View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9325_high_6 (Length: 287)

Name: NF9325_high_6
Description: NF9325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9325_high_6
NF9325_high_6
[»] chr7 (28 HSPs)
chr7 (1-264)||(10481431-10481694)
chr7 (146-257)||(17842665-17842775)
chr7 (149-264)||(37109847-37109961)
chr7 (149-275)||(7334769-7334894)
chr7 (146-275)||(18797301-18797427)
chr7 (150-275)||(38258521-38258645)
chr7 (149-279)||(27283719-27283848)
chr7 (147-275)||(32821114-32821241)
chr7 (181-273)||(38053493-38053584)
chr7 (149-275)||(37346997-37347122)
chr7 (150-275)||(24211717-24211841)
chr7 (147-275)||(30055499-30055627)
chr7 (151-230)||(44413484-44413564)
chr7 (149-275)||(5657542-5657667)
chr7 (148-264)||(43686015-43686129)
chr7 (149-275)||(4582894-4583019)
chr7 (151-275)||(11071182-11071306)
chr7 (151-262)||(23111167-23111277)
chr7 (165-264)||(31520795-31520893)
chr7 (148-230)||(31579174-31579256)
chr7 (151-264)||(27421451-27421563)
chr7 (147-271)||(9355891-9356014)
chr7 (147-279)||(12390687-12390818)
chr7 (146-215)||(26524447-26524516)
chr7 (149-275)||(8861260-8861385)
chr7 (149-275)||(34362210-34362334)
chr7 (151-204)||(8299192-8299245)
chr7 (234-275)||(29173599-29173640)
[»] chr1 (36 HSPs)
chr1 (151-275)||(15752027-15752150)
chr1 (148-271)||(18422646-18422768)
chr1 (147-275)||(37618949-37619078)
chr1 (146-275)||(8222124-8222249)
chr1 (148-275)||(10182063-10182189)
chr1 (172-275)||(28564836-28564938)
chr1 (145-275)||(10922719-10922848)
chr1 (147-285)||(32267028-32267165)
chr1 (147-275)||(1547281-1547408)
chr1 (173-264)||(37451306-37451396)
chr1 (149-279)||(23999343-23999472)
chr1 (178-264)||(51128884-51128969)
chr1 (149-275)||(30327007-30327132)
chr1 (149-275)||(42721035-42721160)
chr1 (148-273)||(2959743-2959867)
chr1 (147-264)||(15382927-15383043)
chr1 (148-275)||(19899824-19899950)
chr1 (148-275)||(30254419-30254544)
chr1 (151-275)||(238568-238690)
chr1 (151-275)||(28769651-28769773)
chr1 (181-279)||(27563956-27564053)
chr1 (148-249)||(30254853-30254952)
chr1 (149-230)||(3309144-3309225)
chr1 (191-275)||(32216093-32216176)
chr1 (181-275)||(27763366-27763458)
chr1 (172-262)||(9903122-9903211)
chr1 (147-213)||(22170748-22170814)
chr1 (181-263)||(46931439-46931520)
chr1 (149-230)||(7079173-7079254)
chr1 (147-264)||(48620631-48620747)
chr1 (147-263)||(16415639-16415755)
chr1 (149-213)||(38823210-38823274)
chr1 (147-229)||(34012477-34012559)
chr1 (147-264)||(3534926-3535042)
chr1 (147-264)||(11742416-11742532)
chr1 (165-264)||(27267265-27267361)
[»] chr8 (31 HSPs)
chr8 (12-145)||(4953395-4953526)
chr8 (149-275)||(10555268-10555393)
chr8 (165-275)||(23854497-23854606)
chr8 (149-275)||(12876108-12876233)
chr8 (146-275)||(36695032-36695160)
chr8 (147-252)||(43643684-43643788)
chr8 (147-275)||(1204924-1205051)
chr8 (155-275)||(37970585-37970704)
chr8 (149-275)||(6098584-6098709)
chr8 (148-275)||(1150171-1150297)
chr8 (147-264)||(9864145-9864261)
chr8 (147-275)||(16222860-16222987)
chr8 (148-263)||(30654661-30654775)
chr8 (149-279)||(13307622-13307751)
chr8 (150-264)||(31933963-31934076)
chr8 (147-264)||(40862416-40862533)
chr8 (148-257)||(16446959-16447067)
chr8 (148-264)||(34952108-34952223)
chr8 (176-263)||(8803888-8803974)
chr8 (148-275)||(27082904-27083030)
chr8 (151-216)||(7891072-7891137)
chr8 (147-230)||(38643975-38644058)
chr8 (149-275)||(5300012-5300137)
chr8 (147-229)||(34894964-34895046)
chr8 (151-264)||(465843-465955)
chr8 (149-214)||(15009241-15009306)
chr8 (150-215)||(35459823-35459888)
chr8 (145-205)||(24823407-24823467)
chr8 (149-275)||(41362517-41362639)
chr8 (149-274)||(4133077-4133199)
chr8 (210-275)||(1149698-1149762)
[»] chr6 (11 HSPs)
chr6 (147-279)||(5627389-5627520)
chr6 (145-275)||(1945829-1945959)
chr6 (147-262)||(4318895-4319009)
chr6 (148-275)||(7055274-7055400)
chr6 (149-264)||(33893072-33893186)
chr6 (148-264)||(8513232-8513347)
chr6 (148-275)||(3879998-3880124)
chr6 (152-275)||(6091242-6091363)
chr6 (149-279)||(7235090-7235218)
chr6 (165-275)||(21017171-21017280)
chr6 (149-198)||(24662189-24662238)
[»] chr4 (35 HSPs)
chr4 (147-263)||(34361589-34361704)
chr4 (147-268)||(50697240-50697360)
chr4 (147-230)||(4396324-4396407)
chr4 (148-252)||(25184112-25184215)
chr4 (147-275)||(25701143-25701270)
chr4 (145-275)||(55477977-55478110)
chr4 (147-264)||(3042609-3042725)
chr4 (147-263)||(32912678-32912793)
chr4 (151-275)||(36493774-36493897)
chr4 (148-275)||(37663827-37663951)
chr4 (149-275)||(19089539-19089664)
chr4 (145-275)||(27396612-27396741)
chr4 (147-245)||(35021151-35021248)
chr4 (147-252)||(4205114-4205218)
chr4 (149-271)||(19440738-19440860)
chr4 (173-230)||(53124311-53124368)
chr4 (149-275)||(7703517-7703642)
chr4 (146-275)||(9139244-9139370)
chr4 (148-257)||(879652-879760)
chr4 (147-275)||(29584286-29584411)
chr4 (151-275)||(47253751-47253873)
chr4 (147-230)||(7152236-7152319)
chr4 (151-262)||(17167715-17167825)
chr4 (151-262)||(17173292-17173402)
chr4 (149-264)||(39397918-39398032)
chr4 (175-275)||(6864061-6864160)
chr4 (148-271)||(37287732-37287855)
chr4 (147-198)||(47073656-47073707)
chr4 (149-215)||(46884179-46884245)
chr4 (166-275)||(23761089-23761197)
chr4 (147-264)||(30002721-30002837)
chr4 (149-214)||(53337559-53337624)
chr4 (145-213)||(17272007-17272075)
chr4 (151-271)||(34948187-34948306)
chr4 (147-279)||(38011852-38011983)
[»] chr3 (28 HSPs)
chr3 (148-275)||(3655262-3655388)
chr3 (149-275)||(51213041-51213166)
chr3 (147-275)||(48354930-48355057)
chr3 (148-271)||(40552323-40552445)
chr3 (151-248)||(46297849-46297945)
chr3 (148-275)||(26941320-26941446)
chr3 (149-275)||(20373356-20373481)
chr3 (149-275)||(37203058-37203183)
chr3 (147-264)||(34132924-34133040)
chr3 (147-275)||(35844315-35844442)
chr3 (147-275)||(4761709-4761838)
chr3 (182-275)||(47481546-47481638)
chr3 (195-275)||(42506135-42506214)
chr3 (149-275)||(4015451-4015576)
chr3 (165-275)||(11357424-11357534)
chr3 (149-275)||(37157699-37157823)
chr3 (175-252)||(29099372-29099448)
chr3 (175-263)||(54505825-54505912)
chr3 (192-230)||(41585411-41585449)
chr3 (147-217)||(55343401-55343471)
chr3 (148-275)||(7327542-7327669)
chr3 (145-201)||(21193593-21193649)
chr3 (146-230)||(54828805-54828888)
chr3 (152-230)||(22446168-22446247)
chr3 (197-263)||(21009874-21009939)
chr3 (149-275)||(27480439-27480564)
chr3 (145-271)||(39282640-39282764)
chr3 (149-197)||(49359628-49359676)
[»] chr5 (34 HSPs)
chr5 (147-275)||(5112363-5112490)
chr5 (143-275)||(36860417-36860548)
chr5 (148-275)||(39572818-39572944)
chr5 (148-264)||(1429206-1429321)
chr5 (147-275)||(35826533-35826660)
chr5 (147-275)||(24886100-24886229)
chr5 (150-257)||(31705679-31705785)
chr5 (147-245)||(12910348-12910445)
chr5 (149-230)||(26317778-26317859)
chr5 (147-271)||(22974136-22974259)
chr5 (149-264)||(36866762-36866876)
chr5 (165-275)||(27318537-27318646)
chr5 (147-271)||(22255179-22255303)
chr5 (148-257)||(17158098-17158209)
chr5 (173-275)||(5829921-5830026)
chr5 (147-264)||(8741947-8742064)
chr5 (147-275)||(14919578-14919706)
chr5 (147-275)||(38528287-38528413)
chr5 (146-245)||(13956425-13956523)
chr5 (149-252)||(15724490-15724592)
chr5 (146-275)||(27330303-27330429)
chr5 (191-264)||(699192-699264)
chr5 (149-264)||(40133385-40133499)
chr5 (151-264)||(7208924-7209037)
chr5 (149-275)||(7693230-7693355)
chr5 (147-273)||(19119857-19119982)
chr5 (149-275)||(23116272-23116397)
chr5 (146-275)||(30969374-30969502)
chr5 (148-275)||(9200232-9200358)
chr5 (149-215)||(16004485-16004552)
chr5 (191-230)||(22255617-22255656)
chr5 (192-230)||(5748478-5748516)
chr5 (149-230)||(14409420-14409501)
chr5 (175-275)||(22980819-22980918)
[»] chr2 (24 HSPs)
chr2 (149-275)||(33551064-33551189)
chr2 (149-263)||(35958909-35959022)
chr2 (149-275)||(37905709-37905833)
chr2 (147-275)||(19289401-19289523)
chr2 (145-275)||(4166918-4167047)
chr2 (146-275)||(29242216-29242344)
chr2 (151-275)||(33660446-33660569)
chr2 (182-275)||(43648323-43648415)
chr2 (148-275)||(11366459-11366585)
chr2 (149-272)||(26357577-26357699)
chr2 (151-275)||(3176941-3177064)
chr2 (148-257)||(17054192-17054300)
chr2 (147-275)||(2325448-2325575)
chr2 (147-275)||(39167441-39167568)
chr2 (148-279)||(4264151-4264281)
chr2 (148-275)||(17071815-17071941)
chr2 (181-264)||(27350027-27350109)
chr2 (175-275)||(33902094-33902191)
chr2 (146-275)||(36641983-36642111)
chr2 (147-230)||(18494390-18494473)
chr2 (146-197)||(34441921-34441972)
chr2 (146-213)||(41960880-41960947)
chr2 (149-262)||(44913662-44913774)
chr2 (151-275)||(41463928-41464051)
[»] scaffold0291 (1 HSPs)
scaffold0291 (175-275)||(7913-8012)
[»] scaffold0002 (1 HSPs)
scaffold0002 (148-275)||(133-259)
[»] scaffold0022 (1 HSPs)
scaffold0022 (175-263)||(146088-146175)
[»] scaffold0061 (1 HSPs)
scaffold0061 (178-275)||(43986-44082)
[»] scaffold0017 (1 HSPs)
scaffold0017 (178-275)||(154705-154801)
[»] scaffold0009 (1 HSPs)
scaffold0009 (147-214)||(100819-100886)


Alignment Details
Target: chr7 (Bit Score: 181; Significance: 8e-98; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 10481431 - 10481694
Alignment:
Q  1 ttaattcttaccccttttaaactggtcttcatgcggtcatctatcataaggaattattggttctaagagttttctatttttaaaattgtatatgaaattg 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  10481431 ttaattcttaccccttttaaactggtcttcatgccgtcatctatcataaggaattattggttctaagagttttttattttcaaaattgtttatgaaattg 10481530  T
Q  101 ggtaaggaccccaagataccacaactcttctataggattgacacataaggaaaattctatcgtaaagtcaggaaaatgac-ttttttagttaagttaaca 199  Q
    ||||  ||||||| ||||  ||||||||||| |||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||| | |||||||||    
T  10481531 ggtagagaccccaggata-aacaactcttctgtaggattgacacataaggaaaattctatggtaaagttaggagaatgactttttttaatgaagttaaca 10481629  T
Q  200 ctataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  10481630 ctataacataaaaaatataatgagtaacacccccactgtttgtacaatgacatcaaaaattcagt 10481694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 17842775 - 17842665
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    ||||||||||||||| || ||||||  |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  17842775 taaggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccaccgtttgtaca 17842677  T
Q  246 atgacattaaaa 257  Q
    ||||||| ||||    
T  17842676 atgacatcaaaa 17842665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 149 - 264
Target Start/End: Original strand, 37109847 - 37109961
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || ||||||  |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | || ||||||||||||    
T  37109847 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccaccgtttgtacaatg 37109945  T
Q  249 acattaaaaattcagt 264  Q
    |||| |||| ||||||    
T  37109946 acatcaaaagttcagt 37109961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 7334769 - 7334894
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||  || |||||  || ||||||||||||  | |||||||||||||||||||||| || |||||||||||||| | |||||||||||||||    
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacacc-ccactgtttgtacaatg 7334867  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||||||||||||||    
T  7334868 acatcaaaagttcagttctcatagtat 7334894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 275
Target Start/End: Original strand, 18797301 - 18797427
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    ||||||||||||||| || |||||| || |||||||||||| || ||||||||||  ||||||||||||| |||||||||||||| | ||||||||||||    
T  18797301 taaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacac--taacataaaaaatgtaatgagtaacacc-ccactgtttgtaca 18797397  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
    ||||||| |||| |||| | ||||||||||    
T  18797398 atgacatcaaaagttcaatcctcatagtat 18797427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 275
Target Start/End: Original strand, 38258521 - 38258645
Alignment:
Q  150 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 249  Q
    ||||||||||  || ||||||  ||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  38258521 gaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccac-accgtttgtacaatga 38258619  T
Q  250 cattaaaaattcagttctcatagtat 275  Q
    ||| |||| |||| | ||||||||||    
T  38258620 catcaaaagttcaatcctcatagtat 38258645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 279
Target Start/End: Original strand, 27283719 - 27283848
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||| |  ||||||| |||||| || |||||||||||||||||| |||||| |||||||||||||| | || ||||||||||||    
T  27283719 ggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccaccgtttgtacaatg 27283817  T
Q  249 acattaaaaattcagttctcatagtattatc 279  Q
    | || |||| |||||| ||||||||||||||    
T  27283818 aaatcaaaagttcagtcctcatagtattatc 27283848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 32821241 - 32821114
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||| |||||||| |||||| || ||||||||| |||||||| |||||| || ||||||||| ||| |||||||||||||    
T  32821241 aaggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaaca-caccactgtttgtacaa 32821143  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    || ||| |||| |||||| ||| ||||||    
T  32821142 tggcatcaaaagttcagtcctcgtagtat 32821114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 38053493 - 38053584
Alignment:
Q  181 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagt 273  Q
    |||||| || ||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||| |||||||||||||||    
T  38053493 ttttttggtgaagttaatactataacataaaaaatgtaatgagtaaaacc-ctactgtttgtacaatgacatcaaaagttcagttctcatagt 38053584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 37346997 - 37347122
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||| ||| || |||||| |||||||| |||||| || ||||||| |||||| ||| ||||||||||||||||||||| | | |||||||||| ||    
T  37346997 ggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacacc-ccattgtttgtacagtg 37347095  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||| ||||||||||    
