View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9325_low_6 (Length: 369)

Name: NF9325_low_6
Description: NF9325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9325_low_6
NF9325_low_6
[»] chr7 (33 HSPs)
chr7 (75-353)||(11738151-11738432)
chr7 (194-353)||(11744779-11744938)
chr7 (75-167)||(15680836-15680928)
chr7 (76-165)||(20549820-20549909)
chr7 (76-167)||(32287404-32287495)
chr7 (75-167)||(21880179-21880271)
chr7 (75-157)||(598245-598327)
chr7 (75-140)||(5409771-5409836)
chr7 (76-169)||(22484050-22484143)
chr7 (74-138)||(17852056-17852120)
chr7 (75-147)||(24339700-24339772)
chr7 (75-167)||(33994239-33994331)
chr7 (75-166)||(21864836-21864927)
chr7 (74-146)||(7133211-7133284)
chr7 (75-110)||(29763129-29763164)
chr7 (75-110)||(35862035-35862070)
chr7 (74-140)||(2334314-2334380)
chr7 (121-167)||(5835274-5835320)
chr7 (77-147)||(26033392-26033462)
chr7 (75-109)||(30813882-30813916)
chr7 (75-129)||(43027404-43027458)
chr7 (90-147)||(6028683-6028740)
chr7 (69-110)||(6490800-6490841)
chr7 (98-167)||(8234173-8234242)
chr7 (75-128)||(9778571-9778624)
chr7 (75-116)||(41229237-41229278)
chr7 (75-115)||(3991392-3991432)
chr7 (76-160)||(10359633-10359717)
chr7 (82-110)||(18215144-18215172)
chr7 (74-106)||(19213881-19213913)
chr7 (135-167)||(22602710-22602742)
chr7 (77-109)||(28943351-28943383)
chr7 (74-110)||(32093953-32093989)
[»] chr8 (36 HSPs)
chr8 (20-110)||(17751740-17751830)
chr8 (20-110)||(17760727-17760817)
chr8 (77-167)||(3025578-3025668)
chr8 (78-167)||(40332218-40332307)
chr8 (75-167)||(18407746-18407838)
chr8 (20-75)||(17737641-17737696)
chr8 (77-162)||(926730-926815)
chr8 (75-167)||(4298830-4298918)
chr8 (75-164)||(36450694-36450783)
chr8 (79-159)||(5813627-5813707)
chr8 (75-147)||(21465470-21465542)
chr8 (75-147)||(22652034-22652106)
chr8 (75-146)||(29510233-29510304)
chr8 (72-147)||(34450958-34451033)
chr8 (73-167)||(4786276-4786370)
chr8 (75-140)||(22197671-22197736)
chr8 (75-167)||(14134726-14134818)
chr8 (23-71)||(15734182-15734230)
chr8 (75-167)||(24413499-24413591)
chr8 (80-164)||(31109463-31109547)
chr8 (76-160)||(43737752-43737836)
chr8 (75-110)||(26902104-26902139)
chr8 (75-110)||(31514938-31514973)
chr8 (83-157)||(126295-126369)
chr8 (77-167)||(20679337-20679427)
chr8 (75-160)||(3951476-3951561)
chr8 (74-155)||(4498342-4498423)
chr8 (75-112)||(11927015-11927052)
chr8 (77-166)||(15023199-15023288)
chr8 (135-167)||(8847283-8847315)
chr8 (135-167)||(11927086-11927118)
chr8 (75-147)||(15816058-15816130)
chr8 (135-167)||(26902175-26902207)
chr8 (75-147)||(29447502-29447574)
chr8 (79-167)||(31580071-31580159)
chr8 (75-167)||(33405324-33405416)
[»] chr1 (47 HSPs)
chr1 (75-164)||(37598861-37598950)
chr1 (74-167)||(22515826-22515919)
chr1 (75-167)||(18337356-18337448)
chr1 (74-166)||(46348322-46348414)
chr1 (75-167)||(1815284-1815376)
chr1 (75-167)||(5898206-5898298)
chr1 (75-167)||(51410052-51410144)
chr1 (77-164)||(42359391-42359478)
chr1 (75-167)||(38078601-38078693)
chr1 (77-167)||(1486646-1486741)
chr1 (76-167)||(40258874-40258965)
chr1 (72-110)||(2218312-2218350)
chr1 (98-167)||(7353455-7353525)
chr1 (89-167)||(40181898-40181976)
chr1 (75-147)||(6427522-6427594)
chr1 (74-110)||(16812640-16812676)
chr1 (75-147)||(31694639-31694711)
chr1 (75-147)||(40917807-40917879)
chr1 (75-146)||(32461393-32461464)
chr1 (76-166)||(5927281-5927371)
chr1 (75-117)||(21365992-21366034)
chr1 (74-147)||(47989555-47989628)
chr1 (75-147)||(9828102-9828174)
chr1 (75-167)||(34712323-34712415)
chr1 (74-110)||(35702541-35702577)
chr1 (75-110)||(17705546-17705581)
chr1 (74-117)||(18556384-18556427)
chr1 (78-117)||(21038163-21038202)
chr1 (75-110)||(22947814-22947849)
chr1 (80-167)||(26830615-26830701)
chr1 (75-110)||(30359449-30359484)
chr1 (79-166)||(39130711-39130798)
chr1 (75-117)||(15765835-15765877)
chr1 (73-167)||(18190046-18190140)
chr1 (97-167)||(28674827-28674897)
chr1 (77-167)||(29163323-29163413)
chr1 (133-167)||(30749867-30749901)
chr1 (133-167)||(30771318-30771352)
chr1 (77-110)||(16297223-16297256)
chr1 (133-166)||(52903277-52903310)
chr1 (135-167)||(5944310-5944342)
chr1 (74-110)||(9630560-9630596)
chr1 (76-160)||(10577676-10577760)
chr1 (133-169)||(24334703-24334739)
chr1 (75-147)||(25934674-25934746)
chr1 (135-167)||(34371740-34371772)
chr1 (135-167)||(44482257-44482289)
[»] chr3 (33 HSPs)
chr3 (75-167)||(55401102-55401194)
chr3 (75-167)||(40993275-40993367)
chr3 (74-167)||(35222965-35223058)
chr3 (75-167)||(10954979-10955074)
chr3 (75-167)||(18426976-18427068)
chr3 (75-167)||(20503492-20503584)
chr3 (76-167)||(8789489-8789582)
chr3 (75-160)||(13845465-13845550)
chr3 (77-167)||(28918028-28918120)
chr3 (75-167)||(8842356-8842448)
chr3 (75-147)||(41961579-41961651)
chr3 (77-148)||(4987222-4987293)
chr3 (75-110)||(11610593-11610628)
chr3 (76-167)||(32804485-32804572)
chr3 (82-167)||(3631711-3631796)
chr3 (79-164)||(25093532-25093617)
chr3 (75-167)||(27505273-27505370)
chr3 (74-139)||(34185051-34185116)
chr3 (76-140)||(14216957-14217021)
chr3 (76-140)||(14223086-14223150)
chr3 (75-147)||(16789070-16789141)
chr3 (75-110)||(4990912-4990947)
chr3 (75-166)||(7171529-7171620)
chr3 (77-167)||(24204983-24205073)
chr3 (75-125)||(2408590-2408640)
chr3 (133-167)||(7928477-7928511)
chr3 (98-167)||(34307738-34307812)
chr3 (133-166)||(8383285-8383318)
chr3 (78-111)||(15544767-15544800)
chr3 (73-166)||(23657767-23657860)
chr3 (75-164)||(26492145-26492234)
chr3 (74-166)||(4466539-4466631)
chr3 (71-147)||(8039760-8039836)
[»] chr4 (41 HSPs)
chr4 (73-167)||(23292924-23293018)
chr4 (75-168)||(16073420-16073513)
chr4 (75-159)||(34306744-34306828)
chr4 (74-167)||(28964187-28964280)
chr4 (75-167)||(2361915-2362007)
chr4 (75-167)||(49431053-49431145)
chr4 (73-167)||(8423656-8423750)
chr4 (76-129)||(14465006-14465059)
chr4 (87-167)||(21945530-21945610)
chr4 (74-167)||(35157924-35158017)
chr4 (75-167)||(12895214-12895306)
chr4 (78-130)||(28084588-28084640)
chr4 (75-167)||(715545-715639)
chr4 (75-167)||(752871-752965)
chr4 (75-114)||(3064868-3064907)
chr4 (75-110)||(11596297-11596332)
chr4 (75-110)||(18513175-18513210)
chr4 (75-167)||(24343534-24343632)
chr4 (121-167)||(54580009-54580055)
chr4 (98-167)||(40179599-40179668)
chr4 (76-129)||(44081508-44081561)
chr4 (75-167)||(4672025-4672117)
chr4 (75-147)||(19482726-19482798)
chr4 (76-164)||(20950368-20950456)
chr4 (75-167)||(35161063-35161155)
chr4 (75-110)||(5775304-5775339)
chr4 (76-147)||(30982808-30982879)
chr4 (76-111)||(40965354-40965389)
chr4 (75-164)||(53381530-53381625)
chr4 (77-167)||(4157176-4157266)
chr4 (77-167)||(4157463-4157553)
chr4 (76-110)||(4383450-4383484)
chr4 (75-117)||(29205545-29205587)
chr4 (76-168)||(3947702-3947799)
chr4 (76-117)||(5922532-5922573)
chr4 (77-110)||(22440559-22440592)
chr4 (74-110)||(2054127-2054163)
chr4 (75-107)||(18966596-18966628)
chr4 (74-110)||(23386242-23386278)
chr4 (77-117)||(28000672-28000712)
chr4 (75-107)||(42015047-42015079)
[»] scaffold0053 (1 HSPs)
scaffold0053 (75-159)||(8833-8917)
[»] chr5 (29 HSPs)
chr5 (75-167)||(21576685-21576777)
chr5 (77-167)||(21190998-21191088)
chr5 (75-167)||(43564908-43565000)
chr5 (74-147)||(39698599-39698672)
chr5 (77-165)||(30502330-30502418)
chr5 (77-165)||(30542673-30542761)
chr5 (74-168)||(30098977-30099071)
chr5 (75-147)||(32766872-32766944)
chr5 (78-146)||(39268541-39268609)
chr5 (75-167)||(42893387-42893479)
chr5 (75-128)||(14873588-14873641)
chr5 (75-140)||(31084382-31084447)
chr5 (74-110)||(17123131-17123167)
chr5 (75-167)||(28588614-28588706)
chr5 (74-110)||(35017127-35017163)
chr5 (75-167)||(42029779-42029871)
chr5 (75-110)||(10298634-10298669)
chr5 (75-110)||(19820328-19820363)
chr5 (75-110)||(22423764-22423799)
chr5 (75-117)||(40000493-40000535)
chr5 (74-166)||(16304365-16304455)
chr5 (77-110)||(43001889-43001922)
chr5 (75-111)||(2436994-2437030)
chr5 (79-115)||(4105338-4105374)
chr5 (75-143)||(11686000-11686068)
chr5 (75-163)||(21194063-21194151)
chr5 (75-147)||(21522808-21522880)
chr5 (75-147)||(21533374-21533446)
chr5 (74-110)||(24906251-24906287)
[»] chr6 (37 HSPs)
chr6 (76-167)||(17841530-17841621)
chr6 (74-167)||(28152125-28152218)
chr6 (75-167)||(28715322-28715414)
chr6 (75-167)||(34595161-34595253)
chr6 (75-147)||(10339054-10339126)
chr6 (74-167)||(13360312-13360404)
chr6 (75-167)||(4877970-4878061)
chr6 (75-167)||(7378006-7378098)
chr6 (75-147)||(8365448-8365520)
chr6 (98-168)||(29020938-29021008)
chr6 (78-167)||(32978842-32978931)
chr6 (75-167)||(6898221-6898313)
chr6 (75-110)||(426478-426513)
chr6 (75-129)||(8776908-8776962)
chr6 (75-145)||(17435259-17435329)
chr6 (74-167)||(32511605-32511698)
chr6 (75-140)||(17327590-17327655)
chr6 (74-167)||(24645508-24645601)
chr6 (77-109)||(5569834-5569866)
chr6 (75-147)||(16766755-16766827)
chr6 (74-117)||(9629471-9629514)
chr6 (75-110)||(10770607-10770642)
chr6 (133-167)||(7265591-7265625)
chr6 (75-109)||(7723199-7723233)
chr6 (75-117)||(7938177-7938219)
chr6 (75-117)||(33818045-33818087)
chr6 (75-112)||(10842615-10842652)
chr6 (98-167)||(19040379-19040448)
chr6 (133-166)||(21924933-21924966)
chr6 (73-162)||(23771610-23771699)
chr6 (75-104)||(28919488-28919517)
chr6 (76-129)||(31384995-31385048)
chr6 (135-167)||(7027269-7027301)
chr6 (135-167)||(9025494-9025526)
chr6 (76-167)||(9658906-9658998)
chr6 (74-110)||(9997793-9997829)
chr6 (75-167)||(33001229-33001321)
[»] chr2 (40 HSPs)
chr2 (76-167)||(28596496-28596587)
chr2 (77-167)||(2438661-2438751)
chr2 (75-147)||(35056926-35056998)
chr2 (75-167)||(37559004-37559096)
chr2 (75-145)||(26769571-26769641)
chr2 (74-167)||(18840952-18841045)
chr2 (75-147)||(30717459-30717531)
chr2 (69-117)||(44635570-44635618)
chr2 (75-145)||(27084318-27084388)
chr2 (75-164)||(15972903-15972992)
chr2 (74-167)||(38117098-38117191)
chr2 (75-167)||(20242667-20242759)
chr2 (75-167)||(34993922-34994014)
chr2 (75-147)||(37419801-37419873)
chr2 (75-110)||(11223793-11223828)
chr2 (75-115)||(6180790-6180830)
chr2 (75-147)||(32749754-32749826)
chr2 (79-167)||(37411188-37411276)
chr2 (88-167)||(12224250-12224329)
chr2 (75-167)||(18622633-18622721)
chr2 (74-129)||(21782743-21782798)
chr2 (75-146)||(24009343-24009414)
chr2 (75-110)||(39323322-39323357)
chr2 (133-167)||(5367219-5367253)
chr2 (76-117)||(3444827-3444868)
chr2 (75-112)||(20539632-20539669)
chr2 (98-167)||(29176456-29176525)
chr2 (69-110)||(34691763-34691804)
chr2 (133-166)||(34691803-34691836)
chr2 (69-110)||(34714175-34714216)
chr2 (133-166)||(34714215-34714248)
chr2 (75-128)||(42511322-42511375)
chr2 (135-168)||(44860346-44860379)
chr2 (83-167)||(5040761-5040845)
chr2 (135-167)||(12668423-12668455)
chr2 (74-110)||(15907850-15907886)
chr2 (75-139)||(18420363-18420427)
chr2 (75-103)||(24975255-24975283)
chr2 (75-167)||(30404790-30404882)
chr2 (135-167)||(36756344-36756376)
[»] scaffold0475 (1 HSPs)
scaffold0475 (75-164)||(3338-3427)
[»] scaffold0652 (1 HSPs)
scaffold0652 (76-164)||(403-491)
[»] scaffold0512 (1 HSPs)
scaffold0512 (75-157)||(4976-5058)
[»] scaffold0050 (1 HSPs)
scaffold0050 (78-167)||(70305-70394)
[»] scaffold0361 (1 HSPs)
scaffold0361 (75-167)||(14557-14646)
[»] scaffold0003 (1 HSPs)
scaffold0003 (75-147)||(241652-241724)
[»] scaffold0793 (1 HSPs)
scaffold0793 (75-167)||(4821-4915)
[»] scaffold0008 (1 HSPs)
scaffold0008 (77-147)||(263303-263373)
[»] scaffold0450 (1 HSPs)
scaffold0450 (75-147)||(8564-8636)
[»] scaffold0136 (1 HSPs)
scaffold0136 (75-147)||(3778-3850)
[»] scaffold0086 (1 HSPs)
scaffold0086 (75-147)||(2986-3058)
[»] scaffold0083 (1 HSPs)
scaffold0083 (75-167)||(45470-45562)
[»] scaffold0027 (1 HSPs)
scaffold0027 (74-110)||(46741-46777)
[»] scaffold0019 (1 HSPs)
scaffold0019 (75-147)||(71783-71855)
[»] scaffold0380 (1 HSPs)
scaffold0380 (75-129)||(8666-8720)
[»] scaffold0057 (1 HSPs)
scaffold0057 (75-147)||(24082-24155)
[»] scaffold0021 (1 HSPs)
scaffold0021 (75-117)||(2978-3020)
[»] scaffold0004 (1 HSPs)
scaffold0004 (76-110)||(92906-92940)
[»] scaffold0171 (1 HSPs)
scaffold0171 (135-167)||(23447-23479)
[»] scaffold0168 (1 HSPs)
scaffold0168 (75-111)||(21242-21278)
[»] scaffold0020 (1 HSPs)
scaffold0020 (74-110)||(135262-135298)


Alignment Details
Target: chr7 (Bit Score: 184; Significance: 2e-99; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 75 - 353
