View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9321_low_37 (Length: 289)
Name: NF9321_low_37
Description: NF9321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9321_low_37 |
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Alignment Details
Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 1713577 - 1713308
Alignment:
| Q |
1 |
ataactactgatgtgaaacagggggaaaagttttataaaagaatgtctagtaccaaccataaataagttccgtgagttaagaattcacttaattgagtat |
100 |
Q |
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| T |
1713577 |
ataactactgatgtgaaacagggggaaaagttttataaaagaatgtctagtaccaaccataaataagttccgtgagttaagaattcacttaattgagtat |
1713478 |
T |
|
| Q |
101 |
tgtttaacaaacacaagaaaaggctataatcaatcaaaagacagtgccaaacaataaaattcagaacttcccctcctaatccttattgtaaaggcagtca |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1713477 |
tgtttaacaaacacaagaaaaggctacaatcaatcaaaagacagtgccaaacaataaaattcagaacttcccctcctaatccttattgtaaaggcagtca |
1713378 |
T |
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| Q |
201 |
aaatattgatcctactcgaaagagatctcacaatcttcaatgacaatgggtgaacctgacgcctattcca |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
1713377 |
aaatattgatcctactcgaaagagatctcacaatcttcaatgacaacgggtgaacctgacgcctattcca |
1713308 |
T |
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