T  37347096 acatcaaaagttcagtcctcatagtat 37347122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 275
Target Start/End: Original strand, 24211717 - 24211841
Alignment:
Q  150 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 249  Q
    ||||||||||| || ||||||  | |||||||||||| || |||||||||||||||||| |||||| |||||||||||||| ||||||||| || ||||     
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ctactgtttatagaatgg 24211815  T
Q  250 cattaaaaattcagttctcatagtat 275  Q
    ||| |||| |||||  ||||||||||    
T  24211816 catcaaaagttcagccctcatagtat 24211841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 30055499 - 30055627
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    |||||||||||||| || ||||||  | |||||||||||| | | ||||||||||||||| || |||| | |||||||||||||| | ||||||||||||    
T  30055499 aaggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaacactataatatcaaaattgtaatgagtaacacccc-actgtttgtaca 30055597  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
    ||||||| |||| |||||| ||||||||||    
T  30055598 atgacatcaaaagttcagtcctcatagtat 30055627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 44413564 - 44413484
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgactttttt-agttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    |||||||||| ||||||||| ||||||||||||||| | | |||||||||||||||||| ||||||||| |||||||||||    
T  44413564 aaaattctatggtaaagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaatatagtgagtaacacc 44413484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 5657667 - 5657542
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| || |||||||||| |||| |||||||||||||||||| |||| | |  ||||||||||| | |||||||||||| ||    
T  5657667 ggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacagtg 5657569  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
     ||| |||| ||||||  |||||||||    
T  5657568 gcatcaaaagttcagtcttcatagtat 5657542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 43686015 - 43686129
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| ||||||||||||||  || ||||||||||||||| || |||||| |  ||||||||||  | ||||||||||||||    
T  43686015 aggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaacac--ccactgtttgtacaat 43686112  T
Q  248 gacattaaaaattcagt 264  Q
    | ||| |||| ||||||    
T  43686113 ggcatcaaaagttcagt 43686129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 4582894 - 4583019
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| ||||||||||||| | || ||||||| ||||||  || |||||| |  ||||||||||| | ||| |||||||||||    
T  4582894 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacacc-ccactatttgtacaatg 4582992  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||| | ||||||||    
T  4582993 acatcaaaagttcagtccccatagtat 4583019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 275
Target Start/End: Original strand, 11071182 - 11071306
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatg-acttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 249  Q
    |||||||||| || |||||| ||||||| | |||||| || ||||||  |||||| ||| |||||||||  |||||||||  | |||||||||||| |||    
T  11071182 aaaattctatggtgaagtcatgaaaatgtatttttttggtaaagttagtactatatcatcaaaaatatagcgagtaacactcc-actgtttgtacagtga 11071280  T
Q  250 cattaaaaattcagttctcatagtat 275  Q
    ||| |||| |||||||||||||||||    
T  11071281 catcaaaagttcagttctcatagtat 11071306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 23111167 - 23111277
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||| | || |||||| |||||||| |||| | || |||||||||||||||||| ||||||||  ||||||||| ||| ||| ||||||||||| |    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaaca-caccactatttgtacaatggc 23111265  T
Q  251 attaaaaattca 262  Q
    || |||| ||||    
T  23111266 atcaaaagttca 23111277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 264
Target Start/End: Complemental strand, 31520893 - 31520795
Alignment:
Q  165 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    |||||| ||||||||||||||| || ||||||| |||||| ||| ||||||||| ||||||||| | | | |||||||||| |||||| |||| ||||||    
T  31520893 aagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaaca-ctccattgtttgtacagtgacatcaaaagttcagt 31520795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 31579256 - 31579174
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    ||||||||||||| || ||||||  | ||| | |||||| || |||||||||||||||||| |||||| ||||||||||||||    
T  31579256 aggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc 31579174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 27421563 - 27421451
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || |||||  || ||||| |||||| || |||||||||||||||||| |||| | |  ||||||||| | | |||||||||||||||||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaagtgttgtgagtaaca-ctccactgtttgtacaatgac 27421465  T
Q  251 attaaaaattcagt 264  Q
    || |||| ||||||    
T  27421464 atcaaaagttcagt 27421451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 271
Target Start/End: Complemental strand, 9356014 - 9355891
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||| ||| || |||||| || ||||||  |||| || || ||||||||||| |||||||||| || |||| || ||| | ||||||||||||     
T  9356014 aaggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatgtagtgagcaatacc-ccactgtttgtacag 9355916  T
Q  247 tgacattaaaaattcagttctcata 271  Q
    |||||| |||| || ||||||||||    
T  9355915 tgacatcaaaagtttagttctcata 9355891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 279
Target Start/End: Complemental strand, 12390818 - 12390687
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || ||||||  | |  ||||||||| || |||||||||||||||||| |||| | |||||||||||| | | ||||||||| ||     
T  12390818 aaggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatc-ccactgtttgtgcag 12390720  T
Q  247 tgacattaaaaattcagttctcatagtattatc 279  Q
    |||||| |||| ||  || | ||||||||||||    
T  12390719 tgacatcaaaagttatgtccccatagtattatc 12390687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 26524516 - 26524447
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaat 215  Q
    ||||||||||||||| || |||||| || |||||||||| | || | |||||||||||||||| ||||||    
T  26524516 taaggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaat 26524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 8861260 - 8861385
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| || |||||||||| | |  |||||||||||||| ||| |||| | | |||| ||||||| | |||||||||||| ||    
T  8861260 ggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacacc-ccactgtttgtacagtg 8861358  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
     ||| |||| || ||| | ||||||||    
T  8861359 gcatcaaaagttaagtccccatagtat 8861385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 34362334 - 34362210
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || || | | || |||||||||| |||  |||||||||||||| ||| |||| | |  ||||||||||| | |||||||||||| ||    
T  34362334 ggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaacactatagcatcaaaagtgttgtgagtaacacc-ccactgtttgtacagtg 34362236  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
     || | ||| |||||||||||||||||    
T  34362235 gca-tcaaagttcagttctcatagtat 34362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 8299192 - 8299245
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactata 204  Q
    |||||||||| || |||||| ||||||||||||| | || ||||||||||||||    
T  8299192 aaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactata 8299245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 29173599 - 29173640
Alignment:
Q  234 actgtttgtacaatgacattaaaaattcagttctcatagtat 275  Q
    ||||||||||||||||||| |||| |||||| ||||||||||    
T  29173599 actgtttgtacaatgacatcaaaagttcagtcctcatagtat 29173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 275
Target Start/End: Original strand, 15752027 - 15752150
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || |||||| || |||||||||||| || |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| |    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctc-actgtttgtacaatggc 15752125  T
Q  251 attaaaaattcagttctcatagtat 275  Q
    || |||| |||||| ||||||||||    
T  15752126 atcaaaagttcagtcctcatagtat 15752150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 18422646 - 18422768
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || ||||||  |||||||||||||| || |||||||||||||||||| |||||||||| |||||||||| | || |||||||||||    
T  18422646 aggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacacc-ccaccgtttgtacaat 18422744  T
Q  248 gacattaaaaattcagttctcata 271  Q
    ||||| |||| |||||| ||||||    
T  18422745 gacatcaaaagttcagtcctcata 18422768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 37619078 - 37618949
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacac-cactactgtttgtaca 245  Q
    |||||||||||||| || |||| |  | |||||||||||| || |||||||||||||||||| |||||| |||||||||| || | | |||||||||| |    
T  37619078 aaggaaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaaa 37618979  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
    ||||||| |||| |||||||||||||||||    
T  37618978 atgacatcaaaagttcagttctcatagtat 37618949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 275
Target Start/End: Original strand, 8222124 - 8222249
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    ||||||||||||||  || ||||||  |||||||| |||||||| |||||||||||||||||| |||||| |||||||||||||||| || ||   ||||    
T  8222124 taaggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatgtaatgagtaacaccac-accgt---taca 8222219  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
    ||| ||| |||| |||||||||||||||||    
T  8222220 atggcatcaaaagttcagttctcatagtat 8222249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 10182189 - 10182063
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| ||||||||||||||| || ||||||| ||| |||||||||||||||| || |||||| | | |||||||||||| |    
T  10182189 aggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaaca-cgccactgtttgtacagt 10182091  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    | ||| |||| |||||| ||||||||||    
T  10182090 ggcatcaaaagttcagtcctcatagtat 10182063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 28564938 - 28564836
Alignment:
Q  172 gaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcata 271  Q
    |||||||| ||||||  | |||||||||||||||||| |||||| ||||||||||||||  |||||||||||||||||||| |||| |||||| ||||||    
T  28564938 gaaaatgatttttttgatgaagttaacactataacatcaaaaatgtaatgagtaacacc-ttactgtttgtacaatgacatcaaaagttcagtcctcata 28564840  T
Q  272 gtat 275  Q
    ||||    
T  28564839 gtat 28564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 275
Target Start/End: Original strand, 10922719 - 10922848
Alignment:
Q  145 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 244  Q
    |||| ||||||| ||| || || ||| || ||||| |||||| || ||||||||||||||||||||||||| |||||||||| ||| | |||||||||||    
T  10922719 ataacgaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaagacc-ccactgtttgtac 10922817  T
Q  245 aatgacattaaaaattcagttctcatagtat 275  Q
    |||||||| |||| |||| | ||||||||||    
T  10922818 aatgacatcaaaagttcaatcctcatagtat 10922848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 285
Target Start/End: Original strand, 32267028 - 32267165
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||| ||| || ||||||  | |||||||||||| || ||||||||| |||||||| |||||| |||||||||||||| | |||||||||||||    
T  32267028 aaggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacacc-ccactgtttgtacaa 32267126  T
Q  247 tgacattaaaaattcagttctcatagtattatctaccca 285  Q
    |||||| |||| |||| | |||||| ||| ||| |||||    
T  32267127 tgacatcaaaagttcactcctcatattatcatcaaccca 32267165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 1547281 - 1547408
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||| || |||||||||| | || ||||||||||||||||||||||||| |  ||||||||| | | ||||||||| ||     
T  1547281 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaaca-ctccactgtttgtgcag 1547379  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    || ||| |||| |||||||||||||||||    
T  1547380 tggcatcaaaagttcagttctcatagtat 1547408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 37451306 - 37451396
Alignment:
Q  173 aaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    |||||||||||||| || |||||||||||||||||| |||||| |||| ||||||||| |||| |||||||||||||||| |||| ||||||    
T  37451306 aaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacacc-ctaccgtttgtacaatgacatcaaaagttcagt 37451396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 279
Target Start/End: Original strand, 23999343 - 23999472
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||| ||| || ||||||  | ||||| |||||| || |||||||||||| |||||||||||||||| |||||||||| | ||| |||||| ||||    
T  23999343 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactacaacataaaaaatataacgagtaacacc-ccactatttgtagaatg 23999441  T
Q  249 acattaaaaattcagttctcatagtattatc 279  Q
    |||| |||| |||||  ||||||||||||||    
T  23999442 acatcaaaagttcagccctcatagtattatc 23999472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 51128884 - 51128969
Alignment:
Q  178 gacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||| | | || |||||||||||||||| |||| ||||||    
T  51128884 gacttttttagtgaagttaacactataacataaaaaatgtaatgagtaaca-ctccaccgtttgtacaatgacatcaaaagttcagt 51128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 30327132 - 30327007
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || ||||||  |||||||||||||| || || ||||||||||||||| |||||| |||||||||| ||| | || |||||||||||     
T  30327132 ggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacc-caaccgtttgtacaata 30327034  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
     ||| |||| ||||||  |||||||||    