Target Start/End: Original strand, 11738151 - 11738432
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatgcacacnn 174  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |       
T  11738151 ctatgaaacacggacactcctctgattaggcgtgtctcagtgtggaacacgtctcatttccgacagcgacacgtataattacactgaattatgcaaaaaa 11738250  T
Q  175 nnnnnn---ttattaaccccttaattatgaattgttgaattgaattgtaggatttgtggacccatctggaatatgttgtgggtatcatgaagatggatac 271  Q
             ||||||||||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||    
T  11738251 aaaaatatattattaaccccttaactatgaattgttgaattgaattgtaggatttgttgatccttctggaatatgttgtgggtatcatgaaaatggatac 11738350  T
Q  272 catgtttattgtggaaataaagcaacgattaatggtaaagaaatagttgctagttcttgtgaagatccttcaaagtacatta 353  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  11738351 catgtttattgtgggaataaagcaacgattaatggtaaagaaattgttacaagttcttgtgaagatccttcaaagtacatta 11738432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 194 - 353
Target Start/End: Original strand, 11744779 - 11744938
Alignment:
Q  194 aattatgaattgttgaattgaattgtaggatttgtggacccatctggaatatgttgtgggtatcatgaagatggataccatgtttattgtggaaataaag 293  Q
    |||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11744779 aattatgaattgttgaattgaattgtaggatttgttaacccttctggaatatgttgtgggtatcatgaagatggataccatgtttattgtggaaataaag 11744878  T
Q  294 caacgattaatggtaaagaaatagttgctagttcttgtgaagatccttcaaagtacatta 353  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11744879 caatgattaatggtaaagaaatagttgctagttcttgtgaagatccttcaaagtacatta 11744938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 15680928 - 15680836
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||||  ||||| |||||||| |||| | ||||||||| | |||||||||||||| |||||||||||| |||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatg 15680836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 20549909 - 20549820
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatta 165  Q
    |||||||||||| |||||||| |||||||||||||||| ||| | ||| ||||  | |||||||||||||| ||||||||||||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaatta 20549820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 32287404 - 32287495
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||| ||||||| ||||| | |||| | |||| |||||| |||||||||||||| |||| || ||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatg 32287495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 21880271 - 21880179
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||| ||| |||||||||||||   |||| | ||| ||||| | |||||||||||||| | ||||||||||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 21880179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 598327 - 598245
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattaca 157  Q
    |||||||||||||||||| ||| ||||||||||||| | |||| | ||||||||| | || ||||||||||| || |||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattaca 598245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 5409771 - 5409836
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacac 140  Q
    |||||||||||||||||||||| ||||||||||||| | |||| | ||||||||| | ||||||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 169
Target Start/End: Complemental strand, 22484143 - 22484050
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatgca 169  Q
    ||||||||||||||||| ||| ||| || | ||||||  ||| | ||| ||||||| || ||||||||||| |||||||| |||||||||||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgacacatataattatactgaattatgca 22484050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 17852120 - 17852056
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgac 138  Q
    |||||||||||||||||||||||  |||||| ||||||| |||| | ||||||||||| ||||||    
T  17852120 actatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtccgac 17852056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 24339772 - 24339700
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||| |||||||| ||||||||||||| | |||| | | ||||||| | |||||||||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacg 24339700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 33994331 - 33994239
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||| |||| ||||||||  ||||||||||||||| |||| | ||| ||||| | || ||||||||||| | ||||| ||||||||||||    
T  33994331 ctatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatg 33994239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 21864927 - 21864836
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattat 166  Q
    ||||||||||| ||||||||||  ||||| |||||| | |||| | ||||||||| | ||||||| |||||| | |||||||||| ||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattat 21864836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 7133211 - 7133284
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtc-atttccgacaccgacac 146  Q
    |||||||||||||||| |||||||||||||| ||||| |||||| | ||||| |||  | ||||||||||||||    
T  7133211 actatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacac 7133284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 29763129 - 29763164
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtc 29763164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 35862070 - 35862035
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtc 35862035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 2334380 - 2334314
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacac 140  Q
    |||||||| |||||||||||||| |||||| ||||| ||||||| | ||| ||||| | ||||||||    
T  2334380 actatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 5835320 - 5835274
Alignment:
Q  121 acacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||| |||||| || ||||||||||| ||||||||||||||||||||    
T  5835320 acacatgtcatgtctgacaccgacacatataattacactgaattatg 5835274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 26033392 - 26033462
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||| |||||||||||||| ||||||| ||||| | || | | ||||||||||| || ||||||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacg 26033462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Complemental strand, 30813916 - 30813882
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgt 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  30813916 ctatgaagcacggacactcctcggattaggcgtgt 30813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 43027404 - 43027458
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtc 129  Q
    ||||||||||||||||||| || ||||||||||||| | |||| | |||||||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtc 43027458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 6028740 - 6028683
Alignment:
Q  90 actcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||| ||||||||||||||||||||||| |||| |||||| | | |||||| ||||||    
T  6028740 actcttcagattaggcgtgtctcagtgtcgaactcgtgtcgtgttcgacactgacacg 6028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 6490841 - 6490800
Alignment:
Q  69 cacacactatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||| ||||||||||||||||||||||| ||||| |||||||    
T  6490841 cacaaactatgaagcacggacactcctcggattaagcgtgtc 6490800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 8234242 - 8234173
Alignment:
Q  98 gattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||| |||| | ||| ||||| | |||||||||| ||| | ||| ||||||||||||||    
T  8234242 gattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatg 8234173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 9778624 - 9778571
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgt 128  Q
    |||||||||||||||||||||  ||||||||||||| | |||| | ||||||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgt 9778571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 41229237 - 41229278
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtg 116  Q
    |||||||||||||||||| |||| |||||||||||| |||||    
T  41229237 ctatgaagcacggacacttctcatattaggcgtgtcgcagtg 41229278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 3991432 - 3991392
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagt 115  Q
    ||||||||| |||||||||||| ||||||||||||| ||||    
T  3991432 ctatgaagcccggacactcctcggattaggcgtgtcccagt 3991392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 10359717 - 10359633
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactg 160  Q
    ||||||||||||||||   || |||||| |||||||| |||| | ||||  ||| | ||||||| |||||| |||||||||||||    
T  10359717 tatgaagcacggacacctttcggattagacgtgtctcggtgtcggacacaagtcgtatccgacatcgacacctataattacactg 10359633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 18215144 - 18215172
Alignment:
Q  82 gcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtc 18215172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 19213913 - 19213881
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcg 106  Q
    ||||||||||||||||||||||| |||||||||    
T  19213913 actatgaagcacggacactcctcggattaggcg 19213881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 22602710 - 22602742
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  22602710 cgacaccgacacatataattacactgaattatg 22602742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 28943351 - 28943383
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgt 109  Q
    |||||||||||||||||||||||||||| ||||    
T  28943351 atgaagcacggacactcctcagattaggtgtgt 28943383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 32093953 - 32093989
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  32093953 actatgaagcacgaacactcctcggattaggcgtgtc 32093989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 17751830 - 17751740
Alignment:
Q  20 actacttcaaagtttaatgaaacaatagatgaaataaatattgtattgacacacactatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  17751830 actacttcaaagtttaatgaaacaatagatgaaataaatattgtattgacacacactatgaagcgcggacactcctcggattaggcgtgtc 17751740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 17760817 - 17760727
Alignment:
Q  20 actacttcaaagtttaatgaaacaatagatgaaataaatattgtattgacacacactatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  17760817 actacttcaaagtttaatgaaacaatagatgaaataaatattgtattgacacacactatgaagcgcggacactcctcggattaggcgtgtc 17760727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 3025668 - 3025578
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||| |||||| |||||| ||||||   ||||||||| | |||||||| ||||| ||||||||||||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatg 3025578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 40332307 - 40332218
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||| |||||||||||||| ||||||||| ||| | |||||| ||||||||| | ||| |||||||||| | ||||||||||||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatg 40332218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 18407838 - 18407746
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||||  ||||||||||||  ||||| | ||| ||||| | |||| || |||||| | ||||||||||||||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatg 18407746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 17737696 - 17737641
Alignment:
Q  20 actacttcaaagtttaatgaaacaatagatgaaataaatattgtattgacacacac 75  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||| || |||||    
T  17737696 actacttcaaagtttaatgaaacaattgatgaaattaatattgtattaacgcacac 17737641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 926730 - 926815
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaa 162  Q
    |||||||||||||||||||| ||| | || |||| | |||| | |||||||||   |||||||||||||| |||||||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaa 926815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 4298830 - 4298918
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||||| | |||| ||||||||||||  || ||||||||||| | |||||||| | |||||||    
T  4298830 ctatgaagcacg-acactcctcagattaggcgtgtc-ccgtgtcgaacacgtgtca--tctgacaccgacacttgtaattacattaaattatg 4298918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 36450694 - 36450783
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatt 164  Q
    ||||||||||| |||||||||| |||||||||||||   |||| | ||||| ||| | ||||||||| |||| | |||||||||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaatt 36450783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 5813707 - 5813627
