View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9326_low_35 (Length: 221)

Name: NF9326_low_35
Description: NF9326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9326_low_35
NF9326_low_35
[»] chr4 (73 HSPs)
chr4 (4-221)||(38365865-38366081)
chr4 (1-185)||(7182216-7182400)
chr4 (1-185)||(41363837-41364021)
chr4 (3-185)||(38317256-38317438)
chr4 (1-187)||(904072-904253)
chr4 (1-178)||(31529898-31530075)
chr4 (1-189)||(41844310-41844491)
chr4 (1-151)||(20533833-20533983)
chr4 (5-181)||(16535567-16535743)
chr4 (7-183)||(52594656-52594831)
chr4 (1-156)||(48830839-48830995)
chr4 (1-187)||(24279784-24279970)
chr4 (1-152)||(37756738-37756889)
chr4 (4-185)||(3127039-3127219)
chr4 (1-154)||(13269856-13270009)
chr4 (1-186)||(36151395-36151575)
chr4 (1-155)||(56504494-56504647)
chr4 (8-157)||(21296137-21296286)
chr4 (9-157)||(13270308-13270454)
chr4 (1-139)||(17873114-17873252)
chr4 (1-187)||(32948541-32948728)
chr4 (1-157)||(47669708-47669866)
chr4 (1-185)||(54806347-54806526)
chr4 (4-157)||(17622499-17622645)
chr4 (6-187)||(24287378-24287560)
chr4 (1-109)||(49404648-49404756)
chr4 (4-152)||(21730354-21730500)
chr4 (1-191)||(46176952-46177142)
chr4 (80-193)||(31187198-31187311)
chr4 (1-183)||(35959072-35959252)
chr4 (55-156)||(32651342-32651443)
chr4 (57-185)||(50641929-50642055)
chr4 (66-185)||(32060561-32060680)
chr4 (1-187)||(12708859-12709045)
chr4 (1-183)||(49668129-49668310)
chr4 (1-74)||(23708129-23708202)
chr4 (8-183)||(38136866-38137041)
chr4 (1-183)||(16318491-16318673)
chr4 (3-188)||(33500389-33500573)
chr4 (7-157)||(30765602-30765757)
chr4 (109-183)||(22891420-22891494)
chr4 (109-183)||(22943084-22943158)
chr4 (8-181)||(28175496-28175669)
chr4 (1-185)||(29114258-29114443)
chr4 (1-46)||(32649029-32649074)
chr4 (109-194)||(52636624-52636709)
chr4 (1-50)||(42650643-42650692)
chr4 (7-185)||(45823427-45823605)
chr4 (4-140)||(45971479-45971613)
chr4 (146-189)||(37756533-37756576)
chr4 (5-185)||(21081217-21081402)
chr4 (117-189)||(42759779-42759852)
chr4 (2-47)||(48417626-48417671)
chr4 (3-44)||(48620310-48620351)
chr4 (108-192)||(675236-675320)
chr4 (130-182)||(18964882-18964934)
chr4 (8-184)||(30198803-30198979)
chr4 (1-181)||(55509764-55509943)
chr4 (142-185)||(21357980-21358023)
chr4 (146-185)||(31530247-31530286)
chr4 (72-187)||(32866824-32866939)
chr4 (127-185)||(31340659-31340717)
chr4 (142-188)||(32648819-32648865)
chr4 (8-50)||(42759683-42759725)
chr4 (85-182)||(8827927-8828024)
chr4 (1-42)||(15498819-15498860)
chr4 (134-187)||(27485400-27485453)
chr4 (146-187)||(41363628-41363669)
chr4 (104-189)||(41709245-41709330)
chr4 (142-183)||(43031553-43031594)
chr4 (110-155)||(45022853-45022898)
chr4 (144-188)||(7182002-7182046)
chr4 (72-144)||(53299866-53299938)
[»] chr7 (62 HSPs)
chr7 (1-188)||(33406657-33406844)
chr7 (1-185)||(3658536-3658720)
chr7 (5-188)||(34652080-34652263)
chr7 (1-152)||(23620818-23620969)
chr7 (1-162)||(3571784-3571945)
chr7 (1-181)||(47276027-47276208)
chr7 (1-190)||(5968068-5968256)
chr7 (4-185)||(7667192-7667374)
chr7 (1-154)||(28437567-28437721)
chr7 (1-187)||(33810237-33810423)
chr7 (1-185)||(36747168-36747351)
chr7 (7-187)||(33113670-33113847)
chr7 (6-156)||(46449076-46449225)
chr7 (7-152)||(19644206-19644351)
chr7 (1-138)||(42620377-42620513)
chr7 (1-153)||(41002276-41002427)
chr7 (1-185)||(43778601-43778790)
chr7 (1-181)||(44719969-44720145)
chr7 (4-170)||(46745615-46745780)
chr7 (19-157)||(43188770-43188908)
chr7 (1-185)||(38505359-38505543)
chr7 (1-189)||(15748974-15749162)
chr7 (7-88)||(19644137-19644218)
chr7 (1-189)||(16805592-16805780)
chr7 (1-185)||(6746594-6746775)
chr7 (1-194)||(43348254-43348446)
chr7 (1-178)||(43741586-43741761)
chr7 (95-156)||(23325720-23325781)
chr7 (109-189)||(30183716-30183798)
chr7 (20-181)||(34399081-34399244)
chr7 (4-50)||(2826275-2826321)
chr7 (109-155)||(42113090-42113136)
chr7 (21-139)||(42219956-42220074)
chr7 (95-188)||(7391526-7391619)
chr7 (96-185)||(30080844-30080933)
chr7 (7-139)||(38137859-38137991)
chr7 (18-77)||(43665190-43665249)
chr7 (109-188)||(6635701-6635782)
chr7 (72-162)||(19791587-19791677)
chr7 (85-182)||(22556808-22556905)
chr7 (8-152)||(23550695-23550837)
chr7 (96-171)||(23551547-23551620)
chr7 (97-189)||(32650501-32650593)
chr7 (1-188)||(42253829-42254014)
chr7 (7-171)||(43741234-43741397)
chr7 (146-185)||(28437359-28437398)
chr7 (146-188)||(5967868-5967910)
chr7 (146-188)||(33872224-33872266)
chr7 (97-139)||(42471332-42471374)
chr7 (123-185)||(42854120-42854181)
chr7 (109-187)||(44643655-44643733)
chr7 (146-187)||(7666980-7667021)
chr7 (5-42)||(31055389-31055426)
chr7 (22-139)||(31891204-31891321)
chr7 (1-50)||(32650416-32650465)
chr7 (9-50)||(33872144-33872185)
chr7 (142-187)||(38236012-38236057)
chr7 (97-189)||(2826367-2826459)
chr7 (149-189)||(4058312-4058352)
chr7 (20-68)||(7181751-7181799)
chr7 (86-185)||(12624483-12624582)
chr7 (1-41)||(22394178-22394218)
[»] chr5 (49 HSPs)
chr5 (1-187)||(35700930-35701116)
chr5 (1-162)||(38928727-38928888)
chr5 (8-156)||(41694878-41695026)
chr5 (1-156)||(2020882-2021036)
chr5 (1-181)||(27480197-27480375)
chr5 (1-156)||(4649012-4649167)
chr5 (9-156)||(1658078-1658225)
chr5 (1-157)||(32760657-32760812)
chr5 (1-187)||(10295352-10295539)
chr5 (1-156)||(17092799-17092953)
chr5 (10-186)||(41638226-41638401)
chr5 (1-156)||(26149503-26149659)
chr5 (24-156)||(38302400-38302533)
chr5 (1-147)||(25026838-25026978)
chr5 (3-187)||(37508418-37508600)
chr5 (17-187)||(38120216-38120381)
chr5 (1-187)||(5772745-5772930)
chr5 (4-132)||(35868758-35868883)
chr5 (6-189)||(35708783-35708966)
chr5 (20-187)||(35683517-35683684)
chr5 (97-184)||(35704583-35704670)
chr5 (4-188)||(43496376-43496561)
chr5 (5-119)||(6491123-6491236)
chr5 (9-118)||(25598819-25598928)
chr5 (1-185)||(10437858-10438042)
chr5 (1-171)||(12096792-12096959)
chr5 (1-50)||(38568392-38568441)
chr5 (1-185)||(39649442-39649627)
chr5 (106-162)||(1176062-1176118)
chr5 (1-141)||(10842961-10843100)
chr5 (1-68)||(9096308-9096375)
chr5 (31-181)||(15739405-15739556)
chr5 (10-121)||(32750577-32750688)
chr5 (72-130)||(6491418-6491476)
chr5 (142-187)||(1658396-1658441)
chr5 (104-185)||(18670905-18670986)
chr5 (108-171)||(41923063-41923127)
chr5 (1-46)||(1935132-1935178)
chr5 (159-189)||(7398595-7398625)
chr5 (1-188)||(9684806-9684993)
chr5 (129-187)||(12229616-12229674)
chr5 (1-50)||(10955715-10955764)
chr5 (106-147)||(15058577-15058618)
chr5 (94-143)||(26018716-26018765)
chr5 (147-188)||(39549721-39549762)
chr5 (96-140)||(1978116-1978160)
chr5 (109-185)||(6632524-6632599)
chr5 (146-194)||(10295710-10295758)
chr5 (96-156)||(39550016-39550076)
[»] chr1 (80 HSPs)
chr1 (1-185)||(27499856-27500040)
chr1 (3-188)||(12293679-12293864)
chr1 (1-158)||(33991440-33991597)
chr1 (1-188)||(47905714-47905901)
chr1 (1-185)||(1688242-1688420)
chr1 (1-156)||(23871488-23871643)
chr1 (1-186)||(26757180-26757361)
chr1 (1-171)||(39889683-39889853)
chr1 (8-185)||(51246595-51246772)
chr1 (1-151)||(13255250-13255400)
chr1 (4-187)||(17688213-17688393)
chr1 (1-185)||(38794842-38795026)
chr1 (1-182)||(7401551-7401733)
chr1 (4-187)||(1523463-1523648)
chr1 (17-188)||(40707237-40707410)
chr1 (9-157)||(30538782-30538930)
chr1 (1-189)||(42488652-42488835)
chr1 (17-189)||(43571993-43572164)
chr1 (1-188)||(896520-896702)
chr1 (18-152)||(2925976-2926110)
chr1 (4-185)||(13061424-13061609)
chr1 (17-188)||(26940475-26940646)
chr1 (4-188)||(50247464-50247648)
chr1 (5-171)||(11017485-11017651)
chr1 (1-156)||(42162078-42162233)
chr1 (1-157)||(15463719-15463876)
chr1 (4-192)||(45564994-45565182)
chr1 (3-185)||(8156365-8156543)
chr1 (17-154)||(938279-938417)
chr1 (57-157)||(32295544-32295644)
chr1 (1-156)||(39508669-39508826)
chr1 (9-157)||(50476446-50476586)
chr1 (5-162)||(2175222-2175381)
chr1 (1-89)||(7963942-7964030)
chr1 (4-88)||(47206451-47206535)
chr1 (1-188)||(17556537-17556723)
chr1 (1-185)||(36886742-36886925)
chr1 (1-185)||(36269615-36269799)
chr1 (40-139)||(17675116-17675215)
chr1 (1-187)||(52073473-52073659)
chr1 (7-79)||(14153090-14153161)
chr1 (1-185)||(29091959-29092142)
chr1 (74-157)||(14152600-14152683)
chr1 (10-185)||(49102986-49103160)
chr1 (1-189)||(27255077-27255265)
chr1 (17-157)||(28773419-28773560)
chr1 (123-187)||(39179253-39179317)
chr1 (5-140)||(5584422-5584557)
chr1 (96-185)||(50586920-50587009)
chr1 (56-139)||(34918811-34918894)
chr1 (20-183)||(28748079-28748237)
chr1 (1-171)||(52068162-52068335)
chr1 (1-185)||(34154353-34154537)
chr1 (1-156)||(7915414-7915569)
chr1 (1-187)||(17760500-17760687)
chr1 (96-182)||(28718911-28718998)
chr1 (7-50)||(28848820-28848863)
chr1 (1-68)||(30543378-30543445)
chr1 (3-65)||(32299086-32299148)
chr1 (1-50)||(2909125-2909174)
chr1 (1-153)||(46001471-46001622)
chr1 (1-189)||(41432791-41432984)
chr1 (142-188)||(9595781-9595827)
chr1 (142-188)||(45565349-45565395)
chr1 (142-187)||(13061212-13061257)
chr1 (21-139)||(27102869-27102987)
chr1 (5-49)||(41817328-41817372)
chr1 (8-47)||(34750037-34750076)
chr1 (9-187)||(37649649-37649827)
chr1 (72-158)||(5970526-5970612)
chr1 (1-43)||(15426287-15426329)
chr1 (146-188)||(32299327-32299369)
chr1 (146-188)||(32300279-32300321)
chr1 (86-156)||(36944791-36944861)
chr1 (54-152)||(50402671-50402768)
chr1 (111-187)||(25708500-25708576)
chr1 (109-190)||(38795462-38795543)
chr1 (4-112)||(41428022-41428129)
chr1 (142-191)||(50247816-50247865)
chr1 (1-50)||(51303201-51303250)
[»] chr8 (46 HSPs)
chr8 (1-188)||(25033249-25033436)
chr8 (1-184)||(6691-6875)
chr8 (1-157)||(36906087-36906243)
chr8 (1-192)||(34272379-34272571)
chr8 (4-181)||(37659559-37659736)
chr8 (1-188)||(3404599-3404785)
chr8 (1-181)||(36102915-36103095)
chr8 (5-157)||(34304616-34304767)
chr8 (1-156)||(13865117-13865271)
chr8 (1-156)||(29611893-29612047)
chr8 (1-157)||(4734521-4734677)
chr8 (1-156)||(31297373-31297527)
chr8 (4-157)||(2474794-2474947)
chr8 (67-188)||(1942124-1942244)
chr8 (9-184)||(43733153-43733328)
chr8 (1-187)||(21173883-21174068)
chr8 (7-186)||(79644-79824)
chr8 (1-187)||(34349593-34349771)
chr8 (1-152)||(39193836-39193987)
chr8 (1-75)||(40985099-40985173)
chr8 (1-185)||(23932583-23932766)
chr8 (1-188)||(1839845-1840031)
chr8 (1-185)||(26772667-26772850)
chr8 (55-189)||(40999247-40999380)
chr8 (1-42)||(1942078-1942119)
chr8 (29-157)||(35376681-35376809)
chr8 (14-140)||(28169794-28169920)
chr8 (142-188)||(34148395-34148441)
chr8 (109-182)||(31149799-31149872)
chr8 (112-156)||(1840341-1840385)
chr8 (111-183)||(3635611-3635683)
chr8 (146-186)||(4074854-4074894)
chr8 (104-192)||(14581875-14581963)
chr8 (4-76)||(34148595-34148665)
chr8 (96-182)||(4166762-4166849)
chr8 (16-139)||(6839823-6839945)
chr8 (139-185)||(13864910-13864956)
chr8 (146-192)||(36906413-36906459)
chr8 (20-66)||(37388264-37388309)
chr8 (146-188)||(37659348-37659390)
chr8 (77-181)||(6943534-6943638)
chr8 (109-185)||(8228406-8228482)
chr8 (148-188)||(13227941-13227981)
chr8 (132-192)||(21262731-21262791)
chr8 (104-180)||(36837601-36837677)
chr8 (7-47)||(39418065-39418105)
[»] chr3 (76 HSPs)
chr3 (1-188)||(47789471-47789658)
chr3 (1-185)||(30131911-30132094)
chr3 (1-156)||(24242117-24242272)
chr3 (1-156)||(36796324-36796479)
chr3 (1-156)||(43237192-43237346)
chr3 (1-166)||(47714698-47714862)
chr3 (1-156)||(41962002-41962155)
chr3 (1-189)||(38526026-38526209)
chr3 (1-156)||(3043143-3043298)
chr3 (1-171)||(49860722-49860892)
chr3 (9-157)||(46312454-46312602)
chr3 (1-156)||(49683027-49683181)
chr3 (1-187)||(39499065-39499254)
chr3 (3-185)||(45555509-45555687)
chr3 (1-156)||(55439485-55439640)
chr3 (10-156)||(33982753-33982899)
chr3 (4-157)||(31178274-31178427)
chr3 (7-166)||(17642481-17642639)
chr3 (1-138)||(23163443-23163579)
chr3 (1-157)||(44412180-44412336)
chr3 (17-156)||(38515152-38515290)
chr3 (39-188)||(34306016-34306165)
chr3 (27-156)||(43007547-43007676)
chr3 (1-185)||(2420537-2420725)
chr3 (1-156)||(25428571-25428724)
chr3 (8-188)||(47434351-47434525)
chr3 (4-189)||(3537076-3537261)
chr3 (14-185)||(46017100-46017269)
chr3 (1-185)||(32858701-32858886)
chr3 (1-185)||(29623108-29623292)
chr3 (1-186)||(35282960-35283143)
chr3 (1-187)||(1132950-1133137)
chr3 (69-185)||(42583364-42583475)
chr3 (17-157)||(42583325-42583452)
chr3 (109-185)||(53620161-53620237)
chr3 (72-186)||(3706976-3707091)
chr3 (1-68)||(24588308-24588375)
chr3 (1-140)||(33944665-33944803)
chr3 (96-187)||(49183562-49183653)
chr3 (6-83)||(48370210-48370286)
chr3 (1-140)||(33908974-33909112)
chr3 (1-187)||(48908899-48909084)
chr3 (9-140)||(53664632-53664763)
chr3 (9-156)||(50948106-50948254)
chr3 (1-42)||(34306623-34306664)
chr3 (1-50)||(52620850-52620899)
chr3 (1-46)||(53888498-53888543)
chr3 (1-185)||(517657-517838)
chr3 (7-67)||(11040859-11040919)
chr3 (20-139)||(22225285-22225403)
chr3 (5-140)||(5939810-5939945)
chr3 (1-68)||(15499324-15499391)
chr3 (97-140)||(30995788-30995831)
chr3 (7-88)||(38592926-38593003)
chr3 (1-50)||(25754127-25754176)
chr3 (143-188)||(38515458-38515503)
chr3 (1-50)||(38639596-38639645)
chr3 (100-180)||(18257796-18257876)
chr3 (1-189)||(49855833-49856015)
chr3 (9-76)||(42155986-42156053)
chr3 (3-50)||(45570970-45571017)
chr3 (109-183)||(46672363-46672438)
chr3 (146-188)||(30121337-30121379)
chr3 (14-83)||(39966895-39966965)
chr3 (127-185)||(54126155-54126213)
chr3 (96-141)||(16883215-16883260)
chr3 (159-188)||(23163750-23163779)
chr3 (146-187)||(44411970-44412011)
chr3 (146-187)||(49861060-49861101)
chr3 (1-42)||(51686521-51686562)
chr3 (94-138)||(21494960-21495004)
chr3 (1-49)||(27681816-27681864)
chr3 (154-194)||(32720899-32720939)
chr3 (7-47)||(41677488-41677528)
chr3 (85-185)||(51684496-51684596)
chr3 (112-188)||(52620951-52621027)
[»] chr2 (67 HSPs)
chr2 (1-185)||(12963996-12964181)
chr2 (1-192)||(8990988-8991177)
chr2 (1-182)||(18018622-18018802)
chr2 (6-185)||(3038976-3039157)
chr2 (1-188)||(18780251-18780440)
chr2 (1-187)||(30312430-30312611)
chr2 (1-154)||(8555801-8555954)
chr2 (4-166)||(1725800-1725963)
chr2 (1-156)||(4041865-4042020)
chr2 (5-187)||(10165285-10165467)
chr2 (4-157)||(32243375-32243528)
chr2 (8-187)||(25960642-25960821)
chr2 (1-156)||(36567303-36567457)
chr2 (1-156)||(18826251-18826412)
chr2 (4-185)||(14008356-14008537)
chr2 (1-185)||(8410955-8411135)
chr2 (17-185)||(31550290-31550458)
chr2 (1-156)||(38023472-38023625)
chr2 (9-190)||(38293756-38293936)
chr2 (2-157)||(725855-726011)
chr2 (1-137)||(19382798-19382933)
chr2 (1-156)||(13765964-13766118)
chr2 (1-188)||(44137026-44137191)
chr2 (4-185)||(3119880-3120059)
chr2 (1-187)||(40357337-40357513)
chr2 (10-185)||(4003300-4003475)
chr2 (27-156)||(18561909-18562039)
chr2 (1-185)||(11514916-11515100)
chr2 (18-156)||(44020253-44020393)
chr2 (18-131)||(6711871-6711987)
chr2 (1-188)||(16519114-16519300)
chr2 (16-101)||(31899383-31899468)
chr2 (1-187)||(13018503-13018689)
chr2 (85-183)||(16625890-16625988)
chr2 (20-181)||(15555390-15555550)
chr2 (1-140)||(1364750-1364889)
chr2 (1-156)||(5322144-5322298)
chr2 (1-185)||(6655990-6656176)
chr2 (96-183)||(11522286-11522373)
chr2 (8-65)||(43334799-43334856)
chr2 (1-185)||(40211876-40212059)
chr2 (1-169)||(34757493-34757661)
chr2 (1-140)||(31082733-31082871)
chr2 (1-185)||(43572569-43572757)
chr2 (72-188)||(32761370-32761486)
chr2 (14-157)||(36030714-36030856)
chr2 (1-50)||(26599274-26599323)
chr2 (1-50)||(26905811-26905860)
chr2 (1-181)||(37194142-37194323)
chr2 (72-156)||(43333446-43333531)
chr2 (6-180)||(21834815-21834992)
chr2 (1-80)||(13767406-13767484)
chr2 (95-182)||(39180955-39181041)
chr2 (8-194)||(21625987-21626172)
chr2 (5-121)||(14363544-14363658)
chr2 (84-140)||(30072516-30072572)
chr2 (10-50)||(36870270-36870310)
chr2 (149-188)||(11950227-11950266)
chr2 (1-183)||(15803065-15803244)
chr2 (142-185)||(40357677-40357720)
chr2 (146-188)||(1726120-1726162)
chr2 (9-156)||(9618369-9618514)
chr2 (1-42)||(11522205-11522246)
chr2 (115-188)||(39750027-39750100)
chr2 (1-68)||(42644646-42644710)
chr2 (4-68)||(30523236-30523299)
chr2 (20-68)||(37664567-37664615)
[»] chr6 (31 HSPs)
chr6 (1-182)||(26574420-26574596)
chr6 (1-156)||(29241858-29242013)
chr6 (1-156)||(4909940-4910094)
chr6 (1-152)||(1029198-1029349)
chr6 (1-157)||(24734782-24734936)
chr6 (4-156)||(5825234-5825385)
chr6 (1-185)||(34914499-34914683)
chr6 (6-181)||(26481161-26481332)
chr6 (5-185)||(31345399-31345579)
chr6 (1-187)||(26713733-26713919)
chr6 (5-139)||(14275904-14276037)
chr6 (1-101)||(23095153-23095253)
chr6 (1-189)||(1567149-1567337)
chr6 (100-185)||(2365721-2365806)
chr6 (1-183)||(32719401-32719582)
chr6 (1-140)||(24874960-24875096)
chr6 (96-185)||(33590447-33590536)
chr6 (7-187)||(12779387-12779564)
chr6 (92-144)||(15615580-15615632)
chr6 (109-185)||(33212204-33212280)
chr6 (96-139)||(28552005-28552048)
chr6 (89-139)||(4027122-4027172)
chr6 (7-68)||(13380529-13380591)
chr6 (142-188)||(24735102-24735148)
chr6 (140-185)||(29241651-29241696)
chr6 (1-50)||(33755056-33755105)
chr6 (1-41)||(6688061-6688101)
chr6 (18-74)||(8439412-8439468)
chr6 (116-156)||(23095253-23095293)
chr6 (154-194)||(25073428-25073468)
chr6 (140-188)||(31345184-31345232)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-189)||(35480-35667)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-166)||(29-196)
scaffold1562 (146-182)||(364-400)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-166)||(2397-2564)
scaffold1158 (146-182)||(2193-2229)
[»] scaffold0636 (1 HSPs)
scaffold0636 (5-152)||(8306-8453)
[»] scaffold0952 (1 HSPs)
scaffold0952 (19-156)||(3714-3852)
[»] scaffold0136 (1 HSPs)
scaffold0136 (5-188)||(2052-2234)
[»] scaffold0717 (3 HSPs)
scaffold0717 (1-88)||(1548-1634)
scaffold0717 (128-187)||(1481-1540)
scaffold0717 (146-185)||(1803-1842)
[»] scaffold0013 (1 HSPs)
scaffold0013 (58-157)||(107761-107859)
[»] scaffold1163 (1 HSPs)
scaffold1163 (85-184)||(1931-2030)
[»] scaffold0059 (2 HSPs)
scaffold0059 (58-157)||(75903-76001)
scaffold0059 (58-157)||(67798-67896)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-140)||(29162-29300)
[»] scaffold0248 (1 HSPs)
scaffold0248 (1-183)||(221-403)
[»] scaffold0051 (2 HSPs)
scaffold0051 (1-185)||(6782-6967)
scaffold0051 (1-185)||(7765-7950)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-185)||(82667-82852)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-185)||(26251-26436)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-50)||(93531-93580)
[»] scaffold0026 (2 HSPs)
scaffold0026 (3-68)||(74717-74782)
scaffold0026 (112-187)||(82846-82922)
[»] scaffold0274 (1 HSPs)
scaffold0274 (4-139)||(15836-15970)


Alignment Details
Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 38366081 - 38365865
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||  ||||||| ||||    
T  38366081 cccccaaaaccctcccccaatacaatttttgagttcccc-aaatgagagggattttttattatgagtaaaaaattaacctccaaagtcctctccttccaa 38365983  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaaattgcattcctt 203  Q
    | |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||| ||||||||    
T  38365982 tgtcttctatttcttccacttgctccttccttttttctaaaactctcccctcccctcccctccaaactcccaaacaaagccttagaaaattacattcctt 38365883  T
Q  204 acccaattaaatttgact 221  Q
    ||||||||||||||||||    
T  38365882 acccaattaaatttgact 38365865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 7182216 - 7182400
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||| |||||||||||||||     
T  7182216 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaagattaacctccaaagctctctcctct 7182315  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||||    
T  7182316 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagcct 7182400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 41363837 - 41364021
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  41363837 aaccccccaaaaccctcccccaatacaatttttgagttcccccacatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 41363936  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||| | ||||||| |||||||||||||  ||||||||||||    
T  41363937 caatgtcttctatttcttccacttgctccttccttttttccaaaaccgttccctcccctcccctccaaactcccaaacaaagcct 41364021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 38317256 - 38317438
Alignment:
Q  3 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctccca 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||||| |||||||||||    
T  38317256 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctccaaagccctctcctccca 38317355  T
Q  103 atttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||||||||||||||| |||||||||||||||||| ||||||||| |||||| |||||||| ||||  ||||||||||||    
T  38317356 atgtcttctatttcttccacttgctccttccttttttccaaaaccctctcctcccctcccctcccaactcccaaacaaagcct 38317438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 904253 - 904072
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  904253 aaccccccaaaaccctccctcaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 904154  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
     ||| |||||||||||||||| |||||||||| ||||||||||||||||||||     |||||||||||||  ||||||||||||||    
T  904153 gaatgtcttctatttcttccacttgctccttctttttttctaaaaccctcccc-----tcccctccaaactcccaaacaaagcctta 904072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 31530075 - 31529898
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||| | |||||||||    
T  31530075 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctccaaaaccctctcctcc 31529976  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaac 178  Q
    | || |||||||||||||||| ||||||||||||||| || |||||| ||||||||  ||||||||||||| ||||||    
T  31529975 cgatgtcttctatttcttccacttgctccttccttttctccaaaaccttcccctcctctcccctccaaactctcaaac 31529898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 41844491 - 41844310
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  41844491 aaccccccaaaaccctcccctaatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaagccctctcctcc 41844392  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    |||| |||||||||||||  |  ||||||||||||||||| ||||||||||||     |||||||||||||  ||||||||||||||||    
T  41844391 caatgtcttctatttctt--aaatgctccttccttttttccaaaaccctcccc-----tcccctccaaactcccaaacaaagccttaga 41844310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 20533983 - 20533833
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||   ||||||||    
T  20533983 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaagtcttctcctcc 20533884  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcc 151  Q
    |||| |||||||||||||||| || ||||||||||||||| ||||||||||    
T  20533883 caatgtcttctatttcttccacttactccttccttttttccaaaaccctcc 20533833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 181
Target Start/End: Complemental strand, 16535743 - 16535567
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  16535743 ccccaagacccttccccaatacaattttttagttcccccaaatgagggatattttttattatgagtaaaaaattaacctccaaagccctctcctcccaat 16535644  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
     |||||||||||||||| ||||||||||||||||||  ||||||||||||||  ||||||| |||||  ||||||||    
T  16535643 gtcttctatttcttccacttgctccttccttttttcccaaaccctcccctcctctcccctctaaactcccaaacaaa 16535567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 7 - 183
Target Start/End: Original strand, 52594656 - 52594831