T  30327033 gcatcaaaagttcagtcatcatagtat 30327007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 42721035 - 42721160
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| |||||||| |||||| || |||||| | ||||| ||||||||||||| ||||||||||| | |||||||||||| |     
T  42721035 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacacc-ccactgtttgtacagta 42721133  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||| | | ||||||||    
T  42721134 acatcaaaagttcaatccccatagtat 42721160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 273
Target Start/End: Original strand, 2959743 - 2959867
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || | ||||||| | | |||||||||||| |    
T  2959743 aggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatc-ccactgtttgtacagt 2959841  T
Q  248 gacattaaaaattcagttctcatagt 273  Q
    ||||| |||| |||||| ||||||||    
T  2959842 gacatcaaaagttcagtcctcatagt 2959867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 15382927 - 15383043
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||| |  |||||||||||||| || || ||||||||||||||| |||||| |||||||||||| | | || ||||||||||    
T  15382927 aaggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatc-ccaccgtttgtacaa 15383025  T
Q  247 tgacattaaaaattcagt 264  Q
    || ||| |||| ||||||    
T  15383026 tgtcatcaaaagttcagt 15383043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 19899950 - 19899824
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || ||||||  | ||||| |||||| || |||||||||||||||||| |||||| ||| |||||||||| | |||||||||| |||    
T  19899950 aggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctc-actgtttgtagaat 19899852  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    | ||| |||| ||||   ||||||||||    
T  19899851 ggcatcaaaagttcaaccctcatagtat 19899824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 30254419 - 30254544
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||| |  | ||||||||||||  | ||||||||| |||||||| |||||| |||||||||| | ||| ||||||||||||||    
T  30254419 aggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaata-cac-actgtttgtacaat 30254516  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| |||||| |||| |||||    
T  30254517 gacatcaaaagttcagtcctcaaagtat 30254544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 275
Target Start/End: Complemental strand, 238690 - 238568
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || |||||| |||||| |||||||| || ||||||||||||||  || |||||| |  |||||||||   | |||||||||||||||||    
T  238690 aaaattctatagtgaagtcacgaaaataacttttttggtgaagttaacactatagtattaaaaatgttgtgagtaaca--tccactgtttgtacaatgac 238593  T
Q  251 attaaaaattcagttctcatagtat 275  Q
    || |||| |||||| | ||||||||    
T  238592 atcaaaagttcagtccccatagtat 238568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 275
Target Start/End: Original strand, 28769651 - 28769773
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || ||||||  ||||| |||||||| || ||||||||||||| |||| |||||| |||||||||||||  | || |||||||||||| |    
T  28769651 aaaattctatggtgaagtcataaaaataactttttttgtgaagttaacactatgacatcaaaaatgtaatgagtaacac--ccaccgtttgtacaatggc 28769748  T
Q  251 attaaaaattcagttctcatagtat 275  Q
    || |||  ||| || ||||||||||    
T  28769749 atcaaaggttcggtcctcatagtat 28769773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 27564053 - 27563956
Alignment:
Q  181 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtattatc 279  Q
    ||||||||| |||||||||||||||| | ||||||||| ||||||||| | | |||||||||| | |||||| |||| ||||||||  ||| |||||||    
T  27564053 ttttttagtgaagttaacactataactttaaaaatatagtgagtaaca-ctccactgtttgtatagtgacatcaaaagttcagttccgataatattatc 27563956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 30254853 - 30254952
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || ||||||  | ||||||||||||  | |||||||||||||||||| |||||| |||||  ||||||  | ||||||||||||||    
T  30254853 aggaaaattctatggtgaagtcataataatgacttttttgatgaagttaacactataacatcaaaaatgtaatggataacac--ccactgtttgtacaat 30254950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 3309144 - 3309225
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    |||||||||||| ||||||||| || |||||||||| | || |||||||||||||||||| |||| | |  |||||||||||    
T  3309144 ggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaacacc 3309225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 275
Target Start/End: Original strand, 32216093 - 32216176
Alignment:
Q  191 aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 275  Q
    |||||||||||||||||| |||||| || ||||||||| ||| ||||||||||||||| | | |||| |||||| ||| ||||||    
T  32216093 aagttaacactataacatcaaaaatgtagtgagtaaca-caccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtat 32216176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 27763458 - 27763366
Alignment:
Q  181 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 275  Q
    |||||| || |||||||||||||||||| |||||| ||||||||||||||  ||  ||||||| |||||||| |||| | |||  ||||||||||    
T  27763458 tttttttgtgaagttaacactataacatcaaaaatgtaatgagtaacacccata--gtttgtagaatgacatcaaaagtccagccctcatagtat 27763366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 262
Target Start/End: Complemental strand, 9903211 - 9903122
Alignment:
Q  172 gaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattca 262  Q
    |||||||||||||||  | |||||||||||||||||| |||| | || ||||||||||| |  ||||||||||| |||||| |||| ||||    
T  9903211 gaaaatgacttttttgatgaagttaacactataacatcaaaactgtagtgagtaacacc-ccgctgtttgtacagtgacatcaaaagttca 9903122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 22170748 - 22170814
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 213  Q
    |||||||||||||| || || ||| ||||||||||||| || | |||||||||||||||||| ||||    
T  22170748 aaggaaaattctatggtgaaatcatgaaaatgacttttctaatgaagttaacactataacatcaaaa 22170814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 46931439 - 46931520
Alignment:
Q  181 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 263  Q
    |||||| || |||||||||||||||||| |||||| |||||||||| ||| | |||||||||| || | ||| ||||||||||    
T  46931439 tttttttgtgaagttaacactataacatcaaaaatgtaatgagtaatacc-ccactgtttgtagaacggcatcaaaaattcag 46931520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 7079254 - 7079173
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    |||||||| ||| ||||||||| || |||||||||||| || ||||||||||||||| || |||| | |  |||||||||||    
T  7079254 ggaaaattttatggtaaagtcatgataatgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacacc 7079173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 48620631 - 48620747
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    ||||||||||||||  | |||| |  |||||||||||| | || ||||||||| |||||||| |||| | |  ||||||||||| | ||||||||||||     
T  48620631 aaggaaaattctatgttgaagttattaaaatgacttttcttgtgaagttaacaatataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacag 48620729  T
Q  247 tgacattaaaaattcagt 264  Q
    |||||| |||| ||||||    
T  48620730 tgacatcaaaagttcagt 48620747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 16415639 - 16415755
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||  || |||||| || |||||||||| | || |||||||||||||| ||| |||| | || |||||||||||   | ||||||||||     
T  16415639 aaggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacag 16415738  T
Q  247 tgacattaaaaattcag 263  Q
    || ||| |||| |||||    
T  16415739 tggcatcaaaagttcag 16415755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 38823210 - 38823274
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 213  Q
    |||||||||||| || |||||| || |||||||||| | ||||||||||||||||| ||| ||||    
T  38823210 ggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaa 38823274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 34012559 - 34012477
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacac 229  Q
    |||||||||||||| || |||||| ||||||||| ||| |  | |||||||||||||||||| || | | || ||||||||||    
T  34012559 aaggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacac 34012477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 3534926 - 3535042
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    ||||||||||||||  | ||||||  | ||| | |||| |||| |||||||||||||||||| |||| | |  |||||||||||  |||||||||| ||     
T  3534926 aaggaaaattctattatgaagtcattagaattaattttctagtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ttactgtttgtgcag 3535024  T
Q  247 tgacattaaaaattcagt 264  Q
    |||||| |||| ||||||    
T  3535025 tgacatcaaaagttcagt 3535042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 11742532 - 11742416
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||| |||||| |||| | || |||||||||| | || ||||||||||||||  || |||| | |  | ||||||||| | ||||||||||||     
T  11742532 aaggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacacc-ccactgtttgtacag 11742434  T
Q  247 tgacattaaaaattcagt 264  Q
    |||||| |||| ||||||    
T  11742433 tgacatcaaaagttcagt 11742416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 264
Target Start/End: Complemental strand, 27267361 - 27267265
Alignment:
Q  165 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    |||||| || ||||| |||||| || ||||||||||||   |||||||||| || ||||| ||||| | |||||||||||| || |||||||| ||||||    
T  27267361 aagtcatgagaatgatttttttggtgaagttaacactag--cataaaaaatgtagtgagtgacacccc-actgtttgtacagtggcattaaaagttcagt 27267265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 4953526 - 4953395
Alignment:
Q  12 cccttttaaactggtcttcatgcggtcatctatcataaggaattattggttctaagagttttctatttttaaaattgtatatgaaattgggtaaggaccc 111  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||  ||||| |||||||  |||| || |||||| ||||||    
T  4953526 cccttttaaactggtcttcatgccgtcatatatcataagaaattattagttctaagagtttttaattttcaaaattgcttatgtaa-tgggtagggaccc 4953428  T
Q  112 caagataccacaactcttctataggattgacaca 145  Q
    |||||||  ||||||||| |||||||||||||||    
T  4953427 caagata-aacaactcttatataggattgacaca 4953395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 10555393 - 10555268
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||  || |||||| || |||||||||||| || ||||||||||||||||||||||||| |||||||||||| | | |||||||||||||||    
T  10555393 ggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaaca-ctccactgtttgtacaatg 10555295  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||| | ||||||||||    
T  10555294 acatcaaaagttcaatcctcatagtat 10555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 275
Target Start/End: Complemental strand, 23854606 - 23854497
Alignment:
Q  165 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    |||||| || |||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||| |||| ||||||    
T  23854606 aagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-caactgtttgtgcaatgacatcaaaagttcagt 23854508  T
Q  265 tctcatagtat 275  Q
     ||||||||||    
T  23854507 cctcatagtat 23854497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 12876108 - 12876233
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| ||||||||||||| |  | ||||||||||||||| ||||||||| |  ||||||||||| | |||||||||||||||    
T  12876108 ggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacc-caactgtttgtacaatg 12876206  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||| ||||||||||    
T  12876207 acatcaaaagttcagtcctcatagtat 12876233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 275
Target Start/End: Complemental strand, 36695160 - 36695032
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    ||||||||||||||| || |||||||||||||||||||| |  | ||||||||||||||| || |||||| |  ||||||||||| | ||||||||||||    
T  36695160 taaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacacc-ccactgtttgtaca 36695062  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
    ||||||| |||| |||||| | ||||||||    
T  36695061 atgacatcaaaagttcagtccccatagtat 36695032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 43643788 - 43643684
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||| || ||||||| |||| || |||||||||||||||||| |||||| |||||||||||| | |||||||||||||||    
T  43643788 aaggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaaca-ctctactgtttgtacaa 43643690  T
Q  247 tgacat 252  Q
    ||||||    
T  43643689 tgacat 43643684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 1204924 - 1205051
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||| ||  || |||||| || |||||||||| | || ||||||||||||||||||||||||| || ||||||||| ||  |||||||||||||    
T  1204924 aaggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaaca-catcactgtttgtacaa 1205022  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    |||||| |||| |||||| ||||||||||    
T  1205023 tgacatcaaaagttcagtcctcatagtat 1205051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 37970704 - 37970585
Alignment:
Q  155 ttctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacatta 254  Q
    |||||| || |||||| || |||||||||||| || |||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||| ||| |    
T  37970704 ttctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccactgtttgtacaatgccatca 37970606  T
Q  255 aaaattcagttctcatagtat 275  Q
    ||| |||||  ||||||||||    
T  37970605 aaagttcagccctcatagtat 37970585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 6098709 - 6098584
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| |||||| |||||||| || ||||||| |||||| ||| ||||||||| ||||||||||| | |||||||||||| ||    
T  6098709 ggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacacc-ccactgtttgtacagtg 6098611  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||| | ||||||||    
T  6098610 acatcaaaagttcagtccccatagtat 6098584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 1150297 - 1150171
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || ||||||  | |||||||||||| || |||||||| ||||||||| |||||| |||||||||||| | | |||||||||||||     
T  1150297 aggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatc-ccactgtttgtacaac 1150199  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| ||||||  |||||||||    