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacact 159  Q
    ||||||||||||||||||  |||||||||||| | |||| | ||||||||| | |||||||||||||| | || |||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacact 5813627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 21465542 - 21465470
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||||||||||| ||||||||| || | |||| | ||||||||| | |||||||| ||||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacg 21465470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 22652106 - 22652034
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||||||| |||||| |||||| | |||| | |||| |||| | |||||||||||||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacg 22652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 29510233 - 29510304
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacac 146  Q
    |||||||||||||||||||||| ||||||| ||||| | |||| | ||||| ||| | ||||||||||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 29510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 34450958 - 34451033
Alignment:
Q  72 acactatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||||||||||||  ||| ||||||||| | ||||   ||||||||| | |||||||||||||||    
T  34450958 acactatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacg 34451033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 4786276 - 4786370
Alignment:
Q  73 cactatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||| |   || || | ||||||  | | |||||| |||| | |||||||||||||| ||||||||||||||||||||    
T  4786276 cactatgaagcacggacactctttgaataagccatgtctcgttatcgaacacatgtcgtatccgacaccgacacatataattacactgaattatg 4786370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 22197671 - 22197736
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacac 140  Q
    |||| |||||||||||||||||||||||||||||   | |||| | ||||||||||| ||||||||    
T  22197671 ctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac 22197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 14134818 - 14134726
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||| ||||||||||||||  ||||||||||||   |||  | ||||||||| | |  ||||||||||  ||||||||||||||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatg 14134726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 15734230 - 15734182
Alignment:
Q  23 acttcaaagtttaatgaaacaatagatgaaataaatattgtattgacac 71  Q
    |||||||||||||||||||||||| |||||||  |||||||||| ||||    
T  15734230 acttcaaagtttaatgaaacaatacatgaaatttatattgtattaacac 15734182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 24413499 - 24413591
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||| ||| |||||| |||||| |  ||| | |||||  || | |||||||| ||||| ||||||||| ||||||||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatg 24413591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 31109463 - 31109547
Alignment:
Q  80 aagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatt 164  Q
    ||||||||||||||||| ||||||||||||| ||||||   |||||   ||| |||||||| ||||| |||| ||| ||||||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtcatacacgacacatgtccgacactgacacatatagttagactgaatt 31109547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 43737752 - 43737836
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactg 160  Q
    ||||||||||||||||||||  ||| |||||| || | ||||   |||| |||| | |||||||||||||| |||||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactg 43737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 26902104 - 26902139
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||||||| |||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtc 26902139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 31514973 - 31514938
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  31514973 ctatgaagcacggacactcctcggattaggcgtgtc 31514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 126295 - 126369
Alignment:
Q  83 cacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattaca 157  Q
    |||||||||||||| |||||| |||||| | || | | ||||||||| | |||||||| ||||| ||||||||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 20679337 - 20679427
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||| ||||||||||| | | ||||||||| | |||| | ||||||||    || ||||||||||| ||||||||||||||| ||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatg 20679427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 3951476 - 3951561
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactg 160  Q
    |||||||||||||| ||||||  ||||||||||||  | ||||   ||||||||| | || ||||||||||| ||||| |||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactg 3951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 4498423 - 4498342
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataatta 155  Q
    |||| |||||||||||||||||| ||||||| |||| || |||| | | || ||| || | |||||||||||| ||||||||    
T  4498423 actaagaagcacggacactcctctgattaggtgtgtttcggtgtcggatacatgttatattcgacaccgacacttataatta 4498342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 11927015 - 11927052
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctc 112  Q
    ||||||||||||||||||| || |||||||||||||||    
T  11927015 ctatgaagcacggacactcatcggattaggcgtgtctc 11927052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 15023199 - 15023288
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattat 166  Q
    ||||| || ||||||||||| |||||| |||||  |||  | | ||||||||| | ||||||| |||||| | |||||||||||||||||    
T  15023199 atgaatcatggacactcctcggattagacgtgttccagcatcggacacgtgtcgtatccgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 8847315 - 8847283
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  8847315 cgacaccgacacatataattacactgaattatg 8847283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 11927086 - 11927118
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatg 11927118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 15816058 - 15816130
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||| ||| ||||||||||||| | |||| | |  |||||| | ||||||||| |||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacg 15816130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 26902175 - 26902207
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  26902175 cgacaccgacacatataattacactgaattatg 26902207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 29447574 - 29447502
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||||||| |||||| | |||| | |||| | |||| |||| | || ||||||||||||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacg 29447502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 31580071 - 31580159
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||| | |||| |||| ||||||| |||| || |||| ||||| |||||   ||||||| |||||| |||||||||||| |||||||    
T  31580071 gaagcatgaacacccctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatg 31580159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 33405324 - 33405416
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||| ||||||||||||| |  |||||| ||||||   ||||   ||| ||||| | |||||||||||||| |||||||||||| |||||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatg 33405416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 37598950 - 37598861
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatt 164  Q
    |||||||||||||||||||||| ||||||||||||| || ||| | ||||||||| | |||||||||||||| |||||||||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt 37598861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 22515826 - 22515919
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| | | | ||||| | |||||||||||||| | |||||||||| |||||||    
T  22515826 actatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatg 22515919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 18337448 - 18337356
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||| |||| |||| |||||| | ||||||||  | |||||||||||||| | ||||||||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatg 18337356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 46348322 - 46348414
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattat 166  Q
    |||||||||||||||||| |||| ||| ||||||||||| |||| | ||||||||| | |||||||||||||| | |||||||||| ||||||    
T  46348322 actatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattat 46348414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 1815376 - 1815284
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||| ||||| |||||||||||||||||||||| | |||| | ||| ||||| | || ||||||||||| | ||||||||||||||||||    
T  1815376 ctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatg 1815284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 5898206 - 5898298
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||| ||||||||||||||||| |||||| |||||| | |||| | ||||||||| | || ||||||||| | ||||||||||||||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatg 5898298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 51410144 - 51410052
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| | ||||||  ||||||||||||||| |||| | | ||||||| | |||||||||||||| | ||||||||||||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 51410052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 42359391 - 42359478
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatt 164  Q
    |||||||||||||||||||| ||||||||||||| | |||| | ||||  ||| | |||||||||||||| | |||||||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaatt 42359478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 38078601 - 38078693
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| | ||||||| |||||||||||||   |||| ||||| ||||| | |||||||||||||| | |||||||| |||||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatg 38078693  T

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Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 1486646 - 1486741
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttc-----cgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||| |||||||||| ||||||||||||| | |||| | ||||||||| | ||     |||||||||||| ||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatg 1486741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 40258874 - 40258965
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||| ||||||||||| |||||||||||||   |||| | ||| ||||| | || ||||||||||| | ||||||||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatg 40258965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 2218350 - 2218312
Alignment:
Q  72 acactatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2218350 acactatgaagcacggacactcctcagattaggcgtgtc 2218312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 7353455 - 7353525
Alignment:
Q  98 gattaggcgtgtctcagtgt-ggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||| |||| ||||||||| | |||||||||||  |||||||||||| |||||||    
T  7353455 gattaggcgtgtctcagtgtcggaaaacgtgtcatgttcgacaccgacatatataattacactaaattatg 7353525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 40181976 - 40181898
Alignment:
Q  89 cactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||| ||||||||||||| | |||| | ||||||||  | ||||||||||| || ||||||||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatg 40181898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 6427594 - 6427522
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||||||| |||||||||||||||| | |||| | ||||||||| | |||||| || |||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacg 6427522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 16812676 - 16812640
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||||||||||||||||||    
T  16812676 actatgaagcacggacactcctcagattaggcgtgtc 16812640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 31694639 - 31694711
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||||||||||||||||||||  | |||| ||| | ||||  | |||||||||||||||    
T  31694639 ctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacg 31694711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 40917879 - 40917807
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||| ||||| ||||||||||||| | |||| | ||||||||| | ||| |||||||||||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacg 40917807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 32461393 - 32461464