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaattt 106  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| ||||| |    
T  52594656 ccaaaaccctcccc-aatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctccaaaaccctctccttccaatgt 52594754  T
Q  107 cttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    ||||||||||||| | || |||||| |||||||| |||||||||||||||| | |||||||||||  ||||||||||    
T  52594755 cttctatttcttcaacttactcctttcttttttccaaaaccctcccctccccttccctccaaactcccaaacaaagc 52594831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 48830839 - 48830995
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagatttttt-attatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| ||  |||||||||||||||||| |||||| ||||||||    
T  48830839 aaccccccaaaaccctcccccaatacaatttttgagttctcccaaatgagggaggtttttttatcttgagtaaaaaattaacctccaaagccctctcctc 48830938  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  48830939 ccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 48830995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 24279970 - 24279784
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||  |  ||||||||||||||||||||||||||| | |||||| |||||||||    
T  24279970 aaccccccaaaaccctcccccaatacaatttttgagtttcgccaaatgaagggaattttttattatgagtaaaaaattaacttccaaagccctctcctcc 24279871  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||| |||| |||| |||||| |||||||||||||||||| |||||||||| ||||| ||||||| |||||  ||| ||||||||||    
T  24279870 caatgtcttttattccttccacttgctccttccttttttccaaaaccctccactcccttcccctctaaactcccaatcaaagcctta 24279784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 37756738 - 37756889
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||| ||| ||||||||| |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  37756738 aacctcccgaaaccctcctccaacacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 37756837  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctccc 152  Q
    |||| |||||||||||||||| |||||||||||||||||| |||| ||||||    
T  37756838 caatgtcttctatttcttccacttgctccttccttttttccaaaatcctccc 37756889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 3127039 - 3127219
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaa-aattaaccttcaaagctctctcctccca 102  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||||| ||| | || ||    
T  3127039 ccccgaaaaccctcctccaatacaatttttgagttcccccaaatgagag-gattttttgttatgagtaaaaaaattaacctccaaagccctcacttctca 3127137  T
Q  103 atttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || ||||||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||||||||||    
T  3127138 atgtcttctatttctttcatttgctccttccttttttccaaaatcctcccctcccctcccctccaaac-tccaaacaaagcct 3127219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13270009 - 13269856
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||  |||||||||||||||||||| ||||| ||     
T  13270009 aaccccccaaaaccctcccacaatacaatttttgagttctcccaaatgagggagattttttattatgaagaaaaaattaaccttcaaagccctctcttca 13269910  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccct 154  Q
    | || |||||||||||||||| |||||||||||||||| | |||||||||||||    
T  13269909 cgatgtcttctatttcttccacttgctccttcctttttcccaaaaccctcccct 13269856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 36151395 - 36151575
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |  | |||||||||||||||||||||||||||||| |||||| ||| |||||    
T  36151395 aaccccccaaaatcctcccccaatacaatttttgagttcccccaaattaaggggattttttattatgagtaaaaaattaacctccaaagccctcccctcc 36151494  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctt 186  Q
    ||||  |||||||||||||   ||||| |||||||||||| ||||||||||||     ||||||||||||| ||||||||||||||    
T  36151495 caatggcttctatttcttctggttgcttcttccttttttccaaaaccctcccc-----tcccctccaaactctcaaacaaagcctt 36151575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 56504494 - 56504647
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||| |||||| |||||||||    
T  56504494 aacctcccaaaaccctcccc-aatacaatttttgagttcccccaaatgagggagattttgtattatgtataaaaaattaacctccaaagccctctcctcc 56504592  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctc 155  Q
    |||| ||||||||||||| || |||||||||||| ||||  ||||||||||||||    
T  56504593 caatgtcttctatttcttgcacttgctccttcctatttttcaaaaccctcccctc 56504647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 21296137 - 21296286
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttc 107  Q
    |||||||||||||||||||||||||||||||| ||||||| || | |||||||||||||||||||||||||||||| |||||  || |||||||||| ||    
T  21296137 caaaaccctcccccaatacaatttttgagttctcccaaataagggggattttttattatgagtaaaaaattaacctacaaagtcctttcctcccaatgtc 21296236  T
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    |||||||||||||| || |||||||| |||||| ||||||||||| ||||    
T  21296237 ttctatttcttccacttactccttccctttttccaaaaccctcccttccc 21296286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 13270308 - 13270454
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttct 108  Q
    |||||||||||| |||||||||||||| |||||| ||||||| | |||||||||| ||||||||||||||||||| |||||| |||| |||||||| |||    
T  13270308 aaaaccctcccc-aatacaatttttgaattcccc-aaatgagggggattttttatcatgagtaaaaaattaacctccaaagccctctactcccaatgtct 13270405  T
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  13270406 tctatttcttccacttgctccttccttttttccaaaaccctcccctccc 13270454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 17873252 - 17873114
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaa-attaaccttcaaagctctctcctc 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| || | |||||||||||||||||||||| |||||||| |||||| ||||||||    
T  17873252 aaccccccaaaaccctcccc-aatacaatttttgagttcccccaaataagggggattttttattatgagtaaaaagattaacctccaaagccctctcctc 17873154  T
Q  100 ccaatttcttctatttcttccatttgctccttcctttttt 139  Q
    ||||| |||||||||||||||| ||||||||| |||||||    
T  17873153 ccaatgtcttctatttcttccacttgctcctttctttttt 17873114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 32948541 - 32948728
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagatttt-ttattatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    ||||| ||| ||| ||| ||||||||||||||||||||||| |||||||  | |||||| ||||||||||||||| ||||||| ||||| | |||||||     
T  32948541 aaccctccataactctcgcccaatacaatttttgagttccctcaaatgaaggggatttttttattatgagtaaaagattaaccatcaaaaccctctcctt 32948640  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||||| ||||||||||||| || ||||||||||||||||||  ||||||||||||||| |||| ||||||||  ||||||||||||||    
T  32948641 ccaatgtcttctatttctttcacttgctccttccttttttccgaaaccctcccctcccctcccttccaaactcccaaacaaagcctta 32948728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 47669866 - 47669708
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgag--taaaaaattaaccttcaaagctctctcct 98  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||   |||||||||||||  ||||| |||||||    
T  47669866 aaccctccaaaactctcccccaatacaatttttgagttcctccaaatgagggaggttttttattatgaggaaaaaaaattaacctcaaaagccctctcct 47669767  T
Q  99 cccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    |||||| |||||||||| ||||| ||||||||| |||||||  ||||||||||||||||    
T  47669766 cccaatatcttctattttttccacttgctcctttctttttttcaaaaccctcccctccc 47669708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 54806526 - 54806347
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||| | ||||    || | ||||||||||| |||||||||||| |||||||||    
T  54806526 aaccccccaaaaccctcccccaatataatttttgagttcccc-aaatgagggggatt----atcacgagtaaaaaatgaaccttcaaagccctctcctcc 54806432  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||| |||| |||||| ||||||| || ||||||| |||||||||||||||| ||| |||||||||  ||||||||||||    
T  54806431 caatgtcttttattccttccacttgctccatcattttttccaaaaccctcccctcccttcctctccaaactcccaaacaaagcct 54806347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 17622499 - 17622645
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||        || ||    
T  17622499 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagaggctttttattatgagtaaaaaattaacctccaaagc--------cctaa 17622590  T
Q  104 tttcttctatttcttccatttgctccttc-cttttttctaaaaccctcccctccc 157  Q
    | |||||||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  17622591 tgtcttctatttcttccacttgctccttcttttttttccaaaaccctcccctccc 17622645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 187
Target Start/End: Complemental strand, 24287560 - 24287378
Alignment:
Q  6 cccaaaaccctccccc-aatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    |||||||||||||||| |||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||| |  ||||||||||| |||||||    
T  24287560 cccaaaaccctccccccaatacaatttttgagttctcccaaataagggaaattttttattatgagtaaaaaattaacatcgaaagctctctcttcccaat 24287461  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
     |||| |||| |||||| ||||||||| |||||||  |||| |||||||| |  || ||||||||||  ||| ||||||||||    
T  24287460 atcttttattccttccacttgctcctttctttttttcaaaatcctccccttcattctcctccaaactcccaatcaaagcctta 24287378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 49404648 - 49404756
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  49404648 aacctcccaaaacccttccccaatacaaattttgagttcccccaaatgagagaaattttttattatgagtaaaaaattaacctccaaagctctctcctcc 49404747  T
Q  101 caatttctt 109  Q
     ||| ||||    
T  49404748 aaatgtctt 49404756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 21730354 - 21730500
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||||||||| |||  ||||||||||||||||||| || ||||||| || |||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  21730354 cccccaaaacc-tccttcaatacaatttttgagttctcc-aaatgagtgaaattttttattataagtaaaaaattaaccttcaaagttctctcctctcaa 21730451  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctccc 152  Q
    | ||||||||||||| || |||||||||  ||||||| |||||||||||    
T  21730452 tatcttctatttctttcacttgctcctttattttttccaaaaccctccc 21730500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 46176952 - 46177142
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| ||||||||| |||| |||||| |||||||||   | |||| |||||| |  ||||| | | ||  |||| | ||| |||||    
T  46176952 aaccccccaaaaccctcctccaatacaactttttagttcctccaaatgaggagggttttgtattattaagaaaaattaaccccccaaaaccctcccctcc 46177051  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaa 191  Q
    |||| |  ||||||||||||| ||| |||||| ||||||| |||||||||||||||| | |||||||||||  ||||||||||||||||||    
T  46177052 caatgtactctatttcttccacttgttccttctttttttccaaaaccctcccctccctttccctccaaactcacaaacaaagccttagaaa 46177142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 31187198 - 31187311
Alignment:
Q  80 accttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaaca 179  Q
    |||| |||||| ||||||||| ||| ||||  |||||||||| ||||| |||||||||||| |||||| ||||||||| |||||||||||||  ||||||    
T  31187198 acctccaaagccctctcctcctaatgtctttaatttcttccagttgcttcttccttttttccaaaaccatcccctcccgtcccctccaaactcccaaaca 31187297  T
Q  180 aagccttagaaaat 193  Q
    ||||||||||||||    
T  31187298 aagccttagaaaat 31187311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 35959252 - 35959072
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||| |||| ||||||||| |||| ||||||||||||||||   | |||| ||||||||  ||||| | ||||  |||||| ||| ||||     
T  35959252 aaccccccaaaacgctcctccaatacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaattaaacccccaaagccctcccctca 35959153  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    |||| |  ||||||||||||| |||||||||||| ||| |  ||| ||||||||||| |||||||||||||  ||||||||||    
T  35959152 caatgtactctatttcttccacttgctccttcctctttcc--aaaacctcccctcccttcccctccaaactcgcaaacaaagc 35959072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 32651342 - 32651443
Alignment:
Q  55 attttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccct 154  Q
    ||||||||| |||||||||| |||||||| |||||| ||||||||||||  ||||||| |||||||| || ||||||| ||||||| |||||||||||||    
T  32651342 attttttatcatgagtaaaagattaacctccaaagccctctcctcccaacgtcttctaattcttccacttactccttctttttttccaaaaccctcccct 32651441  T
Q  155 cc 156  Q
    ||    
T  32651442 cc 32651443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 50642055 - 50641929
Alignment:
Q  57 tttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    ||||||||||||||||||||||||||| || | | ||||||| ||||| |||||||||||||||| |||||| |||   ||||| ||||| |||||||||    
T  50642055 tttttattatgagtaaaaaattaacctccacatccctctccttccaatgtcttctatttcttccacttgctctttc--attttccaaaactctcccctcc 50641958  T
Q  157 catcccctccaaactttcaaacaaagcct 185  Q
    | ||| |||||||||  ||||||||||||    
T  50641957 cctcctctccaaactcccaaacaaagcct 50641929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 32060680 - 32060561
Alignment:
Q  66 tgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctc 165  Q
    ||||||||||| |||||| |||||| ||||||||||||| |||||||||| ||| | || ||||||||||||||  ||||| ||||| || | |||||||    
T  32060680 tgagtaaaaaactaacctccaaagccctctcctcccaatgtcttctatttattctacttactccttcctttttttcaaaactctcccatctcctcccctc 32060581  T
Q  166 caaactttcaaacaaagcct 185  Q
    ||||||  ||||||||||||    
T  32060580 caaactcccaaacaaagcct 32060561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 12708859 - 12709045
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  |||||| |||  ||||    
T  12708859 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcc 12708958  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    || |||| ||||||||||||| || ||  ||| |||||||  || || |||||||| ||||||||||||||  ||||||||||||||    
T  12708959 cattttcctctatttcttccacttacttattctttttttcccaagccttcccctccaatcccctccaaactcgcaaacaaagcctta 12709045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 49668129 - 49668310
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||||||||||| |||||||  |||||||   | |||  ||||||||  ||||  ||||||| ||||||  |  |||||    
T  49668129 aaccccccaaaaccctcctccaatacaattttttagttcccttaaatgaggagggtttaatattatgaagaaaag-ttaacctccaaagccgtaccctcc 49668227  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    || |||  ||||||||||||| |||||| |||||||||||| ||||| ||||||| | ||| |||||||||  ||||||||||    
T  49668228 catttttctctatttcttccacttgctcattccttttttctcaaaccttcccctcacttcctctccaaactcgcaaacaaagc 49668310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23708202 - 23708129
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaa 74  Q
    ||||| ||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  23708202 aaccctccataatcctcccccaatacaatttttgagttcccccaaataagtgagattttttattatgagtaaaa 23708129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 183
Target Start/End: Original strand, 38136866 - 38137041
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttc-aaagctctctcctcccaattt 106  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||  | |||| ||||||||  ||||| ||||||  | ||||| |||  || ||| |||    
T  38136866 caaaaccctcctccaatacaattttttagttcctccaaatgagaagggttttgtattatgaa-aaaaagttaaccccccaaagccctcctcttccatttt 38136964  T
Q  107 cttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    | ||||||||||||| || ||  |||||||||||| || || ||||||||| |||||||||||||  ||||||||||    
T  38136965 cctctatttcttccacttacttattccttttttctcaagccttcccctcccttcccctccaaactcgcaaacaaagc 38137041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 16318673 - 16318491
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| ||| |||||| |||||||||||||| |||||| |||||||||   | |||| || |||||  ||||  | | || | ||||| |||  ||||    
T  16318673 aacccccaaaatccctcctccaatacaattttttagttcctccaaatgaggagggttttgtaatatgaagaaaagttaacccctgaaagccctcctctcc 16318574  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    || |||||||||||||||||| |||||| |||||||||||  || || ||||||||| ||||||| |||||  ||||||||||    
T  16318573 cattttcttctatttcttccacttgctcattccttttttcctaagccttcccctcccttcccctcaaaactcgcaaacaaagc 16318491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 33500573 - 33500389
Alignment:
Q  3 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaac-cttcaaagctctctcctccc 101  Q
    |||||||||||||||||| |||||| ||||| |||||| |||||||||   | |||| | ||||||   |||  ||||| | ||||||| |||  |||||    
T  33500573 ccccccaaaaccctcccc-aatacatttttttagttcctccaaatgaggagggttttgtcttatgaaggaaag-ttaactcctcaaagccctcctctccc 33500476  T
Q  102 aatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    | |||| ||||||||||||| |||||| |||||||||||| || || ||||||||| |||| ||||||||  |||||||||||||||    
T  33500475 attttcctctatttcttccacttgctcattccttttttctcaagccttcccctcccttcccttccaaactcgcaaacaaagccttag 33500389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 157
Target Start/End: Complemental strand, 30765757 - 30765602
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagag------attttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||| ||||||| |||| || ||||||||||||| ||||||||| |      ||||| ||| |||| ||||||||||||| |||||    |||| ||     
T  30765757 ccaaaatcctcccctaatataaattttgagttcccc-aaatgagagggccggggattttgtatcatgaataaaaaattaaccctcaaaatcatctcatct 30765659  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    |||| | |||||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  30765658 caatgttttctatttcttccacttgctccttccttttttctaaaactctctcctccc 30765602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 183
Target Start/End: Original strand, 22891420 - 22891494
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    ||||||||||| | ||| |||||||||||||||||||| || | ||||||||||||| |||||| ||||||||||    
T  22891420 tctatttcttctacttgttccttccttttttctaaaacacttcactcccatcccctcaaaacttgcaaacaaagc 22891494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 183
Target Start/End: Original strand, 22943084 - 22943158
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    ||||||||||| | ||| |||||||||||||||||||| || | ||||||||||||| |||||| ||||||||||    
T  22943084 tctatttcttctacttgttccttccttttttctaaaacacttcactcccatcccctcaaaacttgcaaacaaagc 22943158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 28175496 - 28175669
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacct-tcaaagctctctcctcccaattt 106  Q
    ||||||||||| || ||||||||||| |||||| |||||||||   |||||| ||||||||   |||| |||||||  |||||| |||  |||||| |||    
T  28175496 caaaaccctcctcctatacaattttttagttcctccaaatgaggaggattttgtattatga-agaaaagttaacctcccaaagccctcctctcccatttt 28175594  T
Q  107 cttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
    | ||||||||||||| || ||  |||||||||||  || || ||||||||| ||| |||||||||  ||||||||    
T  28175595 cctctatttcttccacttacttattccttttttcccaagccttcccctcccttcctctccaaactcgcaaacaaa 28175669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 29114258 - 29114443
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| |||||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  |||||| |||  ||||    
T  29114258 aaccctccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcc 29114357  T
Q  101 caatttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||| ||||||||||||| || ||  |||| |||||||  || || ||||||||| |||| ||||||||  ||||||||||||    
T  29114358 cattttcctctatttcttccacttacttattcctttttttcccaagccttcccctcccttcccttccaaactcgcaaacaaagcct 29114443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32649029 - 32649074
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaa 46  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32649029 aaccccccaaaaccctcccccaatacaatttttgaattcccccaaa 32649074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 52636709 - 52636624
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaaatt 194  Q
    ||||||||||||| ||||||  |||||||||| ||||  ||||| |||| |||||||||||||  |||||||||||| ||||||||    
T  52636709 tctatttcttccacttgctcagtccttttttccaaaattctcccatcccttcccctccaaactcgcaaacaaagcctaagaaaatt 52636624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42650692 - 42650643
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  42650692 aacctcccaaaaccctcctccaatacaattttttagttcccccaaatgag 42650643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 185
Target Start/End: Complemental strand, 45823605 - 45823427
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttt-tattatgagtaaaaaattaaccttc-aaagctctctcctcccaat 104  Q
    ||||||||||||  ||||||||||||| |||| ||||||||||| |||| |||| ||||||||  ||||  |||||| || ||| | ||  ||||||| |    
T  45823605 ccaaaaccctccttcaatacaatttttaagtttccccaaatgag-gagagttttgtattatgaagaaaag-ttaaccctctaaaacccttacctcccatt 45823508  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||| ||||||||||||| ||||||  ||||||||||  || |  ||||||||| || | ||||||||  ||||||||||||    
T  45823507 ttcctctatttcttccacttgctcactccttttttcccaagcattcccctcccttctcttccaaactcgcaaacaaagcct 45823427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 45971613 - 45971479
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    |||| |||| ||||| |||||||||||||| |||||||||||||||| | | |||  ||||||||   |||| ||||||  |||| | ||| |||| ||     
T  45971613 ccccaaaaatcctcctccaatacaattttttagttcccccaaatgag-ggggtttagtattatga-agaaaagttaacccccaaaaccctcccctctcat 45971516  T
Q  104 tttcttctatttcttccatttgctccttccttttttc 140  Q
    |||| ||||||||||||| |||||| |||||||||||    
T  45971515 tttcctctatttcttccacttgctcattccttttttc 45971479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 37756576 - 37756533
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    |||||||||||| |||||||||||||| ||||||||||||||||    
T  37756576 ccctcccctcccttcccctccaaacttccaaacaaagccttaga 37756533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 21081402 - 21081217
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    ||||||||| |||  |||||||||||||| |||| |||||||||||   | |||| | ||||||  |||||   | ||| |||| |  || |||| ||||    
T  21081402 ccccaaaactctcatccaatacaatttttaagttaccccaaatgaggagggttttgttttatgaagaaaaatgaaccctccaaaacattcccctctcaat 21081303  T
Q  105 ttcttctatttcttccatttgctccttccttttttct-----aaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
     || ||||||||||||| ||||||||||||| ||| |     ||| |||||||||| | |||||||||||||  ||||||||||||    
T  21081302 gtcatctatttcttccacttgctccttccttctttttttttcaaacccctcccctctcttcccctccaaactcgcaaacaaagcct 21081217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 42759779 - 42759852
Alignment:
Q  117 ttccatttgctccttccttttttctaaaac-cctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    ||||| || ||||||||||||||   |||| ||||||||||| |||||||||||| | ||||||||||||||||    
T  42759779 ttccacttactccttcctttttttacaaactcctcccctcccttcccctccaaacgtgcaaacaaagccttaga 42759852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 48417626 - 48417671
Alignment:
Q  2 accccccaaaaccctcccccaatacaatttttgagttcccccaaat 47  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||    
T  48417626 accctccaaaatcctcctccaatacaatttttgagttcccccaaat 48417671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 48620351 - 48620310
Alignment:
Q  3 ccccccaaaaccctcccccaatacaatttttgagttccccca 44  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  48620351 ccccccaaaaccctcctccaatacaattttttagttccccca 48620310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 675320 - 675236
Alignment:
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaaa 192  Q
    |||||||||||| | || ||| | ||||||||| ||| ||||||  |||| |||||||||||||  |||||||||||| ||||||    
T  675320 ttctatttcttctacttactcttcccttttttccaaagccctcctttcccttcccctccaaactcgcaaacaaagcctaagaaaa 675236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 18964882 - 18964934
Alignment:
