View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9322_low_10 (Length: 232)
Name: NF9322_low_10
Description: NF9322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9322_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26303988 - 26304211
Alignment:
| Q |
1 |
tgatgacgcgttacacttttagggactaaaatggtagtttgcccaataatcatttactattctctacccacattcactaaccttgcaatgcaaatgtcac |
100 |
Q |
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| T |
26303988 |
tgatgacgcgttgcacttttagggactaaaatggtagtttgcccaataatcatttactattctctacccacattcactaaccttgcaatgcaaatgtca- |
26304086 |
T |
|
| Q |
101 |
ttacgactaatgatagcaacagtatcatggtagcagcagggaaaataaacttgggtacggaggcaacctccatacgacggaaaatcgagaaattatcgca |
200 |
Q |
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|||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
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| T |
26304087 |
ttacgatttatgatagtaacagtatcatggtagcagcagggaaaataaacttgggtacggaggcaacctccatacgatggcaaatcgagaaattatcgca |
26304186 |
T |
|
| Q |
201 |
catgagcacaattaaggaacaccaa |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
26304187 |
catgagcacaattaaggaacaccaa |
26304211 |
T |
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