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacac 146  Q
    |||||||||||||||||| ||  ||||||||||||| ||||||   ||||||||| | ||||||||||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac 32461464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 166
Target Start/End: Original strand, 5927281 - 5927371
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattat 166  Q
    |||||||||||||||||||||||||||||| ||| ||  ||| | |||  |||||| |||||||| ||||| | |||||||| | ||||||    
T  5927281 tatgaagcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacacttgtaattacattaaattat 5927371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 21365992 - 21366034
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgt 21366034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 47989628 - 47989555
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||||||||||| ||||||||||||| |  |||   ||| ||||| | |||||||||||||||    
T  47989628 actatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacg 47989555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 9828174 - 9828102
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||||||| |||||| |||||| | |||| | ||||||||| | || ||||| ||||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacg 9828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 34712323 - 34712415
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||   ||||| |||||| |||||| | |||||||||     |||||| ||||| |||||||||||| |||||||    
T  34712323 ctatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtccgacacgacactgacacatataattacactaaattatg 34712415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 35702541 - 35702577
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||| |||||||||||||    
T  35702541 actatgaagcacggacactcctcggattaggcgtgtc 35702577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 17705546 - 17705581
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||||||||| |||||||    
T  17705546 ctatgaagcacggacactcctcagattaagcgtgtc 17705581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 18556384 - 18556427
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||    
T  18556384 actatgaagcacggacacttctcggattaggcgtgtcccagtgt 18556427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 21038202 - 21038163
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  21038202 tgaagcacagacactcatcagattaggcgtgtctcagtgt 21038163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 22947849 - 22947814
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  22947849 ctatgaagcacggacactcctcggattaggcgtgtc 22947814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 26830701 - 26830615
Alignment:
Q  80 aagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||| ||||||||||||| | || | ||||||||||  | || |||| |||||| |||||||||| | |||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgaca-cgacacttataattacatttaattatg 26830615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 30359484 - 30359449
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||||||| ||||||||    
T  30359484 ctatgaagcacggacactcctcagatttggcgtgtc 30359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 39130711 - 39130798
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattat 166  Q
    |||||| |||||||| |  ||||| ||||||| || ||| || |||||||  | |||||||||||||| |||||||||||| ||||||    
T  39130711 gaagcatggacactctttggattaagcgtgtcccaatgtcgagcacgtgttgtgtccgacaccgacacatataattacactaaattat 39130798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 15765877 - 15765835
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    ||||||||||||||||||| || ||||||||||||| ||||||    
T  15765877 ctatgaagcacggacactcttcggattaggcgtgtcccagtgt 15765835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 18190046 - 18190140
Alignment:
Q  73 cactatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||| |  ||||||||| ||||||| ||||| | |||| | ||||||||  | || |||| |||||| | ||||||||||||||||||    
T  18190046 cactatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatg 18190140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 28674897 - 28674827
Alignment:
Q  97 agattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||| | ||| ||||| | || |||||| |||  |||||||| |||||||||||    
T  28674897 agattaggcgtgtctcagtgttggacaagtgtcgtgtctgacaccaacatatataattatactgaattatg 28674827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 29163323 - 29163413
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||| ||||| ||| |||||| |||||| | ||||    |||||||| | |||||||||||||| |||||||| | |||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatg 29163413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 30749901 - 30749867
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||| ||||||||||||||||||||    
T  30749901 tccgacaccgacacatataattacactgaattatg 30749867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 30771352 - 30771318
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||| ||||||||||||||||||||    
T  30771352 tccgacaccgacacatataattacactgaattatg 30771318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 16297223 - 16297256
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||| |||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtc 16297256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 52903310 - 52903277
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattat 166  Q
    |||||||||||||| |||||||||||||||||||    
T  52903310 tccgacaccgacacatataattacactgaattat 52903277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 5944342 - 5944310
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  5944342 cgacaccgacacttataattacactgaattatg 5944310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 9630560 - 9630596
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  9630560 actatgaagcacgaacactcctcggattaggcgtgtc 9630596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 10577676 - 10577760
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactg 160  Q
    ||||||||||||||||||||  ||| ||||||||| | ||||   ||||| ||| | |||| | ||||||| |||||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactg 10577760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 24334703 - 24334739
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattatgca 169  Q
    |||||||||||||| | ||||||||||||||||||||    
T  24334703 tccgacaccgacacttgtaattacactgaattatgca 24334739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 25934746 - 25934674
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||||||  ||| |||||| || | ||||   ||||||||| | |||||||||||||||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacg 25934674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 34371772 - 34371740
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  34371772 cgacaccgacacatataattacactgaattatg 34371740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 44482289 - 44482257
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  44482289 cgacaccgacacatataattacactgaattatg 44482257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 55401194 - 55401102
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||||||||||||||| |||| | ||||||||| | |||||||||||||| | |||||||||| |||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatg 55401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 40993275 - 40993367
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||| ||||||||||| ||||||||||||| | |||| | ||| ||||| | |||||||||||||| ||||||||||||||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatg 40993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 167
Target Start/End: Complemental strand, 35223058 - 35222965
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||||| ||| | ||||||| | ||||   ||||||||||| |||||||||||||| |||||||||| |||||||||    
T  35223058 actatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatg 35222965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 10955074 - 10954979
Alignment:
Q  75 ctatgaagcacggacact---cctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||   |||| ||||||||||||| |||||| | ||||||||| | |||||||||||||| | | ||||||||||||||||    
T  10955074 ctatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatg 10954979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 18427068 - 18426976
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||| |||||||||||||||||||||| ||||| | |||  | ||||||||| | |||||||||||||  ||||||||||| ||||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatg 18426976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 20503584 - 20503492
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||||||||||||| | ||||   ||| ||||| | ||| |||||||||| | ||||||||||||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatg 20503492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 8789489 - 8789582
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaaca--cgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||| ||||||||||||||| ||||   |||   ||||| | |||||||||||||| ||||||||||| ||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatg 8789582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 13845465 - 13845550
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactg 160  Q
    |||||||||||||||||||||  ||| ||||||||||| ||||   |||||| || | |||||||||||||| |||||||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactg 13845550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 28918120 - 28918028
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttc--cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||| ||||||||||  ||||||||||||| |||||| | ||||||||| | ||  |||||||||||| | ||||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatg 28918028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 8842448 - 8842356
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| |||||||||||||||| | |  |||| ||||| | || ||||||||||  |||||||||||  |||||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacatatataattacaccaaattatg 8842356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 41961579 - 41961651
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||| ||| ||||||||||||| |||||| | ||||||||| | ||||| |||||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacg 41961651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 4987222 - 4987293
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgt 148  Q
    |||||| ||||||||||||| ||||||||||||| | |||| | ||||||||| | ||| ||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgt 4987293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 11610628 - 11610593
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||||||||||||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtc 11610593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 32804485 - 32804572
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||||||||||||| | ||||||  | ||| ||||| | |||||    ||||| |||||||||||| |||||||    
T  32804485 tatgaagcacggacactcctcagattaggcgtttttcagtggcggacatgtgtcgtgtccga----gacacatataattacactaaattatg 32804572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 3631796 - 3631711
Alignment:
Q  82 gcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||| || ||||||||||   |||| | ||| ||||| | |||||||| | ||| ||||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatg 3631711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 25093617 - 25093532
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatt 164  Q
    |||||||| |||||| |||||||||  |||  ||||||| | ||| ||||  | |||||||||||||| |||||||||||||||||    
T  25093617 gaagcacgaacactcttcagattagaagtgcttcagtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaatt 25093532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 27505370 - 27505273
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttc-----cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| |||||||| |||| | |||| | ||||||||| | ||     |||||||||||| | |||||||||| |||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatg 27505273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 34185051 - 34185116
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgaca 139  Q