Q  130 ttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    ||||||||||| |||||||||| ||||| |||||||||||||  |||||||||    
T  18964882 ttccttttttccaaaaccctcctctcccctcccctccaaactcccaaacaaag 18964934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 30198803 - 30198979
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttc 107  Q
    ||||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  |||||| |||  |||| | ||||    
T  30198803 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcctattttc 30198902  T
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcc 184  Q
     ||||||||||||| || ||  |||||||||| | ||  | ||||||||  ||||||| |||||  |||||||||||    
T  30198903 ctctatttcttccacttacttattccttttttttcaagtcttcccctccattcccctctaaactcgcaaacaaagcc 30198979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 55509943 - 55509764
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| ||||||||| || | ||| |||||||| |||||| |||||||| | |  |||| ||||||||  ||||  ||||||  |||||||||| |||||    
T  55509943 aaccctccaaaacccccctcaaatgcaattttttagttcctccaaatgaaaaatgttttgtattatgaagaaaag-ttaacccccaaagctctcccctcc 55509845  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
    || |||  | ||||||||||| |||||| ||| |||||||   | || ||| ||| | | |||||||||||| ||||||||    
T  55509844 catttttctttatttcttccacttgctcattcattttttcccgagccttcctctctctttccctccaaacttgcaaacaaa 55509764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 21358023 - 21357980
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||    
T  21358023 aaaaccctcccctcccttcccctccaaactctcaaacagagcct 21357980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 31530247 - 31530286
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  31530247 ccctcccctcccttcccctccaaactctcaaacaaagcct 31530286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 187
Target Start/End: Original strand, 32866824 - 32866939
Alignment:
Q  72 aaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaact 171  Q
    ||||||||||  |||||||| ||| || ||| |||| || | |||||||| ||||||  |||||||||| ||| |||||||||    |||||||||||||    
T  32866824 aaaaattaactctcaaagctttcttcttccattttcctcaacttcttccacttgctcaatccttttttccaaacccctcccctttattcccctccaaact 32866923  T
Q  172 ttcaaacaaagcctta 187  Q
      |||||||| |||||    
T  32866924 cgcaaacaaaacctta 32866939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 31340717 - 31340659
Alignment:
Q  127 tccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||||||| | || ||||||||||| |||| |||||||||||||  ||||||||||||    
T  31340717 tccttccttctatccaaaaccctcccatcccttcccctccaaactcccaaacaaagcct 31340659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 32648865 - 32648819
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||||||| ||||||||||||   |||||||||||||||    
T  32648865 aaaaccctcccctcccttcccctccaaacccccaaacaaagccttag 32648819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 42759683 - 42759725
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    ||||||||||| | | |||||||||||||||||||||||||||    
T  42759683 caaaaccctcctctagtacaatttttgagttcccccaaatgag 42759725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 8827927 - 8828024
Alignment:
Q  85 caaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    |||| ||||| ||||| ||| || || | |||||| | || ||||||| |||||||||||||||||| |||||  ||||| ||||||  |||||||||    
T  8827927 caaatctctcccctcctaatgtcctcaacttcttctacttactccttctttttttctaaaaccctcctctccctgccccttcaaactcgcaaacaaag 8828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15498819 - 15498860
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccc 42  Q
    |||| ||||||||||||  |||||||||||||||||||||||    
T  15498819 aaccgcccaaaaccctcatccaatacaatttttgagttcccc 15498860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 27485400 - 27485453
Alignment:
Q  134 ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||||||| ||| |||||||||||| ||| |||||||||  ||||||||||||||    
T  27485400 ttttttccaaacccctcccctcccttccactccaaactcgcaaacaaagcctta 27485453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 41363669 - 41363628
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||||||||||| || |||||||||| |||||||||||||||    
T  41363669 ccctcccctcccttcgcctccaaactctcaaacaaagcctta 41363628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 41709245 - 41709330
Alignment:
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    |||| ||||||||||||| |||||| |||||||||||  || || ||||||| | |||||| ||||||  || ||||| |||||||    
T  41709245 tttcctctatttcttccacttgctcgttccttttttcccaagccttcccctctcttcccctgcaaactcgcagacaaaaccttaga 41709330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 43031594 - 43031553
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    ||||| |||||||||| ||||||||||||| |||||||||||    
T  43031594 aaaacactcccctcccctcccctccaaactctcaaacaaagc 43031553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 45022853 - 45022898
Alignment:
Q  110 ctatttcttccatttgctccttccttttttctaaaaccctcccctc 155  Q
    |||||| ||||| |||||||||| ||||||| ||||||||||||||    
T  45022853 ctattttttccacttgctccttctttttttccaaaaccctcccctc 45022898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 7182046 - 7182002
Alignment:
Q  144 aaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||||| |||||||||||||  |||||||| ||||||    
T  7182046 aaccctcccctcccttcccctccaaactcccaaacaaaaccttag 7182002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 53299938 - 53299866
Alignment:
Q  72 aaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaa 144  Q
    |||||| ||||| |||| |  ||||||| |||| || ||||||||||||| ||  ||||||||||||||||||    
T  53299938 aaaaataaacctccaaaacattctcctctcaatgtcatctatttcttccacttaatccttccttttttctaaa 53299866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 7e-76; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 33406657 - 33406844
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  33406657 aaccccccaaaaccctctcccaatacaatttttgagttccctcaaatgagggggattttttattatgagtaaaaaattaaccttcaaagccctctcctcc 33406756  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||  |||||||||||||||    
T  33406757 caatgtcttctatttcttccacttgctccttccttttttttaaaaccctcccctcccctcccctccaaactcccaaacaaagccttag 33406844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 3658536 - 3658720
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||    
T  3658536 aaccccctaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacccccaaagctctctcctcc 3658635  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||  ||||||||||||    
T  3658636 caatgtcttctatttcttccacttgctccttccttctttccaaaaccctcccctcccctcccctccaaactcccaaacaaagcct 3658720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 34652080 - 34652263
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  34652080 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcccaat 34652179  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
     |||||||||||||||| |||||||||||||||| | ||||||||||||  || |||||||||||||| ||||||||| |||||    
T  34652180 gtcttctatttcttccacttgctccttcctttttcccaaaaccctccccctccctcccctccaaacttccaaacaaagtcttag 34652263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 23620818 - 23620969
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| |||||||||    
T  23620818 aaccccccaaaaccctccccaaatacaatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcc 23620917  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctccc 152  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  23620918 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctccc 23620969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 3571784 - 3571945
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||  ||||| | |    
T  3571784 aaccccccaaaaccctcccgcaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctctttc 3571883  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatccc 162  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  3571884 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctccc 3571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 47276027 - 47276208
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| |||||||||    
T  47276027 aaccccccaaaatcctcccccaatataatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcc 47276126  T
Q  101 caatttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
     ||| ||||||||||||||||||||||||| || ||||||| |||||||||||||||| |||| ||||||||  ||||||||    
T  47276127 aaatgtcttctatttcttccatttgctcctccctttttttcaaaaaccctcccctcccctcccatccaaactcccaaacaaa 47276208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 5968068 - 5968256
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| |||||| || ||||||    
T  5968068 aaccctccataaccctcccctaatacaatttttgagttcccccaaatgagggggattttttgttatgagtaaaaaattaacctccaaagcgctttcctcc 5968167  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaa 190  Q
    |||| |||||||||||||||| ||||||||||| |||||| |||||||||||||||| |||| | ||||||  |||||||||||| ||||    
T  5968168 caatgtcttctatttcttccacttgctccttcc-tttttccaaaaccctcccctcccctccctttcaaactcccaaacaaagcctaagaa 5968256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 7667192 - 7667374
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||||||||| ||||||||||||||||||||   |||| ||||||| | ||||||||||||| || ||||||||||||| |||||||||||||||||||    
T  7667192 cccccaaaaccgtcccccaatacaatttttgaagccccctaaatgagggggattttttattattaggaaaaaattaacctccaaagctctctcctcccaa 7667291  T
Q  104 tttcttctatttcttccatttgctccttc-cttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    | |||||||||||||||| |||||| |||  ||||||| |||||||||||||||| |||||||||||||  ||||||||||||    
T  7667292 tgtcttctatttcttccacttgctcattctattttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagcct 7667374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 28437567 - 28437721
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||| || || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  28437567 aaccccccaaaatccacctccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 28437666  T
Q  101 caatttcttctatttcttccatttgctccttccttttttct-aaaaccctcccct 154  Q
    |||| |||| ||||||||||| ||||||||||||||||| | |||||||||||||    
T  28437667 caatgtcttttatttcttccacttgctccttccttttttttcaaaaccctcccct 28437721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 33810237 - 33810423
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||| |||| | |||||||||    
T  33810237 aacccctcaaaaccctcccccaatacaatttttgagttctcccaaatgagggggatattttcttatgagtaaaaaattaacctccaaaaccctctcctcc 33810336  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||| |||||||||||||||| || || |||||||||||| ||||| ||||| |||| | | |||||||||  ||||||||||||||    
T  33810337 caatgtcttctatttcttccacttacttcttccttttttccaaaactctcccatccccttcgctccaaactcccaaacaaagcctta 33810423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 36747351 - 36747168
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||   ||||||||||||||||||| || |||||||||| | ||||| |||||||||||||||||||||||| |||| | ||||||| |    
T  36747351 aaccccccaaaacct--ccccaatacaatttttgagatcacccaaatgagggggatttcttattatgagtaaaaaattaacctccaaaaccctctccttc 36747254  T
Q  101 caatttcttctatttcttccatttgctccttc-cttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||||||||| ||||||||||  ||||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  36747253 caatgtcttctatttcttccacttgctccttcatttttttccaaaaccctcccctcccctcccctccaaactctcaaacaaagcct 36747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 187
Target Start/End: Original strand, 33113670 - 33113847
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattat---gagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| | |||||||| ||||   ||||| ||||||||||| |||||| ||||||||||||    
T  33113670 ccaaaaccctccccaaatacaatttttgagttcccc-aaatgagggggatttttttttatcatgagtagaaaattaacctccaaagccctctcctcccaa 33113768  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||     |||||||||||||  ||||||||||||||    
T  33113769 tgtcttctatttcttccacttgctccttccttttttctaaaaccctcccc-----tcccctccaaactcccaaacaaagcctta 33113847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 46449225 - 46449076
Alignment:
Q  6 cccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatt 105  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||||     
T  46449225 cccaaaacccttccccaatacaatttttgagttccct-aaatgagggagattttttattatgagtaaaaaattaaccttcaaaaccctctcttcccaata 46449127  T
Q  106 tcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    | || ||||||||||| |||||| ||||||||||| |||||||| ||||||    
T  46449126 ttttttatttcttccacttgctcattccttttttccaaaaccctgccctcc 46449076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 19644351 - 19644206
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaattt 106  Q
    |||||||||||  ||||||||||||||||||||||| |||| || | ||||||||||||||| |||||||||||||| |||||||||||| || |||| |    
T  19644351 ccaaaaccctcatccaatacaatttttgagttcccctaaataagggggattttttattatgattaaaaaattaacctccaaagctctctcatctcaatgt 19644252  T
Q  107 cttctatttcttccatttgctccttccttttttctaaaaccctccc 152  Q
    ||| ||||||||||| |||||||||||||||||| |||||||||||    
T  19644251 cttgtatttcttccacttgctccttccttttttccaaaaccctccc 19644206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 42620377 - 42620513
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||| |||||| |||||||||    
T  42620377 aacccctcaaaatcctcccccaatacaatttttgagttcccc-aaatgaggggaattttttattatgagtaaaaaattaacctccaaagccctctcctcc 42620475  T
Q  101 caatttcttctatttcttccatttgctccttccttttt 138  Q
    |||| |||||||||||||||| |||||| |||||||||    
T  42620476 caatgtcttctatttcttccacttgctcattccttttt 42620513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 41002276 - 41002427
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| || | | ||||||| |    
T  41002276 aaccccctaaaaccctcccccaatataatttttgagttcccccaaatgaggggaattttttattatgagtaaaaaattaacctccagaaccctctccttc 41002375  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccc 153  Q
    | || || ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  41002376 cgatgtc-tctatttcttccacttgctccttcattttttccaaaaccctcccc 41002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 43778601 - 43778790
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||||| |  ||||||||||||||||||||||||||||| || ||| |||| || |    
T  43778601 aaccccccaaaaccctcccccaatacaattttttagttccttcaaatgaggggaattttttattatgagtaaaaaattaacctccatagccctcttcttc 43778700  T
Q  101 caatttcttctatttcttccatttgctccttccttt-tttctaaaa----ccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||||||||| |||||  ||  ||| |||| ||||    |||||||||||| |||||||||||||| ||||||||||||    
T  43778701 caatgtcttctatttcttccacttgcttttttttttctttccaaaaccctccctcccctcccctcccctccaaacttccaaacaaagcct 43778790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 44720145 - 44719969
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccc-caaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    ||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| || |||||||    
T  44720145 aaccctccataaccctcctccaatacaatttttgagttcccctcaaatgagagagattttttattacgagtaaaaaattaacctccaaaactatctcctc 44720046  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
        | |||||||||||||| | || ||||||  |||||| ||||||||||| ||||| |||||||||||||| ||||||||    
T  44720045 ----tgtcttctatttcttctacttactcctt-attttttttaaaaccctcctctcccctcccctccaaacttccaaacaaa 44719969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 46745615 - 46745780
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    |||||| || ||||| ||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||| | ||  |||||  ||| |||| ||     
T  46745615 cccccagaatcctcctccaatacaatttttgagttcccccaaatgagagggattttgcattatgaataaaaaatcatcccccaaagtcctcccctctca- 46745713  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaac 170  Q
    | |||||||||| ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  46745714 tgtcttctattttttccacttgctccttccttttttccaaaaccctcccctcccctcccctccaaac 46745780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 43188908 - 43188770
Alignment:
Q  19 cccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttctt 118  Q
    ||||||||||| ||||||||||||||||||||    ||||||||||||||||||||||||||||| |||  | |||||||| |||| | |  ||||||||    
T  43188908 cccaatacaatatttgagttcccccaaatgaggtgaattttttattatgagtaaaaaattaacctccaagaccctctcctctcaatgtttcatatttctt 43188809  T
Q  119 ccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    ||  |||||||||||||||||| ||||||||||||||||    
T  43188808 ccccttgctccttccttttttccaaaaccctcccctccc 43188770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 38505359 - 38505543
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||||||||   | |||| ||||||||  ||||  | | ||  |||||| ||| |||||    
T  38505359 aaccctccaaaaccctcctccaatacaattttatagttcccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcccctcc 38505458  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||| ||||||||||||| |||||| |||||||||||  || || ||||||||| |||||||||||||  ||||||||||||    
T  38505459 cattttcctctatttcttccacttgctcattccttttttcccaagccttcccctcccttcccctccaaactcgcaaacaaagcct 38505543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 15748974 - 15749162
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| ||| |||||  |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  ||||||||||  ||||    
T  15748974 aacccccaaaatccctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcc 15749073  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    || |||||||||||||||||| |||||| |||||||||||  || || ||||||||| |||||||||||||  |||||||| |||||||    
T  15749074 cattttcttctatttcttccacttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaacaaaaccttaga 15749162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 19644218 - 19644137
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaa 88  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| | | |||||||||||||| ||||||||||||||||||    
T  19644218 ccaaaaccctcccacaatacgatttttgagttcccccaaatgaggggggttttttattatgaggaaaaaattaaccttcaaa 19644137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 16805592 - 16805780
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||   || |||| ||||||||  ||||  | ||||  |||||| |||  ||||    
T  16805592 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaagaaggttttgtattatgaagaaaagttaaacccccaaagccctcctctcc 16805691  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    || |||| ||| ||||||||| || ||  |||||||||||  ||  | ||||||||| |||||||||||||  ||||||||||||||||    
T  16805692 cattttcctctctttcttccacttacttattccttttttcccaagtcttcccctcccttcccctccaaactcgcaaacaaagccttaga 16805780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 6746594 - 6746775
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| ||||| ||| || |||||||||||||||||||||||||||||||  |  |||| |||||| |  ||||| | | ||  |||||| ||| |||||    
T  6746594 aaccctccaaaccccccctccaatacaatttttgagttcccccaaatgaggaaagttttgtattataaagaaaaattaaccccccaaagccctcccctcc 6746693  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||||||||   |||||| |||||| ||||||||||| ||| |||||||||| | ||||||| |||||  ||||||||||||    
T  6746694 cattttcttcta---cttccacttgctcattccttttttccaaatccctcccctcacttcccctctaaactcacaaacaaagcct 6746775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 43348254 - 43348446
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| |||||||||||| | |||||||||||| ||||||||||||| ||   |||||  ||||||||  ||||| |||||   |||||||||| |||||    
T  43348254 aaccctccaaaaccctcctctaatacaattttttagttcccccaaataaggaggatttagtattatgaa-aaaaagttaactcccaaagctctcccctcc 43348352  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaaatt 194  Q
    || |||| |||||||||| || ||| || ||| |||||||  ||| | |||| || | |||| | ||||||| |||||||||||| ||||||||    
T  43348353 cattttcctctatttctttcacttgatcattctttttttcccaaatcttcccttctcttccctttcaaacttgcaaacaaagcctaagaaaatt 43348446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 43741761 - 43741586
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttt-tattatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    |||||| ||||| |||||   |||||||||||||||||| |||||||||| |||| |||| ||||||||  ||||  ||||||  |||| | ||| ||||    
T  43741761 aaccccacaaaatcctcctttaatacaatttttgagttctcccaaatgag-gagagttttgtattatgaagaaaag-ttaacca-caaaaccctcccctc 43741665  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaac 178  Q
    ||| |||| |||||||||| || |||||| |||||||||||| || || ||||||| | |||||||||||||| |||||    
T  43741664 ccattttcctctatttctttcacttgctcattccttttttctcaagccttcccctcacttcccctccaaacttgcaaac 43741586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 23325720 - 23325781
Alignment:
Q  95 tcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||||||||| |||||||||||||||| || ||||||||||||||| |||||| ||||||||    
T  23325720 tcctcccaatgtcttctatttcttccacttactccttccttttttccaaaaccgtcccctcc 23325781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 30183798 - 30183716
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccc--tcccatcccctccaaactttcaaacaaagccttaga 189  Q
    ||||||||||||| |||||||||||| ||||| ||| ||||||||  |||| ||||||| |||||  ||||||||||||||||    
T  30183798 tctatttcttccacttgctccttcctattttcgaaagccctcccccatcccttcccctctaaactcgcaaacaaagccttaga 30183716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 34399081 - 34399244
Alignment:
Q  20 ccaatacaatttttgagttccccc-aaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttctt 118  Q
    ||||| |||||||||||||||||| |||||| || |||||| |||||| || |||||   | || ||||||| ||| |||  |||  | ||| |||||||    
T  34399081 ccaatgcaatttttgagttccccccaaatgatagggattttgtattataaggaaaaatgaacccctcaaagccctcccctatcaaagttttccatttctt 34399180  T
Q  119 ccatttgctccttccttttttctaaaaccctcccctcccatcc-cctccaaactttcaaacaaa 181  Q
    ||  ||||| |||||||||||| |||  ||||||||||| ||| ||||||||||| ||||||||    
T  34399181 cctcttgcttcttccttttttccaaagtcctcccctcccttcctcctccaaacttgcaaacaaa 34399244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 2826275 - 2826321
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  2826275 cccccaaaaccctcctccaatacaattttttagttcccccaaatgag 2826321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 155
Target Start/End: Original strand, 42113090 - 42113136
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctc 155  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||    
T  42113090 tctatttcttccacttgctccttccttttttccaaaaccctcccctc 42113136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 42220074 - 42219956
Alignment:
Q  21 caatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttcc 120  Q
    |||||||||||||||||| | |||||| ||||||||||| |||||||| ||||| ||||||   ||||   |||||||  |||| | ||||||||||| |    
T  42220074 caatacaatttttgagtttctccaaataagagagattttatattatgaataaaatattaacgaccaaaatcctctcctaacaatattttctatttctttc 42219975  T
Q  121 atttgctccttcctttttt 139  Q
    | ||| ||||| |||||||    
T  42219974 acttgatccttactttttt 42219956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 7391526 - 7391619
Alignment:
Q  95 tcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    ||||| |||| ||||||||||||||||  | ||||||||||||||   ||||||| ||||||  |||||||||||||  ||| |||||||||||    
T  7391526 tcctctcaatgtcttctatttcttccacctactccttcctttttttccaaacccttccctccattcccctccaaactcgcaagcaaagccttag 7391619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 30080933 - 30080844
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||| ||  | ||||||||| || ||| ||||||  |||| |||||||    
