagctcgtgagaaaagtttattatcaaacacatcacattttcatccaacaagcttataagttagtccaacaaactataag 2891047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 7157490 - 7157571
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| |||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  7157490 ataagctcgtgagaaaagcttgttaccaaacgcatcacgttttcatccaacaagcttataagttagtccaacaagctataag 7157571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 35766666 - 35766585
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||| || ||||| || |||||||    
T  35766666 ataagctcatgagaaaagcttgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataag 35766585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 17645413 - 17645332
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||| ||||||||||| ||||||||||||||||| |||||||||| || || ||||| |||||||    
T  17645413 ataagctcatgagaaaagcttgttaccaaacacgtcacgttttcatccaacgaacttataagctaatctaacaagctataag 17645332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 5102695 - 5102774
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactata 199  Q
    |||| ||| ||||||||| || ||| ||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||    
T  5102695 ataagctcatgagaaaagtttgttatcaaacacatcatgttttgatccaacaaacttataagctagtccaacaatctata 5102774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 13359473 - 13359552
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactata 199  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||||| |||||||| || |||||||| |||||    
T  13359473 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacaagcttataagctaatccaacaagctata 13359552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 6789606 - 6789687
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||| || |||||||| |||||||    
T  6789606 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataag 6789687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 12280888 - 12280807
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || ||||||||||||||||    
T  12280888 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaaactataag 12280807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 25881614 - 25881533
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||||||||| || ||||||||||| ||||||||||||||||| | |||||||| || || ||||| |||||||    
T  25881614 ataagctcatgagaaaagtttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagctataag 25881533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 35638871 - 35638790
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||||||| |||||||| ||| |||||||  ||| |||||||| ||| | ||||||||||| ||||||||||||||||    
T  35638871 ataagctcgtgaaaaaagcttgttatcaaacacgccacattttcatctaacgagcttataagttaatccaacaaactataag 35638790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 5050116 - 5050175
Alignment:
Q  142 ttaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||| ||||||||||||||||| | |||||||| || |||||||| |||||||    
T  5050116 ttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaagctataag 5050175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 36944259 - 36944313
Alignment:
Q  147 aaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||| |||| ||||||||||||||| |||||||||||||| ||||| |||||||    
T  36944259 aaacatatcatgttttcatccaacaagcttataagttagtctaacaagctataag 36944313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 15498752 - 15498671
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  15498752 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 15498671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 16218300 - 16218381
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  16218300 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataag 16218381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 17540368 - 17540287
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| ||||| || ||||||||||| ||||||||| ||||||| | |||||||| || |||||||| |||||||    
T  17540368 ataagctcatgaaaaaagtttgttaccaaacacgtcacgttttaatccaacgagcttataagctaatccaacaagctataag 17540287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 24171472 - 24171391
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| ||||| ||||||| ||| | |||||||| || |||||||| |||||||    
T  24171472 ataagctcatgaaaaaagcttgttaccaaacacgtcacgatttcatctaacgagcttataagctaatccaacaagctataag 24171391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 29525313 - 29525394
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  29525313 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 29525394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 36761169 - 36761088
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  36761169 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaacctataag 36761088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 37530737 - 37530818
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  37530737 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 37530818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 41734261 - 41734342
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  41734261 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataag 41734342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 42709418 - 42709337
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  42709418 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 42709337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 13019093 - 13019028
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaa 193  Q
    ||||||||||||| |||||||||||||| | |||| |||  |||||||||||||| |||||||||||    
T  13019093 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaaacttataagctagtccaacaa 13019028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 20768871 - 20768940
Alignment:
Q  131 agaaaagcttattaccaaacacatcacgttttcatccaa-caaacttataagttagtccaacaaactataa 200  Q
    |||||||||| |||||||||||||| | |||| ||| || ||| |||||||| ||||||||||||||||||    
T  20768871 agaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagatagtccaacaaactataa 20768940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 76521 - 76440
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| |||| || |||||||| |||||||||||  |||||||||||| ||| | |||||||| || ||||| || |||||||    
T  76521 ataagctcgggaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaaaaagctataag 76440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 3703559 - 3703498
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataag 181  Q
    |||| ||| |||||||| ||| ||| ||||||| |||||||||||||||| || ||||||||    
T  3703559 ataagctcatgagaaaaacttgttatcaaacacgtcacgttttcatccaataagcttataag 3703498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 7615002 - 7615075
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| |||||||| |||||||||||  || ||||||||| ||| | |||||||| || |||||||| |||||||    
T  7615002 gtgaaaaaagcttgttaccaaacacgccatgttttcatctaacgagcttataagctaatccaacaagctataag 7615075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 10815170 - 10815089