T  1150198 gacatcaaaagttcagtcatcatagtat 1150171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 9864145 - 9864261
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    ||||||||||||||  | |||||| ||||||||||||||| || || |||||||||||  || |||||| |  ||||||||||| | |||||||||||||    
T  9864145 aaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacacc-ccactgtttgtacaa 9864243  T
Q  247 tgacattaaaaattcagt 264  Q
    |||||| |||| ||||||    
T  9864244 tgacatcaaaagttcagt 9864261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 16222860 - 16222987
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||  || || ||| || |||||||||| | || || ||||||||||||||||||||||||| ||||||   || | || ||||||||||    
T  16222860 aaggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttcc-ccacagtttgtacaa 16222958  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    |||||| |||| |||||| ||||||||||    
T  16222959 tgacatcaaaagttcagtcctcatagtat 16222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 263
Target Start/End: Complemental strand, 30654775 - 30654661
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||| ||| || ||||||  | | ||| |||||| || ||||||||||||||||||||||||| |||||||||||||| | |||||||||  |||    
T  30654775 aggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccactgtttgttgaat 30654677  T
Q  248 gacattaaaaattcag 263  Q
    ||||| |||| |||||    
T  30654676 gacatcaaaagttcag 30654661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 279
Target Start/End: Original strand, 13307622 - 13307751
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| || ||||| |||| | || |||||||||||||||||| |||| | |  ||||||||||| | ||| |||||||| ||    
T  13307622 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctc-actatttgtacagtg 13307720  T
Q  249 acattaaaaattcagttctcatagtattatc 279  Q
    |||| |||| |||||| | ||||||||||||    
T  13307721 acatcaaaagttcagtccccatagtattatc 13307751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 264
Target Start/End: Complemental strand, 31934076 - 31933963
Alignment:
Q  150 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 249  Q
    |||||||||| ||| |||| | || ||||| |||||| || ||||||||||||| | || ||||||||||||||||||||| | ||| ||| ||||||||    
T  31934076 gaaaattctaacgtgaagttatgagaatgatttttttggtgaagttaacactatgatatcaaaaatataatgagtaacacc-ccactctttatacaatga 31933978  T
Q  250 cattaaaaattcagt 264  Q
    ||| |||| ||||||    
T  31933977 catcaaaagttcagt 31933963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 40862416 - 40862533
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacat-aaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    |||||||||||||| || |||||| |||||| |||||| | || ||||||||||||||| || ||||||| |  ||||||||||| | ||||||||||||    
T  40862416 aaggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacacc-ccactgtttgtaca 40862514  T
Q  246 atgacattaaaaattcagt 264  Q
    ||| ||| |||| ||||||    
T  40862515 atggcatcaaaagttcagt 40862533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 16447067 - 16446959
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || ||||||||||| | |||||||||| |||    
T  16447067 aggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacacc-ccactgtttgtataat 16446969  T
Q  248 gacattaaaa 257  Q
    | ||| ||||    
T  16446968 ggcatcaaaa 16446959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 264
Target Start/End: Complemental strand, 34952223 - 34952108
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| |||||||||  |||||||||||| | || |||||||||||||| ||| |||| | |  ||||||||| | | |||||||||||| |    
T  34952223 aggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagc-ccactgtttgtacagt 34952125  T
Q  248 gacattaaaaattcagt 264  Q
    ||||| |||| ||||||    
T  34952124 gacatcaaaagttcagt 34952108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 8803974 - 8803888
Alignment:
Q  176 atgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 263  Q
    ||||||||||| || |||||||||||||||||| |||||| |||||||||||| | | ||| |||||| |||||||| |||| |||||    
T  8803974 atgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaaca-ctccactatttgtagaatgacatcaaaagttcag 8803888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 27083030 - 27082904
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || ||||||  | | |||||||| | || |||||||||||||| ||| |||| | || ||||||||||| | ||||||||| || |    
T  27083030 aggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacacc-ccactgtttgtgcagt 27082932  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    | |||||||| |||||| ||||||||||    
T  27082931 ggcattaaaagttcagtcctcatagtat 27082904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 7891137 - 7891072
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaata 216  Q
    |||||||||| || |||||| || |||||||||||| || |||||||||||||||||| |||||||    
T  7891137 aaaattctatggtgaagtcatgagaatgactttttttgtgaagttaacactataacatcaaaaata 7891072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 38643975 - 38644058
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    |||||||||||||| || || ||| || |||||||||||| || |||||||||||||||||| |||| | |  |||||||||||    
T  38643975 aaggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacacc 38644058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 5300137 - 5300012
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| || ||||||||||||| | |||||||||||||| ||| |||| | |  | |||| || | |||||||||||||| ||    
T  5300137 ggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaagtgttgtaagtagca-ctctactgtttgtacagtg 5300039  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
     ||| |||| |||||| || |||||||    
T  5300038 gcatcaaaagttcagtccttatagtat 5300012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 34894964 - 34895046
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacac 229  Q
    |||||||||||||| || |||||| ||||||||||||| |  | |||||||||||||||||| || | | || ||||||||||    
T  34894964 aaggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacac 34895046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 465843 - 465955
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||| ||| || ||||||  |||||||||||| | || |||||||||| ||||||| |||| | |  ||||||||||| | |||||||||||| || |    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacagtggc 465941  T
Q  251 attaaaaattcagt 264  Q
    || |||||||||||    
T  465942 atcaaaaattcagt 465955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 15009241 - 15009306
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaa 214  Q
    |||||||||||| || ||||||  | |||||||||||| || |||||||||||||||||| |||||    
T  15009241 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaa 15009306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 35459888 - 35459823
Alignment:
Q  150 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaat 215  Q
    ||||||||||| || |||||| || |||||||||||| || ||||||| ||||||| |||||||||    
T  35459888 gaaaattctatggtgaagtcatgagaatgacttttttcgtaaagttaatactataatataaaaaat 35459823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 24823467 - 24823407
Alignment:
Q  145 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataa 205  Q
    ||||||||||| |||| ||||||| | || |||||||||||| || |||||||||||||||    
T  24823467 ataaggaaaatactatggtaaagttatgagaatgacttttttggtgaagttaacactataa 24823407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 41362517 - 41362639
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||| | ||||||||||||||| || ||||||||||  || ||| |||||| || ||||||||||| | ||| |||||| | ||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacac--tagcat-aaaaatgtagtgagtaacacc-ccactatttgtatagtg 41362612  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||  ||||||||||    
T  41362613 acatcaaaagttcagacctcatagtat 41362639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 274
Target Start/End: Complemental strand, 4133199 - 4133077
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||| ||| || ||||||  | |||||||||||| || ||||||||||  || ||||||||| ||| ||||||| |||   |||||||||||| ||    
T  4133199 ggaaaattttatggtcaagtcatcagaatgacttttttggtgaagttaacac--tagcataaaaaagatagtgagtaatacc-tgactgtttgtacagtg 4133103  T
Q  249 acattaaaaattcagttctcatagta 274  Q
     ||| |||| |||||| |||||||||    
T  4133102 gcatcaaaagttcagtcctcatagta 4133077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 1149762 - 1149698
Alignment:
Q  210 aaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 275  Q
    |||||| |||||||||||| | | ||||||||||||||||||| |||| ||| || ||||||||||    
T  1149762 aaaaatgtaatgagtaacaaccc-actgtttgtacaatgacatcaaaagttctgtcctcatagtat 1149698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 279
Target Start/End: Original strand, 5627389 - 5627520
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||  || ||||||  | |||||||||||| || |||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||    
T  5627389 aaggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacacc-ccactatttgtagaa 5627487  T
Q  247 tgacattaaaaattcagttctcatagtattatc 279  Q
    |||||| |||| |||||  ||||||||||||||    
T  5627488 tgacatcaaaagttcagccctcatagtattatc 5627520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 275
Target Start/End: Original strand, 1945829 - 1945959
Alignment:
Q  145 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgta 243  Q
    |||||||||||||||  || ||||||  | |||||||||||| | | |||||||||||||||||| |||||| |||||||||||||| | ||||||||||    
T  1945829 ataaggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccactgtttgta 1945927  T
Q  244 caatgacattaaaaattcagttctcatagtat 275  Q
     |||||||| |||| |||||  ||||||||||    
T  1945928 gaatgacatcaaaagttcagccctcatagtat 1945959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 4319009 - 4318895
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||| || |||||||||||| || |||||||||||||||||| |||| | | |||||||||||| | ||||||||||||     
T  4319009 aaggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacacc-ccactgtttgtacag 4318911  T
Q  247 tgacattaaaaattca 262  Q
    |||||| |||| ||||    
T  4318910 tgacatcaaaagttca 4318895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 7055400 - 7055274
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||| ||| || ||||||  | ||||| |||||| || |||||||||||||||||||||||||||||| ||||||||| | ||| |||||| |||    
T  7055400 aggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactataacataaaaaatataattagtaacacctc-actatttgtagaat 7055302  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| |||||  ||||||||||    
T  7055301 gacatcaaaagttcagccctcatagtat 7055274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 264
Target Start/End: Complemental strand, 33893186 - 33893072
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| |||||||||  | ||| | ||||||||| |||||||||||||||||| |||| | |  ||||||||||| | ||| |||||||||||    
T  33893186 ggaaaattctatggtaaagtcattagaataatttttttagtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactatttgtacaatg 33893088  T
Q  249 acattaaaaattcagt 264  Q
    | ||||||| ||||||    
T  33893087 atattaaaagttcagt 33893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 264
Target Start/End: Original strand, 8513232 - 8513347
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| || |||||||||| | || ||||||||||||||| || |||| | |  ||||||||||| | |||||||||||| |    
T  8513232 aggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacacc-ccactgtttgtacagt 8513330  T
Q  248 gacattaaaaattcagt 264  Q
    ||||| |||| ||||||    
T  8513331 gacatcaaaagttcagt 8513347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 3880124 - 3879998
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| || |||||||||| | || ||||||||| ||||  || |||| | |  ||||||||||| ||||||||||||||||    
T  3880124 aggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacacc-ctactgtttgtacaat 3880026  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| |||| | | ||||||||    
T  3880025 gacatcaaaagttcaatccccatagtat 3879998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 275
Target Start/End: Complemental strand, 6091363 - 6091242
Alignment:
Q  152 aaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgaca 251  Q
    ||||||||| || |||||| |||||| | |||||| || ||||||||| | ||||||||||||| || |||||||||| || | ||||||||||||| ||    
T  6091363 aaattctattgtgaagtcatgaaaataatttttttggtaaagttaaca-tgtaacataaaaaatgtagtgagtaacac-accattgtttgtacaatgcca 6091266  T
Q  252 ttaaaaattcagttctcatagtat 275  Q
    | |||| |||||| ||| ||||||    
T  6091265 tcaaaagttcagtactcgtagtat 6091242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 279
Target Start/End: Complemental strand, 7235218 - 7235090
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||| | || ||||||||||   || |||| ||||||||||||| |||| | || |||||| |||| | |||||||||||  ||    
T  7235218 ggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaagtgtagtgagtagcacc-ccactgtttgtacggtg 7235120  T
Q  249 acattaaaaattcagttctcatagtattatc 279  Q
     ||| |||| ||||| |||||||||||||||    
T  7235119 ccatcaaaagttcag-tctcatagtattatc 7235090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 275
Target Start/End: Complemental strand, 21017280 - 21017171
Alignment:
Q  165 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    |||||| ||||||||||||||| || ||||||||| | ||  ||||||||| |  ||||||||||| | | | ||||||||||| ||| |||| ||||||    
T  21017280 aagtcacgaaaatgacttttttggtgaagttaacattgtagtataaaaaatgttgtgagtaacacc-ccattatttgtacaatggcatcaaaagttcagt 21017182  T
Q  265 tctcatagtat 275  Q
     | ||||||||    
T  21017181 ccccatagtat 21017171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 24662238 - 24662189
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaac 198  Q
    |||||||||||| ||||||||| || |||||||||| |||| ||||||||    
T  24662238 ggaaaattctatggtaaagtcatgataatgacttttctagtgaagttaac 24662189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 34361704 - 34361589