    ||||||||||||||||||||||| ||||||||||||| | |||| | |||| |||| | |||||||    
T  34185051 actatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgaca 34185116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 14217021 - 14216957
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacac 140  Q
    ||||||||||||||||| ||| ||||||| ||||| |||||| | ||||||||| | ||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 14223150 - 14223086
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacac 140  Q
    ||||||||||||||||| ||| ||||||| ||||| |||||| | ||||||||| | ||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 16789141 - 16789070
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||||||||||| |||||| ||||| | |||| | ||| ||||||| |||||||| ||||||    
T  16789141 ctatgaagcacggacactcctcaaattaggtgtgtc-ccgtgttggacatgtgtcatgtccgacactgacacg 16789070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 4990912 - 4990947
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtgtc 4990947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 7171620 - 7171529
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattat 166  Q
    ||||||||||   ||||||||  ||||||||||||| | |||| | ||||||||| | ||||||||| |||| | ||||||||| |||||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattat 7171529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 24204983 - 24205073
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtca-tttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||  ||||||||||||   |||| | ||||| |||| | ||||||| |||||| ||||||||||||| ||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgaca-cgacacttataattacactgtattatg 24205073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 2408590 - 2408640
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacg 125  Q
    |||||||||||||| |||||| |||||||||||||| | |||| |||||||    
T  2408590 ctatgaagcacggagactccttagattaggcgtgtcccggtgtcgaacacg 2408640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 7928511 - 7928477
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||| ||||||||||||||||||||    
T  7928511 tccgacaccgacacatataattacactgaattatg 7928477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 34307738 - 34307812
Alignment:
Q  98 gattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg-----tataattacactgaattatg 167  Q
    |||||||||||||||||| | ||| ||||||| | |||||||||||||||     ||||||||||||||| ||||    
T  34307738 gattaggcgtgtctcagtatcgaagacgtgtcgtgtccgacaccgacacgacacttataattacactgaaatatg 34307812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 8383318 - 8383285
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattat 166  Q
    |||||||||||||| |||||||||||||||||||    
T  8383318 tccgacaccgacacttataattacactgaattat 8383285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 15544800 - 15544767
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtct 111  Q
    ||||||||||||||||||||||| ||||||||||    
T  15544800 tgaagcacggacactcctcagataaggcgtgtct 15544767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 23657860 - 23657767
Alignment:
Q  73 cactatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattat 166  Q
    |||||||||| |||||||||  || ||||||| ||||| | || | | |||  |||||| ||||||||||| |  |||||||||||||||||||    
T  23657860 cactatgaagtacggacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacaccgatatttataattacactgaattat 23657767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 26492145 - 26492234
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatt 164  Q
    ||||||||| |||||| ||||| |||||| |||||||  ||||   ||| ||||| | ||||||||||| || | |||||||||||||||    
T  26492145 ctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaatt 26492234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 4466539 - 4466631
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattat 166  Q
    |||||||||||||||||||||||  || || |||||| |||||| | |||| | |  | |||||||||| ||| ||||  |||||||||||||    
T  4466539 actatgaagcacggacactcctcgaataagccgtgtcccagtgtcggacacatcttgtatccgacaccggcacatatagctacactgaattat 4466631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 8039760 - 8039836
Alignment:
Q  71 cacactatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||| || |||| || ||||| ||||||| | |||| | ||| || |||| |||||||||||||||    
T  8039760 cacactatgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacg 8039836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 23292924 - 23293018
Alignment:
Q  73 cactatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||||| ||||||||||||| | |||| | ||||||||| | |||||||||||||| | |||||| |||||||||||    
T  23292924 cactatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatg 23293018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 16073513 - 16073420
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatgc 168  Q
    |||||||||| ||||||||||| |||||||||||||| ||||| | ||| || || | |||||||||||||| | |||||||||||||||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgc 16073420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 34306744 - 34306828
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacact 159  Q
    |||||||||||| ||| ||||||||||||||||||||| |||| | ||||||||| | |||||||||||||| | ||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 34306828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 28964187 - 28964280
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||| | | | ||||| | |||||||| ||||| | ||||||||||||||||||    
T  28964187 actatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatg 28964280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 2361915 - 2362007
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||   ||||| ||| | |||||||||||||| | |||||||||| |||||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatg 2362007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 49431145 - 49431053
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||| ||||| ||||||||||| ||| ||||||||| | |||| | ||||||||| | |||||||||||||| | ||||||||||||||||||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatg 49431053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 8423656 - 8423750
Alignment:
Q  73 cactatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||| ||||||||||| ||| ||||||||||||| | |||| | |||  |||| | |||||||||||||  ||||||||||||||||||||    
T  8423656 cactatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatg 8423750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 14465006 - 14465059
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtc 129  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtc 14465059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 21945610 - 21945530
Alignment:
Q  87 gacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||| ||||||||||||  | |||| | ||| ||||||| |||||||||||||| | ||||||||||||||||||    
T  21945610 gacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatg 21945530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 35157924 - 35158017
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||| ||| ||||| ||||||  | |||| | ||| ||||| | || ||||||||||| |||||||||||| |||||||    
T  35157924 actatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatg 35158017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 12895214 - 12895306
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||| ||||||||||||| |  ||| | | || |||| | |||||||||||||| |||||||||||  |||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatg 12895306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 28084640 - 28084588
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtca 130  Q
    ||||||||||||||||||| ||||||||||||| |||||| | ||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtca 28084588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 715545 - 715639
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttcc--gacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||||||||||||| | |||| | ||| ||||| | | |  |||||| |||| | ||||||||||||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatg 715639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 752871 - 752965
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttcc--gacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||||||||||||| | |||| | ||| ||||| | | |  |||||| |||| | ||||||||||||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatg 752965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 114
Target Start/End: Original strand, 3064868 - 3064907
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcag 114  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  3064868 ctatgaagcacggacactcctcggattaggcgtgtctcag 3064907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 11596297 - 11596332
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||||||||||||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtc 11596332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 18513175 - 18513210
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||||||||||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtc 18513210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 24343632 - 24343534
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtc-atttccgacaccgacacg-----tataattacactgaattatg 167  Q
    ||||||||||||||||||||||||| |||||||||| | |||| | ||||| |||  | || ||||||||||||     ||||||||||||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgacacctataattacactgaattatg 24343534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 54580009 - 54580055
Alignment:
Q  121 acacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||    
T  54580009 acacgtgtcgtgtccgacaccgacacttataattacactgaattatg 54580055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 40179599 - 40179668
Alignment:
Q  98 gattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||   |||| ||||| ||||| | |||||||||||| | ||||||||||||||||||||    
T  40179599 gattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatg 40179668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 44081508 - 44081561
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtc 129  Q
    ||||||||||| |||||| ||||||||| | ||||||||||| |||||||||||    
T  44081508 tatgaagcacgaacactcttcagattagacatgtctcagtgtcgaacacgtgtc 44081561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 4672025 - 4672117
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||| |||||||||  |||||| | |||  |||||| |||||||| |  | |||||||||||||| ||||  ||||||||||||||    
T  4672025 ctatgaagcacagacactccttggattagacatgttccagtgtcgaacacgttttgtatccgacaccgacacatatagctacactgaattatg 4672117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 19482798 - 19482726
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||| ||||||||| ||||||| ||||| |||||| | ||||||||| | ||| | |||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacg 19482726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 164
Target Start/End: Original strand, 20950368 - 20950456
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatt 164  Q
    ||||||| |||| |||||||  ||||| |||||| || |||| ||||| || || | || ||||||||||| |||||||||||||||||    
T  20950368 tatgaagtacgggcactccttggattatgcgtgtttctgtgttgaacatgtatcgtgtctgacaccgacacatataattacactgaatt 20950456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 35161155 - 35161063
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||  || ||||||| ||||  | |||| | ||||||||| | |||||| | || || ||||||||||||||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatg 35161063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 5775304 - 5775339
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  5775304 ctatgaagcacggacactcctcggattaggcgtgtc 5775339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 30982808 - 30982879
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||| |  ||||||||||||| | |||| | ||||||||| | || ||||||||||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacg 30982879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 40965389 - 40965354
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtct 111  Q
    |||||||||| |||||||||||||||||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtct 40965354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 53381530 - 53381625