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||| |||||| |||  |||||||| ||| | |||||||| || ||||||||||||||||    
T  10815170 ataagctcatgaaaaaagcttgttactaaacacgtcatattttcatctaacgagcttataagctaatccaacaaactataag 10815089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 12953824 - 12953905
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||| |||||||  |||||||||||| ||| | |||||||| || ||||||||| ||||||    
T  12953824 ataagctcatgaaaaaagcttgttatcaaacacgccacgttttcatctaacgagcttataagctaatccaacaaattataag 12953905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 24463624 - 24463563
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataag 181  Q
    |||| ||| ||||||||  || |||||||| |||||| ||||| ||||||||||||||||||    
T  24463624 ataagctcatgagaaaaaattgttaccaaatacatcatgttttgatccaacaaacttataag 24463563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 27812993 - 27813074
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||  || | |||||| |||||||    
T  27812993 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataaactaattcaacaagctataag 27813074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 34589918 - 34589999
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  || ||||||||| ||| | |||||||| || |||||||| |||||||    
T  34589918 ataagctcatgaaaaaagcttgttaccaaacacgccatgttttcatctaacgagcttataagctaatccaacaagctataag 34589999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 3749366 - 3749418
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataa 180  Q
    ||||||||| ||||||| ||||||| |||  |||| |||||||||||||||||    
T  3749366 gtgagaaaaacttattatcaaacacgtcatattttgatccaacaaacttataa 3749418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 42997621 - 42997541
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  42997621 ataagctcgtgagaaaagcttgttaccaaacacatcacgttttcatccaacgagcttataagctagtccaacaaactataa 42997541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 3370556 - 3370476
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||| |||||||||    
T  3370556 ataagctcatgagaaaagcttgttaccaaacacatcacgttttcatccaacaaacttataaactaatccaaaaaactataa 3370476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 21920788 - 21920869
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||| |||| | |||||||| ||||||||||| |||||||    
T  21920788 ataagctcatgagaaaagcttgttaccaaacacatcacgttttcattcaactagcttataagctagtccaacaagctataag 21920869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 30523946 - 30524027
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| |||||||||||| ||| |||||| |||||||||||||||||||||||| ||||| ||||| |||||||| |||||||    
T  30523946 ataagctcgtgagaaaaacttgttaccatacacatcacgttttcatccaacaagcttatgagttaatccaacaagctataag 30524027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 46534515 - 46534434
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||||||||||||| || |||||| |||||||||||||||||||||||| |||||||| || |||||||| |||||||    
T  46534515 ataagctcgtgagaaaagtttgttaccatacacatcacgttttcatccaacaagcttataagctaatccaacaagctataag 46534434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 43158184 - 43158244
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataa 180  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||    
T  43158184 ataaactcgtgagaaaagcttcttaccaaacacatcacgttttcatccaacgagcttataa 43158244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 28235381 - 28235311
Alignment:
Q  131 agaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||||| ||||||||||| ||||||||||||||||| | |||||||| || ||||||||||||||||    
T  28235381 agaaaagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaaactataag 28235311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 981444 - 981363
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||||||| |||||||| ||| |||||||||||||||||||| |||| | |||||||| || ||||||||||||||||    
T  981444 ataagctcgtgaaaaaagcttgttatcaaacacatcacgttttcattcaactagcttataagctaatccaacaaactataag 981363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 6477024 - 6476952
Alignment:
Q  129 tgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||| ||||||||||||||||||||||||||||||| |||||||| || ||||| || |||||||    
T  6477024 tgagaaaaacttgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataag 6476952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 25696140 - 25696059
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||| ||||||||||| ||||||||||||||||| | |||||||| || || ||||| |||||||    
T  25696140 ataagctcatgagaaaagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagctataag 25696059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 46349876 - 46349957
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||||||||||| ||||||||||| || | ||||||||||||||| ||||||||||| ||||| || |||||||    
T  46349876 ataagctcatgagaaaagctcattaccaaacatattatgttttcatccaacaagcttataagttaatccaagaagctataag 46349957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 42980871 - 42980937
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagt 186  Q
    |||| ||| |||||||| ||||||||||||||| |||| |||| |||||||||||||||||| ||||    
T  42980871 ataagctcatgagaaaaacttattaccaaacacgtcacattttaatccaacaaacttataagctagt 42980937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 28958114 - 28958195
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | ||||||||||| |||||||| |||||||    
T  28958114 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagttaatccaacaagctataag 28958195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 4060446 - 4060378
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| |||||||||||  |||||||||||| ||| | |||||||| || ||||||||||||||||    
T  4060446 aaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaaactataag 4060378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 47479884 - 47479832
Alignment:
Q  129 tgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataag 181  Q
    |||||||||||| ||||||||||| ||||||||||||||||| | ||||||||    
T  47479884 tgagaaaagcttgttaccaaacacgtcacgttttcatccaacgagcttataag 47479832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 14792109 - 14792190
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| ||||| || ||||||||||||||||||||| ||||||| | |||||||| || || ||||| |||||||    
T  14792109 ataagctcatgaaaaaagtttgttaccaaacacatcacgttttaatccaacgagcttataagctaatctaacaagctataag 14792190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 27826816 - 27826735
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  27826816 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 27826735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 28494268 - 28494349
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  28494268 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 28494349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 29994208 - 29994289
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || || |||||||||||||    