T  30080933 cctcccattttcctctatttcttccacttgctccttccttttttctcaagtcttcccctcccttctcctacaaactcgcaaataaagcct 30080844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 139
Target Start/End: Complemental strand, 38137991 - 38137859
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttc-aaagctctctcctcccaatt 105  Q
    |||| ||||||| ||||||||| ||||||| |||||||||||||   |||||| ||||||||   |||||| ||||| | ||||  ||| |||||||||     
T  38137991 ccaataccctcctccaatacaaattttgagctcccccaaatgaggaggattttgtattatga-agaaaaatgaacctcctaaagtcctcccctcccaatg 38137893  T
Q  106 tcttctatttcttccatttgctccttcctttttt 139  Q
    || || ||||||||||  ||||||||||||||||    
T  38137892 tcctccatttcttccacgtgctccttcctttttt 38137859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 43665190 - 43665249
Alignment:
Q  18 ccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaat 77  Q
    |||||||| |||||||||||| | |||||||||  |||||||||||||| ||||||||||    
T  43665190 ccccaatataatttttgagtttctccaaatgaggtagattttttattataagtaaaaaat 43665249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 6635782 - 6635701
Alignment:
Q  109 tctatttcttccatttgctccttcctttttt--ctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    ||||||||||||| |||||||||| ||||||  ||||||||||||||||   || | ||||||||  |||||||||||||||    
T  6635782 tctatttcttccaattgctccttcatttttttcctaaaaccctcccctcatttctcatccaaactcgcaaacaaagccttag 6635701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 19791677 - 19791587
Alignment:
Q  72 aaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatccc 162  Q
    |||| ||||||| |||||  ||| ||||||| ||  |||||||||||||| |||||| |||||||||||  ||||| ||||||||| ||||    
T  19791677 aaaagttaacctccaaagtcctcccctcccatttgtttctatttcttccacttgctcattccttttttcccaaaccttcccctcccctccc 19791587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 22556808 - 22556905
Alignment:
Q  85 caaagctctctcctcccaatttcttctatttctt-ccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    |||||||| |||||| |||| || |||||||||| |||||| |||||||||||||| | |||| ||| |||||  || ||||||||||| |||||||||    
T  22556808 caaagctc-ctcctcacaatgtcctctatttctttccatttactccttccttttttttcaaactctctcctccattctcctccaaacttgcaaacaaag 22556905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 23550837 - 23550695
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttc 107  Q
    ||||| ||||| |||||||||   || ||||||||||||||| | || |||| ||||||||  ||||| ||||||  |||| | ||| ||||||||| ||    
T  23550837 caaaatcctcctccaatacaacgctttagttcccccaaatgaaaaaggttttatattatgaagaaaaa-ttaacccccaaacc-ctcccctcccaatatc 23550740  T
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctccc 152  Q
     | ||||||||| | || ||||||||||||||| ||||| |||||    
T  23550739 ctatatttcttctactttctccttccttttttccaaaactctccc 23550695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 23551620 - 23551547
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaact 171  Q
    ||||||||| || | ||||||||||| ||| ||||| |||||||||||||  |||||||||| ||| |||||||||    
T  23551620 cctcccaatgtcctttatttcttccacttgttccttacttttttctaaaa--ctcccctcccttcctctccaaact 23551547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 32650501 - 32650593
Alignment:
Q  97 ctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    |||||| |||| ||||||||||||| |||||| ||| |||||||  ||||  || |||| | |||||||||||||  ||||||||| ||||||    
T  32650501 ctcccattttcctctatttcttccacttgctcattctttttttcccaaactttctcctctcttcccctccaaactcgcaaacaaagtcttaga 32650593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 42254014 - 42253829
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||  ||||| ||||||| |||||| |||||||||   | |||| ||||||||  | ||| ||||||   |||||  ||  |||     
T  42254014 aaccccccaaaaccctccttcaatataattttttagttcctccaaatgaggagggttttgtattatga--agaaagttaacccctaaagccttcctctct 42253917  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    || |||| ||||||||||||| || ||  |||||||||||  || || | || |||| ||||||||||| |  |||||||||||||||    
T  42253916 cattttcctctatttcttccacttacttattccttttttcccaagcctttccttcccttcccctccaaattcgcaaacaaagccttag 42253829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 171
Target Start/End: Complemental strand, 43741397 - 43741234
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaattt 106  Q
    |||||||  ||| ||||||||| |||| |||| ||||||||||   || |||| ||||||||  ||||||||||||  |||||| ||  ||||| ||| |    
T  43741397 ccaaaacattcctccaatacaactttttagttaccccaaatgatgaaggttttgtattatgaa-aaaaaattaacccacaaagcccttccctcctaatgt 43741299  T
Q  107 cttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaact 171  Q
    | ||||||| ||||||||||| ||||  |||| | |||||  || |||||| || ||||||||||    
T  43741298 catctatttattccatttgcttcttcaattttcccaaaactttctcctcccttcgcctccaaact 43741234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Complemental strand, 28437398 - 28437359
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  28437398 ccctcccctcccttcccctccaaactctcaaacaaagcct 28437359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 5967910 - 5967868
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||    
T  5967910 ccctcccctcccttcctctccaaacttttaaacaaagccttag 5967868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 33872224 - 33872266
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||| |||||||||||||  |||||||||||||||    
T  33872224 ccctcccctcccctcccctccaaactcgcaaacaaagccttag 33872266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 42471374 - 42471332
Alignment:
Q  97 ctcccaatttcttctatttcttccatttgctccttcctttttt 139  Q
    |||||||  ||||||||||||||||||||||||||| ||||||    
T  42471374 ctcccaacgtcttctatttcttccatttgctccttcatttttt 42471332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 185
Target Start/End: Complemental strand, 42854181 - 42854120
Alignment:
Q  123 ttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||| |  ||||||||||||    
T  42854181 ttgctccttcctttttcc-aaagccctcccctcccttcccctccaaattcacaaacaaagcct 42854120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 44643733 - 44643655
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||||||||||||| |||||||||| ||||||| |  |||||| | || | |||||| ||||||  ||||||||||||||    
T  44643733 tctatttcttccacttgctccttcattttttccattaccctctcatctcttccccttcaaactcgcaaacaaagcctta 44643655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 7667021 - 7666980
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||||||||||| |||||||||||||  ||||||||||||||    
T  7667021 ccctcccctcccttcccctccaaactcccaaacaaagcctta 7666980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 31055426 - 31055389
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccc 42  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  31055426 ccccaaaaccctcctccaatacaattttttagttcccc 31055389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 31891321 - 31891204
Alignment:
Q  22 aatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttcca 121  Q
    ||||||| |||| ||||||||||| |||||   ||||| ||||||||  |||||   ||||| || | | ||||| ||||||| || ||||||||||||     
T  31891321 aatacaagtttttagttcccccaattgagaagcattttgtattatgaagaaaaatgaaacctccataaccctctcatcccaatgtcctctatttcttcct 31891222  T
Q  122 tttgctccttcctttttt 139  Q
    |||||| ||| |||||||    
T  31891221 tttgcttctttctttttt 31891204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32650416 - 32650465
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||||||||| ||||| ||||| |||||||| |||||| |||||||||    
T  32650416 aaccccccaaaatcctcctccaatgcaattttttagttcctccaaatgag 32650465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 33872144 - 33872185
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||||||| |||||||||||| | ||||||||||||||||    
T  33872144 aaaaccctcctccaatacaatttgttagttcccccaaatgag 33872185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 38236012 - 38236057
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||||| |||||||||| |||||||||||||  ||||||||||||||    
T  38236012 aaaactctcccctcccttcccctccaaactcccaaacaaagcctta 38236057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 2826367 - 2826459
Alignment:
Q  97 ctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    |||||| |||| ||||||||||||| ||| || ||||||||| |  || || ||||||||  || ||||||||||  ||||||||| ||||||    
T  2826367 ctcccattttcctctatttcttccacttgttcattcctttttccccaagccttcccctccattctcctccaaactcgcaaacaaagtcttaga 2826459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 4058312 - 4058352
Alignment:
Q  149 tcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    ||||||||| |||||||||||||  ||||||||||||||||    
T  4058312 tcccctcccttcccctccaaactcgcaaacaaagccttaga 4058352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 7181799 - 7181751
Alignment:
Q  20 ccaatacaatttttgagttcccccaaatgagagagattttttattatga 68  Q
    ||||| |||||||||||||||||||||| ||||  ||||| ||||||||    
T  7181799 ccaatgcaatttttgagttcccccaaattagaggaattttgtattatga 7181751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 12624483 - 12624582
Alignment:
Q  86 aaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatccc-ctccaaactttcaaacaaagcc 184  Q
    |||||||| |||| ||||| || ||||||||||| | || |||||||||| |||   ||||||| ||||||  |||| |||||||||| |||||||||||    
T  12624483 aaagctct-tccttccaatgtcatctatttcttcaacttactccttccttattttccaaacccttccctccattcccactccaaacttgcaaacaaagcc 12624581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22394218 - 22394178
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttccc 41  Q
    |||||| | |||||||| |||||||||||||||||||||||    
T  22394218 aacccctctaaaccctcacccaatacaatttttgagttccc 22394178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 35701116 - 35700930
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  35701116 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 35701017  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||| ||||||||||||| || |||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||||||    
T  35701016 caatgtcttctatttctttcacttgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagcctta 35700930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 38928727 - 38928888
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||  ||||| | |    
T  38928727 aaccccccaaaaccctcccgcaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcattc 38928826  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatccc 162  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  38928827 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctccc 38928888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 41695026 - 41694878
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||    
T  41695026 caaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaactctctccttccaatgtc 41694927  T
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||    
T  41694926 ttctatttcttccacttgctccttcctttttttcaaaaccctcccctcc 41694878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 2021036 - 2020882
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  2021036 aacccctcaaaaccctcccccaatacaatttttgagttcctccaaa-gagggggattttttattatgagtaaaaaattaacctccaaagctctctcctcc 2020938  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| ||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  2020937 caatgtctactatttcttccacttgctccttccttttttccaaaaccctcccctcc 2020882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 27480197 - 27480375
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||  |||||||||||||||| |||||| |||||||||    
T  27480197 aaccccctaaaaccctcccccaatacaatttttgagttccctcaaatgaggaggattttttatta--agtaaaaaattaacctccaaagccctctcctcc 27480294  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
    |||| |||||||||||||||| ||||| |||||||||||| |||||||||||||||  |||||| ||||||  ||||||||    
T  27480295 caatgtcttctatttcttccacttgcttcttccttttttccaaaaccctcccctcctctccccttcaaactcccaaacaaa 27480375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 4649012 - 4649167
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||     
T  4649012 aaccccctaaagccctcccccaatacagtttttgagttccctcaaatgagggggattttttattatgagtaaaaaattaaccttcaaagccctctcctct 4649111  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| |||||| ||| ||||||| |||||||||||||||    
T  4649112 caatgtcttctatttcttccacttgctcattctttttttccaaaaccctcccctcc 4649167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 1658225 - 1658078
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagag-attttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttc 107  Q
    |||| |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| |||||||||||||| |||||  ||||||||||||| ||    
T  1658225 aaaatcctcccccaatacaatttttgaattcccccaaatga-agaggattttttattatgactaaaaaattaacctccaaagtcctctcctcccaatgtc 1658127  T
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1658126 ttctatttcttccacttgctccttccttttttctaaaaccctcccctcc 1658078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 32760812 - 32760657
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| |||||| |||||||||    
T  32760812 aacccccaaaaaccctcccc-aatacaatttttgagttcccccaaatgagggagattttttattataagcaaaaaattaacctccaaagccctctcctcc 32760714  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
     ||| |||| |||||||||||  ||||||||||||||||| ||||||||||||||||    
T  32760713 taatgtcttatatttcttccacctgctccttccttttttccaaaaccctcccctccc 32760657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 10295539 - 10295352
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||| ||||||| ||| |||||||||||||||||| |||||||||| ||  | |||||||||||||||||||||||||||||| ||||||  ||||||||    
T  10295539 aacctcccaaaatccttccccaatacaatttttgaattcccccaaaagacggggattttttattatgagtaaaaaattaacctccaaagccatctcctcc 10295440  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcc-cctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||| | |||| |||||| ||||||  ||| ||||||||||    
T  10295439 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcctcatcccctccccttcaaactcccaatcaaagcctta 10295352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 17092953 - 17092799
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||||| || |||||| ||||||| |    
T  17092953 aaccccccaaaaccctcccccaatacaatttttgagtttccccaaatgag-gaaattttttactatgagtaaaaaattaatctccaaagccctctccttc 17092855  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||| ||||||| |||||||||| ||||||| |||||||||||||||    
T  17092854 caatgtcttctatatcttccacttgctccttctttttttccaaaaccctcccctcc 17092799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 41638401 - 41638226
Alignment:
Q  10 aaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttctt 109  Q
    |||||||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||||| | |||| ||||||||||| ||| ||||    
T  41638401 aaaccctcccccaatacaattttttagttcccc-aaatgagggaaattttttattatgagtaaaaaattaacttccaaaactctctcctcctaatgtctt 41638303  T
Q  110 ctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctt 186  Q
    ||||||| |||| |||||||||||||||||| ||||| || ||||||| ||||| ||||| || |||||||| ||||    
T  41638302 ctatttcatccacttgctccttccttttttccaaaactcttccctcccttccccaccaaatttccaaacaaaacctt 41638226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 26149659 - 26149503
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||  |   |||||||||| ||||||||||||||||| |||||| |||||||||    
T  26149659 aacccctcaaaaccctctcccaatacaatttttgagttcccccaaatgatgggacttttttattacgagtaaaaaattaacctccaaagccctctcctcc 26149560  T
Q  101 caatttcttctatttcttccatttgctccttccttttttct-aaaaccctcccctcc 156  Q
    |||| |||||||||||||||| ||| ||||||||||||| | ||||| |||||||||    
T  26149559 caatgtcttctatttcttccacttgatccttccttttttttcaaaactctcccctcc 26149503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 38302400 - 38302533
Alignment:
Q  24 tacaatttttgagttcccccaaatgagagaga-ttttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccat 122  Q
    ||||||||||||||||||||||||||| | || ||||||||||||||||||| |||||||| |||||| |||||||| |||| ||||||||||||||||     
T  38302400 tacaatttttgagttcccccaaatgagggggaattttttattatgagtaaaatattaacctccaaagccctctcctctcaatgtcttctatttcttccac 38302499  T
Q  123 ttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||||||||||||||||  |||||||||||||||    
T  38302500 ttgctccttcctttttttcaaaaccctcccctcc 38302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 25026978 - 25026838
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||  |||||||||    
T  25026978 aaccccccaaaacccttccccaatacaattttttagttctcccaaatgagggagattttttattatgagtaaaaaattaacctccaaagacctctcctcc 25026879  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaacc 147  Q
    |||| ||      |||||||| |||||||||||||||||| ||||||    
T  25026878 caatgtc------ttcttccacttgctccttccttttttccaaaacc 25026838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 187
Target Start/End: Original strand, 37508418 - 37508600
Alignment:
Q  3 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctccca 102  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| |  |||||||||||||| |||||||||||||| |||||| ||||||| |||    
T  37508418 cccccaaaaaccctcccccaatacaatttttgagttcctccaaatgaggggaattttttattatgaataaaaaattaacctccaaagccctctccttcca 37508517  T
Q  103 atttc-ttctatttcttccatttgctcctt-ccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    || || || ||||||||||| |||||| ||   ||||||| ||||||||||||||    ||||||||||||  ||||||||||||||    
T  37508518 atgtctttttatttcttccacttgctctttattttttttccaaaaccctcccctc----cccctccaaactcccaaacaaagcctta 37508600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 38120216 - 38120381
Alignment:
Q  17 cccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaag-ctctctcctcccaatttcttctattt 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||| || || |||| |||| ||||||||||    
T  38120216 cccccaatacaatttttgagttcccccaaatgagggagatttttgattaagagtaaaaaattaacctccaaagtctttc-cctctcaatgtcttctattt 38120314  T
Q  116 cttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
     ||||| || ||| ||||||||||  ||||     |||||||||||||||||||||  |||| |||||||||    
T  38120315 gttccacttactcattcctttttttcaaaa-----ccctcccatcccctccaaactcccaaagaaagcctta 38120381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 5772745 - 5772930
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| |||||||||||| |||||||||||||| | |||| |||||||||   | |||| ||||||||  ||||  ||||||  |||||| |||  ||||    
T  5772745 aaccctccaaaaccctcctccaatacaattttttaattcctccaaatgaggagggttttgtattatgaagaaaag-ttaacccccaaagccctcctctcc 5772843  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    || |||||||||||||||||| |||||| ||| |||||||  || || ||||||||| ||||||||||||| | |||||||||||||    
T  5772844 cattttcttctatttcttccacttgctcattctttttttcctaagccttcccctcccttcccctccaaactcttaaacaaagcctta 5772930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 35868883 - 35868758
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||| |  |||||| ||||   |||||| |||||||| |||| | ||||||||||||    
T  35868883 ccccaaaaactctcccccaatataatttttgagttcccccaaatgaggggaatttttcatta---gtaaaagattaacctccaaaaccctctcctcccaa 35868787  T
Q  104 tttcttctatttcttccatttgctccttc 132  Q
    | |||||||||||||||| || |||||||    
T  35868786 tgtcttctatttcttccacttcctccttc 35868758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 35708783 - 35708966
Alignment:
Q  6 cccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatt 105  Q
    ||||||||||||| ||| |||||||||| ||||||| ||||||||   |||||| || | |||  ||||| | | ||  |||||| | ||||| |||||     
T  35708783 cccaaaaccctcctccagtacaattttttagttccctcaaatgaggaggattttatactttgaagaaaaactaaccccccaaagccc-ctccttccaatg 35708881  T
Q  106 tcttctatttcttccatttgctccttccttttttcta-aaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    || || |||||||||| || |||||||||||||| |  ||||||||||||||| |||||||||||||  ||||||||||||||||    
T  35708882 tcctcaatttcttccacttactccttccttttttttccaaaccctcccctcccttcccctccaaactcacaaacaaagccttaga 35708966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 35683517 - 35683684
Alignment:
Q  20 ccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttc 119  Q
    |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  | |||| |||  |||||| ||||||||||||||||    
T  35683517 ccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccgaagccctcctctcccattttcttctatttcttc 35683616  T
Q  120 catttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    || |||||| |||||||||||  ||||| ||||||||| |||||| ||||||  ||||||||||||||    
T  35683617 cacttgctcattccttttttcctaaaccttcccctcccttccccttcaaactcgcaaacaaagcctta 35683684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 35704670 - 35704583
Alignment:
Q  97 ctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcc 184  Q
    |||||||| || ||||||||||||| ||| |||||||||||| | |||||||||||||||| ||| |||||||||| |||||||||||    
T  35704670 ctcccaatgtcctctatttcttccacttgttccttcctttttcccaaaaccctcccctcccttcctctccaaacttgcaaacaaagcc 35704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 43496561 - 43496376
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    |||||||||||||   |||||||| || || ||||||  ||||| || | |||||| |||||| | |||||||||||||  |||| | |||||||||||     
T  43496561 cccccaaaaccctataccaatacatttgtttagttccttcaaataagggggattttgtattataaataaaaaattaacccacaaaaccctctcctcccat 43496462  T
Q  104 tttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
      | |||||||||||||| | | || |||| ||||||| |||||||||||||  | |||||||||||||  |||||||||||||||    
T  43496461 cgtgttctatttcttccactagttctttcccttttttccaaaaccctcccctttcttcccctccaaactcgcaaacaaagccttag 43496376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 6491236 - 6491123
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    |||||||| | ||| |||||||||||||||||||||||||||||||  ||||||| ||||||||   |||||| ||||  |||||| ||||||| |||||    
T  6491236 ccccaaaatcttcctccaatacaatttttgagttcccccaaatgaggaagattttgtattatga-agaaaaatgaacccccaaagccctctcctaccaat 6491138  T
Q  105 ttcttctatttcttc 119  Q
     |||| |||||||||    
T  6491137 gtcttttatttcttc 6491123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 25598819 - 25598928
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttct 108  Q
    ||||| || |||||||| ||||||| ||||||||||||| ||   || |||||||||||| |||||||||||||  || ||| ||||||||||||| |||    
T  25598819 aaaactcttccccaatataatttttaagttcccccaaataaggaggaatttttattatgaataaaaaattaacccccacagccctctcctcccaatgtct 25598918  T
Q  109 tctatttctt 118  Q
    | ||||||||    
T  25598919 tatatttctt 25598928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 10438042 - 10437858
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| |||||||||||| ||||||||| |||| |||||| | |||||||   |||||| |||||| |  ||||  | | ||  |||||  ||| |||||    
T  10438042 aaccctccaaaaccctcctccaatacaactttttagttcctctaaatgaggaggattttgtattataaagaaaagttaaccccccaaagacctcccctcc 10437943  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||  ||||||||||||| |||||| |||||||||||  || || ||| ||||| |||||||||||||  ||||||||||||    
T  10437942 catttttctctatttcttccacttgctcattccttttttcccaagccttcctctcccttcccctccaaactcgcaaacaaagcct 10437858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12096959 - 12096792
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagt--aaaaaattaaccttcaaagctctctcct 98  Q
    ||||||||||||| ||| || | ||||||||||||||||||||||      ||||||||||||||||| |  ||||||| ||||| |||||| |||||||    
T  12096959 aaccccccaaaacactctccta-tacaatttttgagttcccccaa------gagattttttattatgaataaaaaaaataaacctccaaagccctctcct 12096867  T