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtca-tttccgacaccgacacg-----tataattacactgaatt 164  Q
    |||||||||||||||||||||| ||||||| ||||| | |||| | | ||| |||| | |||||||||||||||     |||||||||||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacacgacgcctataattacactgaatt 53381625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 4157266 - 4157176
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||| ||||||||||  |||||| || |||| |||| | ||| ||||| | |||||||||||||| | ||||| |||| |||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatg 4157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 4157553 - 4157463
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||  ||||||||||  ||||||||| |||| |||| | ||| ||||| | |||||||||||||| | ||||| |||| |||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatg 4157463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 4383484 - 4383450
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||| |||||||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtgtc 4383450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 29205587 - 29205545
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgt 29205545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 3947702 - 3947799
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttc-----cgacaccgacacgtataattacactgaattatgc 168  Q
    ||||||||||||||||||||| ||||||| |||||   |||| | ||||||||| | ||     |||||| ||||| | |||||||||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgc 3947799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 5922532 - 5922573
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    |||||||||  |||||||||||||||||||||||| ||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgt 5922573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 22440559 - 22440592
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||| |||||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtc 22440592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 2054163 - 2054127
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  2054163 actatgaaacacggacactcttcagattaggcgtgtc 2054127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 18966628 - 18966596
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgt 107  Q
    ||||||||||||||||||||| |||||||||||    
T  18966628 ctatgaagcacggacactccttagattaggcgt 18966596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 23386278 - 23386242
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  23386278 actatgaagcacggacactcctctgattaggcatgtc 23386242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 28000672 - 28000712
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    ||||||||||||||||| |||||||||| ||||||| ||||    
T  28000672 atgaagcacggacactcatcagattaggtgtgtctcggtgt 28000712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 42015079 - 42015047
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgt 107  Q
    ||||||||||||| |||||||||||||||||||    
T  42015079 ctatgaagcacggtcactcctcagattaggcgt 42015047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 8917 - 8833
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacact 159  Q
    |||||||||||||| ||||||||||||||||||||||| |||| | ||||||||| | |||||||||||||| | ||||||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 8833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 21576685 - 21576777
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||||||||||||| ||||||   ||||||||| | ||||||| |||||| | ||||||||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatg 21576777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 21190998 - 21191088
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||| ||||||||||||| | | || | ||||||||  | |||||||||||||| | ||||||||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatg 21191088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 43565000 - 43564908
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||| ||| ||||||||||||| | | || | |||| |||| | |||||||||||||| |||||||||||| |||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatg 43564908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 39698672 - 39698599
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| | | || |||| | |||||||||||||||    
T  39698672 actatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacg 39698599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 30502330 - 30502418
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatta 165  Q
    |||||||||| ||| ||||  |||||||| |||| |||||| | ||| ||||| | |||||||||||||| ||||||||||||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaatta 30502418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 30542673 - 30542761
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatta 165  Q
    |||||||||| ||| ||||  |||||||| |||| |||||| | ||| ||||| | |||||||||||||| ||||||||||||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaatta 30542761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 30098977 - 30099071
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatgc 168  Q
    |||| |||||||| ||||||||  ||| ||||||||| | ||||   ||||||||| | |||||||||||||| ||||||||||| |||||||||    
T  30098977 actacgaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatgc 30099071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 32766872 - 32766944
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||||||||||||||||| ||| ||   |||| | ||||||||| ||| |||||||||||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacg 32766944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 39268541 - 39268609
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacac 146  Q
    ||||||||||||||||||| ||||||||||||| |||||| | |||| |||| | ||| ||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacac 39268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 42893479 - 42893387
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||| |||||||||||| ||||||||||||   |||| | ||||||||  | || ||||||||||| | ||||||||||| ||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatg 42893387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 14873641 - 14873588
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgt 128  Q
    |||||||||||||||||||||| ||||||||||||| | |||| | ||||||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgt 14873588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 31084447 - 31084382
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacac 140  Q
    ||||||| |||||||||||||| |||||||| |||| |||||| | ||||||||| | ||||||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 17123167 - 17123131
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||| |||||||||||||    
T  17123167 actatgaagcacggacactcctcggattaggcgtgtc 17123131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 28588614 - 28588706
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||| |||||||| || ||||| |||||||   ||||   | | ||||| | |||||||||||||| ||||||||||||||||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatg 28588706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 35017163 - 35017127
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||| |||||||||||||    
T  35017163 actatgaagcacggacactcctcggattaggcgtgtc 35017127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 42029871 - 42029779
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||| ||||||||||||||| ||| ||||||||||  |||    ||| ||||| | ||||||||||| || |||||||||| |||||||||    
T  42029871 ctatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattacattgaattatg 42029779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 10298669 - 10298634
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgtc 10298634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 19820328 - 19820363
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtc 19820363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 22423764 - 22423799
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||| |||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtc 22423799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 40000493 - 40000535
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    |||||||||||||||||||||||||| || |||||||| ||||    
T  40000493 ctatgaagcacggacactcctcagataagacgtgtctcggtgt 40000535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 16304365 - 16304455
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattat 166  Q
    ||||||||||||||||| ||||| |||||| |||||||| |||| |  |||||||| | ||||| || |||||  | ||||||||| ||||||    
T  16304365 actatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccgatactgacac--acaattacactaaattat 16304455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 110
Target Start/End: Complemental strand, 43001922 - 43001889
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||| |||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtc 43001889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 2437030 - 2436994
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtct 111  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  2437030 ctatgaagcacgaacactcctcggattaggcgtgtct 2436994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 4105374 - 4105338
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtctcagt 115  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagt 4105338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 11686068 - 11686000
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccga 143  Q
    |||||||||||||||||||||| |||||| |||| ||  || | | ||||||||| | |||||||||||    
T  11686068 ctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga 11686000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 21194063 - 21194151
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaat 163  Q
    |||| ||||||||||||||||| ||||||||||| | | ||||   ||| ||||| | ||| ||||| | || ||||||||||||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaat 21194151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 21522880 - 21522808
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||| |||||||||||| |  ||||||||||||| | |||  | ||||||||| | |||||||||||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacg 21522808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 21533446 - 21533374
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||| |||||||||||| |  ||||||||||||| | |||  | ||||||||| | |||||||||||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacg 21533374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 24906251 - 24906287
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||||||  ||||||||||||    
T  24906251 actatgaagcacggacactcctcgaattaggcgtgtc 24906287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 17841530 - 17841621
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||| |||| | |||||||||| ||| | |||||||||| |||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatg 17841621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 167
Target Start/End: Complemental strand, 28152218 - 28152125
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||| ||||||||| |||||||| |||| | |||| | ||||||||| | |||||||||||||| | ||||||||||||||||||    
T  28152218 actatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 28152125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 28715414 - 28715322
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||| |||  |||||||||||| | |||| ||||||||||| | |||||||||||||| | ||||||||||||||||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 28715322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 34595253 - 34595161
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||||||| ||||| | ||||   ||||||||| | |||||||||||||| | ||||||||||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 34595161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 10339054 - 10339126
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||||||| ||||||||||||| |||||| | ||| ||||| | |||||||||||||||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacg 10339126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 13360312 - 13360404
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||| || |||||||||||||||||||| | |||  |||  | || |||||||| || ||||||||||||||||||||    