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || ||||||  | |||||||||||| || ||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||    
T  34361704 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacc-ccactgtttgtagaa 34361606  T
Q  247 tgacattaaaaattcag 263  Q
    ||||||||||| |||||    
T  34361605 tgacattaaaagttcag 34361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 50697240 - 50697360
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||  || ||||||  ||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  50697240 aaggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacacc-ctaccgtttgtacaa 50697338  T
Q  247 tgacattaaaaattcagttctc 268  Q
    |||||| |||| |||| |||||    
T  50697339 tgacatcaaaagttcaattctc 50697360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 4396324 - 4396407
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    |||||||||||||| || ||||||  ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4396324 aaggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacacc 4396407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 25184112 - 25184215
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| || ||||||| |||| || |||||||||||||||||| |||||| |||||||||||| | ||||||||||||||||    
T  25184112 aggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaaca-ctctactgtttgtacaat 25184210  T
Q  248 gacat 252  Q
    |||||    
T  25184211 gacat 25184215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 25701270 - 25701143
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||| ||| || |||||| || |||||||||||| || ||||||||| |||||||| |||| | || ||||||||||| ||||||||||||||     
T  25701270 aaggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacacc-ctactgtttgtacag 25701172  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    |||||| |||| |||||| ||||||||||    
T  25701171 tgacatcaaaagttcagtcctcatagtat 25701143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 275
Target Start/End: Complemental strand, 55478110 - 55477977
Alignment:
Q  145 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaaca--ccact-actgtttg 241  Q
    |||||||||||||||| || |||||| || ||||| |||||| || |||||||||||||||||| |||||| ||| ||||||||  |||||   ||||||    
T  55478110 ataaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttg 55478011  T
Q  242 tacaatgacattaaaaattcagttctcatagtat 275  Q
    ||||||||||| |||| |||||| ||||||||||    
T  55478010 tacaatgacatcaaaagttcagtcctcatagtat 55477977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 3042609 - 3042725
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || || |||  ||||||| |||||| || ||||||||||||||||||| ||||| |||||||||| ||| | || |||| |||||    
T  3042609 aaggaaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatgtaatgagtaatacc-ccaccgtttatacaa 3042707  T
Q  247 tgacattaaaaattcagt 264  Q
    |||||| |||||||||||    
T  3042708 tgacatcaaaaattcagt 3042725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 32912793 - 32912678
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || ||||||  | |||||||||||| || |||||||||||||||||| |||||| |||||||||||||| ||| | |||||| ||    
T  32912793 aaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ctagtatttgtagaa 32912695  T
Q  247 tgacattaaaaattcag 263  Q
    ||| || |||| |||||    
T  32912694 tgatatcaaaagttcag 32912678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 151 - 275
Target Start/End: Complemental strand, 36493897 - 36493774
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || |||||| |||||| |||||||| || ||||||| |||||| ||| ||||||||| ||||||||||| | | |||||||||| ||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacacc-ccattgtttgtacagtgac 36493799  T
Q  251 attaaaaattcagttctcatagtat 275  Q
    || |||| |||||| | ||||||||    
T  36493798 atcaaaagttcagtccccatagtat 36493774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 37663951 - 37663827
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || ||||||  | ||||||||||||  | ||||||||||||  |||| |||| | |||||||||||||| | ||||||||||||||    
T  37663951 aggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacacta--acattaaaactgtaatgagtaacacccc-actgtttgtacaat 37663855  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| |||||| ||||||||||    
T  37663854 gacatcaaaagttcagtcctcatagtat 37663827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 19089664 - 19089539
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || ||||||  | ||| ||||||||  | ||||||||||||||| || |||| | |||||||||||||| | |||||||||| ||||    
T  19089664 ggaaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataatatcaaaattgtaatgagtaacacc-ccactgtttgtataatg 19089566  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||| ||||||||||    
T  19089565 acatcaaaagttcagtcctcatagtat 19089539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 145 - 275
Target Start/End: Original strand, 27396612 - 27396741
Alignment:
Q  145 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 244  Q
    ||||| |||||||||| || |||||| || |||||||||| | || ||||||||| |||| ||| |||| | | |||||||||||| |||||||||||||    
T  27396612 ataagaaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacacc-ctactgtttgtac 27396710  T
Q  245 aatgacattaaaaattcagttctcatagtat 275  Q
    |||||||| |||| ||  || ||||||||||    
T  27396711 aatgacatcaaaagtttcgtcctcatagtat 27396741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 245
Target Start/End: Complemental strand, 35021248 - 35021151
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    |||||||||||||| || |||||| ||||||||||||| | || ||||||||| |||||||| |||||| || ||||||||| ||| ||||||||||||    
T  35021248 aaggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaaca-caccactgtttgtaca 35021151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 4205114 - 4205218
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||||||||||||||||| |  | ||||||||||||||| || |||||| |  ||| ||||||| | |||||||||||||    
T  4205114 aaggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacacc-ccactgtttgtacaa 4205212  T
Q  247 tgacat 252  Q
    ||||||    
T  4205213 tgacat 4205218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 271
Target Start/End: Complemental strand, 19440860 - 19440738
Alignment:
Q  149 ggaaaattctatcgt-aaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    |||||||||||| || ||||||| || |||||||||||| || | |||||||||||||||| |||||| |||||| ||||| | | || |||||||||||    
T  19440860 ggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaaca-ctccaccgtttgtacaat 19440762  T
Q  248 gacattaaaaattcagttctcata 271  Q
    | ||| |||| |||||| ||||||    
T  19440761 ggcatcaaaagttcagtcctcata 19440738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 53124311 - 53124368
Alignment:
Q  173 aaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    ||||||| |||||| || |||||||||||||||||| |||||||||||||||||||||    
T  53124311 aaaatgatttttttggtgaagttaacactataacatcaaaaatataatgagtaacacc 53124368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 7703517 - 7703642
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    ||||||||||||  |||||||| || |||||||||| | || |||||||||||||||||| |||| | |  | ||||||||| | |||||||||||  ||    
T  7703517 ggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacacc-ccactgtttgtacggtg 7703615  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||| | ||||||||    
T  7703616 acatcaaaagttcagtccccatagtat 7703642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 275
Target Start/End: Original strand, 9139244 - 9139370
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    ||||||||||||||| || |||||| |||| |||||||||| || ||||||||  |||| ||||||||  ||| ||||||||||| | || |||||||||    
T  9139244 taaggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaa--atagtgagtaacacc-ccaccgtttgtaca 9139340  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
     |||||| |||| |||| | | ||||||||    
T  9139341 gtgacataaaaagttcaatccccatagtat 9139370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 879760 - 879652
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||| ||  || |||||| || ||| | |||||| || |||| ||||||||||||| |||||| |||||||||||||| | | ||||||||||||    
T  879760 aggaaaattttaaggtgaagtcatgagaataatttttttggtgaagtaaacactataacatcaaaaatgtaatgagtaacacctc-attgtttgtacaat 879662  T
Q  248 gacattaaaa 257  Q
    ||||| ||||    
T  879661 gacatcaaaa 879652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 29584411 - 29584286
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||  |  |||||||||| | || |||||||||||||||||| |||| | |  ||||||||||| | |||||||||||||    
T  29584411 aaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacctc-actgtttgtacaa 29584315  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    || ||| |||| ||||||  |||||||||    
T  29584314 tggcatcaaaagttcagtcttcatagtat 29584286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 275
Target Start/End: Original strand, 47253751 - 47253873
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || |||||| || |||||||||||| || |||||||||||||| ||| |||| | |  ||||||||||  | | ||||| |||| ||||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaacac--ccattgtttatacagtgac 47253848  T
Q  251 attaaaaattcagttctcatagtat 275  Q
    || |||| |||||| ||||||||||    
T  47253849 atcaaaagttcagtcctcatagtat 47253873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 7152319 - 7152236
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    |||||||||||||| || |||||| |  |||||||||| | || ||||||||| |||||||| |||| |||| |||||||||||    
T  7152319 aaggaaaattctatggtgaagtcatgctaatgacttttctggtaaagttaacattataacatcaaaagtatagtgagtaacacc 7152236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 17167715 - 17167825
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || |||| | ||||||||||||| |  | ||||||||| ||||| || |||||| |  ||||||||||| | |||||||||||||||||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacacc-ccactgtttgtacaatgac 17167813  T
Q  251 attaaaaattca 262  Q
    || |||| ||||    
T  17167814 atcaaaagttca 17167825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 17173292 - 17173402
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || |||| | ||||||||||||| |  | ||||||||| ||||| || |||||| |  ||||||||||| | |||||||||||||||||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacacc-ccactgtttgtacaatgac 17173390  T
Q  251 attaaaaattca 262  Q
    || |||| ||||    
T  17173391 atcaaaagttca 17173402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 264
Target Start/End: Original strand, 39397918 - 39398032
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || ||||||  | |||||||||| | || |||||||||||||||||| |||| | |  ||||||||||| | | |||||||||| ||    
T  39397918 ggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacacc-ccattgtttgtacagtg 39398016  T
Q  249 acattaaaaattcagt 264  Q
    |||| |||| ||||||    
T  39398017 acatcaaaagttcagt 39398032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 275
Target Start/End: Original strand, 6864061 - 6864160
Alignment:
Q  175 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagta 274  Q
    |||||||||||| || |||||| ||||||||||| |||||| |||||| ||||| | | ||| ||||||||||  ||| |||| | |||| |||||||||    
T  6864061 aatgacttttttggtgaagttatcactataacatcaaaaatttaatgaataacatc-caactttttgtacaatagcatcaaaagtccagtcctcatagta 6864159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 37287732 - 37287855
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaa-gttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    ||||||||||||| || |||| | || |||||||||||| | ||| |||||||||||||||| |||| | |  ||||||||||| | ||||||||||||     
T  37287732 aggaaaattctatggtgaagtaatgagaatgactttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactgtttgtacag 37287830  T
Q  247 tgacattaaaaattcagttctcata 271  Q
    || ||| |||| |||| | ||||||    
T  37287831 tggcatcaaaagttcaatcctcata 37287855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 47073707 - 47073656
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaac 198  Q
    |||||||||||||| ||||||||| || |||||||||||| || ||||||||    
T  47073707 aaggaaaattctatggtaaagtcatgataatgacttttttggtgaagttaac 47073656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 46884245 - 46884179
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaat 215  Q
    |||||||||||| || ||||||  |||||||||||||| |  ||||||||||  |||||||||||||    
T  46884245 ggaaaattctatagtgaagtcataaaaatgacttttttggcgaagttaacaccgtaacataaaaaat 46884179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 275
Target Start/End: Original strand, 23761089 - 23761197
Alignment:
Q  166 agtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagtt 265  Q
    ||||| || ||||||| || | || |||||||||||||||||| |||| | |  ||||||||||| | |||||||||| | |||||| |||| ||||||     
T  23761089 agtcatgagaatgactattcttgtaaagttaacactataacatcaaaagtgttgtgagtaacacctc-actgtttgtatagtgacatcaaaagttcagtc 23761187  T
Q  266 ctcatagtat 275  Q
    | ||||||||    
T  23761188 cccatagtat 23761197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 30002837 - 30002721
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||| ||||| || ||||||  ||||||| |||| | || ||||||||||| || ||| |||| | |  ||||||||||| | ||||||||||||     
T  30002837 aaggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctc-actgtttgtacag 30002739  T
Q  247 tgacattaaaaattcagt 264  Q
    |||||| |||| ||||||    
T  30002738 tgacatcaaaagttcagt 30002721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 53337624 - 53337559
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaa 214  Q
    |||||||||||| ||||||||| || ||||| |||| |  | |||||||||||| |||||||||||    
T  53337624 ggaaaattctatggtaaagtcatgataatgatttttctgataaagttaacactaaaacataaaaaa 53337559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 17272007 - 17272075
Alignment:
Q  145 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 213  Q