Q  99 cccaatttcttctatttcttccatttgctccttccttt--tttctaaaaccctcccctcccatcccctccaaact 171  Q
    | |||| | ||  |||||||||| ||| |||||  |||  |||||||||||||| | || | |||||||||||||    
T  12096866 ctcaatgtttttcatttcttccacttgttccttttttttctttctaaaaccctctcatctcctcccctccaaact 12096792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38568392 - 38568441
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  38568392 aaccccccaaaaccctcctccaatataattttttagttcccccaaatgag 38568441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 39649627 - 39649442
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||| ||||| |||||||||||||| |||||| |||||||||   | |||| ||| ||||  ||||  | | ||  |||||| |||  ||||    
T  39649627 aaccccccaaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaagccctcctctcc 39649528  T
Q  101 caatttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||| | ||||||||||| |||||| |||| |||||||  || || | ||||||| | |||||||||||  ||||||||||||    
T  39649527 cattttcatttatttcttccacttgctcattcctttttttcccaagcctttccctcccttgccctccaaactcgcaaacaaagcct 39649442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 1176062 - 1176118
Alignment:
Q  106 tcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatccc 162  Q
    ||||||||| |||||| |||||||||||||||||| ||| |||||||||||| ||||    
T  1176062 tcttctattccttccacttgctccttccttttttccaaagccctcccctcccttccc 1176118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 10843100 - 10842961
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||| |||  ||||||||||||| |||||| |||||||||   | |||| ||||||||   |||| ||||||  |||||| |||  ||||    
T  10843100 aaccccccaaaaccgtccttcaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcc 10843002  T
Q  101 caatttcttctatttcttccatttgctccttccttttttct 141  Q
    || |||| ||||||||||||| || ||  ||||||||||||    
T  10843001 cattttcctctatttcttccacttacttattccttttttct 10842961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9096375 - 9096308
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatga 68  Q
    ||||| |||||| ||||| ||||||||||| |||||||||||||||| ||  ||||||| ||||||||    
T  9096375 aaccctccaaaatcctcctccaatacaattgttgagttcccccaaattaggaagattttgtattatga 9096308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 15739556 - 15739405
Alignment:
Q  31 tttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacct-tcaaagctctctcctcccaatttcttctatttcttccatttgctcc 129  Q
    ||||||||  || |||||||| ||||||| |||||||| |||||||||||||| ||||| | |||| || ||||| |||||||||| | ||| |||| |     
T  15739556 tttgagttaaccaaaatgagaaagattttgtattatgaataaaaaattaacctctcaaaaccctcttcttccaatgtcttctatttttcccacttgcaca 15739457  T
Q  130 ttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
    ||| |||  |  |||||||||  ||||  |||||| |||||| |||||||||    
T  15739456 ttcatttccttcaaaaccctcatctccactccccttcaaactctcaaacaaa 15739405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 32750688 - 32750577
Alignment:
Q  10 aaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttctt 109  Q
    ||||||| |||||||| || |||| |||||||||| |||||   |||||| |||||| | || |||||||| |   ||||| |||||||| |||||| ||    
T  32750688 aaacccttccccaataaaaatttttagttcccccacatgaggaggattttgtattatcaatataaaattaatcccaaaagccctctcctctcaatttatt 32750589  T
Q  110 ctatttcttcca 121  Q
    ||||||||||||    
T  32750588 ctatttcttcca 32750577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 6491418 - 6491476
Alignment:
Q  72 aaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctcct 130  Q
    |||||| ||||  |||||| ||||||| |||||||||||||||||||||| ||||||||    
T  6491418 aaaaatgaacccccaaagccctctcctaccaatttcttctatttcttccacttgctcct 6491476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 1658396 - 1658441
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||||||||||||||| |||||| |||||| |||||||||||||||    
T  1658396 aaaaccctcccctcccttccccttcaaactctcaaacaaagcctta 1658441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 18670986 - 18670905
Alignment:
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| ||||||||||| | ||| || |||||||||||  || || ||||||||| |||||||||||||  ||||||||||||    
T  18670986 tttcctctatttcttcgacttgatcattccttttttccgaagccttcccctcccttcccctccaaactcacaaacaaagcct 18670905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 41923127 - 41923063
Alignment:
Q  108 ttctatttcttccatttgctccttccttttttct-aaaaccctcccctcccatcccctccaaact 171  Q
    |||||||||||||| ||||||||||||||||| | ||||||||| ||| |  |||||||||||||    
T  41923127 ttctatttcttccacttgctccttccttttttttcaaaaccctctccttctttcccctccaaact 41923063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1935132 - 1935178
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttg-agttcccccaaa 46  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  1935132 aaccccccaaagccctcctccaatacaatttttgtagttcccccaaa 1935178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 7398625 - 7398595
Alignment:
Q  159 tcccctccaaactttcaaacaaagccttaga 189  Q
    |||||||||||||||||||||||||||||||    
T  7398625 tcccctccaaactttcaaacaaagccttaga 7398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 9684806 - 9684993
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttc-aaagctctctcctc 99  Q
    |||||||||||||| |||  |||| |||||||| | ||||||||||||||   | |||| ||||||||  | |||||| |  | | |||||  || ||||    
T  9684806 aaccccccaaaaccttccttcaatgcaattttttaattcccccaaatgaggagggttttgtattatga--agaaaattgaaataccaaagccttcccctc 9684903  T
Q  100 ccaatttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
     |||| || |||||||||| || ||||||||||  ||||||| ||| |||||||||||  ||| |||| ||||  |||||||||||||||    
T  9684904 tcaatatcatctatttctttcacttgctccttcaattttttccaaacccctcccctcctttcctctcccaactcacaaacaaagccttag 9684993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 12229616 - 12229674
Alignment:
Q  129 cttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||||||||||| | || |||||||||||| |||||||||||||  |||||| |||||||    
T  12229616 cttccttttttttcaagccctcccctcccctcccctccaaactcccaaacagagcctta 12229674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10955715 - 10955764
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||| ||||| ||||| |||||||||| ||| ||||||||||||||||    
T  10955715 aacccctcaaaatcctcctccaatacaatcttttagttcccccaaatgag 10955764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 15058577 - 15058618
Alignment:
Q  106 tcttctatttcttccatttgctccttccttttttctaaaacc 147  Q
    |||| ||||||||||| |||||||||||||||||| ||||||    
T  15058577 tcttttatttcttccacttgctccttccttttttccaaaacc 15058618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 26018765 - 26018716
Alignment:
Q  94 ctcctcccaatttcttctatttcttccatttgctccttccttttttctaa 143  Q
    ||||| ||||| || ||||||||||||| || ||||||||||||||||||    
T  26018765 ctccttccaatgtcctctatttcttccacttactccttccttttttctaa 26018716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 39549762 - 39549721
Alignment:
Q  147 cctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||| ||||||||||| |||||| ||||||||||||||||    
T  39549762 cctcccttcccatccccttcaaactatcaaacaaagccttag 39549721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 1978160 - 1978116
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttc 140  Q
    ||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  1978160 cctcccaatgtcttctatttcatccacttgctccttccatttttc 1978116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 6632599 - 6632524
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||||||||||| || |||||||||||||| | |||| |||||||||  |  ||||||||||  ||||||||||||    
T  6632599 tctatttcttccacttactccttcctttttt-tcaaactctcccctccattttcctccaaactcgcaaacaaagcct 6632524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 10295710 - 10295758
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagccttagaaaatt 194  Q
    |||||||||||| |||||||||||||  |||||||||||| || |||||    
T  10295710 ccctcccctcccttcccctccaaactcccaaacaaagcctaagcaaatt 10295758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 39550016 - 39550076
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    ||||||||| || ||||||||||| | ||||||||||||||||| | |||| | |||||||    
T  39550016 cctcccaatctcctctatttcttcaacttgctccttccttttttttcaaacacccccctcc 39550076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 27500040 - 27499856
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  27500040 aaccccccaaaaccctcccccgatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 27499941  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||||||||| |||||||||||||||||  |||||||||||||||| |||||| ||||||  ||||||||||||    
T  27499940 caatgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcccctccccttcaaactcccaaacaaagcct 27499856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 188
Target Start/End: Complemental strand, 12293864 - 12293679
Alignment:
Q  3 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctccca 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| || ||| |||||||||||    
T  12293864 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaatttaacctccatagccctctcctccca 12293765  T
Q  103 atttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
     |||||||||||||||||| ||| |||||||||||||| |||||||||||||| | |||||||||||||  |||||||||||||||    
T  12293764 gtttcttctatttcttccacttgatccttccttttttccaaaaccctcccctctcctcccctccaaactcccaaacaaagccttag 12293679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 33991597 - 33991440
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  33991597 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 33991498  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccca 158  Q
    |||| |||||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  33991497 caatgtcttctatttcttccacttgctccttcattttttccaaaaccctcccctccca 33991440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 47905714 - 47905901
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |||||| |||| | |||||||||    
T  47905714 aacccccaaaaaccctcccccaatacaatttttgagttcccccaaatgaggggaattttttattatgagtaaaaaactaacctccaaaaccctctcctcc 47905813  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||| |||||||||||||||| || ||||||||||||||| ||||||||||||| || |||||||||||||  |||||||||||||||    
T  47905814 caatgtcttctatttcttccacttactccttccttttttccaaaaccctccccttccctcccctccaaactcccaaacaaagccttag 47905901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 1688242 - 1688420
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  1688242 aaccccccaaaactctcccccaatacaatttttgagttcccc-aaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 1688340  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||||     |||||||||||||| ||||||||||||    
T  1688341 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccc-----tcccctccaaacttccaaacaaagcct 1688420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 23871488 - 23871643
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||     
T  23871488 aaccccccaaaaccctccgccaatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacttccaaagccctctcctct 23871587  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  23871588 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 23871643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 26757180 - 26757361
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  26757180 aaccccccaaaaacctcccccaatacaatttttgagttaccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 26757279  T
Q  101 caatttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctt 186  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||     |||||||||||||  |||||||||||||    
T  26757280 caatatcttctatttcttccatttgctccttcctttttttccaaaaccctcccc-----tcccctccaaactcccaaacaaagcctt 26757361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 39889683 - 39889853
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  39889683 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaattagggagattttttattatgagtaaaaaattaacctccaaagccctctcctcc 39889782  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaact 171  Q
    |||| |||||||||| ||||| || ||||||||  ||||| ||||||||||||| || |||||||||||||    
T  39889783 caatgtcttctattttttccacttactccttcccattttccaaaaccctccccttccctcccctccaaact 39889853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 185
Target Start/End: Original strand, 51246595 - 51246772
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttc 107  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| || |||||||||| ||    
T  51246595 caaaaccctcctccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctctaaagccctttcctcccaatgtc 51246694  T
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||||||||| || ||||||||| |||||||  ||||||||| |||||| |||||||||||||  ||||||||||||    
T  51246695 ttctatttctttcacttgctcctttctttttttcaaaaccctctcctcccctcccctccaaactcccaaacaaagcct 51246772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 13255400 - 13255250
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  13255400 aaccccccaaaaccctctcccactacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 13255301  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcc 151  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||    
T  13255300 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcc 13255250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 17688393 - 17688213
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaa--aaaattaaccttcaaagctctctcctccc 101  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||||| ||||||||||    
T  17688393 cccccaaaactctcccccaatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaaaattaacctccaaagccctctcctccc 17688294  T
Q  102 aatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||| | |||||||||||||| |||||||||||||||||| ||||||||||||     ||||||||||||| |||||||||| ||||    
T  17688293 aatgttttctatttcttccacttgctccttccttttttccaaaaccctcccc-----tcccctccaaactctcaaacaaagtctta 17688213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 38795026 - 38794842
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||| |||||||||||||||||||| ||||||  |||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  38795026 aacctcccaaaaccctcccccaataaaattttgaagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 38794927  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||| ||||| |||||||||||||||||  |||||||||| ||||| || ||||||||||  ||||||||||||    
T  38794926 caatatcttctattttttccacttgctccttcctttttttcaaaaccctccactcccctcgcctccaaactcccaaacaaagcct 38794842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 7401551 - 7401733
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaa-atgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| || |||| | ||||||||    
T  7401551 aaccccctaaaaccctcccccaatacaatttttgagttccccccatatgagggagattttttattatgagtaaaaaattaatctccaaaaccctctcctc 7401650  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    | ||| | ||||||||||||||  |||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||    
T  7401651 ctaatattttctatttcttccacctgctccttccttttttctaaaaccctcccctcccctcccttccaaactcccaaacaaag 7401733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 187
Target Start/End: Complemental strand, 1523648 - 1523463
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagatttttt-attatgagtaaaaaattaaccttcaaagctctctcctccca 102  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||| | |||||||| |||||||||||||||||||||| || ||| |||||||||||    
T  1523648 cccccaaaaccctctcccaatataatttttgagttcccccaaacgagggggatttttttattatgagtaaaaaattaacctccatagccctctcctccca 1523549  T
Q  103 atttcttctatttcttccatttgctccttcctt-ttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    || ||||||||||||||||  |||||||||||| ||||| |||||||||  ||||||||||||||||||| |||||||||||||||    
T  1523548 atgtcttctatttcttccacctgctccttcctttttttccaaaaccctcatctcccatcccctccaaactctcaaacaaagcctta 1523463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 40707237 - 40707410
Alignment:
Q  17 cccccaatacaatttttgagttcccccaaatgagagagatttttt-attatgagtaaaa-aattaaccttcaaagctctctcctcccaatttcttctatt 114  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||    
T  40707237 cccccaatacaatttttgagttcccccaaatgagagggatttttttattatgagtaaaaaaattaacctccaaagccctctcctcccaatgtcttctatt 40707336  T
Q  115 tcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    ||||||| |||||||||||||||||| ||||| || ||||| | |||||||||||||  |||||||||||||||    
T  40707337 tcttccacttgctccttccttttttccaaaactcttccctctcttcccctccaaactcccaaacaaagccttag 40707410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 30538782 - 30538930
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttct 108  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||    
T  30538782 aaaaccctccctcgatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctccaaaactctctcctcccaatgtct 30538881  T
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    ||||||||||||| || ||||||||||||||| ||||| |||| |||||    
T  30538882 tctatttcttccacttactccttccttttttccaaaacgctcctctccc 30538930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 42488652 - 42488835
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||| |||| | |||||||||    
T  42488652 aaccccacaaaaccctcccccgatacaatttttgagttcccccaaatgagggagattttttatcatcagtaaaaaattaacctccaaaaccctctcctcc 42488751  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    |||| |||||||||||||||| |||||| ||||||||||| ||||||||||||     | |||||||||||  ||||||||||||||||    
T  42488752 caatgtcttctatttcttccacttgctcattccttttttccaaaaccctcccc-----ttccctccaaactcccaaacaaagccttaga 42488835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 43571993 - 43572164
Alignment:
Q  17 cccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttc 116  Q
    ||||||||||||| |||||||||||||||||||  || ||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||    
T  43571993 cccccaatacaatatttgagttcccccaaatgatggaaattttttattatgagtaaaaaattaacctccaaagccctctcct-ccaatgtcttctatttc 43572091  T
Q  117 ttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    ||||| |||||| ||||||||||  ||||| || ||||||| |||||||||||||  ||||||||||||||||    
T  43572092 ttccacttgctcattcctttttttcaaaactctgccctcccctcccctccaaactcccaaacaaagccttaga 43572164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 896520 - 896702
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||  ||||||||    
T  896520 aaccccccaaaaccctcccacaatacaatttttgagttcccccaaatgaaggagattttttactatgagtaaaaaattaacctccaaagccttctcctcc 896619  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||| |||| ||||  ||||| |||||||||| ||||||| |||| |||||||     |||||||||||||  |||||||||||||||    
T  896620 caatatcttttattctttccacttgctccttctttttttccaaaatcctcccc-----tcccctccaaactcccaaacaaagccttag 896702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 2925976 - 2926110
Alignment:
Q  18 ccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttct 117  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| ||||||||||||| |||||||||| |    
T  2925976 ccccaatacaatttttgagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcccaatgtcttctattttt 2926075  T
Q  118 tccatttgctccttccttttttctaaaaccctccc 152  Q
    |||| |||||||||||||||||| |||||||||||    
T  2926076 tccacttgctccttccttttttccaaaaccctccc 2926110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 13061424 - 13061609
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatga----gtaaaaaattaaccttcaaagctctctcctc 99  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||| | |||||||||||| ||    ||||||||||||||| |||||| ||||| ||    
T  13061424 ccccaaaaaccctcccccaatacaatttttgagatcccctaaatgagggggattttttattaggaaggagtaaaaaattaacctccaaagccctctcttc 13061523  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    | ||| ||||| |||||||||| |||||||||||||||||| |||||||| ||||||| ||||||| |||||| ||||||||||||    
T  13061524 cgaatgtcttcaatttcttccacttgctccttccttttttccaaaacccttccctcccctcccctctaaacttccaaacaaagcct 13061609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 26940646 - 26940475
Alignment:
Q  17 cccccaatacaatttttgagttcccccaaatgagagagatttttt-attatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctattt 115  Q
    ||||||||||| ||||||| |||||| ||||||| |  ||||||| |||||||||||||||||||||  | |||||||||||| ||||| ||||||||||    
T  26940646 cccccaatacattttttgaattcccc-aaatgaggggaatttttttattatgagtaaaaaattaacccccgaagctctctccttccaatgtcttctattt 26940548  T
Q  116 cttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||| |||||||||||||||||| |||||||||||||||  ||||||||||||| ||||||||||||||||    
T  26940547 cttccacttgctccttccttttttccaaaaccctcccctcctctcccctccaaactctcaaacaaagccttag 26940475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 50247648 - 50247464
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||   |||||||||||||||||||||||||||||| |||||| ||||||| | ||    
T  50247648 cccccgaaaccctcccccaatacaatctttgagttcccataaatgaggaggattttttattatgagtaaaaaattaacctccaaagccctctccttcgaa 50247549  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    | |||||||||||||||| ||| |||||||||||||||| |||| ||||||||| | |||| ||||||  ||||||||| |||||    
T  50247548 tgtcttctatttcttccacttgttccttccttttttctataaccatcccctccccttcccttcaaactcccaaacaaagtcttag 50247464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 11017651 - 11017485
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| || |||||||||||||||||| |||||||| |||||| || | ||| ||||    
T  11017651 ccccaaaaccctcccctaatacaatttttgagttccccaaaatgagagggaatttttattatgagtaaaatattaacctccaaagcccttttctctcaat 11017552  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaact 171  Q
     || | ||||||||||| |||||||||||||||||| |||| ||| ||||||| |||||||||||||    
T  11017551 gtcatatatttcttccacttgctccttccttttttccaaaatccttccctcccctcccctccaaact 11017485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 42162078 - 42162233
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||| ||||| |||| ||||| ||||||||| |||||||||| | |||||||||||||||||||||||||||||| |||| | ||||||| |    
T  42162078 aaccccccaaaatcctcctccaacacaatatttgagttctcccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctccttc 42162177  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| || ||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  42162178 caatgtcatctatttcttccacttgctccttccttttttccaaaatcctcccctcc 42162233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 15463876 - 15463719
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| |||||||||    
T  15463876 aaccctccataaccctcccccaatacaatttttcagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaagccctctcctcc 15463777  T
Q  101 caatttcttctatttcttccatttgctccttccttttt-tctaaaaccctcccctccc 157  Q
    ||||  ||||||||||||||| |||||  ||||||||| || |||| |||||||||||    
T  15463776 caatgacttctatttcttccacttgcttattcctttttatccaaaatcctcccctccc 15463719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 45565182 - 45564994
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaa---agctctctcctcc 100  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||||||||||||||||||||||| |||   ||| ||||||| |    
T  45565182 cccccaaaaccctcccccaatacaattttttagttcctc-aaatgagggagattttttattatgagtaaaaaattaacctccaaagcagccctctccttc 45565084  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaaa 192  Q
    |||| ||||||||||||||||  | |||| || ||||||||||||||||||||| || |||| ||||||||  |||||||| ||| ||||||    
