View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9321_low_49 (Length: 250)
Name: NF9321_low_49
Description: NF9321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9321_low_49 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 4997022 - 4997253
Alignment:
| Q |
1 |
atccttgtaactggagaggcataacctgcgattcgtggaataaatccgttgtatcaatcgacctcacagaaaccggtatttatggtgattttccatctaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4997022 |
atccttgtaactggagaggcataacctgcgattcgcggaataaatccgttgtatcaatcgacctcacagaaaccggtatttatggtgattttccatctaa |
4997121 |
T |
|
| Q |
101 |
tttctgtcatattccaacactccaaaatctttcacttgctaccaattttcttggtaatgctatttcctcacattccatgctaccctgctcccaccttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4997122 |
tttctgtcatattccaacactccaaaatctttcacttgctacgaattttcttggtaatgctatttcctcacattccatgctaccctgctcccaccttcat |
4997221 |
T |
|
| Q |
201 |
ttcttgaacatctccgacaacttattcgttgg |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
4997222 |
ttcttgaacatctccgacaacttattcgttgg |
4997253 |
T |
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