    |||||||||||||||| || |||||  |  |||||||||| | || |||||||||||||||||| ||||    
T  17272007 ataaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaa 17272075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 271
Target Start/End: Complemental strand, 34948306 - 34948187
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||| ||| || |||||| || |||||||||| | |  |||||||||||||||||| |||| | |  ||||||||||| | |||||||||| | || |    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccactgtttgtaaagtggc 34948208  T
Q  251 attaaaaattcagttctcata 271  Q
    || |||| |||||| ||||||    
T  34948207 atcaaaagttcagtcctcata 34948187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 279
Target Start/End: Original strand, 38011852 - 38011983
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || || ||| || |||||||||| | || |||| ||||||||||||| |||| | || ||| || |||| | |||||||||||      
T  38011852 aaggaaaattctatggtgaaatcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgaatagcacc-ccactgtttgtacgg 38011950  T
Q  247 tgacattaaaaattcagttctcatagtattatc 279  Q
    || ||| |||| |||||| | |||| |||||||    
T  38011951 tgccatcaaaagttcagtccccataatattatc 38011983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 3655388 - 3655262
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||| ||| || ||||||  ||||||||||||||  | ||||||||||||||||||||||||| |||||||||||||| | || |||||||||||    
T  3655388 aggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacacc-ccaccgtttgtacaat 3655290  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| |||||| ||||||||||    
T  3655289 gacatcaaaagttcagtcctcatagtat 3655262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 51213166 - 51213041
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| || |||||||||||| || ||||||||||| ||||||||||||| ||||||| |||||| | |||||||||||||||    
T  51213166 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacacc-ccactgtttgtacaatg 51213068  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
     ||| |||| || ||| ||||||||||    
T  51213067 gcatcaaaagttgagtcctcatagtat 51213041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 48354930 - 48355057
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||| || ||||| |||| | || ||||||||||||||| || |||||| |||||||||||||| | | |||||||||||    
T  48354930 aaggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacacc-ccattgtttgtacaa 48355028  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    || ||| |||| |||||||||||||||||    
T  48355029 tggcatcaaaagttcagttctcatagtat 48355057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 271
Target Start/End: Complemental strand, 40552445 - 40552323
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| || |||||||||||| |  |||||||||||||||||| |||||| |||||||||||| | | || |||||||||||    
T  40552445 aggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaaca-ctccaccgtttgtacaat 40552347  T
Q  248 gacattaaaaattcagttctcata 271  Q
    ||||| |||| |||||| ||||||    
T  40552346 gacatcaaaagttcagtcctcata 40552323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 248
Target Start/End: Complemental strand, 46297945 - 46297849
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||| || |||||| ||||||||||||| | || |||||||||||||||||| ||||||||| ||||||||| ||| |||||||||||||||    
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaaca-caccactgtttgtacaatg 46297849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 26941446 - 26941320
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || ||||||  | ||||| |||||| || ||||||||||||||| || |||| |||||||||||||||| | |||||||||| |||    
T  26941446 aggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacacc-ccactgtttgtataat 26941348  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| |||||| ||||| ||||    
T  26941347 gacatcaaaagttcagtcctcatggtat 26941320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 20373481 - 20373356
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||| ||| || ||||||  | ||||| |||||| || ||||||| |||||||||| |||||| ||| |||||||||| | |||||||||||||||    
T  20373481 ggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacacccc-actgtttgtacaatg 20373383  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||||||||| ||||    
T  20373382 acatcaaaagttcagttctcatggtat 20373356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 37203058 - 37203183
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || ||||||  ||||||| ||||||  | |||||||||||||||||| |||| | || ||||||||||| | |||||||||||| ||    
T  37203058 ggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacacc-ccactgtttgtacagtg 37203156  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
     ||| |||| |||||| ||||||||||    
T  37203157 gcatcaaaagttcagtcctcatagtat 37203183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 34132924 - 34133040
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    ||||||||||||||  | |||||| ||||||||||||||| || || |||||||||||  || |||||| |  ||||||||||| | |||||||||||||    
T  34132924 aaggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacacc-ccactgtttgtacaa 34133022  T
Q  247 tgacattaaaaattcagt 264  Q
    |||||| |||| ||||||    
T  34133023 tgacatcaaaagttcagt 34133040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 35844315 - 35844442
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||| || |||||||||| | || |||||||||||||||||  |||||| |  ||||||||||| | ||||||||||||     
T  35844315 aaggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctc-actgtttgtacag 35844413  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    |||||| |||| || ||| | ||||||||    
T  35844414 tgacatcaaaagtttagtccccatagtat 35844442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 4761838 - 4761709
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgactttttta--gttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 244  Q
    |||||||||||||| || || ||| || | ||||||||||   || ||||||| ||||||| || |||||| |||||||||||||  | |||||||||||    
T  4761838 aaggaaaattctatggtgaattcatgagattgacttttttttggtgaagttaatactataatatcaaaaatgtaatgagtaacacttc-actgtttgtac 4761740  T
Q  245 aatgacattaaaaattcagttctcatagtat 275  Q
    |||||||| |||| |||||| ||||||||||    
T  4761739 aatgacatcaaaagttcagtcctcatagtat 4761709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 47481546 - 47481638
Alignment:
Q  182 tttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 275  Q
    ||||| || |||||||||||||||||| |||||| |||||||||||||| | |||||||||| |||||||| |||| || ||  ||||||||||    
T  47481546 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccactgtttgtagaatgacatcaaaagtttagccctcatagtat 47481638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 42506214 - 42506135
Alignment:
Q  195 taacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 275  Q
    |||||||||||||| |||| | |||||||||| ||| | ||||||||||||||||||| |||| |||||| ||||||||||    
T  42506214 taacactataacatcaaaattgtaatgagtaatacccc-actgtttgtacaatgacatcaaaagttcagtcctcatagtat 42506135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 4015451 - 4015576
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| || |||||||||| |  | |||||||||||||| ||| |||| | |  ||||||||||| | |||||||||| | ||    
T  4015451 ggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacc-caactgtttgtagagtg 4015549  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||| ||||||||||    
T  4015550 acatcaaaagttcagtcctcatagtat 4015576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 275
Target Start/End: Complemental strand, 11357534 - 11357424
Alignment:
Q  165 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    |||||| || |||||||||| | || |||||||||||||| ||| |||| |||| ||||||||||| | |||||||||||| |  ||| |||| ||||||    
T  11357534 aagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagttcagt 11357435  T
Q  265 tctcatagtat 275  Q
      |||||||||    
T  11357434 catcatagtat 11357424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 37157699 - 37157823
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| ||||||| |||||||  | |||||||||||||||||| |||| | || ||||||||||| | |||| ||||||| ||    
T  37157699 ggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacacc-ccactg-ttgtacagtg 37157796  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
     ||| |||| ||||||  |||||||||    
T  37157797 gcatcaaaagttcagtcatcatagtat 37157823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 29099372 - 29099448
Alignment:
Q  175 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacat 252  Q
    |||||||||| | || ||||||||||||||||||||||||| |  ||||||||||| | |||||||||||| ||||||    
T  29099372 aatgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacacc-ccactgtttgtacagtgacat 29099448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 54505825 - 54505912
Alignment:
Q  175 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 263  Q
    ||||||||||||  | |||||||||||||||||| |||||| |||||||||||||| | | | ||| || |||||||| ||||||||||    
T  54505825 aatgacttttttgttgaagttaacactataacatcaaaaatgtaatgagtaacacc-ccattatttatagaatgacatcaaaaattcag 54505912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 230
Target Start/End: Complemental strand, 41585449 - 41585411
Alignment:
Q  192 agttaacactataacataaaaaatataatgagtaacacc 230  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  41585449 agttaacactataacatcaaaaatataatgagtaacacc 41585411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 55343471 - 55343401
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatat 217  Q
    |||||||||||||| || |||||| ||||||||||||| |  | ||||||||||||||| || ||||||||    
T  55343471 aaggaaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaacactataatatcaaaaatat 55343401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 7327669 - 7327542
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagtt-aacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    ||||||||||||| || |||| | || ||||||||||||||| ||||| ||||||||||||| |||| | |  ||||||||| | | | | ||||||||     
T  7327669 aggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaacactataacatcaaaagtgttgtgagtaaca-ctccattatttgtacag 7327571  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    |||||| |||| |||||| | ||||||||    
T  7327570 tgacatcaaaagttcagtccccatagtat 7327542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 21193593 - 21193649
Alignment:
Q  145 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacact 201  Q
    |||||||||||||||| ||||||||| || |||||||||| | || |||||||||||    
T  21193593 ataaggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacact 21193649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 54828888 - 54828805
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    |||| |||||| ||| || ||||||  ||||| | |||||| || ||||||||||||||||||| ||||| ||||||||||||||    
T  54828888 taagaaaaattttatggtgaagtcataaaaataatttttttggtaaagttaacactataacata-aaaatgtaatgagtaacacc 54828805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 22446247 - 22446168
Alignment:
Q  152 aaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacacc 230  Q
    ||||||||  || |||||| ||||||||||||||| | | ||||||||| |||| ||| ||||||||| |||||||||||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacattatatcatcaaaaatatagtgagtaacacc 22446168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 21009939 - 21009874
Alignment:
Q  197 acactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 263  Q
    |||||||||||| |||||| |||||||||||||| | ||| |||||| |||||||| |||| |||||    
T  21009939 acactataacatcaaaaatgtaatgagtaacacc-ccactatttgtagaatgacatcaaaagttcag 21009874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 27480564 - 27480439
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    ||||||||||||  | |||||| || |||||  ||||| || |||| ||||||||||||| |||| ||||||||||| || | | | |||||||||  ||    
T  27480564 ggaaaattctatgatgaagtcatgagaatgatatttttggtaaagtcaacactataacatcaaaagtataatgagtagcatc-caattgtttgtacggtg 27480466  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||| | ||||||||    
T  27480465 acatcaaaagttcagtccccatagtat 27480439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 39282640 - 39282764
Alignment:
Q  145 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 244  Q
    |||||||||||||||| || |||||| |||||||| |||| |  | || ||||||||||||||| |||| | |  ||||||| ||| | ||||||| |||    
T  39282640 ataaggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaacactataacatcaaaactgt-gtgagtaatacc-ccactgtttatac 39282737  T
Q  245 aatgacattaaaaattcagttctcata 271  Q
    | || ||| |||| |||||||||||||    
T  39282738 agtggcatcaaaagttcagttctcata 39282764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 49359676 - 49359628
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaa 197  Q
    |||||||||||| || |||||| ||||||||||||||| || |||||||    
T  49359676 ggaaaattctatggtgaagtcatgaaaatgactttttttgtgaagttaa 49359628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 5112490 - 5112363
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||| ||| || |||||| ||||||||||||||| || ||||||| |||||||||||||||||||| ||||||||||| | ||||||||||||     
T  5112490 aaggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacacc-ccactgtttgtacag 5112392  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    || ||| |||| |||||| | ||||||||    
T  5112391 tggcatcaaaagttcagtccccatagtat 5112363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 36860417 - 36860548
Alignment:
Q  143 acataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgt 242  Q
    |||||||||||||||||| || |||||| |||||||| |||| | || ||||||||||||||  ||||||||| |  ||||||||||| | |||||||||    
T  36860417 acataaggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacacc-ccactgtttgt 36860515  T
Q  243 acaatgacattaaaaattcagttctcatagtat 275  Q
    |||||||||| |||| |||||| | ||||||||    
T  36860516 acaatgacatcaaaagttcagtccccatagtat 36860548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 39572818 - 39572944