T  29994208 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatctaacaaactataag 29994289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 40061262 - 40061189
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | ||||  |  ||||| |||||||| ||||||||||| |||||||    
T  40061262 gtgagaaaagctttttaccaaacacatctcattttattaaaacaagcttataagctagtccaacaagctataag 40061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 42265265 - 42265346
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| ||||| || ||||||||||| ||||||||||||| ||| | |||||||| || |||||||| |||||||    
T  42265265 ataagctcatgaaaaaagtttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataag 42265346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 42329015 - 42329096
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  42329015 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataag 42329096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 43468011 - 43468083
Alignment:
Q  129 tgagaaaagcttattaccaaacacatcacgttttcatccaa-caaacttataagttagtccaacaaactataag 201  Q
    |||||||||||| |||||||||||||| | |||| ||| || ||||||||||||  ||||||||||||||||||    
T  43468011 tgagaaaagctttttaccaaacacatctcatttt-atcaaaacaaacttataagccagtccaacaaactataag 43468083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 31031899 - 31031966
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||||||| |||||||||||  |||||||||||  ||| | ||||||||||| |||||||| ||||||    
T  31031899 aaaagcttgttaccaaacacgccacgttttcatttaacgagcttataagttaatccaacaagctataa 31031966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 37658115 - 37658188
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| ||||||||||| |||||||    
T  37658115 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctagtccaacaagctataag 37658188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 39870021 - 39870094
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| || ||||||||||||||||    
T  39870021 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctaatccaacaaactataag 39870094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 9806589 - 9806661
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataa 200  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| ||||||||||| ||||||    
T  9806589 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctagtccaacaagctataa 9806661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 35647523 - 35647442
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||| |||||||| ||| | ||||||||  | |||||||| |||||||    
T  35647523 ataagctcatgaaaaaagcttgttaccaaacacgtcacattttcatctaacgagcttataagcaaatccaacaagctataag 35647442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 46672613 - 46672540
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaa 193  Q
    |||| ||| ||| |||||||| ||||||||||| |||| |||||||| ||| | |||||||| || ||||||||    
T  46672613 ataagctcatgaaaaaagcttgttaccaaacacgtcacattttcatctaacgagcttataagctaatccaacaa 46672540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 42328169 - 42328229
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaa 193  Q
    |||||||||||||||||| | |||| |||||||| ||| | |||||||| || ||||||||    
T  42328169 aaaagcttattaccaaactcgtcacattttcatctaacgagcttataagctaatccaacaa 42328229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 46615671 - 46615751
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||||||| |||||||||||   ||||||||||| ||| | |||||||| || || ||||||||||||    
T  46615671 ataagctcatgaaaaaagcttgttaccaaacacgctacgttttcatctaacgagcttataagctaatctaacaaactataa 46615751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 53431737 - 53431656
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||||||||||||| || ||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  53431737 ataagctcgtgagaaaagtttgttaccaaacacatcatgttttcatccaacaaacttataagctagtccaacaagctataag 53431656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 30653283 - 30653356
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaa 193  Q
    |||| ||||||| |||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  30653283 ataagctcgtgaaaaaagcttgttaccaaacacatcatgttttcatccaacaagcttataagctagtccaacaa 30653356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 51941210 - 51941129
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||| ||| |||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  51941210 ataagctcatgagaaaaacttgttaccaaacatatcatgttttgatccaacaaacttataagttagtccaacaagctataag 51941129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 24152774 - 24152702
Alignment:
Q  129 tgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||||||||||||||||||||||||||||||||| | |||||||  ||||||||||| |||||||    
T  24152774 tgagaaaaacttattaccaaacacatcacgttttcatccaactagcttataaactagtccaacaagctataag 24152702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 25687093 - 25687013
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||| |||||| |||||||| || ||||| |||||||||    
T  25687093 ataagctcatgagaaaagcttgttaccaaacacatcacgttttcatacaacaagcttataagctaatccaaaaaactataa 25687013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 28778658 - 28778583
Alignment:
Q  125 ctcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||| || ||||| ||||||    
T  28778658 ctcgtgagaaaagcttgttaccaaacacgtcacgttttcatccaatgaacttataagttaatctaacaagctataa 28778583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 40674849 - 40674782
Alignment:
Q  126 tcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaa 193  Q
    |||||| |||||||||||||||||||||||| |||||||||||| || |||||||| |||||||||||    
T  40674849 tcgtgaaaaaagcttattaccaaacacatcatgttttcatccaataagcttataagctagtccaacaa 40674782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 37498310 - 37498228
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||| ||| ||||||||| || ||||||||||| ||||||||||||||||| | |||||||| || |||||||||||||||||    
T  37498310 ataagctcatgagaaaagtttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaaactataagt 37498228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 44525944 - 44526011
Alignment:
Q  134 aaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||||| ||||||||||||||||||||||||  ||| |||||||||| || ||||||||||||||||    
T  44525944 aaagcttgttaccaaacacatcacgttttcatttaacgaacttataagctaatccaacaaactataag 44526011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 2943644 - 2943725
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||| || ||||||||||||||||    
T  2943644 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaaactataag 2943725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 47633836 - 47633917
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||| || |||||||| |||||||    
T  47633836 ataaactcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataag 47633917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 49335183 - 49335264
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||||||||||||||| |||||||||| || ||| |||||||||| || |||||||| |||||||    