T  45565083 caatgtcttctatttcttcca-ctactccatctttttttctaaaaccctcccct-ccttcccttccaaactcccaaacaaaacctaagaaaa 45564994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 8156365 - 8156543
Alignment:
Q  3 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaa-gctctctcctccc 101  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||||| |||| || ||||||| ||    
T  8156365 ccccccaaaactctcccccaatacaatttttaagttcccccaaatgagggggattttttattataagtaaaaaattaacctccaaaagccctctccttcc 8156464  T
Q  102 aatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||| | ||||||||||| || ||||||||| |||| ||  ||||||||||||||||     |||||||||  ||||||||||||    
T  8156465 aatgttttctatttctttcacttgctcctttctttctttcaaaaccctcccctccc-----ctccaaactcccaaacaaagcct 8156543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 938279 - 938417
Alignment:
Q  17 cccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttc 116  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||| | |||||||| |||| |||||||||||    
T  938279 cccccaatataatttttgagttcccccaattgagggagattttttattatgagtaaaaaattaacctccaaaaccctctcctctcaatatcttctatttc 938378  T
Q  117 ttccatttgctccttc-cttttttctaaaaccctcccct 154  Q
    ||||| ||| ||||||  ||||||| |||||||||||||    
T  938379 ttccacttgatccttcttttttttccaaaaccctcccct 938417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 32295644 - 32295544
Alignment:
Q  57 tttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||| |||| | ||||||||    
T  32295644 tttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttctttttttccaaaatcttcccctcc 32295545  T
Q  157 c 157  Q
    |    
T  32295544 c 32295544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 39508826 - 39508669
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaatta--accttcaaagctctctcct 98  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||||||||| |||||| ||||| || | ||||||||  |||   |||||  ||||||    
T  39508826 aaccccctaaaaccctcccccaatacaattttttaattcccccaaatgagagggattttgtattaagaattaaaaattaatacccaaaaagccttctcct 39508727  T
Q  99 cccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
      |||| |||||||||||||||| ||| ||| |||| |||||||||||||||||||||    
T  39508726 ttcaatatcttctatttcttccacttgttccatcctcttttctaaaaccctcccctcc 39508669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 50476586 - 50476446
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttct 108  Q
    |||||||||| |||||||||||||||||||||| |||||||| | |||||| |||||||| ||||||| || ||       ||||| || |||||| |||    
T  50476586 aaaaccctcctccaatacaatttttgagttccctcaaatgagggggattttgtattatgaataaaaaaatagcc-------ctctcccc-cccaatgtct 50476495  T
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  50476494 tctatttcttccacttgctccttccttttttccaaaaccctcccctccc 50476446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 2175381 - 2175222
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcc----tcc 100  Q
    ||||||||| ||| |||||||||||||||||||||||  | ||||| | ||||||||||||||||||||||||||||||  ||||| ||||||    |||    
T  2175381 ccccaaaacactcgcccaatacaatttttgagttccc--agatgagggggattttttattatgagtaaaaaattaacctcgaaagccctctccctcctcc 2175284  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatccc 162  Q
    |||| ||||||||||||| || || |||||| ||| |||| |||| ||||||||||| ||||    
T  2175283 caatatcttctatttctttcacttactcctttcttatttccaaaatcctcccctcccctccc 2175222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7964030 - 7963942
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaag 89  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||| ||| |||||    
T  7964030 aaccccccaaaaccctcccccaatacaatttttgagttcctccaaatgagggggattttttactatgagtaaaaaattagcctccaaag 7963942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 47206451 - 47206535
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaa 88  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  47206451 cccccaaaatcttcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaa 47206535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 17556723 - 17556537
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||||   | |||| |||| |||  |||||     ||  |||||| |||||||||    
T  17556723 aaccccccaaaaccctcctccaatagaattttttagttcccccaaatgaggagggttttatattttgaagaaaaataagccccccaaagc-ctctcctcc 17556625  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||| || ||||||||||||| || ||||||||||||||    |||||||||||||| |||||||||||||  |||||||||||||||    
T  17556624 caatgtcctctatttcttccacttactccttcctttttttctgaaccctcccctcccttcccctccaaactcgcaaacaaagccttag 17556537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 36886925 - 36886742
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| |||||||||| ||||| |||||||| |||||||| ||||||| | | |||  ||||||||  ||||  ||||||  |||||| ||| ||||     
T  36886925 aacccccaaaaaccctcctccaatgcaattttttagttccccaaaatgaggggggtttagtattatgaagaaaag-ttaacccccaaagccctcccctct 36886827  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||| ||||||||||||| |||||| |||||||||||  || || ||||||||| |||||||||||||  ||||||||||||    
T  36886826 cattttcctctatttcttccacttgctcattccttttttcccaagccttcccctcccttcccctccaaactcgcaaacaaagcct 36886742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 36269799 - 36269615
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||| |||| |||| |||||||||||||| ||||||||||||||||   | |||| ||||||||  ||||  | | ||  |||||| ||| |||||    
T  36269799 aaccccccgaaactctcctccaatacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcccctcc 36269700  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||  ||||||||||||| |||||| |||||||||||  || || ||||||| | |||||||||||||  ||||||||||||    
T  36269699 catttttctctatttcttccacttgctcattccttttttcccaagccttcccctcacttcccctccaaactcgcaaacaaagcct 36269615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 17675215 - 17675116
Alignment:
Q  40 ccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttcctttttt 139  Q
    ||||||||||| | |||||||||||||||||||||||||||||| |||| |  ||| ||||||||  |||||||||||||||  ||||||||||||||||    
T  17675215 ccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccttcttctcccaatgccttctatttcttccacatgctccttcctttttt 17675116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 52073473 - 52073659
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| |||||||||||| | | |||||||||||||||||||||||||||   | ||||  |||||||  |||||   ||||  ||||||  || ||||     
T  52073473 aaccctccaaaaccctcctctagtacaatttttgagttcccccaaatgaggagggttttgaattatgaagaaaaatgaaaccc-caaagccttcccctct 52073571  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccc-tcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||| || ||||||||||||| |||||||||||||||||   |||||| ||||||||| |||||||||||||  ||||||||||||||    
T  52073572 caatgtcatctatttcttccacttgctccttcctttttttgcaaacccctcccctcccttcccctccaaactcgcaaacaaagcctta 52073659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 14153161 - 14153090
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaatta 79  Q
    |||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  14153161 ccaaaaccctaccccaatacaatttttgagttccct-aaatgagggagattttttattatgagtaaaaaatta 14153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 29092142 - 29091959
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||| |||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  ||||||  |||||| |||  ||||    
T  29092142 aaccccccaaaactctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaag-ttaacccccaaagccctcctctcc 29092044  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||| ||||||||||||| || ||  ||| |||||||  ||||| ||||||||| ||| |||||||||  ||||||||||||    
T  29092043 cattttcctctatttcttccacttacttattcattttttcccaaaccttcccctcccttcctctccaaactcgcaaacaaagcct 29091959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 14152683 - 14152600
Alignment:
Q  74 aaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||| ||||||| || ||||||| ||||||||||||||||    
T  14152683 aaattaacctccaaaaccctctcctcccaatgtcttctatttcttccacttgctccatcattttttccaaaaccctcccctccc 14152600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 49102986 - 49103160
Alignment:
Q  10 aaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttctt 109  Q
    ||||||||| |||||||||||||| ||||||||||||||||   | |||| | || |||  |||||   | ||| |||||| | ||||||||||| || |    
T  49102986 aaaccctcctccaatacaattttttagttcccccaaatgaggagggttttatgttttgaagaaaaataaaccctccaaagccc-ctcctcccaatgtcct 49103084  T
Q  110 ctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||||||||||| || ||||| ||||||||   ||||||||||||||| |||||||||||||  |||||| |||||    
T  49103085 ctatttcttccacttactcctccctttttttccaaaccctcccctcccttcccctccaaactcgcaaacatagcct 49103160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 27255265 - 27255077
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttc-aaagctctctcctc 99  Q
    ||||| ||||||||||||||| ||||| ||||| ||||||  ||||||||   | |||| ||||||||  ||||  ||||||| | ||||| |||  |||    
T  27255265 aaccctccaaaaccctcccccgatacatttttttagttccttcaaatgaggagggttttgtattatgaagaaaag-ttaacctcccaaagccctcctctc 27255167  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    ||| |||| ||||||||||||| |||||| |||||||||||| ||  | ||||||  | |||||||||||||  ||||||||||||||||    
T  27255166 ccattttcctctatttcttccacttgctcattccttttttctcaagtcttcccctttcttcccctccaaactcgcaaacaaagccttaga 27255077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 28773419 - 28773560
Alignment:
Q  17 cccccaatacaatttttgagttccccc-aaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctattt 115  Q
    ||||||||||||||||| ||||||||| |||  || | |||||| |||| ||| ||||| |||||||| || | | ||||||||||||| ||||| ||||    
T  28773419 cccccaatacaattttttagttccccccaaacaagggggattttgtattgtgaataaaagattaacctccataaccctctcctcccaatgtcttcaattt 28773518  T
Q  116 cttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
     |||||  |||| ||| |||||||| ||||||||||||||||    
T  28773519 tttccacatgctactttcttttttccaaaaccctcccctccc 28773560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 39179253 - 39179317
Alignment:
Q  123 ttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||||||    
T  39179253 ttgctccttccttttttccaaaaccctcccctcccttcccctccaaactcccaaacaaagcctta 39179317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 5584557 - 5584422
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    |||||||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  |||||| |||  |||||| |    
T  5584557 ccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccatt 5584458  T
Q  105 ttcttctatttcttccatttgctccttccttttttc 140  Q
    ||||||||||||||||| |||||| |||||||||||    
T  5584457 ttcttctatttcttccacttgctcattccttttttc 5584422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 50587009 - 50586920
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||| || ||||||||||||| |||||||||||||||||| ||| | |||| ||||| |||||||||||||| ||||||| ||||    
T  50587009 cctctcaatgtcctctatttcttccacttgctccttccttttttccaaagctctcctctcccttcccctccaaacttgcaaacaaggcct 50586920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 34918811 - 34918894
Alignment:
Q  56 ttttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttcctttttt 139  Q
    ||||||||||||| || |||||||||| |||||| | | |||||||||| |||| ||||||||||| |||||| ||||||||||    
T  34918811 ttttttattatgaatagaaaattaaccctcaaagttatttcctcccaatgtcttatatttcttccaattgctcattcctttttt 34918894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 183
Target Start/End: Complemental strand, 28748237 - 28748079
Alignment:
Q  20 ccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttc 119  Q
    |||||||||||||| |||||||    ||||| |||||||| |||||| | ||||||| |||||| |||| |  ||||||| |||| ||||||||||||||    
T  28748237 ccaatacaatttttaagttcccaagtatgagggagattttgtattataaataaaaaaataacct-caaatccttctcctctcaatgtcttctatttcttc 28748139  T
Q  120 catttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    || ||| | |||| |||||||| |||     ||||| |||||||||||||||  ||||||||||    
T  28748138 cagttgtttcttcattttttctcaaa----accctctcatcccctccaaactcacaaacaaagc 28748079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 52068162 - 52068335
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatga-gagagattttttattatgagtaaaaaattaa----ccttcaaagctctct 95  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||| ||||| |||| ||||||||   |||| ||||    ||  |||||| |||     
T  52068162 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagag-ttttgtattatga-agaaaagttaacccccccccaaagccctcc 52068259  T
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaact 171  Q
     |||||| |||| |||||||||||||||| ||  || ||||||||| || || ||||||||  |||||||||||||    
T  52068260 tctcccattttcctctatttcttccatttacttatttcttttttctcaagccttcccctccattcccctccaaact 52068335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 34154353 - 34154537
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| ||||||||| || |||||||||||||| |||||| |||||||||  || |||| ||||||||  ||||  | | ||  |||||| |||  ||      
T  34154353 aaccctccaaaacccccctccaatacaattttttagttcctccaaatgaggaaggttttgtattatgaagaaaagttaaccccccaaagccctcatcttt 34154452  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||| ||||||||||||| || ||  |||||||||||  || || || |||||| |||||||||||||  ||||||||||||    
T  34154453 cattttcctctatttcttccacttacttattccttttttcccaagccttctcctcccttcccctccaaactcgcaaacaaagcct 34154537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 7915569 - 7915414
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||| ||||||||||||| |||||||||||||||| | |||| |||||||   | || | ||||||||  |||||   | ||  |||||| |||  ||||    
T  7915569 aacctcccaaaaccctcctccaatacaatttttgaatcccccaaaatgaggagggttctatattatgaagaaaaatgaaccccccaaagccctcctctcc 7915470  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||  |  ||||||| ||||| |||||||||||||||||| |||||||||||||||    
T  7915469 caaagttctctattttttccacttgctccttccttttttcaaaaaccctcccctcc 7915414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 17760500 - 17760687
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| ||||||||| || |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  ||||||||||  ||||    
T  17760500 aaccctccaaaacccccctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcc 17760599  T
Q  101 caatttcttctatttcttccatttgctccttccttttt-tctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    || |||| ||||||||||||| |||||  ||| ||||| ||  || || ||||||||| |||||||||| ||  ||||||||| ||||    
T  17760600 cattttcctctatttcttccacttgcttattcttttttatcccaagccttcccctcccttcccctccaagctcgcaaacaaaggctta 17760687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 28718911 - 28718998
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    ||||||||| || ||||||||||||| ||||| ||||| ||||||| |||||||||| ||||  |||||||||||||  |||||||||    
T  28718911 cctcccaatatcctctatttcttccacttgcttcttcctttttttccaaaaccctccactcctttcccctccaaactcgcaaacaaag 28718998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 28848820 - 28848863
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  28848820 ccaaaaccctcctccaatacaatttttgagttcccccaaatgag 28848863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30543378 - 30543445
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatga 68  Q
    ||||| ||||||||||||  |||||||||||||||||||||||| |||||  ||||||| ||||||||    
T  30543378 aaccctccaaaaccctccagcaatacaatttttgagttcccccacatgaggaagattttgtattatga 30543445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 32299148 - 32299086
Alignment:
Q  3 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttatta 65  Q
    ||||||||| |||| |  |||||||||||||||||||||||||||||| | ||||||||||||    
T  32299148 ccccccaaaccccttcgtcaatacaatttttgagttcccccaaatgagggggattttttatta 32299086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2909174 - 2909125
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  2909174 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgag 2909125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 46001622 - 46001471
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||| |||| | |||||||||||| |||||| |||||||||   | |||| ||||||||   |||| ||||||| |||| | |||  ||||    
T  46001622 aaccccccaaaactctcctcaaatacaattttttagttcctccaaatgaggagggttttatattatga-agaaaagttaacctccaaaaccctcctctcc 46001524  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccc 153  Q
    || |||| ||||||||||||| || ||  |||||||||||  ||||| |||||    
T  46001523 cattttcctctatttcttccacttacttattccttttttcccaaaccttcccc 46001471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 41432791 - 41432984
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||||||||   | |||| ||||||||  |||||   ||||  ||||||  || |||      
T  41432791 aaccccccaaaaccctcctccaatacaaattttgag-tcccccaaatgaggagggttttatattatgaagaaaaatgaaacccccaaagccttcccct-- 41432887  T
Q  101 caatttcttctatttcttccatttgctccttcctt--ttttctaaaa------ccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    |||| || | ||||||||||| |||||||||||||  |||| | |||      ||||||| |||| |||||||||||||  ||||||||||||||||    
T  41432888 caatgtcatatatttcttccacttgctccttcctttattttttcaaacccctcccctcccttcccttcccctccaaactcgcaaacaaagccttaga 41432984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 9595781 - 9595827
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||    
T  9595781 aaaaccctcccctcccttcccctccaaactcccaaacaaagccttag 9595827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 45565349 - 45565395
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||    
T  45565349 aaaaccctcccctcccttcccctccaaactcgcaaacaaagccttag 45565395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 13061257 - 13061212
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||||||||||||||| |||||||||||||| |||||||| |||||    
T  13061257 aaaaccctcccctcccttcccctccaaacttccaaacaaaacctta 13061212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 27102869 - 27102987
Alignment:
Q  21 caatacaatttttgagttcccccaaatgagagag-attttttattatgagtaaaaaattaacct-tcaaagctctctcctcccaatttcttctatttctt 118  Q
    |||||||||||||||||| |||||||||| |||| ||||| ||||||||   |||||| |||||  |||||| ||| ||||| ||| |||||||||||||    
T  27102869 caatacaatttttgagtttccccaaatga-agagcattttgtattatga-agaaaaatgaacctcccaaagcactcccctccaaatatcttctatttctt 27102966  T
Q  119 ccatttgctccttcctttttt 139  Q
     || |||||| ||| ||||||    
T  27102967 tcacttgctcattcttttttt 27102987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 41817328 - 41817372
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatga 49  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||    
T  41817328 ccccaaaaccctcctccaatacaattttttagttcctccaaatga 41817372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 34750037 - 34750076
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaat 47  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  34750037 caaaatcctccaccaatacaatttttgagttcccccaaat 34750076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 37649649 - 37649827
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaac-cttcaaagctctctcctcccaatttc 107  Q
    |||||||||| |||||||||||||| |||||| |||||||||   | |||| |||||| |   |||| ||||| |  |||||| |||  |||||| ||||    
T  37649649 aaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattat-aaagaaaagttaacaccccaaagccctcctctcccattttc 37649747  T
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
     ||||||||||||| || ||  ||| |||||||  || || || |||||  |||||||||||||  ||||||||||||||    
T  37649748 ctctatttcttccacttacttattcattttttcccaagccttctcctccattcccctccaaactcgcaaacaaagcctta 37649827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 5970526 - 5970612
Alignment:
Q  72 aaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccca 158  Q
    |||||||||||  |||||| ||| ||||| ||| |  ||||||||||| | || ||||||||||||||  |||||||||| ||||||    
T  5970526 aaaaattaacccccaaagccctcccctcctaatgtactctatttcttcaacttactccttcctttttttcaaaaccctcctctccca 5970612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15426287 - 15426329
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttccccc 43  Q
    ||||||||||||| || | ||||||||||||||||||||||||    
T  15426287 aaccccccaaaactcttctccaatacaatttttgagttccccc 15426329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 32299327 - 32299369
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||| |||||||||||||  |||||||||||||||    
T  32299327 ccctcccctcccttcccctccaaactcccaaacaaagccttag 32299369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 32300279 - 32300321
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||| |||||||||||||  |||||||||||||||    
T  32300279 ccctcccctcccttcccctccaaactcccaaacaaagccttag 32300321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 36944791 - 36944861
Alignment:
Q  86 aaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    ||||||||||| || |||| |||||||||||||| |||| || | ||  |||||| |||||||||||||||    
T  36944791 aaagctctctcatctcaatgtcttctatttcttctatttacttcatcgatttttcgaaaaccctcccctcc 36944861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 50402768 - 50402671
Alignment:
Q  54 gattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctccc 152  Q
    ||||||||||||| |  |||||||||||||  |||||||||| ||||| || ||||| |||||||  |||| || |||||||||||  ||||| |||||    
T  50402768 gattttttattataaacaaaaaattaacctcaaaagctctcttctcccgatgtcttcgatttctt-tatttacttcttcctttttttcaaaactctccc 50402671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 25708500 - 25708576
Alignment:
Q  111 tatttcttccatttgctccttccttttt-tctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||||||||||| || ||||||||||||| |||||| |||||||||||| |||||||  ||||  |||||||| |||||    
T  25708500 tatttcttccacttactccttcctttttatctaaa-ccctcccctcccttcccctcataactcgcaaacaaaacctta 25708576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 38795462 - 38795543
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaa 190  Q
    ||||||||||||| |||||| |||||||||||| ||  | |||| | || || |||| |||||  |||||||||||||||||    
T  38795462 tctatttcttccacttgctcattccttttttctcaagtcttccctttccttctcctctaaactcgcaaacaaagccttagaa 38795543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 41428022 - 41428129
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagatt-ttttattatgagtaaaaaattaaccttcaaagctctctcctccca 102  Q
    ||||||||| ||||| |||||| |||||||||||| ||||||||||| |||||| ||| |||||||  ||||| | | |||||||| ||||| | |||||    
T  41428022 cccccaaaatcctcctccaatataatttttgagtt-ccccaaatgag-gagattctttcattatgaagaaaaattaacccttcaaaactctcccatccca 41428119  T
Q  103 atttcttcta 112  Q
     |||| ||||    
T  41428120 ctttcctcta 41428129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 50247816 - 50247865
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaa 191  Q
    |||||||||||||||| |||||||||||||  |||| ||||||| |||||    
T  50247816 aaaaccctcccctcccttcccctccaaactcccaaagaaagcctaagaaa 50247865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 51303201 - 51303250
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||| ||||||||||| | ||| ||||||||||||||| |||||||||    
T  51303201 aacccctcaaaaccctcctcaaatgcaatttttgagttccaccaaatgag 51303250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 25033436 - 25033249
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||    
T  25033436 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgaggatgattttttattatgagtaaaaaattaacctccaaagctctctcctcc 25033337  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    | || |||||||||||||||| || |||||||||||||||||||| ||||||||||| |||  ||||||||| |||| ||||||||||    