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| || |||||||||| |||||||||||| ||||||| ||||||||| |  ||||||||| | | ||||||||| || |    
T  39572818 aggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaaca-ctccactgtttgtgcagt 39572916  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| |||||||||||||||||    
T  39572917 gacatcaaaagttcagttctcatagtat 39572944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 264
Target Start/End: Complemental strand, 1429321 - 1429206
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||| ||||| || |||||| |||||||||| |||| || |||||||||||||| ||| ||||||||| ||||||||||| | |||||||||||| |    
T  1429321 aggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacacc-ccactgtttgtacact 1429223  T
Q  248 gacattaaaaattcagt 264  Q
    | ||| |||||||||||    
T  1429222 ggcatcaaaaattcagt 1429206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 35826660 - 35826533
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||| || |||||||||||| || ||||||| |||||||||| |||||| || ||||||||||  | | ||||||||||     
T  35826660 aaggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttc-attgtttgtacag 35826562  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    |||||| |||| |||||| ||||||||||    
T  35826561 tgacatcaaaagttcagtcctcatagtat 35826533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 24886100 - 24886229
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgactttttta--gttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 244  Q
    |||||||||| ||| || || ||| || ||||||||||||   || ||||||| |||||||||| |||||| |||||||||||||| | |||||||||||    
T  24886100 aaggaaaattttatggtgaaatcatgagaatgacttttttttggtgaagttaatactataacatcaaaaatgtaatgagtaacacc-ccactgtttgtac 24886198  T
Q  245 aatgacattaaaaattcagttctcatagtat 275  Q
    |||||||| |||| |||||| ||||||||||    
T  24886199 aatgacatcaaaagttcagtcctcatagtat 24886229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 31705785 - 31705679
Alignment:
Q  150 gaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 249  Q
    ||||||||||| || ||||||  ||||||| |||||| || |||||||||||||||||| |||||| ||| |||||||||| |||| |||||||||||||    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacc-ctaccgtttgtacaatga 31705687  T
Q  250 cattaaaa 257  Q
    ||| ||||    
T  31705686 catcaaaa 31705679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 245
Target Start/End: Original strand, 12910348 - 12910445
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    |||||||||||||| || |||||| ||||||||||||||| || ||||||| |||||||||| ||||||||| || |||||||| | ||||||||||||    
T  12910348 aaggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacacc-ccactgtttgtaca 12910445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 26317859 - 26317778
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    ||||||||||||  | |||||| ||||||||||||||| || |||||||||||||||||| |||||||||| ||||||||||    
T  26317859 ggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacacc 26317778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 271
Target Start/End: Complemental strand, 22974259 - 22974136
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||| | || ||||| |||||| || |||||||||||||||||| |||||  |||||||||||| | | |||||||||||||    
T  22974259 aaggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatc-ccactgtttgtacaa 22974161  T
Q  247 tgacattaaaaattcagttctcata 271  Q
    | |||| |||| |||| ||||||||    
T  22974160 taacatcaaaagttcaattctcata 22974136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 264
Target Start/End: Original strand, 36866762 - 36866876
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| |||||||| |||| | || ||||||||||||||| || ||||||||  ||||||||||| | |||||||||||||||    
T  36866762 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacacc-ccactgtttgtacaatg 36866860  T
Q  249 acattaaaaattcagt 264  Q
     ||| |||| ||||||    
T  36866861 gcatcaaaagttcagt 36866876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 275
Target Start/End: Complemental strand, 27318646 - 27318537
Alignment:
Q  165 aagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    |||||| || ||||| |||| | || |||||||||||| |||||||||||| || ||||||||| ||| ||||||||||||||||||| |||| || |||    
T  27318646 aagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaaca-caccactgtttgtacaatgacatcaaaagtttagt 27318548  T
Q  265 tctcatagtat 275  Q
    ||||| |||||    
T  27318547 tctcacagtat 27318537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 271
Target Start/End: Original strand, 22255179 - 22255303
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacat-aaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    |||||||| ||||  || ||||||  ||||| |||||||| || ||||||||| |||||||| ||||||| |||||||||||||| | || |||||||||    
T  22255179 aaggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaatgtaatgagtaacacccc-accgtttgtaca 22255277  T
Q  246 atgacattaaaaattcagttctcata 271  Q
    ||| ||| |||| |||||||||||||    
T  22255278 atggcatcaaaagttcagttctcata 22255303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 17158209 - 17158098
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagtt---aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 244  Q
    ||||||||||||| || ||||||  ||||||| ||||||  ||   ||||||||||||||||||||||||| |||||||||||| | | || ||||||||    
T  17158209 aggaaaattctatggtgaagtcataaaaatgatttttttttttgtgaagttaacactataacataaaaaatgtaatgagtaaca-ctccaccgtttgtac 17158111  T
Q  245 aatgacattaaaa 257  Q
    |||||||| ||||    
T  17158110 aatgacatcaaaa 17158098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 275
Target Start/End: Original strand, 5829921 - 5830026
Alignment:
Q  173 aaaatgacttttttagttaagttaacactataa----cataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctc 268  Q
    ||||||| |||||| || ||||||||| |||||    |||||||||| |||||||||||||| |||| |||||||||||||||| |||| || ||| |||    
T  5829921 aaaatgatttttttggtgaagttaacattataattaacataaaaaatgtaatgagtaacacc-ctaccgtttgtacaatgacatcaaaagtttagtcctc 5830019  T
Q  269 atagtat 275  Q
    |||||||    
T  5830020 atagtat 5830026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 8742064 - 8741947
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||| || |||||||||| | || |||||||||||||| ||| |||| | |  ||||||||||| | | |||||||||||    
T  8742064 aaggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtacaa 8741965  T
Q  247 tgacattaaaaattcagt 264  Q
    || ||| |||| ||||||    
T  8741964 tggcatcaaaagttcagt 8741947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 14919706 - 14919578
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    |||||||||| ||| || |||||| || ||| | |||||| | | ||||||||| |||||||| |||||| |||||||||||||| | ||||||| || |    
T  14919706 aaggaaaattatatggtgaagtcatgagaattattttttttgatgaagttaacattataacatcaaaaatgtaatgagtaacacctc-actgtttatata 14919608  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
    ||||||| |||| |||||| ||||||||||    
T  14919607 atgacatcaaaagttcagtcctcatagtat 14919578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 38528413 - 38528287
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||| |||||||  |||| |  | |||||||||||||||||| |||| | |||||||||||||| | | ||||| ||||     
T  38528413 aaggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacacc-ccattgtttatacag 38528315  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    |||||| |||| ||||| |||||||||||    
T  38528314 tgacatcaaaagttcag-tctcatagtat 38528287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 13956523 - 13956425
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    ||||||||||||||  || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || ||||||||||| | ||||||||||||    
T  13956523 taaggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctc-actgtttgtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 15724490 - 15724592
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||| | || |||||||||||| || |||||||||||||||||| |||| | |  ||||||||||| | ||||||| |||||||    
T  15724490 ggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacacc-ccactgtttatacaatg 15724588  T
Q  249 acat 252  Q
    ||||    
T  15724589 acat 15724592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 275
Target Start/End: Original strand, 27330303 - 27330429
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    ||||||||||||||| || |||||  |  |||||||||| | || |||||||||||||||||| |||| | |  |||||||||||  |||||||||||||    
T  27330303 taaggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaagtgt--tgagtaacacc-ttactgtttgtaca 27330399  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
    ||| ||| |||| ||||||  |||||||||    
T  27330400 atggcatcaaaagttcagtcttcatagtat 27330429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 264
Target Start/End: Original strand, 699192 - 699264
Alignment:
Q  191 aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    |||||||||||||| |||||||||| || ||||||||||| | |||||||||||| |||||| |||| ||||||    
T  699192 aagttaacactatagcataaaaaatctagtgagtaacacc-ccactgtttgtacagtgacatcaaaagttcagt 699264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 264
Target Start/End: Original strand, 40133385 - 40133499
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| ||||||||||||| | || ||||||||| ||||  || |||||| |  ||||||||||| | ||| |||||||||||    
T  40133385 ggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacacc-ccactatttgtacaatg 40133483  T
Q  249 acattaaaaattcagt 264  Q
     ||| |||| ||||||    
T  40133484 gcatcaaaagttcagt 40133499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 7209037 - 7208924
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagtt-aagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatga 249  Q
    |||||||||  || ||||||  |||||||||||||| | | ||||||||| | |||||||||||||  || |||||||||| |||| ||||||||| |||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatgcaacgagtaacacc-ctaccgtttgtacattga 7208939  T
Q  250 cattaaaaattcagt 264  Q
    ||| |||| ||||||    
T  7208938 catcaaaagttcagt 7208924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 7693230 - 7693355
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || ||||||  |||||||||||| | || |||||||||||||||||| |||| | |  ||||||||| | | |||||||||||| ||    
T  7693230 ggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatc-ccactgtttgtacagtg 7693328  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
     ||| |||| |||| | ||| ||||||    
T  7693329 gcatcaaaagttcaatcctcttagtat 7693355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 273
Target Start/End: Original strand, 19119857 - 19119982
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||| || |||||||||| | || |||||||||||||| ||| |||| | |    ||||||||| | ||||||||||||     
T  19119857 aaggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacacc-ccactgtttgtacag 19119955  T
Q  247 tgacattaaaaattcagttctcatagt 273  Q
    |||||| |||| |||||| | ||||||    
T  19119956 tgacatcaaaagttcagtccccatagt 19119982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 23116397 - 23116272
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || | |||| |||||||||||||||  | ||||||||| |||||||| |||| | || |||||| |||| | |||||||||||| ||    
T  23116397 ggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcacc-ccactgtttgtacagtg 23116299  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
      || |||| |||||||  ||||||||    
T  23116298 gaatcaaaagttcagtttacatagtat 23116272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 275
Target Start/End: Complemental strand, 30969502 - 30969374
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    ||||||||||||||   | |||||| || ||||| || | | || |||||||||||||||||| |||| | |  ||||||||||| | ||| ||| ||||    
T  30969502 taaggaaaattctacaatgaagtcatgagaatgatttatctggtgaagttaacactataacatcaaaagtgttgtgagtaacacccc-actatttataca 30969404  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
    ||||||| |||| |||||| ||||||||||    
T  30969403 atgacatcaaaagttcagtcctcatagtat 30969374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 9200232 - 9200358
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||| ||| || ||||||  ||||| |||||| | || |||||||||||||||||| |||| | |  ||||||||||| | || ||||||||| |    
T  9200232 aggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacc-ccacagtttgtacagt 9200330  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| || ||| ||| ||||||    
T  9200331 gacatcaaaagtttagtcctcttagtat 9200358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 16004552 - 16004485
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaat-gacttttttagttaagttaacactataacataaaaaat 215  Q
    |||||||||||| ||||||||| || ||| ||||||| | || |||||||||||||||||| ||||||    
T  16004552 ggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaat 16004485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 230
Target Start/End: Original strand, 22255617 - 22255656
Alignment:
Q  191 aagttaacactataacataaaaaatataatgagtaacacc 230  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  22255617 aagttaacactataacatcaaaaatgtaatgagtaacacc 22255656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 5748478 - 5748516
Alignment:
Q  192 agttaacactataacataaaaaatataatgagtaacacc 230  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  5748478 agttaacactataacgtcaaaaatataatgagtaacacc 5748516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 14409501 - 14409420
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    |||||||||||| || |||||| || ||||| |||| | || |||| ||||||||||||| |||||| || |||||| ||||    
T  14409501 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactataacatcaaaaatgtagtgagtagcacc 14409420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 275
Target Start/End: Original strand, 22980819 - 22980918
Alignment:
Q  175 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagta 274  Q