T  49335183 ataagctcatgaaaaaagcttattaccaaacacgtcacgttttcttctaacgaacttataagctaatccaacaagctataag 49335264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 44448554 - 44448472
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | ||||||||||| |||||||| ||||||||    
T  44448554 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagttaatccaacaagctataagt 44448472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 6238295 - 6238214
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||| || |||||||| |||||||    
T  6238295 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataag 6238214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 6287944 - 6287883
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataag 181  Q
    |||| ||| ||| ||||| || |||||||||||||||||||||||||||| |||||||||||    
T  6287944 ataagctcatgaaaaaagtttgttaccaaacacatcacgttttcatccaataaacttataag 6287883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 43374702 - 43374621
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  43374702 ataaactcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataag 43374621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 54683704 - 54683643
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataag 181  Q
    |||| ||| |||||||||||| ||||||||||| ||||||||||||||||| | ||||||||    
T  54683704 ataagctcatgagaaaagcttgttaccaaacacgtcacgttttcatccaacgagcttataag 54683643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 7141135 - 7141187
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaa 172  Q
    |||| |||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  7141135 ataagctcgcgagaaaagcttgttaacaaacacatcacgttttcatccaacaa 7141187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 19801855 - 19801936
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  19801855 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 19801936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 33984195 - 33984114
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||| || | |||||| |||||||    
T  33984195 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaattcaacaagctataag 33984114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 55001736 - 55001817
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||| | |||||||||||| |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  55001736 ataagctcatgaaaaaagcctgttaccaaacacaccacgttttcatctaacgagcttataagctaatccaacaagctataag 55001817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 55496061 - 55496110
Alignment:
Q  152 catcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||| ||||||||||||||| |||||||| ||||||||||| |||||||    
T  55496061 catcatgttttcatccaacaagcttataagctagtccaacaagctataag 55496110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 39840200 - 39840268
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  39840200 aaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataag 39840268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 40685885 - 40685825
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataa 180  Q
    |||| ||| |||| |||| || ||||||||||||||| ||||||||||||| |||||||||    
T  40685885 ataagctcatgagcaaagtttgttaccaaacacatcatgttttcatccaacgaacttataa 40685825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 53284101 - 53284033
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  53284101 aaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 53284033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 52908487 - 52908440
Alignment:
Q  146 caaacacatcacgttttcatccaacaaacttataagttagtccaacaa 193  Q
    |||||||||||| |||||||||||| || ||||||| |||||||||||    
T  52908487 caaacacatcacattttcatccaactaatttataagctagtccaacaa 52908440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 1771840 - 1771913
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatccaa-caaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | |||| ||| || ||| |||||||| ||||||||||| |||||||    
T  1771840 gtgagaaaagctttttaccaaacacatctcatttt-atcaaagcaagcttataagctagtccaacaagctataag 1771913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 28459708 - 28459639
Alignment:
Q  131 agaaaagcttattaccaaacacatcacgttttcatccaa-caaacttataagttagtccaacaaactataa 200  Q
    |||||||||| |||||||||||||| | |||| ||| || ||| |||||||| ||||||||||||||||||    
T  28459708 agaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagatagtccaacaaactataa 28459639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 30411252 - 30411325
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| ||||||||||| |||||||    
T  30411252 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctagtccaacaagctataag 30411325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 36181362 - 36181444
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||| ||| ||| ||||||||||||||||||||  |||||||||||| ||| |  ||||||| || |  ||||||||||||||    
T  36181362 ataagctcatgaaaaaagcttattaccaaacacgacacgttttcatctaacgagtttataagctaatttaacaaactataagt 36181444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 19801033 - 19800952
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||  ||| | |||||||| || |||||||| |||||||    
T  19801033 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatgtaacgagcttataagctaatccaacaagctataag 19800952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 32012641 - 32012573
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| |||| ||||||  ||| |||||||| |||||||||||||| || || ||||| |||||||    
T  32012641 aaaagcttgttacgaaacacgccacattttcatctaacaaacttataagctaatctaacaagctataag 32012573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 44277957 - 44278039
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||| ||||||||    
T  44277957 ataagctcatgagaaaagcttgttaccaaacacatcacgttttcatccaactagcttataagctagtccaacaagctataagt 44278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 2459638 - 2459719
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| || |||||||| || |||||||| |||||||    
T  2459638 ataagctcgtgagaaaagcttgttaccaaacacatcacgttttcatccaataagcttataagctaatccaacaagctataag 2459719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 38058856 - 38058775
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| |||||||||||||||| ||||||||||||||||||||||| |||||||  ||||||| ||||||||||| |||||||    
T  38058856 ataagctcgtgagaaaagcttgttaccaaacacatcacgttttcaaccaacaaggttataagctagtccaacaagctataag 38058775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 28343796 - 28343716
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||| ||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  28343796 ataagctcatgaaaaaaacttgttaccaaacacatcacgttttcatccaacgaacttataagttactccaacaaactataa 28343716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 41865394 - 41865313
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||| || ||||| || |||||||    
T  41865394 ataagctcatgagaaaagctcgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataag 41865313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 46742563 - 46742482
