View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9320_low_7 (Length: 350)

Name: NF9320_low_7
Description: NF9320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9320_low_7
NF9320_low_7
[»] chr4 (1 HSPs)
chr4 (270-335)||(44495207-44495272)


Alignment Details
Target: chr4 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 270 - 335
Target Start/End: Original strand, 44495207 - 44495272
Alignment:
270 atataagtgttttagataaaatcatgaaggagaaaataaaaaattggttaagttgtatgaggaaag 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
44495207 atataagtgttttagataaaatcatgaaggagaaaataaaaaattggttaagttgtatgaggaaag 44495272  T

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