View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9325_high_5 (Length: 292)
Name: NF9325_high_5
Description: NF9325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9325_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 7181937 - 7182219
Alignment:
| Q |
1 |
tagtgatacgtgtttcgttattttgattggttgttcatgttgccctactactgttgttacaatttcaagaatttgcactttattttattttaaaaatttg |
100 |
Q |
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| T |
7181937 |
tagtgatatgtgtttcgttattttgattggttgttcatgttgccctactactgttgttacaatttcaagaatttgcactttattttattttaaaaatttg |
7182036 |
T |
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| Q |
101 |
caactgtaaattctttatgctcactttgacacccaaannnnnnngttaaaacttcgccacagtttctagaaaataattctaatgatataattatgagggg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7182037 |
caactgtaaattctttatgctcactttgacacccaaatttttttgttaaaacttcgccacagtttctagaaaataattctaatgatataattatgagggg |
7182136 |
T |
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| Q |
201 |
acaacaatattttagttttcctgaaatactcaaaatctcaaggggggacttgatttacatttgacaaatttctgcagaataatct |
285 |
Q |
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|||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||||| |||||||||| |
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| T |
7182137 |
acaacaatattttagttttcttgaaatactcaaaatctcaa-gtgggacttga-ttacatttgacacatttctggagaataatct |
7182219 |
T |
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