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||| ||||||||| ||||| ||||||||||||||| |||||||  || ||||| ||||||||||    
T  46742563 ataagctcatgagaaaagcttgttaccaaacgcatcatgttttcatccaacaagcttataatctaatccaagaaactataag 46742482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 11332949 - 11332869
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| |||||||||||| |||| ||||||||||  ||||||||| || | |||||||| ||||||||||||||||||    
T  11332949 ataagctcctgagaaaagcttgttactaaacacatcaatttttcatcccacgagcttataagctagtccaacaaactataa 11332869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 11490970 - 11490890
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| |||||||||||| |||| ||||||||||  ||||||||| || | |||||||| ||||||||||||||||||    
T  11490970 ataagctcctgagaaaagcttgttactaaacacatcaatttttcatcccacgagcttataagctagtccaacaaactataa 11490890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 36739660 - 36739580
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||||||  ||||||||||| ||||||||||||| ||| | ||||||||||| |||||||||||||||    
T  36739660 ataagctcatgaaaaaagctcgttaccaaacacgtcacgttttcatctaacgagcttataagttaatccaacaaactataa 36739580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 9423058 - 9423129
Alignment:
Q  131 agaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||||||||| |||||||||||||||| |||| ||||||||| |||||||| || | |||||| ||||||||    
T  9423058 agaaaagcttgttaccaaacacatcacattttgatccaacaagcttataagctaattcaacaagctataagt 9423129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 2937433 - 2937363
Alignment:
Q  131 agaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||||| || |||||||||||||||| |||| |||||||||||||||||| || | |||||| |||||||    
T  2937433 agaaaagtttgttaccaaacacatcacattttgatccaacaaacttataagctaattcaacaagctataag 2937363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 28955547 - 28955629
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||| ||| ||| |||||||| ||||||||||||||||||||||||| ||| | |||||||| || || ||||| ||||||||    
T  28955547 ataagctcatgaaaaaagcttgttaccaaacacatcacgttttcatctaacgagcttataagctaatctaacaagctataagt 28955629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 38624175 - 38624093
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||||||||||||    
T  38624175 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaaactataagt 38624093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 5698606 - 5698534
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| ||| |||||||||| | |||| ||| ||||| |||||||||||||||||||| |||||||    
T  5698606 gtgagaaaagctttttatcaaacacatctcatttt-atcaaacaagcttataagttagtccaacaagctataag 5698534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 31657103 - 31657172
Alignment:
Q  131 agaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||||||||| || ||||||||||||||||||||||| || | |||||||| || ||||||||| |||||    
T  31657103 agaaaagcttgttgccaaacacatcacgttttcatccgacgagcttataagctaatccaacaaattataa 31657172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 46315680 - 46315761
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||| || |||||||| |||||||    
T  46315680 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataag 46315761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 28314846 - 28314926
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||||||| ||||||||||||||||||||| ||| ||  | ||||||||||| ||||||||| |||||    
T  28314846 ataagctcatgaaaaaagcttgttaccaaacacatcacgtttttatctaatgagcttataagttaatccaacaaattataa 28314926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 47326598 - 47326657
Alignment:
Q  142 ttaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||||||| |||||||||||| ||| | |||||||| || ||||||||||||||||    
T  47326598 ttaccaaacacaccacgttttcatctaacgagcttataagctaatccaacaaactataag 47326657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 25365856 - 25365786
Alignment:
Q  131 agaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||||| || ||||||||||  ||||||||||||||||| | ||||||||||| || ||||| |||||||    
T  25365856 agaaaagtttgttaccaaacatgtcacgttttcatccaacgagcttataagttaatctaacaagctataag 25365786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 30358181 - 30358100
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  30358181 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 30358100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 33076711 - 33076631
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||| ||||||||||| |||| |||||||||||| | ||||| || || || |||||||||||||    
T  33076711 ataagctcatgagaaaagcttgttaccaaacacgtcacattttcatccaacgagcttat-agctaatctaacaaactataag 33076631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 39325718 - 39325637
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  39325718 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 39325637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 27747701 - 27747633
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  27747701 aaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataag 27747633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 45900276 - 45900196
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| ||||| || |||||||||||||||||||||| || ||| | |||||||| || |||||||| ||||||    
T  45900276 ataagctcatgaaaaaagtttgttaccaaacacatcacgttttcttctaacgagcttataagctaatccaacaagctataa 45900196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 50586184 - 50586252
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  50586184 aaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataag 50586252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 35179918 - 35179846
Alignment:
Q  129 tgagaaaagcttattaccaaacacatcacgttttcatccaa-caaacttataagttagtccaacaaactataag 201  Q
    |||||||||||| ||| |||||||||| | |||| ||| || |||||||||||| ||||||||||| |||||||    
T  35179918 tgagaaaagctttttatcaaacacatctcatttt-atcaaaacaaacttataagctagtccaacaagctataag 35179846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 38815541 - 38815622
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  ||| |||||||| ||| | |||||||| || |||||||| |||||||    
T  38815541 ataagctcatgaaaaaagcttgttaccaaacacgccacattttcatctaacgagcttataagctaatccaacaagctataag 38815622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 42628218 - 42628290
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatccaa-caaacttataagttagtccaacaaactataa 200  Q
    ||||||||||||| |||||||||||||| | |||| ||| || ||| |||||||| ||||||||||| ||||||    
T  42628218 gtgagaaaagctttttaccaaacacatctcatttt-atcaaagcaagcttataagctagtccaacaagctataa 42628290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 1487 - 1568
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  1487 ataagctcatgagaaaagtttgttaccaaacacatcacgttttcatccaacaagcttataagctagttcaacaaactataag 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 3e-22; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 2773575 - 2773656