T  25033336 cgatgtcttctatttcttccacttactccttccttttttctaaaatcctcccctcccctccattccaaacttccaaaaaaagccttag 25033249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 6875 - 6691
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagatttttt-attatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||    
T  6875 aacccctcaaaaccctcccccaatacaatttttgagtttccccaaatgagggagatttttttattatgagtaaaaaattaacctccaaagctctctcctc 6776  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcc 184  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||||||||||  |||||||||||    
T  6775 ccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctatcctccaaactcccaaacaaagcc 6691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 36906243 - 36906087
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||| |||||| |||||||||    
T  36906243 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattacgagtaaaaaattaacctccaaagccctctcctcc 36906144  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  36906143 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctccc 36906087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 34272571 - 34272379
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |||||||| |||||| ||||||||     
T  34272571 aaccccccaaaaccttcccccaatacaatttttgagtttccccaaatgagggggattttttattatgagtaaaagattaacctccaaagccctctcctct 34272472  T
Q  101 caatttcttctatttcttccatttgctccttcctt-ttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaaa 192  Q
    |||| |||||||||||||||| ||||||||||||| ||||| |||| ||||||||||| |||||| ||||||  |||||||||||| ||||||    
T  34272471 caatgtcttctatttcttccacttgctccttcctttttttccaaaatcctcccctcccttccccttcaaactcccaaacaaagcctaagaaaa 34272379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 4 - 181
Target Start/End: Original strand, 37659559 - 37659736
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||||||    
T  37659559 cccccaaaacccttccccaatacaatttttgagttcccctaaatgagagggattttttattattagtaaaaaattaacatccaaagccctctcctcccaa 37659658  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
    | |||||||||||||||| |  ||||||||||||||| |||||||||||||||| |||||| ||||||  ||||||||    
T  37659659 tgtcttctatttcttccactcactccttccttttttccaaaaccctcccctcccttccccttcaaactcccaaacaaa 37659736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 3404599 - 3404785
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||| |||| ||||| |||||| ||||||||| ||||||| |||||||||||||| |||||||||||||| || ||||||  ||||||||    
T  3404599 aaccccccaaaaccatcccacaatataattttcgagttcccc-aaatgagggagattttttattaagagtaaaaaattaatctccaaagccttctcctcc 3404697  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
     ||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||    
T  3404698 taatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagccttag 3404785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 36102915 - 36103095
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||||||| |||||| |||||| ||    
T  36102915 aaccccccaaaaccctcccgcaatacaaattttgagttcctccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctccacc 36103014  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
    |||| ||||||||||||||||  | ||||||||||||||  |||| ||||||||||| || ||||||||||| ||||||||    
T  36103015 caatgtcttctatttcttccacctactccttcctttttttcaaaatcctcccctcccctctcctccaaacttccaaacaaa 36103095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 34304767 - 34304616
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| ||  |||    
T  34304767 ccccaaaaccctcccctaatacaatttttgagttcccccaaatgaggg-gattttttattatgagtaaaaaattaaccttcaaagccctctcatcttaat 34304669  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
     |||||||||||||||| |||||||||||||||||| |||| | |||||||||    
T  34304668 gtcttctatttcttccacttgctccttccttttttccaaaatcttcccctccc 34304616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 13865117 - 13865271
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||||||||||||||||||||||||||||  || ||||||    
T  13865117 aaccccccaaaaccctcccccaatacaatttttgagttcccc-aaataagggggattttttattatgagtaaaaaattaaccttcaaagtcctttcctcc 13865215  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
     ||| |||||||||||||||| |||||||||| ||||||| |||| ||||||||||    
T  13865216 gaatgtcttctatttcttccacttgctccttcattttttccaaaatcctcccctcc 13865271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 29612047 - 29611893
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||    
T  29612047 aaccccccaaaaccctcacccaatacaattttttaattcccccaaatgagag-gattttttattatgagtaaaaaattaacctccaaagccctctcctcc 29611949  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||| ||||||||||| |||||| || |||||| | |||||||||||||||    
T  29611948 caatgtcttatatttcttccacttgctcatttctttttccaaaaaccctcccctcc 29611893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 4734521 - 4734677
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||  |||||||| || |||| ||| |||||| |||||||||||||||  ||||||||||||||||||||||||||||| |||| | |||||||||    
T  4734521 aaccccctgaaaccctctcctaatataatatttgaggtcccccaaatgagaggaattttttattatgagtaaaaaattaacctccaaaaccctctcctcc 4734620  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  4734621 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctccc 4734677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 31297373 - 31297527
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||||||||||| |||||||| |||||||     |||||||||||||||||||||||||||||||||||  ||||||||    
T  31297373 aaccccccaaaaccctcctccaatacaattttttagttcccc-aaatgaggttttttttttattatgagtaaaaaattaaccttcaaagccatctcctcc 31297471  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| |||||||||| ||||||| |||||||||| ||||    
T  31297472 caatgtcttctatttcttccacttgctccttcattttttccaaaaccctcctctcc 31297527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 2474794 - 2474947
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||||||| |||||| ||||||||||||| ||||| ||||||||||   ||||||||||||||||||||||||||| || |||| | ||||||||||||    
T  2474794 cccccaaaatcctcccacaatacaatttttaagttctcccaaatgaggaggattttttattatgagtaaaaaattaatctccaaaaccctctcctcccaa 2474893  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    | |||||||||||||||| || ||||||||||||||  |||| |||||||||||    
T  2474894 tgtcttctatttcttccacttactccttcctttttttcaaaatcctcccctccc 2474947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 1942124 - 1942244
Alignment:
Q  67 gagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctcc 166  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||    
T  1942124 gagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgatccttccttttttc-aaaaccctcccctcccttcccctcc 1942222  T
Q  167 aaactttcaaacaaagccttag 188  Q
    |||||   ||||||||||||||    
T  1942223 aaactcctaaacaaagccttag 1942244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 43733153 - 43733328
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttct 108  Q
    |||||||||| |||||||||||||| | ||||| ||||||||   |||||| |||||||| |||||| ||||||   ||||| ||||||| ||||| |||    
T  43733153 aaaaccctcctccaatacaattttttaattccctcaaatgaggaggattttgtattatgaataaaaagttaacccctaaagccctctccttccaatgtct 43733252  T
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcc 184  Q
    ||||||||||||  |||||| |||| |||||| |||||||||||||  | |||||||||||||  |||||||||||    
T  43733253 tctatttcttcctcttgctcattccctttttccaaaaccctcccctttcctcccctccaaactcccaaacaaagcc 43733328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 21173883 - 21174068
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||| ||||||| |||||| |||||||||   | |||| ||||||||   |||| ||||||  |||||| |||  ||||    
T  21173883 aaccccccaaaaccctcctccaatataattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcc 21173981  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    || |||||||||||||||||| |||||| |||||||||||  || |  ||||||||| ||| |||||||||  ||||||||||||||    
T  21173982 cattttcttctatttcttccacttgctcattccttttttcctaagcattcccctcccttccactccaaactcgcaaacaaagcctta 21174068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 186
Target Start/End: Original strand, 79644 - 79824
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaattt 106  Q
    |||||||||||| |||||||||||||| ||||||||||||||||   | |||  ||||||||  ||||  | | ||  |||||| ||| ||||||| |||    
T  79644 ccaaaaccctcctccaatacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaacgtaaccccccaaagccctcccctcccatttt 79743  T
Q  107 cttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctt 186  Q
    | ||||||||||||| |||||| |||| |||||||  || || ||||||||| |||||||||||||  |||||||||||||    
T  79744 cctctatttcttccacttgctcgttcctttttttcccaagccttcccctcccttcccctccaaactcgcaaacaaagcctt 79824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 34349771 - 34349593
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||| |||| ||||||| |||||||| |||||||||         |||||||||||||||||||| | |||||| ||||| |||    
T  34349771 aaccccccaaaaccctccccaaatataatttttaagttcccc-aaatgagagg--------attatgagtaaaaaattaacatccaaagccctctcatcc 34349681  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccct--cccatcccctccaaactttcaaacaaagcctta 187  Q
    |||| | || |||||||| || |||||||||| ||||||  |||||||||||||  ||| |||||||||||||  |||||||| |||||    
T  34349680 caatgttttttatttctt-cacttgctccttcttttttttcaaaaccctcccctcccccctcccctccaaactcccaaacaaaacctta 34349593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 39193987 - 39193836
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttt-tattatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    ||||||| |||||||||| ||||||||| |||| ||||||||||||||| ||||  |||| ||||||||  ||||| | | ||  |||||| ||| ||||    
T  39193987 aacccccaaaaaccctcctccaatacaactttttagttcccccaaatga-agagggttttatattatgaagaaaaattaaccccccaaagccctcccctc 39193889  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctccc 152  Q
    ||||| |  ||||||||||||| ||||| |||||||||||| |||||||||||    
T  39193888 ccaatgtactctatttcttccacttgctacttccttttttccaaaaccctccc 39193836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 40985099 - 40985173
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaa 75  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||   |||||| |||||||| ||||||    
T  40985099 aacccctcaaaaccctcctccaatacaatttttgagttcccccaaatgaggaggattttgtattatgaataaaaa 40985173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 23932583 - 23932766
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||| ||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||   |||| ||||||  |||||| |||  |||     
T  23932583 aaccccccaaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctct 23932681  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||| ||||||||||||| ||  |  |||||||||||  || || |||| |||| |||||||||||||  ||||||||||||    
T  23932682 cattttcctctatttcttccacttatttattccttttttcccaagccttcccttcccttcccctccaaactcgcaaacaaagcct 23932766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 1839845 - 1840031
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||   | |||| |||| |||  |||||     ||| |||||| | ||| |||    
T  1839845 aaccccccaaaaccctcctccaatacaatttttaagttcccccaaatgaggagggttttatattttgaagaaaaataagccctccaaagc-ccctcttcc 1839943  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||| || ||||||||||||| || ||||||||| ||||   || || | || | || |||||||||||||  |||||||||||||||    
T  1839944 caatgtcctctatttcttccacttactccttcctatttttccaagcctttcctttccttcccctccaaactcgcaaacaaagccttag 1840031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 26772667 - 26772850
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatga-gagagattttttattatgagtaaaaaattaaccttc-aaagctctctcct 98  Q
    ||||| |||||||||||  |||||||||||||| ||||||  ||||||| ||| | |||| ||||||||  ||||  ||||||| | ||||| |||  ||    
T  26772667 aaccctccaaaaccctcatccaatacaattttttagttccttcaaatgatgaggg-ttttgtattatgaagaaaag-ttaacctcccaaagc-ctcctct 26772763  T
Q  99 cccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||||||||||| |||||| |||||||||||  || || ||| ||||| | |||||||||||  ||||||||||||    
T  26772764 cccattttcttctatttcttccacttgctcattccttttttcctaagccttcctctccctttccctccaaactcgcaaacaaagcct 26772850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 40999247 - 40999380
Alignment:
Q  55 attttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccct 154  Q
    ||||| |||||||| ||| ||||||| || |||| |||||||||| |||| ||||||||||||| |||||| |  ||| |||| || ||||||||| | |    
T  40999247 attttgtattatgaataataaattaatctccaaaactctctcctctcaatgtcttctatttctttcatttg-ttgttcattttctccaaaaccctctcat 40999345  T
Q  155 cccatcccctccaaactttcaaacaaagccttaga 189  Q
    | | |||||||||||||  |||||||||| |||||    
T  40999346 ctcctcccctccaaactcccaaacaaagctttaga 40999380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1942078 - 1942119
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1942078 aaccccccaaaaccctcccccaatacaatttttgagttcccc 1942119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 35376681 - 35376809
Alignment:
Q  29 tttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctc 128  Q
    ||||| ||||||||||||||||  ||||||| ||| ||||  |||||   | ||  |||||||||| |||  |||| || | |||||| |||| |||||     
T  35376681 tttttcagttcccccaaatgaggaagattttgtatcatgaagaaaaatgaaccccccaaagctctcccctttcaatgtcctttatttcgtccacttgctt 35376780  T
Q  129 cttccttttttctaaaaccctcccctccc 157  Q
    |||||||||| ||||||||||||||||||    
T  35376781 cttcctttttcctaaaaccctcccctccc 35376809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 28169920 - 28169794
Alignment:
Q  14 cctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctat 113  Q
    ||||| |||||||| ||||||||||||||||||| |||  |||||| ||||||||  |||||   ||||||| || | ||  | ||||||  ||||||||    
T  28169920 cctcctccaatacattttttgagttcccccaaattagaaggattttgtattatgaagaaaaatgaaaccttccaaaccctaccatcccaaagtcttctat 28169821  T
Q  114 ttcttccatttgctccttccttttttc 140  Q
    |  ||||| || |||||||||||||||    
T  28169820 tctttccacttcctccttccttttttc 28169794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 34148441 - 34148395
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||    
T  34148441 aaaaccctcccctcccttcccctccaaactcccaaacaaagccttag 34148395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 31149872 - 31149799
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    ||||||||||||| |||||| ||| | ||||| ||||| |||| ||||| |||||||||||||  |||||||||    
T  31149872 tctatttcttccacttgctcattcatgttttccaaaacactccactcccttcccctccaaactcgcaaacaaag 31149799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 1840341 - 1840385
Alignment:
Q  112 atttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||    
T  1840341 atttcttccacttgctccttccttttttccaaacccctcccctcc 1840385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 3635611 - 3635683
Alignment:
Q  111 tatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    |||||||| || |||||| || |||||||| ||||||||| | |||| |||||||||||||  ||||||||||    
T  3635611 tatttctttcacttgctcatttcttttttccaaaaccctctcatcccttcccctccaaactcgcaaacaaagc 3635683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 4074854 - 4074894
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagcctt 186  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  4074854 ccctcccctcccctcccctccaaactctcaaacaaagcctt 4074894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 14581875 - 14581963
Alignment:
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaaa 192  Q
    |||| ||||||||||||  |||||| |||||||||||  || || ||||||||  |||||| ||||||  |||||||||||| ||||||    
T  14581875 tttcctctatttcttccggttgctcattccttttttcccaagccttcccctcctttcccctgcaaactcgcaaacaaagcctaagaaaa 14581963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 34148595 - 34148665
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaa 76  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||| || ||||||||||||||||| |||||||    
T  34148595 cccccaaaaacctcctccaatataatttttgagtt-ccctaaataag-gagattttttattatgactaaaaaa 34148665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 4166762 - 4166849
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttctaaaac-cctcccctcccatcccctccaaactttcaaacaaag 182  Q
    ||||||||| || ||  |||||||||||||||||||||||||| | ||||| | || ||| ||||||||| ||||||  |||||||||    
T  4166762 cctcccaatgtcctcgctttcttccatttgctccttcctttttcccaaaactcttctccttccatccccttcaaactcacaaacaaag 4166849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 6839823 - 6839945
Alignment:
Q  16 tcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctattt 115  Q
    ||||| ||||| ||||||| || ||| |||||||| |  ||||| |||||||| ||||||||||||||  |||  |||||| || || | ||||||||||    
T  6839823 tcccctaatacgatttttgtgt-ccctcaaatgaggggaattttatattatgaataaaaaattaacctctaaaaatctctcatctcagtgtcttctattt 6839921  T
Q  116 cttccatttgctccttcctttttt 139  Q
    |||  | |||||| ||||||||||    
T  6839922 cttttacttgctcattcctttttt 6839945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 13864956 - 13864910
Alignment:
Q  139 tctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||||| |||||||||||  |||| ||||||||||||||||||||||    
T  13864956 tctaaagccctcccctcctttcccatccaaactttcaaacaaagcct 13864910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 36906413 - 36906459
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagccttagaaaa 192  Q
    |||||||||||| |||||||||||||  |||||||||||||| ||||    
T  36906413 ccctcccctcccttcccctccaaactcccaaacaaagccttaaaaaa 36906459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 37388309 - 37388264
Alignment:
Q  20 ccaatacaatttttgagttcccccaaatgagagagattttttattat 66  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||    
T  37388309 ccaatacaatttttgagt-cccccaaatgaaaaagattttttattat 37388264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 37659390 - 37659348
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||| ||||||||||| | ||||||||||||||||    
T  37659390 ccctcccctcccttcccctccaaattctcaaacaaagccttag 37659348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 6943534 - 6943638
Alignment:
Q  77 ttaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaa 176  Q
    ||||||||||||||  || ||| ||| |||| ||||||||||||| |||||| ||| |||||||  ||| | ||| ||||| ||| || ||||||  |||    
T  6943534 ttaaccttcaaagccatcaccttccattttcctctatttcttccaattgctcattctttttttcccaaatcttcctctcccttcctcttcaaactcgcaa 6943633  T
Q  177 acaaa 181  Q
    |||||    
T  6943634 acaaa 6943638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 8228482 - 8228406
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||||||||||| |||||| |||||||||||| || |  ||||||||  |||  ||||||||  ||||||||||||    
T  8228482 tctatttcttccacttgctcattccttttttctcaagcattcccctccattcctttccaaactcgcaaacaaagcct 8228406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 13227941 - 13227981
Alignment:
Q  148 ctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||| ||||||||||||| ||||||| ||||||||    
T  13227941 ctcccctcccctcccctccaaactctcaaacagagccttag 13227981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 21262731 - 21262791
Alignment:
Q  132 ccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaaa 192  Q
    ||||||||| ||| ||||||  |||| |||||||||||||  |||||||||||| ||||||    
T  21262731 ccttttttccaaagccctcctttcccttcccctccaaactcgcaaacaaagcctaagaaaa 21262791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 36837601 - 36837677
Alignment:
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaa 180  Q
    |||| ||||||||||||| ||  |  |||||||||||| ||||| ||||||| | |||||||||||||  |||||||    
T  36837601 tttcctctatttcttccacttatttattccttttttctcaaaccttcccctctcttcccctccaaactcacaaacaa 36837677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 39418105 - 39418065
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaat 47  Q
    |||||||||||| | ||||||||||||||||||| ||||||    
T  39418105 ccaaaaccctcctctaatacaatttttgagttcctccaaat 39418065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 47789471 - 47789658
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |   ||||||||||||||||||| |||||||| |||||||||||||||     
T  47789471 aaccccccaaaaccctcccccaatacaatttttgagttcccccagatgaggggatttttttattatgagtaaaagattaacctccaaagctctctcctct 47789570  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||||    
T  47789571 caatgtcttctatttcttccacttgctccttccttttttctacaaccctcccctcccttcccctccaaactcccaaacaaagccttag 47789658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 30131911 - 30132094
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||| |||||| |||||||||    
T  30131911 aaccccccaaaaccctcccccaatacaatttttgagtttccccagatgagggaaattttttattatgagtaaaaaattaacctccaaagccctctcctcc 30132010  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||||||||| ||||||||||||||||||  ||||||||||||||| ||||||||||| |  ||||||||||||    
T  30132011 caatgtcttctatttcttccacttgctccttccttttttc-gaaaccctcccctcccctcccctccaaattcccaaacaaagcct 30132094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 24242117 - 24242272
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||  |||||||||    
T  24242117 aacccaccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcctcc 24242216  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  24242217 caatatcttctatttcttccacttgctccttccttttttctaaaatcctcccctcc 24242272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 36796479 - 36796324
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||  |||||||||    
T  36796479 aaccccccaaaagcctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaaccttcatagtcctctcctcc 36796380  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  36796379 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 36796324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 43237346 - 43237192
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||| |||||| |||||||||    
T  43237346 aaccccccaaaaccctcccccaatacaattgttgagttcccccaaatgaggg-gattttttattatgcgtaaaaaattaacctccaaagccctctcctcc 43237248  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43237247 caatgtcttctatttcttccacttgctccttccttttttctaaaaccctcccctcc 43237192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 47714698 - 47714862
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||| |    
T  47714698 aaccctccaaaaccctcccccaatacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaaagccctctccttc 47714796  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctcc 166  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||||||    
T  47714797 caatgtcttctatttcttccacttgctccttccttttttctcaaactctcccctcccctcccctcc 47714862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 41962002 - 41962155
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||  ||||||||||||||||| |||||| |||||||||    
T  41962002 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttatt--gagtaaaaaattaacctccaaagccctctcctcc 41962099  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  41962100 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 41962155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 38526209 - 38526026
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||| ||||||| |    
T  38526209 aaccccccaaaaccctctcccaatacaatttttgagttcccccaaatgagggagattttatattatgagaaaaaaattaacctccaaagccctctccttc 38526110  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    |||| |||||||||||||||| || || |||||||||||| ||||| ||||||     ||||||||||||| |||||||||||||||||    
