View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9323_low_12 (Length: 265)
Name: NF9323_low_12
Description: NF9323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9323_low_12 |
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Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 199754 - 199496
Alignment:
| Q |
1 |
caggtccaccaccaccacctatgccccactctcactaccctccacctcctcatgatccttttgctcccccaccacctgttttccaccatccaccccctcc |
100 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
199754 |
caggtccaccaccaccacctatgccccactctcaccaccctccacctcctcatgatccttttgctcccccaccacctgttttccaccatccaccccctcc |
199655 |
T |
|
| Q |
101 |
tccaaatccttacgctccaccaccagttgtccaccaccatcatacatcacttcatgctcatcctgctccaccgccaccacagcctggtcatcccggtcct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
199654 |
tccaaatccttacgctccaccaccagttgtccaccaccatcatacaccacttcatgctcatcctgctccaccgccaccacagcctggtcatcccggtcct |
199555 |
T |
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| Q |
201 |
ccaccgccacgtcctccgtattattaagtaattttcttcctatttactatatattaatt |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
199554 |
ccaccgccacgtcctccgtattattaagtaattttcttcctatttactatatattaatt |
199496 |
T |
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