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| |||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  2773575 ataagctcgtgagaaaagcttgttaccaagcacgtcacgttttcatccaacaagcttataagctagtccaacaagctataag 2773656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 41355718 - 41355648
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaa 190  Q
    |||| ||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| || |||||    
T  41355718 ataagctcatgagaaaagtttgttaccaaacacatcacgttttcatccaacaaacttataagctaatccaa 41355648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 34903370 - 34903443
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaa 193  Q
    |||| |||||||||||||||| ||| | ||||||||| ||||||||||||||| |||||||| |||||||||||    
T  34903370 ataagctcgtgagaaaagcttgttatccaacacatcatgttttcatccaacaagcttataagctagtccaacaa 34903443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 3512569 - 3512497
Alignment:
Q  129 tgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||| ||||||||||||||||||||||||||||||| |||||||| || ||||| || |||||||    
T  3512569 tgagaaaaacttgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataag 3512497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 7303425 - 7303365
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataa 180  Q
    |||| ||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  7303425 ataagctcatgagaaaagcttggtaccaaacacatcacattttcatccaacaaacttataa 7303365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 24804488 - 24804560
Alignment:
Q  129 tgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||||||| |||||||||||||||| |||||||||||||| |||||| | || ||||| || |||||||    
T  24804488 tgagaaaagcttgttaccaaacacatcacattttcatccaacaagcttataggctaatccaagaagctataag 24804560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 16786534 - 16786605
Alignment:
Q  131 agaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    ||||||| || |||||||||||||||||||||||| |||||| |||||||| || ||||| || ||||||||    
T  16786534 agaaaagtttgttaccaaacacatcacgttttcattcaacaagcttataagctaatccaagaagctataagt 16786605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 16785924 - 16785863
Alignment:
Q  118 tcataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttata 179  Q
    |||||| ||| |||||||||||| ||||||||||| ||||||||||||||||| | ||||||    
T  16785924 tcataagctcatgagaaaagcttgttaccaaacacgtcacgttttcatccaacgagcttata 16785863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 21266856 - 21266905
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaa 169  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||||||||    
T  21266856 ataagctcgtgagaaaagcttgttaccaaacacgtcacgttttcatccaa 21266905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 35057293 - 35057374
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||| ||||||||||| |||||||| |||||||| | |||||||| || || ||||| |||||||    
T  35057293 ataagctcatgagaaaagcttgttaccaaacacgtcacgtttgcatccaacgagcttataagctaatctaacaagctataag 35057374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 284925 - 284845
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| |||||||||| || |||||||| ||||||    
T  284925 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgaacttataagctaatccaacaagctataa 284845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 630952 - 631032
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| |||||||||| || |||||||| ||||||    
T  630952 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgaacttataagctaatccaacaagctataa 631032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 816764 - 816844
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| |||||||||| || |||||||| ||||||    
T  816764 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgaacttataagctaatccaacaagctataa 816844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 16785726 - 16785663
Alignment:
Q  118 tcataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataag 181  Q
    |||||| ||| ||| |||||||| ||||||||||| ||||||||||||||||| | ||||||||    
T  16785726 tcataagctcatgataaaagcttgttaccaaacacgtcacgttttcatccaacgagcttataag 16785663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 29051173 - 29051246
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||||| || | |||  ||||| ||||| ||||||||||||||||||||||    
T  29051173 gtgagaaaagctttttaccaaacacatcacattct-atcaaaacaagcttatgagttagtccaacaaactataag 29051246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 5574709 - 5574628
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||| ||| |||||||||||  |||||||||||| ||| | ||||||||||| | ||||||||||||||    
T  5574709 ataagctcatgaaaaaaacttgttaccaaacacgccacgttttcatctaacgagcttataagttaattcaacaaactataag 5574628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 22215218 - 22215137
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  22215218 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataag 22215137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 43800761 - 43800842
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  43800761 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 43800842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 35160275 - 35160343
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| |||||||||||  |||||||||||| ||| |||||||||| || ||||| || |||||||    
T  35160275 aaaagcttgttaccaaacacgccacgttttcatctaacgaacttataagctaatccaataagctataag 35160343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 17121909 - 17121842
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    ||||| || |||||||||||   ||||||||||| ||| ||||||||||||| |||||||| ||||||    
T  17121909 aaaagtttgttaccaaacacgctacgttttcatctaacgaacttataagttaatccaacaacctataa 17121842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 18146441 - 18146368
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| ||||||||||| |||||||    
T  18146441 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctagtccaacaagctataag 18146368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 39733818 - 39733760
Alignment:
Q  135 aagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaa 193  Q
    |||||| |||||||||||| |||||||||||| ||| | |||||||| || ||||||||    
T  39733818 aagcttgttaccaaacacaccacgttttcatctaacgagcttataagctaatccaacaa 39733760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 40532156 - 40532083
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatccaa-caaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| ||||| |||||||| | |||| ||| || ||| ||||||||||||||||| ||||||||||    
T  40532156 gtgagaaaagctttttaccgaacacatctcatttt-atcaaaacaagcttataagttagtccaataaactataag 40532083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 45069819 - 45069892
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| ||||||||||| |||||||    
T  45069819 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctagtccaacaagctataag 45069892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 14911872 - 14911791