T  13360312 actatgaagcacggacactcttcggattaggcgtgtctcagtgtcggaca-ttgttgtgtctgacaccgaaacatataattacactgaattatg 13360404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 4878061 - 4877970
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||||||||||||| | |||| | ||| ||||| | |||||||||||||| | |||||| ||| |||||||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtc-ctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatg 4877970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 7378098 - 7378006
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||| |||||||||| |||||| | |||| | |  | |||| | |||||||||||||| |||||||||| |||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatg 7378006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 8365448 - 8365520
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||| ||||||| ||||||||||||| |||||| | ||||||||| | ||||| |||||||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacg 8365520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 29021008 - 29020938
Alignment:
Q  98 gattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatgc 168  Q
    ||||||||||| ||| |||| ||||||||||| | ||||||||  |||| |||||||||||||||||||||    
T  29021008 gattaggcgtgcctcggtgtcgaacacgtgtcgtgtccgacacaaacacctataattacactgaattatgc 29020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 32978842 - 32978931
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||  |||||| |||||| | |||| | ||| ||||| | |||||||||||||| | |||||||||| |||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatg 32978931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 6898221 - 6898313
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| |||||| || |||||||||||| || |||| | |||||  || | |||||||||||||| | |||||||||| |||||||    
T  6898221 ctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatg 6898313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 426478 - 426513
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtc 426513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 8776908 - 8776962
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtc 129  Q
    |||||||||||||||||||||| ||||||| ||||||| |||| | |||||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtc 8776962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 17435329 - 17435259
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgaca 145  Q
    |||||||| |||||||||  ||||||||| |||||| |||||| ||||||||||| | ||||||| |||||    
T  17435329 ctatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgaca 17435259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 32511605 - 32511698
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcag-tgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||||| ||||||||||| ||| | |||   |||  |||| | ||||||||| |||| ||||||||||||||||||||    
T  32511605 actatgaagcacggacactcctccgattaggcgtg-ctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatg 32511698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 17327590 - 17327655
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacac 140  Q
    |||||||||||||||||||||| ||||||||||||| | ||||   ||||||||| | ||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 167
Target Start/End: Complemental strand, 24645601 - 24645508
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||| || |||||| |||||||  |||| | ||||||||| | || ||||||||||| | ||| || |||||||||||    
T  24645601 actatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatg 24645508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 5569866 - 5569834
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgt 109  Q
    |||||||||||||||||||||||||||||||||    
T  5569866 atgaagcacggacactcctcagattaggcgtgt 5569834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 16766827 - 16766755
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||| || || ||||||||||||| | |||| | ||||||||  | |||||||||||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacg 16766755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 9629514 - 9629471
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||    
T  9629514 actatgaagcatggacactcctcggattagacgtgtctcagtgt 9629471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 10770607 - 10770642
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||||||||||| ||||    
T  10770607 ctatgaagcacggacactcctcagattaggcatgtc 10770642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 7265591 - 7265625
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||| ||||||||||||||||||||    
T  7265591 tccgacaccgacacatataattacactgaattatg 7265625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 7723199 - 7723233
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgt 109  Q
    |||||||||||||||||||||| ||||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 7938219 - 7938177
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgt 7938177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 33818087 - 33818045
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    ||||||| ||| ||||||||||||||||||| |||||||||||    
T  33818087 ctatgaatcacagacactcctcagattaggcatgtctcagtgt 33818045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 10842652 - 10842615
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctc 112  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  10842652 ctatgaagcacggacactcctcggattagccgtgtctc 10842615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 19040448 - 19040379
Alignment:
Q  98 gattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||| ||||| ||  || ||||| ||||| | |||||||| ||||| ||||||||||||||||||||    
T  19040448 gattaggtgtgtcccaaagttgaacatgtgtcgtgtccgacacagacacatataattacactgaattatg 19040379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 21924933 - 21924966
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattat 166  Q
    |||||||||||||| |||||||||||||||||||    
T  21924933 tccgacaccgacacatataattacactgaattat 21924966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 23771699 - 23771610
Alignment:
Q  73 cactatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaa 162  Q
    |||||||||  | |||||||| |||| |||| |||||||| |||| | |||| |||| | |||||||||||||  | |||||||||||||    
T  23771699 cactatgaaatatggacactcttcaggttagacgtgtctctgtgtcggacacatgtcgtgtccgacaccgacatttgtaattacactgaa 23771610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 28919488 - 28919517
Alignment:
Q  75 ctatgaagcacggacactcctcagattagg 104  Q
    ||||||||||||||||||||||||||||||    
T  28919488 ctatgaagcacggacactcctcagattagg 28919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 31385048 - 31384995
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtc 129  Q
    ||||||||||||||||||||  ||||||||||||| | |||| | |||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtc 31384995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 7027301 - 7027269
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatg 7027269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 9025494 - 9025526
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  9025494 cgacaccgacacatataattacactgaattatg 9025526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 9658998 - 9658906
Alignment:
Q  76 tatgaagcacggacactcctcaga-ttaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||  || ||||||||||  | ||||   ||||||||| | ||  |||||||||  ||||||||||||||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatg 9658906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 9997829 - 9997793
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||| |||||||||||||||||||||||||| |||||    
T  9997829 actacgaagcacggacactcctcagattaggggtgtc 9997793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 33001229 - 33001321
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||  |||||| |  |||||||||| | || ||||   ||||||||| | |||||||||||||| |||||||||| | |||||||    
T  33001229 ctatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatg 33001321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 28596587 - 28596496
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||| ||||||| |||||  ||||| | ||||||||| | |||||||||||||| |||||||||||||| |||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatg 28596496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 2438661 - 2438751
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||| ||||||||||||| | |||| | ||| ||||| | |||||||||||||| | ||||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 2438751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 35056998 - 35056926
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||||||||||||||||||||||| || |||| | ||||||||| | |||||||||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacg 35056926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 37559096 - 37559004
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||||| ||||||  | |||| | ||||||||||  |||||||||||||| | |||||||| |||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatg 37559004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 26769641 - 26769571
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgaca 145  Q
    |||||||||||||||||||||| ||||||||||||| |||||| | ||||||||| | ||||| |||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgaca 26769571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 18840952 - 18841045
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||||||||||||||| ||||||| ||||| | |||| | ||| ||||| | || ||||||||||| | |||||||||| |||||||    
T  18840952 actatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatg 18841045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 30717459 - 30717531
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||||||  |||||||||| || |||||| ||||||||||| | ||||||| |||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacg 30717531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 44635618 - 44635570
Alignment:
Q  69 cacacactatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  44635618 cacacgctatgaagcacggacactcctcagattaggcgtgtctcggtgt 44635570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 27084388 - 27084318
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgaca 145  Q
    ||||||||||  |||||||||| ||||||||||||||| |||| | ||||||||| | |||||||||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgaca 27084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 15972992 - 15972903
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatt 164  Q
    |||||||||||||||| || || ||||||| ||||| | | || | ||||||||| | |||||||||||||| | |||||||||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaatt 15972903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 38117098 - 38117191
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||| |||| ||||||||||||| | |||| | ||||||||  | ||||||||| |||| | ||||||||| ||| ||||    
T  38117098 actatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatg 38117191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 20242667 - 20242759
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||||| ||||||| || ||| |||||||||   ||||   ||||||||  | |||||||||||||| ||||||||||||||||||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatg 20242759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 34993922 - 34994014
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||   |||||||||||| |||||| | |||| |||| | | |||||| ||||| |||||||||| |||||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatg 34994014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 37419873 - 37419801
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||||||| ||||||||||||| | |||| | |||||  || | |||||||||||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacg 37419801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 11223793 - 11223828
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||||||||||||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtc 11223828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 6180790 - 6180830
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagt 115  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  6180790 ctatgaagcacggaaactcctcagattaggtgtgtctcagt 6180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 32749754 - 32749826