    |||||||||| | || ||||||||||||||  || ||||||| | ||||||| ||| | ||||||||  ||||||||| |||| |||||| | |||||||    
T  22980819 aatgacttttctggtgaagttaacactatagtatcaaaaatacagtgagtaatacc-ccactgtttgagcaatgacatcaaaagttcagtccccatagta 22980917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 275
Target Start/End: Complemental strand, 33551189 - 33551064
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||  || |||||| || ||||||||||||||| |||||||||||||||||| |||||| || ||||||||||| | |||||||||||||||    
T  33551189 ggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacacc-ccactgtttgtacaatg 33551091  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| ||| ||  |||||||||    
T  33551090 acatcaaaagttcggtcttcatagtat 33551064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 35958909 - 35959022
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    ||||||||||||  | ||||||  |||||||||||||| || |||||  |||||||||||||||||| ||||||| |||||| | |||||||||||||||    
T  35958909 ggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacacc-ccactgtttgtacaatg 35959007  T
Q  249 acattaaaaattcag 263  Q
    ||||||||| |||||    
T  35959008 acattaaaagttcag 35959022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 37905709 - 37905833
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||| |  ||||||| |||||| || ||||||||||||||||||||||||| ||| |||||||||| | || ||||||||||||    
T  37905709 ggaaaattctatggtgaagttataaaaatga-ttttttggtgaagttaacactataacataaaaaatgtaacgagtaacacc-ccaccgtttgtacaatg 37905806  T
Q  249 acattaaaaattcagttctcatagtat 275  Q
    |||| |||| |||||| ||||||||||    
T  37905807 acatcaaaagttcagtcctcatagtat 37905833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 19289523 - 19289401
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||||     ||||||||||||  | |||||||||||||||||| ||||||||||||||||||||| | | |||||||||||    
T  19289523 aaggaaaattctatggtgaagtc-----aatgacttttttgatgaagttaacactataacatcaaaaatataatgagtaacacc-ccattgtttgtacaa 19289430  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    |||||| |||| || |||||||| |||||    
T  19289429 tgacatcaaaagttaagttctcacagtat 19289401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 275
Target Start/End: Original strand, 4166918 - 4167047
Alignment:
Q  145 ataaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtac 244  Q
    |||||||||||||||| || |||||| ||||||||||||| | || ||||||||| ||||  || ||||||||  ||||||||||| | |||||||||||    
T  4166918 ataaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacacc-ccactgtttgtac 4167016  T
Q  245 aatgacattaaaaattcagttctcatagtat 275  Q
    |||| ||| |||| |||||| | ||||||||    
T  4167017 aatggcatcaaaagttcagtccccatagtat 4167047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 275
Target Start/End: Complemental strand, 29242344 - 29242216
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    ||||||||||||||| || |||||| |||||||  |||||| || ||||||| |||||||||||||||||||| || |||||||| | ||||||||||||    
T  29242344 taaggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacacc-ccactgtttgtaca 29242246  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
     ||  || |||| ||||||  |||||||||    
T  29242245 gtggtatcaaaagttcagtcttcatagtat 29242216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 151 - 275
Target Start/End: Complemental strand, 33660569 - 33660446
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || ||||||  |||||||||||| ||||||||||||||||||||||| |||| | |  ||||||||||| | |||||||||||| || |    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaagtgttgtgagtaacacc-caactgtttgtacagtggc 33660471  T
Q  251 attaaaaattcagttctcatagtat 275  Q
    || |||| |||||| ||| ||||||    
T  33660470 atcaaaagttcagtcctcttagtat 33660446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 43648415 - 43648323
Alignment:
Q  182 tttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 275  Q
    ||||| || |||||||||||||||||| |||||| |||||||||||||| | |||||||||| |||||||| |||| ||||||  |||||||||    
T  43648415 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacctc-actgtttgtataatgacatcaaaagttcagtcatcatagtat 43648323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 11366585 - 11366459
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || || |||  | |||||||||||| || || ||||||||||||||| |||||| |||||||||||| | | ||| |||||| |||    
T  11366585 aggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctc-actatttgtataat 11366487  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| |||||  ||||||||||    
T  11366486 gacatcaaaagttcagccctcatagtat 11366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 26357577 - 26357699
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||| ||| || |||||| ||||||||||||| |  | |||||||||||||||||| |||| | || ||||||||| | | |||||||||||| ||    
T  26357577 ggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatc-ccactgtttgtacagtg 26357675  T
Q  249 acattaaaaattcagttctcatag 272  Q
    |||| |||| ||||||||| ||||    
T  26357676 acatcaaaagttcagttcttatag 26357699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 275
Target Start/End: Original strand, 3176941 - 3177064
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || |||| | ||||||||||||| |  | ||||||| ||||||| || |||||| |  ||||||||||  | |||||||||||||||||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacg-caactgtttgtacaatgac 3177039  T
Q  251 attaaaaattcagttctcatagtat 275  Q
    || |||| |||||| ||||||||||    
T  3177040 atcaaaagttcagtcctcatagtat 3177064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 17054300 - 17054192
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| |  |||||||||||| || ||||||| |||||||||| |||||| || | ||||||| | | | ||||||||||||    
T  17054300 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctc-attgtttgtacaat 17054202  T
Q  248 gacattaaaa 257  Q
    ||||| ||||    
T  17054201 gacatcaaaa 17054192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 2325575 - 2325448
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||||||| || |||| | |  |||||||||| | || ||||||||| |||||||| | |||| || ||||||||||| | | ||||||||||     
T  2325575 aaggaaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaatataacatcataaatgtattgagtaacacc-ccattgtttgtacac 2325477  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    || ||| |||| |||||| ||||||||||    
T  2325476 tggcatcaaaagttcagtcctcatagtat 2325448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 39167568 - 39167441
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaa 246  Q
    |||||||||| ||| || |||||| || ||||| ||||||  | |||||||||  |||  || |||| |||  ||||||||||| | |||||||||||||    
T  39167568 aaggaaaattttatggtgaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctc-actgtttgtacaa 39167470  T
Q  247 tgacattaaaaattcagttctcatagtat 275  Q
    |||||| |||| |||||| ||||||||||    
T  39167469 tgacatcaaaagttcagtcctcatagtat 39167441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 279
Target Start/End: Complemental strand, 4264281 - 4264151
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || ||||||  | |||||||||| | || |||||||||||||| ||| |||| | |  ||||||||| | | |||||||||||| |    
T  4264281 aggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatc-ccactgtttgtacagt 4264183  T
Q  248 gacattaaaaattcagttctcatagtattatc 279  Q
    ||||| |||| ||||||   ||||||||||||    
T  4264182 gacatcaaaagttcagtctccatagtattatc 4264151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 17071941 - 17071815
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| |  |||||||||||| || |||||||||||||||||  |||||| || | ||||||| | | | | ||||||||||    
T  17071941 aggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctc-attatttgtacaat 17071843  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    ||||| |||| ||| ||  |||||||||    
T  17071842 gacatcaaaagttcggtattcatagtat 17071815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 27350109 - 27350027
Alignment:
Q  181 ttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagt 264  Q
    |||||| || |||||||||||||| ||| |||||| |  ||||||||||||| |||||||||||| |||||| |||| ||||||    
T  27350109 ttttttggtgaagttaacactatagcatcaaaaatgttgtgagtaacaccac-actgtttgtacagtgacatcaaaagttcagt 27350027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 275
Target Start/End: Original strand, 33902094 - 33902191
Alignment:
Q  175 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagta 274  Q
    |||||||||| | || ||||||||||  ||||||||||||| || ||||||| ||| | |||||||||| |||||||| |||| |||||| |||| ||||    
T  33902094 aatgacttttctggtgaagttaacac--taacataaaaaatgtagtgagtaatacc-ccactgtttgtaaaatgacatcaaaagttcagtcctcaaagta 33902190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 275
Target Start/End: Original strand, 36641983 - 36642111
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtaca 245  Q
    |||| |||||||||| || |||||| || |||||||||| | || || |||| |||||| ||| |||| | |   |||||||||| | ||||||||||||    
T  36641983 taagaaaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctc-actgtttgtaca 36642081  T
Q  246 atgacattaaaaattcagttctcatagtat 275  Q
     |||||| |||| |||||| ||||||||||    
T  36642082 gtgacatcaaaagttcagtcctcatagtat 36642111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 18494473 - 18494390
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacacc 230  Q
    |||||||||||| | || |||||| ||||||||||||| | || |||||||||||||| ||| |||| | |  |||||||||||    
T  18494473 aaggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacc 18494390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 34441972 - 34441921
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaa 197  Q
    ||||||||||||||| || |||||| ||||||||||||||| || |||||||    
T  34441972 taaggaaaattctatggtgaagtcatgaaaatgacttttttggtaaagttaa 34441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 41960880 - 41960947
Alignment:
Q  146 taaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaa 213  Q
    ||||||||||||||| || ||||||   |||||||||||||  | |||||||||||||||||| ||||    
T  41960880 taaggaaaattctatggtgaagtcatagaaatgacttttttgatgaagttaacactataacatcaaaa 41960947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 44913662 - 44913774
Alignment:
Q  149 ggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatg 248  Q
    |||||||||||| || |||||| ||||||||||||| | || ||||||||||| ||  || |||||| |  ||||||||||| |   |||||||| ||||    
T  44913662 ggaaaattctatggtgaagtcacgaaaatgacttttat-gtgaagttaacactgtagtatcaaaaatgttgtgagtaacacctcacttgtttgtaaaatg 44913760  T
Q  249 acattaaaaattca 262  Q
    |||| |||| ||||    
T  44913761 acataaaaagttca 44913774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 275
Target Start/End: Complemental strand, 41464051 - 41463928
Alignment:
Q  151 aaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgac 250  Q
    |||||||||| || |||||  || |||||| ||||| || ||||||| ||||||| || |||| | |  ||||||||||| | |||||||||||| || |    
T  41464051 aaaattctatggtgaagtcgtgagaatgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctc-actgtttgtacagtggc 41463953  T
Q  251 attaaaaattcagttctcatagtat 275  Q
    || |||| |||| | ||||||||||    
T  41463952 atcaaaagttcaatcctcatagtat 41463928  T

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Target: scaffold0291 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 275
Target Start/End: Original strand, 7913 - 8012
Alignment:
Q  175 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagta 274  Q
    ||||||||||||  | |||||||||||||||||| |||| | |||||||||||||| | ||||||||||||||||||| |||| |||||| |||||||||    
T  7913 aatgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacacc-ccactgtttgtacaatgacatcaaaagttcagtcctcatagta 8011  T

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Target: scaffold0002 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 133 - 259
Alignment:
Q  148 aggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaat 247  Q
    ||||||||||||| || |||||| ||||||||||||| | || ||||||||||| ||  ||||||||| |  ||||||||| | | ||||||||||||||    
T  133 aggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaaca-ctccactgtttgtacaat 231  T
Q  248 gacattaaaaattcagttctcatagtat 275  Q
    | ||| |||| |||||| ||||||||||    
T  232 ggcatcaaaagttcagtcctcatagtat 259  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 146175 - 146088
Alignment:
Q  175 aatgacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcag 263  Q
    ||||| |||||| |||||||||||| ||||||||||||||| |||||||||||||| | | | |||||| |||||||| |||| |||||    
T  146175 aatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacacc-ccattatttgtagaatgacatcaaaagttcag 146088  T

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Target: scaffold0061 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 43986 - 44082
Alignment:
Q  178 gacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 275  Q
    ||||||||| || |||||||| |||||| || |||||| |||||||||||||| |   ||||||||||||| ||| |||| |||||| ||||||||||    
T  43986 gacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacacc-ccgttgtttgtacaatggcataaaaagttcagtcctcatagtat 44082  T

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Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 154801 - 154705
Alignment:
Q  178 gacttttttagttaagttaacactataacataaaaaatataatgagtaacaccactactgtttgtacaatgacattaaaaattcagttctcatagtat 275  Q
    ||||||||| || |||||||| |||||| || |||||| |||||||||||||| |   ||||||||||||| ||| |||| |||||| ||||||||||    
T  154801 gacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacacc-ccgttgtttgtacaatggcataaaaagttcagtcctcatagtat 154705  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 100819 - 100886
Alignment:
Q  147 aaggaaaattctatcgtaaagtcaggaaaatgacttttttagttaagttaacactataacataaaaaa 214  Q
    |||||||||||||| || |||||| || ||||| |||||| || |||||||| ||||||||| |||||    
T  100819 aaggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacgctataacatcaaaaa 100886  T

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