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||| ||| |||||||||||  ||| |||||||| ||| | |||||||| || ||||||||||||||||    
T  14911872 ataagctcatgaaaaaaacttgttaccaaacacgccacattttcatctaacgagcttataagctaatccaacaaactataag 14911791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 20697498 - 20697579
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| | | ||||||||| ||| | |||||||| || |||||||| |||||||    
T  20697498 ataagctcatgaaaaaagcttgttaccaaacacgttatgttttcatctaacgagcttataagctaatccaacaagctataag 20697579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 53472 - 53543
Alignment:
Q  129 tgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||||||| |||||||||   |||| ||| ||||||||||||||||| | ||| || |||||||    
T  53472 tgagaaaagcttattactaaacacatctaatttt-atcaaacaaacttataagttaattcaaaaagctataag 53543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 35398012 - 35398064
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttag 185  Q
    |||||||| |||||||||||  |||||||||||| ||| | ||||||||||||    
T  35398012 aaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagttag 35398064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 38746962 - 38747030
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||||||| |||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  38746962 aaaagcttgttaccaaccacgccacgttttcatctaacgagcttataagctaatccaacaagctataag 38747030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 3e-22; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 6834038 - 6834119
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||||||||| || ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  6834038 ataagctcatgagaaaagtttgttaccaaacacatcacgttttcatccaacaagcttataagctagttcaacaaactataag 6834119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 25023447 - 25023528
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||||| |||||||| || |||||||| |||||||    
T  25023447 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacaagcttataagctaatccaacaagctataag 25023528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 20645752 - 20645684
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||||||||||| |||| |||||||| ||| | |||||||| || ||||||||||||||||    
T  20645752 aaaagcttgttaccaaacacgtcacattttcatctaacgagcttataagctaatccaacaaactataag 20645684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 20992257 - 20992337
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||||||||||    
T  20992257 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaaactataa 20992337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 18801807 - 18801726
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataag 201  Q
    ||||||| ||||||||||||| ||||||||||| || | |||| |||  ||||| |||||||||||||||||||| |||||||    
T  18801807 ataaactagtgagaaaagctttttaccaaacacgtctcatttt-atcaaaacaagcttataagttagtccaacaagctataag 18801726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 21459118 - 21459048
Alignment:
Q  131 agaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||||| ||| ||||||| ||||||||||||||||| | |||||||| || || ||||| |||||||    
T  21459118 agaaaagcttgttatcaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagctataag 21459048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 12130588 - 12130507
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| ||||| || |||||||||||  |||||||||||| |||||| ||||||| || |||||||| |||||||    
T  12130588 ataagctcatgaaaaaagtttgttaccaaacacgccacgttttcatctaacaaatttataagctaatccaacaagctataag 12130507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 24119231 - 24119312
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  24119231 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 24119312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 13756312 - 13756392
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| ||||||    
T  13756312 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataa 13756392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 21778078 - 21778150
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaaca 192  Q
    |||| ||||||| |||||||| |||||||||||| ||  |||||||| ||| | ||||||||||| |||||||    
T  21778078 ataagctcgtgaaaaaagcttgttaccaaacacaccagattttcatctaacgagcttataagttaatccaaca 21778150  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 18368734 - 18368807
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| ||||||||||| |||||||    
T  18368734 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctagtccaacaagctataag 18368807  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 22707385 - 22707317
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||||||| ||| ||||||||||||| ||| | |||||||  || |||||||| |||||||    
T  22707385 aaaagcttgttaccaatcacgtcacgttttcatctaacgagcttataaactaatccaacaagctataag 22707317  T

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Target: chr2 (Bit Score: 54; Significance: 3e-22; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 6432277 - 6432196
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||| |||||||    
T  6432277 ataagctcatgagaaaagcttgttaccaaacacatcacgttttcatccaactagcttataagctagtccaacaagctataag 6432196  T

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Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 45377016 - 45376936
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||| ||||||    
T  45377016 ataagctcatgagaaaagcttgttaccaaacacatcacgttttcatccaactagcttataagctagtccaacaagctataa 45376936  T

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Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 10361500 - 10361419
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||||||||  | |||||||| ||||||||||| |||||||    
T  10361500 ataagctcgtgaaaaaagcttattaccaaacacatcatgttttcatccaatgagcttataagctagtccaacaagctataag 10361419  T

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Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 42097904 - 42097985
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| |||||||||||| |||||||||||||||||||||||||||| || |||||||| || ||||| || |||||||    
T  42097904 ataagctcatgagaaaagcttgttaccaaacacatcacgttttcatccaataagcttataagctaatccaagaagctataag 42097985  T

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Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 35422150 - 35422070
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||| |||||||  ||||||| || ||||| |||||||||    
T  35422150 ataagctcatgagaaaagcttgttaccaaacacatcacgttttcaaccaacaagtttataagctaatccaaaaaactataa 35422070  T

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Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 43568470 - 43568388
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataagt 202  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||||||| | |||||||| || |||||||| ||||||||    
T  43568470 ataagctcatgataaaagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaagctataagt 43568388  T

