View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9324_low_4 (Length: 287)
Name: NF9324_low_4
Description: NF9324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9324_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 5 - 271
Target Start/End: Original strand, 48987258 - 48987524
Alignment:
| Q |
5 |
agtttggaggtttgggggtccaaatcccattgttgaaacagtagccaattatcctcccaaatccgaatttctcgtccatcaccaacgccataaaactgcg |
104 |
Q |
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| T |
48987258 |
agtttggaggtttgggggtccaaatcccattgttgaaacagtagccaattatcctcccaaatccgaatttctcgtccatcaccaactccataaaactgcg |
48987357 |
T |
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| Q |
105 |
tatctataatctccaatctagattttaggatgcttccccaagtatatataacttgtattatatccatgatttgcttgcagaaagtgacccctaggaaaat |
204 |
Q |
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| T |
48987358 |
tatctataatctccaatctagattttaggatgcttccccaagtatatataacttgtattatatccatgatttgcttgcagaaagtggcccctaggaaaat |
48987457 |
T |
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| Q |
205 |
accttcctcttaagcaattagaaagtagactgtcctaattctataagatacacgccacccttgtttt |
271 |
Q |
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| T |
48987458 |
accttcctcttaagcaattagaaagtagactgtcctaattctataagatacacgccacccttgtttt |
48987524 |
T |
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