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||| ||||||||||| |||| ||||||||| |||||| | |||| |||||  ||||||| |||||||    
T  32749754 ctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacg 32749826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 37411188 - 37411276
Alignment:
Q  79 gaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||| | |||||||| || |||||||||| |||||| | ||||| ||| | | ||||| |||||| |||||| |||||||||||||    
T  37411188 gaagcacaggcactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatg 37411276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 12224329 - 12224250
Alignment:
Q  88 acactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||  ||||||||||||| |||||| | |||||| || | |||||||||||||| | |||||||| || ||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatg 12224250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 18622721 - 18622633
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||||| | ||||| | |||| | |||  || ||    ||||||| |||||||||||||||||||||||||    
T  18622721 ctatgaagcacggacactcctcggattaagtgtgtcccggtgtaggacatatgaca----cgacaccaacacgtataattacactgaattatg 18622633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 21782743 - 21782798
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtc 129  Q
    ||||||||||||||||||||| |||||||| |||||| | |||| | |||||||||    
T  21782743 actatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtc 21782798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 24009414 - 24009343
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacac 146  Q
    |||||||||||||||||||||  ||| ||||||||| | ||||   ||||||||| | ||||||||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 39323357 - 39323322
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||||||||||| ||||    
T  39323357 ctatgaagcacggacactcctcagattaggcctgtc 39323322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 5367253 - 5367219
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||| ||||||||||||||||||||    
T  5367253 tccgacaccgacacatataattacactgaattatg 5367219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 3444827 - 3444868
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    ||||||||||||||||||||| |||||||| |||| ||||||    
T  3444827 tatgaagcacggacactcctcggattaggcatgtcccagtgt 3444868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 20539632 - 20539669
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctc 112  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  20539632 ctatgaagcacggacactcctcggatcaggcgtgtctc 20539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 29176456 - 29176525
Alignment:
Q  98 gattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||| |||||||||||| | ||| ||| | | ||| ||||| |||| ||||||||||||||||||||    
T  29176456 gattaggtgtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatg 29176525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 34691763 - 34691804
Alignment:
Q  69 cacacactatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  34691763 cacacattatgaaacacggacactcctcggattaggcgtgtc 34691804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 34691803 - 34691836
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattat 166  Q
    |||||||||||||| |||||||||||||||||||    
T  34691803 tccgacaccgacacatataattacactgaattat 34691836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 34714175 - 34714216
Alignment:
Q  69 cacacactatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  34714175 cacacattatgaaacacggacactcctcggattaggcgtgtc 34714216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 34714215 - 34714248
Alignment:
Q  133 tccgacaccgacacgtataattacactgaattat 166  Q
    |||||||||||||| |||||||||||||||||||    
T  34714215 tccgacaccgacacatataattacactgaattat 34714248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 42511322 - 42511375
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgt 128  Q
    |||||||||||||||||||||| |||||| |||||| | |||| | ||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgt 42511375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 168
Target Start/End: Complemental strand, 44860379 - 44860346
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatgc 168  Q
    |||||||||||| |||||||||||||||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgc 44860346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 5040845 - 5040761
Alignment:
Q  83 cacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||  || |||||||||| | | || | |||| |||| | |||||||||||||| | |||||||| |||||||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatg 5040761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 12668423 - 12668455
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  12668423 cgacaccgacacttataattacactgaattatg 12668455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 15907850 - 15907886
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  15907850 actatgaagcacggacactcatcagattgggcgtgtc 15907886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 18420363 - 18420427
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgaca 139  Q
    ||||||||||| |||||| ||| |||||||||||||  | ||| |||||| |||||| |||||||    
T  18420363 ctatgaagcacagacacttctcggattaggcgtgtcataatgtcgaacacttgtcatgtccgaca 18420427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 103
Target Start/End: Original strand, 24975255 - 24975283
Alignment:
Q  75 ctatgaagcacggacactcctcagattag 103  Q
    |||||||||||||||||||||||||||||    
T  24975255 ctatgaagcacggacactcctcagattag 24975283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 30404790 - 30404882
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||  || || |||||||||||| ||||   |||| | ||| ||||| | |||||| ||||||| | ||||||||||||||||||    
T  30404790 ctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatg 30404882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 36756344 - 36756376
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  36756344 cgacaccgacacttataattacactgaattatg 36756376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 3427 - 3338
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatt 164  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  | |||||||| | |||||||| ||||| | |||||||||| ||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatt 3338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 164
Target Start/End: Original strand, 403 - 491
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaatt 164  Q
    ||||||||||||||||||||| ||||||| ||||| | |||| | ||||| ||| | |||||||||||||| | |||||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaatt 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 4976 - 5058
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattaca 157  Q
    ||||||||||| |||||||||| |||||||| ||||||| ||| | ||||||||| | |||||||||||||| | ||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 70394 - 70305
Alignment:
Q  78 tgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    ||||||||| |||||| || |||||||| ||||   |||| | ||||||||| | |||||||||||||| ||||||||||||||||||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatg 70305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 14646 - 14557
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||  ||||||||||||||| |||| | ||||||||| | ||||||||   ||| | ||||||||||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatg 14557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 241724 - 241652
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||||||||||| ||| ||||||||||||| | |||| | ||||||||| | ||||||||| |||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacg 241652  T

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Target: scaffold0793 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 4821 - 4915
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttcc--gacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||||||||||||| ||||||||||||| | |||| | ||| ||||| | | |  |||||| |||| | ||||||||||||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatg 4915  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 263303 - 263373
Alignment:
Q  77 atgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||| |||||||||||||| ||||||||||||||  || | ||||||||||| | || ||||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacg 263373  T

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Target: scaffold0450 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 8564 - 8636
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||||||||||  |||||||||||  |||||| | |||||| || | ||||| |||||||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacg 8636  T

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Target: scaffold0136 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 3778 - 3850
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    |||||||||| ||||||||||| |||||||||||||||  ||| | ||| ||||| | ||||||||| |||||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacg 3850  T

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Target: scaffold0086 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 3058 - 2986
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||| |||||||||||||||| ||||||||||||  | |||| ||||||||||| | || || |||||||||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacg 2986  T

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Target: scaffold0083 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 45470 - 45562
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||| || |  |||||||| |||| | ||||   ||||||||| | |||||||||||||| | ||||||||||||||||||    
T  45470 ctatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatg 45562  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 46777 - 46741
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||||| |||||||||||||    
T  46777 actatgaagcacggacactcctcggattaggcgtgtc 46741  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 71855 - 71783
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||| |||||||||| |||||| |||||| | |||| | ||||||||  | |||||||||||||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacg 71783  T

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Target: scaffold0380 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 8720 - 8666
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgtggaacacgtgtc 129  Q
    |||||||||||||||||||||  |||||||||| || |||||| | |||||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtc 8666  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 24155 - 24082
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgt-gga-acacgtgtcatttccgacaccgacacg 147  Q
    ||||||||||||||||||| || ||||||||||||| |||||| ||| ||||||||  | |||||||||||||||    
T  24155 ctatgaagcacggacactcatcggattaggcgtgtc-cagtgtcggacacacgtgttgtgtccgacaccgacacg 24082  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 2978 - 3020
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtctcagtgt 117  Q
    |||||||||||||||||||| || ||||||||||| |||||||    
T  2978 ctatgaagcacggacactccccatattaggcgtgtttcagtgt 3020  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 92940 - 92906
Alignment:
Q  76 tatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||||||||||| |||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtc 92906  T

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Target: scaffold0171 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 23479 - 23447
Alignment:
Q  135 cgacaccgacacgtataattacactgaattatg 167  Q
    |||||||||||| ||||||||||||||||||||    
T  23479 cgacaccgacacttataattacactgaattatg 23447  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 21278 - 21242
Alignment:
Q  75 ctatgaagcacggacactcctcagattaggcgtgtct 111  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtct 21242  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 135262 - 135298
Alignment:
Q  74 actatgaagcacggacactcctcagattaggcgtgtc 110  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  135262 actatgaagcacgaacacgcctcagattaggcgtgtc 135298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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