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Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 1876025 - 1876106
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || ||||||||||||||||    
T  1876025 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaaactataag 1876106  T

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Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 36936078 - 36936146
Alignment:
Q  133 aaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| ||||||||||| ||||||||||||| ||| | |||||||| || |||||||| |||||||    
T  36936078 aaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataag 36936146  T

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Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 39532161 - 39532088
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatccaa-caaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | |||| ||| || |||||||||||| ||||||||||| |||||||    
T  39532161 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaaacttataagctagtccaacaagctataag 39532088  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 7454639 - 7454558
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  7454639 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 7454558  T

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Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 8875780 - 8875707
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaa 193  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||| || ||||||||    
T  8875780 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaa 8875707  T

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Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 12160906 - 12160987
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| |||||||||| || ||| | |||||||| || |||||||| |||||||    
T  12160906 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataag 12160987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 30523716 - 30523635
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||||  |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  30523716 ataagctcatgaaaaaagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataag 30523635  T

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Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 34245353 - 34245272
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| |||||||||| | |||||||||||| ||| | |||||||| || |||||||| |||||||    
T  34245353 ataagctcatgaaaaaagcttgttaccaaacaaaccacgttttcatctaacgagcttataagctaatccaacaagctataag 34245272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 39241153 - 39241234
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| ||||| || ||||||||||| ||||||||||||| ||| | |||||||| || |||||||| |||||||    
T  39241153 ataagctcatgaaaaaagtttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataag 39241234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 42519821 - 42519740
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||| || | |||||| |||||||    
T  42519821 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatgcaacaagctataag 42519740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 5774200 - 5774120
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||| ||| |||||||||||  |||||||||||| ||||| |||||||| || |||||||| ||||||    
T  5774200 ataagctcatgaaaaaaacttgttaccaaacacgccacgttttcatctaacaagcttataagctaatccaacaagctataa 5774120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 14958227 - 14958147
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataa 200  Q
    |||| ||| ||| |||||||| ||||||||||| ||||||||||||| ||| | |||||||  || |||||||| ||||||    
T  14958227 ataagctcatgaaaaaagcttgttaccaaacacgtcacgttttcatctaacgagcttataaactaatccaacaagctataa 14958147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 18109715 - 18109788
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| ||||||||||| |||||||    
T  18109715 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctagtccaacaagctataag 18109788  T

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Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 40788802 - 40788756
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatc 166  Q
    |||| |||||||||||| ||||||| |||| ||||||||||||||||    
T  40788802 ataatctcgtgagaaaaacttattatcaaatacatcacgttttcatc 40788756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 43496258 - 43496188
Alignment:
Q  131 agaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||| ||| |||| |||||| ||||||||||||||||| | |||||||| || | |||||| |||||||    
T  43496258 agaaaaacttgttactaaacacgtcacgttttcatccaacgagcttataagctaatgcaacaagctataag 43496188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 3147554 - 3147493
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataag 181  Q
    |||| ||| |||||||| ||| ||||||||||| |||| ||||||||||| || ||||||||    
T  3147554 ataagctcatgagaaaaacttgttaccaaacacgtcacattttcatccaagaagcttataag 3147493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 40862204 - 40862276
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatc-caacaaacttataagttagtccaacaaactataa 200  Q
    ||||||||||||| |||||||||||||| | |||| |||  ||||| |||||||| ||||||||||| ||||||    
T  40862204 gtgagaaaagctttttaccaaacacatctcatttt-atcaaaacaagcttataagctagtccaacaagctataa 40862276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 157607 - 157688
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||||||| |||||||||||| ||||||||||| |||| |||||||||||| | |||||||| || || |||||||||||||    
T  157607 ataaactcatgagaaaagctttttaccaaacacgtcacattttcatccaacgagcttataagctaatctaacaaactataag 157688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 4248 - 4175
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | ||||  |  ||||| |||||||| ||||||||||| |||||||    
T  4248 gtgagaaaagctttttaccaaacacatctcattttattaaaacaagcttataagctagtccaacaagctataag 4175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 11988 - 11915
Alignment:
Q  128 gtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    ||||||||||||| |||||||||||||| | ||||  |  ||||| |||||||| ||||||||||| |||||||    
T  11988 gtgagaaaagctttttaccaaacacatctcattttattaaaacaagcttataagctagtccaacaagctataag 11915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 7098 - 7017
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| ||||| || |||||||||||  |||||||||||| ||| || ||||||| || | ||||||||||||||    
T  7098 ataagctcatgaaaaaagtttgttaccaaacacgccacgttttcatctaacgaatttataagctaattcaacaaactataag 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 14183 - 14264
Alignment:
Q  120 ataaactcgtgagaaaagcttattaccaaacacatcacgttttcatccaacaaacttataagttagtccaacaaactataag 201  Q
    |||| ||| ||| ||||| || ||||||||||| ||||||||||||| ||| | |||||||  || ||||| ||||||||||    
T  14183 ataagctcatgaaaaaagtttgttaccaaacacgtcacgttttcatctaacgagcttataatctaatccaataaactataag 14264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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