T  38526109 caatgtcttctatttcttccacttacttcttccttttttccaaaactctcccc-----tcccctccaaactctcaaacaaagccttaga 38526026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3043143 - 3043298
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| |||||  |||||||||    
T  3043143 aacctcccaaaaccctcccccaatacaatttttgagttcccccaaatcagggggattttttattatgagtaaaaaattaacctccaaaggcctctcctcc 3043242  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  3043243 caatgtcttctatttcttccacttgctccttccttttttccaaaatcctcccctcc 3043298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 49860892 - 49860722
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||||| | ||||| |||||||||||||||||||||||| |||||| |||||||||    
T  49860892 aaccccccaaaacccccgcccaatacaattttttagttcccccaaatgagggggatttgttattatgagtaaaaaattaacctccaaagccctctcctcc 49860793  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaact 171  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||| |||||   |||||||||||||    
T  49860792 caatgtcttctatttcttccaattgctccttccttttttccaaaacccttccctcatctcccctccaaact 49860722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 46312454 - 46312602
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttct 108  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||| |||||| ||||||||||||| |||    
T  46312454 aaaaccctcccccaatacaatttttgagttcccccaaatgaggaagatttttcattatgagtaaaaaattaacctccaaagccctctcctcccaatgtct 46312553  T
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    ||||||||||||| ||  |||||||||||||| ||||||||||||||||    
T  46312554 tctatttcttccacttagtccttccttttttccaaaaccctcccctccc 46312602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49683027 - 49683181
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  49683027 aacctcccaaaaccctcccc-aatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 49683125  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
     ||| |||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  49683126 taatgtcttctattttttccacttgctcattccttttttctaaaaccctcccctcc 49683181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 39499254 - 39499065
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| |||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  39499254 aaccccctaaaatcctcccccaatacaatttttgagtttccctaaatgagggagattttttattatgagtaaaaaattaacctccaaagccctctcctcc 39499155  T
Q  101 caatttcttctat---ttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||| ||||||||   |||||||| |||||||||||||||||  |||||| | ||||||  |||| ||||||||  ||||||||||||||    
T  39499154 caatatcttctatatcttcttccacttgctccttcctttttttaaaaacctttccctcctctcccttccaaactcccaaacaaagcctta 39499065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 185
Target Start/End: Complemental strand, 45555687 - 45555509
Alignment:
Q  3 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctccca 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| || || ||||     
T  45555687 ccccccaaaaccctcccacaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctgtcttcccg 45555588  T
Q  103 atttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||||||||||||||| ||||||||||| ||||||| ||||     |||||||||||||||||||||  ||||||||||||    
T  45555587 atgtcttctatttcttccacttgctccttccattttttccaaaa-----ccctcccatcccctccaaactcccaaacaaagcct 45555509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 55439640 - 55439485
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| |||||  |||||||||    
T  55439640 aaccccccaaaaccatcccctaatacaatttttgagttcctccaaatgagggggattttttattatgagtaaaaaattaacctccaaagtcctctcctcc 55439541  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| || ||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  55439540 caatgtcctctatttcttccacttgctcattccttttttccaaaaccctcccctcc 55439485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 10 - 156
Target Start/End: Original strand, 33982753 - 33982899
Alignment:
Q  10 aaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttctt 109  Q
    ||||||||||||| |||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||| |||||  ||||||||||||| ||||    
T  33982753 aaaccctcccccactacaatttttaagttcccccaaatgaggaagattctttattatgagtaaaaaattaacctccaaagtcctctcctcccaatgtctt 33982852  T
Q  110 ctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||    
T  33982853 ctatttcttccacttgctccttcctttttttcaaaaccctcccctcc 33982899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 31178274 - 31178427
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||| ||||    
T  31178274 cccccaaaacccttccccaatacaatttttaagttctcccaaatgagggagattttttattatgagcaaaaaattaacctccaaagccctctccttccaa 31178373  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    | ||||||||||||||||||| || |||| ||||||  ||||||||||||||||    
T  31178374 tgtcttctatttcttccatttacttcttcatttttttcaaaaccctcccctccc 31178427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 17642639 - 17642481
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaattt 106  Q
    |||||||||||  || |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||| | ||||  ||||||| |    
T  17642639 ccaaaaccctcatccgatacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctcttttcccaatgt 17642541  T
Q  107 cttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctcc 166  Q
    ||||||||||||||| ||||| |||||||||||| |||||||||||||||| ||||||||    
T  17642540 cttctatttcttccacttgcttcttccttttttccaaaaccctcccctcccctcccctcc 17642481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 23163579 - 23163443
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||| |||||| |||||||||    
T  23163579 aaccccccaagaccctcccccaatacaatttttgagttccctcaaatgagggc-attttttattatgagtaaaaaattaacctccaaagccctctcctcc 23163481  T
Q  101 caatttcttctatttcttccatttgctccttccttttt 138  Q
      || |||||||||||||||| ||||||||||||||||    
T  23163480 tgatgtcttctatttcttccacttgctccttccttttt 23163443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 44412180 - 44412336
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||| |||| | ||||||| |    
T  44412180 aaccccccaaaaccctccctcaatacaatttttgagttccca-aaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctccttc 44412278  T
Q  101 caatttcttctatttcttccatttgctccttcct-tttttctaaaaccctcccctccc 157  Q
    |||| |||||||||||||||| |||||||||||| |||||  |||||||| |||||||    
T  44412279 caatgtcttctatttcttccacttgctccttcctattttttcaaaacccttccctccc 44412336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 38515290 - 38515152
Alignment:
Q  17 cccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttc 116  Q
    |||| |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||||||    
T  38515290 ccccaaatacaatttttgagttctcccaaatgagggggattttttattatgagtaaaaaattaacc-ccaaagccctctcctcccaatatcttctatttc 38515192  T
Q  117 ttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    || || |||||||||||||||| | |||||||||||||||    
T  38515191 tttcacttgctccttcctttttaccaaaaccctcccctcc 38515152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 34306165 - 34306016
Alignment:
Q  39 cccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttt 138  Q
    |||| ||||||| | |||||||||| ||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||| |||||||||||| |||    
T  34306165 cccctaaatgagggggattttttatcatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttcct-ttt 34306067  T
Q  139 tctaaaaccctcccctcccat-cccctccaaactttcaaacaaagccttag 188  Q
    || |||||||||||||||| | ||||||||||||  |||||||||||||||    
T  34306066 tccaaaaccctcccctcccctccccctccaaactcccaaacaaagccttag 34306016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 43007547 - 43007676
Alignment:
Q  27 aatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgc 126  Q
    |||||||||||||||||||| |||   || |||||||||| |||||||||||||||| |||||| ||||||||||||| |||||||||||||||| ||||    
T  43007547 aatttttgagttcccccaaacgaggaggaatttttattataagtaaaaaattaacctccaaagccctctcctcccaatatcttctatttcttccacttgc 43007646  T
Q  127 tccttccttttttctaaaaccctcccctcc 156  Q
    | |||||||||||| |||||||||||||||    
T  43007647 tacttccttttttccaaaaccctcccctcc 43007676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 2420725 - 2420537
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctc- 99  Q
    ||||| ||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||| | ||||| ||     
T  2420725 aaccctccaaaactctcccc-aatacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctctcatcc 2420628  T
Q  100 -----ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
         ||||| | || |||| |||||| |||||||||||||||||  |||||||||||||||  ||||||| |||||  ||||||||||||    
T  2420627 caaatccaatgtattttattacttccacttgctccttcctttttttcaaaaccctcccctccattcccctctaaactcccaaacaaagcct 2420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 25428724 - 25428571
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| ||||| ||||| ||||| |||||||||||||| | ||||||| |||||||||||||||||||||||| |||| || |||||| ||||||||     
T  25428724 aaccccctaaaactctcccgcaatataatttttgagttcctc-aaatgagggagattttttattatgagtaaaaa-ttaatctccaaagcgctctcctct 25428627  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| || || ||| |||||||| |||||||||||||||    
T  25428626 caatatcttctatttcttccacttacttctttcttttttccaaaaccctcccctcc 25428571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 188
Target Start/End: Original strand, 47434351 - 47434525
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttc 107  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||  ||||||||||||||| ||||||| |||||| |||||   ||||||  |||| ||    
T  47434351 caaaaccctccctcaacacaatttttgagttcccc-aaatgagatggattttttattatgaataaaaaactaacctccaaagtcttctcctttcaatgtc 47434449  T
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||||||||| || ||||||||||| |||| | |||||     ||||||||||||| |||||||||| |||||    
T  47434450 ttctatttcttccatttgttcattccttttttccaaaatcttcccc-----tcccctccaaactctcaaacaaaggcttag 47434525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 3537261 - 3537076
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttc-aaagctctctcctccca 102  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||   | |||| ||||||||  ||||  ||||||| | ||||| ||| |||||||    
T  3537261 cccccaaaactctcctccaatacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaag-ttaacctcccaaagccctcccctccca 3537163  T
Q  103 atttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
     |||| ||||||||||||| || ||| ||||||||||||||| || ||||||||| |||||||||||||  ||||||||| ||||||    
T  3537162 ttttcctctatttcttccacttactcattccttttttctaaagccttcccctcccttcccctccaaactcgcaaacaaagtcttaga 3537076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 46017269 - 46017100
Alignment:
Q  14 cctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctat 113  Q
    ||||| |||||||||||||||||||| ||||||| ||   |||||||||||||||||||||  ||||||| |||||   |||||||||||| ||||| ||    
T  46017269 cctcctccaatacaatttttgagttctcccaaataaggaggattttttattatgagtaaaa--ttaacctccaaagtcttctcctcccaatgtcttccat 46017172  T
Q  114 ttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||| || || ||||||| ||||||| |||| ||| ||||||| | |||||||||||  ||||||||||||    
T  46017171 ttctttcacttactccttctttttttccaaaatccttccctccccttccctccaaactcccaaacaaagcct 46017100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 32858886 - 32858701
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||| |||| | |||||||||||||||||||||||||||||   |||||| ||||||||   |||||| ||||  ||||||  |  ||||     
T  32858886 aaccccccaaaactctcctcgaatacaatttttgagttcccccaaatgaggaggattttatattatga-agaaaaatgaacccccaaagcctttccctct 32858788  T
Q  101 caatttcttctatttcttccatttgctccttcc--ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| || ||||||||||||| |||||| ||||  ||||||| ||| ||||||||| || |||||||||||||  ||||||||||||    
T  32858787 caatgtcatctatttcttccacttgctcattccttttttttccaaacccctccccttccttcccctccaaactcgcaaacaaagcct 32858701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 29623292 - 29623108
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||| |||||||||||  |||||||| ||||||||| ||| |||||||   | |||| ||||||||  ||||| |||||| ||||||| ||| |||||    
T  29623292 aacccctcaaaaccctcctgcaatacaacttttgagtttccc-aaatgaggagggttttgtattatgaagaaaaa-ttaaccatcaaagccctcccctcc 29623195  T
Q  101 caatttcttctatttcttccatttgctccttcctt-ttttct-aaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
     ||| || ||||||||||||| ||||||||||||| |||||| |||||||||||||| | ||||||| |||||  ||||||||||||    
T  29623194 taatgtcctctatttcttccacttgctccttcctttttttctcaaaaccctcccctctcttcccctctaaactcgcaaacaaagcct 29623108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 35283143 - 35282960
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||| ||||||| ||| |||||||||||||| ||||||||||||||||   | |||| |||| |||  ||||| | | ||  |||||||| |||||||    
T  35283143 aacccctcaaaaccttcctccaatacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaattaaccccccaaagctc-ctcctcc 35283045  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctt 186  Q
    ||||    ||||||||||||| |||||||||||||||| | ||| ||||||||| || |||||||||||||  |||||||||||||    
T  35283044 caatgatctctatttcttccacttgctccttcctttttaccaaa-ccctccccttccttcccctccaaactcgcaaacaaagcctt 35282960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 1132950 - 1133137
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatga-gagagattttttattatg-agtaaaaaattaaccttcaaagctctctcct 98  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||| |||| ||||||| |||  ||||| ||||  |||| |  || |||    
T  1132950 aaccctccaaaaccctcctccaatacaatttttgagttccccaaaatgaggagag-ttttgtattatgaagt--aaaatgaacccccaaaaccttcccct 1133046  T
Q  99 cccaatttcttctatttcttccatttgctccttcc--ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    | |||| || |||||||| |||| |||||| ||||  ||||||| ||| |||||||||||| |||||| ||||||  ||||||||||||||    
T  1133047 ctcaatgtcatctatttcgtccacttgctcattccttttttttccaaacccctcccctcccttcccctacaaactcgcaaacaaagcctta 1133137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 42583364 - 42583475
Alignment:
Q  69 gtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaa 168  Q
    ||||||||||||||| |||| | ||||| |  |||| |||||||||||||||| |||||| ||||||||||| ||||||||||||||||     ||||||    
T  42583364 gtaaaaaattaacctccaaaaccctctcatttcaatgtcttctatttcttccacttgctcattccttttttccaaaaccctcccctccc-----ctccaa 42583458  T
Q  169 actttcaaacaaagcct 185  Q
    |||  ||||||||||||    
T  42583459 actcccaaacaaagcct 42583475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 42583325 - 42583452
Alignment:
Q  17 cccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttc 116  Q
    |||||||||||||||||||||||||||||||||| | |||            ||||||||||||||| |||| | ||||| |  |||| |||||||||||    
T  42583325 cccccaatacaatttttgagttcccccaaatgag-gggat------------gtaaaaaattaacctccaaaaccctctcatttcaatgtcttctatttc 42583411  T
Q  117 ttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  42583412 ttccacttgctcattccttttttccaaaaccctcccctccc 42583452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 53620237 - 53620161
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||||||| ||| |||||||||||||||||| ||| ||||| |||||| |||||||||||||  ||||||||||||    
T  53620237 tctatttctcccacttgctccttccttttttccaaagccctcacctcccttcccctccaaactcgcaaacaaagcct 53620161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 3707091 - 3706976
Alignment:
Q  72 aaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccc-tcccctcccatcccctccaaac 170  Q
    |||||| ||||  ||||||  ||||||| |||| || ||||||||||||| ||||||||||||||||| | |||||| ||||||||| | ||||| ||||    
T  3707091 aaaaatgaacccccaaagccttctcctctcaatgtcatctatttcttccacttgctccttccttttttttcaaacccatcccctccctttccctctaaac 3706992  T
Q  171 tttcaaacaaagcctt 186  Q
    |  |||||||||||||    
T  3706991 tcgcaaacaaagcctt 3706976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 24588308 - 24588375
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatga 68  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||||||| | |||||| ||||||||    
T  24588308 aaccctccaaaaccatcccccaatacaatttttgagttcctccaaatgagggggattttgtattatga 24588375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33944665 - 33944803
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||   |||| ||||||  |||||| |||  ||||    
T  33944665 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcc 33944763  T
Q  101 caatttcttctatttcttccatttgctccttccttttttc 140  Q
    || |||| ||||||||||||| || ||  |||||||||||    
T  33944764 cattttcctctatttcttccacttacttattccttttttc 33944803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 49183653 - 49183562
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||||||| |||  ||||||||||||| |||||| |||||||||||  ||||| ||||||||  |||||||||||||  ||||||||||||||    
T  49183653 cctcccatttttctctatttcttccacttgctcattccttttttcccaaaccttcccctccattcccctccaaactcacaaacaaagcctta 49183562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 48370210 - 48370286
Alignment:
Q  6 cccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacct 83  Q
    ||||||| ||| | || |||||||||||||||||||| ||||||| |||||||| |||||||| ||||||||||||||    
T  48370210 cccaaaatccttctccgatacaatttttgagttcccc-aaatgagtgagattttatattatgaataaaaaattaacct 48370286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33908974 - 33909112
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| ||||||||| |||| |||| |||||||||||   | |||| ||||||||  ||||  | | ||  |||||| ||| | |||    
T  33908974 aaccccccaaaaccctcctccaatacaactttttagtttccccaaatgaggagggttttgtattatgaagaaaagttaatcccccaaagccctc-cttcc 33909072  T
Q  101 caatttcttctatttcttccatttgctccttccttttttc 140  Q
    || |||| ||||||||||||| |||||| |||||||||||    
T  33909073 cattttcctctatttcttccacttgctcattccttttttc 33909112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 48908899 - 48909084
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatga-gagagattttttattatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    |||||||||||||||||| |||||| ||||||| |||||| |||||| | ||| | |||| ||||||||   |||| ||||||  ||||||  ||  |||    
T  48908899 aaccccccaaaaccctcctccaatataattttttagttcctccaaattatgag-ggttttgtattatga-agaaaagttaacccccaaagccttcctctc 48908996  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||| |||| ||||||||||||| || ||  ||| ||||||   ||  | ||||||||| |||||||||||||| ||||||||||||||    
T  48908997 ccattttcctctatttcttccacttacttattcttttttttccaagtcttcccctcccttcccctccaaacttgcaaacaaagcctta 48909084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 53664632 - 53664763
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttct 108  Q
    |||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | || ||||||  |||  ||| || |||||    
T  53664632 aaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccctcaaagtcctcctctctcattttct 53664731  T
Q  109 tctatttcttccatttgctccttccttttttc 140  Q
    ||||||||||||| |||||| |||||||||||    
T  53664732 tctatttcttccacttgctcattccttttttc 53664763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 50948254 - 50948106
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttc--aaagctctctcctcccaattt 106  Q
    |||||||||| |||||||||||||| |||||| |||| ||||   | |||| ||||||||  ||||  |||||| ||  ||||| |||  |||||| |||    
T  50948254 aaaaccctcctccaatacaattttttagttcctccaactgaggagggttttgtattatgaagaaaag-ttaaccctccaaaagccctcctctcccatttt 50948156  T
Q  107 cttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||||||||||||||  ||||| |||||||||||  ||||| ||||||||    
T  50948155 cttctatttcttccacatgctcattccttttttcctaaaccttcccctcc 50948106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34306664 - 34306623
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccc 42  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  34306664 aaccctccaaaaccctcccccaatacaatttttgagttcccc 34306623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 52620850 - 52620899
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  52620850 aacccctcaaaaccctcctccaatacaatttttgagttctcccaaatgag 52620899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 53888543 - 53888498
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaa 46  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  53888543 aaccccccaaaaccctcctccaatacaattttttagttcccccaaa 53888498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 517657 - 517838
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||||||   | |||| ||||||||   |||||||||||  |||||| ||   ||||    
T  517657 aaccccccaaaaccctccttcaatacaa-ttttgagttcccccaaatgaggagggttttgtattatga-agaaaaattaacc-ccaaagcccttctctcc 517753  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
     | |||| ||||||||||||| |||||   ||||||||    || || | ||||||| |||||||||||||  ||||||||||||    
T  517754 tattttcctctatttcttccacttgcttagtcctttttcaccaagcctttccctcccttcccctccaaactcgcaaacaaagcct 517838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 11040859 - 11040919
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatg 67  Q
    |||||| | ||| |||||||||||||||||||||||||||| || |||||||| |||||||    
T  11040859 ccaaaatcatcctccaatacaatttttgagttcccccaaataagggagattttgtattatg 11040919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 22225403 - 22225285
Alignment:
Q  20 ccaatacaatttttgagttcccccaaatgagagagattttt-tattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttctt 118  Q
    |||||| ||||||| |||||||| ||||||| |||| |||  ||||||||  ||||| |||||| ||||||||||||||||| | |||| ||||||| ||    
T  22225403 ccaatataattttttagttcccctaaatgag-gagagtttagtattatgaagaaaaa-ttaaccctcaaagctctctcctcctattttcctctatttgtt 22225306  T
Q  119 ccatttgctccttcctttttt 139  Q
    |||||| ||| ||| ||||||    
T  22225305 ccatttactcattcttttttt 22225285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 5939810 - 5939945
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    |||||||||||||| |||||||| ||||  |||||| |||||||||  ||||||| ||||||||  ||||  | | ||  |||| |  ||  |||||| |    
T  5939810 ccccaaaaccctcctccaatacagttttgtagttcctccaaatgaggaagattttgtattatgaagaaaagttaaccccccaaaaccttcatctcccatt 5939909  T
Q  105 ttcttctatttcttccatttgctccttccttttttc 140  Q
    ||| ||||||||||||| |||||| |||||||||||    
T  5939910 ttcctctatttcttccacttgctcattccttttttc 5939945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15499324 - 15499391
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatga 68  Q
    ||||| |||||| | ||| |||||||||||||||||||| ||||||||||  ||||||| ||||||||    
T  15499324 aaccctccaaaatcatcctccaatacaatttttgagttctcccaaatgaggaagattttgtattatga 15499391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 30995831 - 30995788
Alignment:
Q  97 ctcccaatttcttctatttcttccatttgctccttccttttttc 140  Q
    |||||||| |||||||||||||||||||| ||||||||||||||    
T  30995831 ctcccaatatcttctatttcttccatttgttccttccttttttc 30995788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 38593003 - 38592926
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagt-aaaaaattaaccttcaaa 88  Q
    |||||||||||||| |||||||||||||||||||||     ||| || |||||||||||| ||| ||||||||||||| ||||    
T  38593003 ccaaaaccctccccaaatacaatttttgagttcccc-----gagggatattttttattataagtaaaaaaattaacctccaaa 38592926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25754127 - 25754176
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||||||||| ||||| |||||||||||||| |||||| |||||||||    
T  25754127 aaccccccaaaatcctcctccaatacaattttttagttcctccaaatgag 25754176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 38515458 - 38515503
Alignment:
Q  143 aaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||    
T  38515458 aaaccctcccctcccttcccctccaaatttccaaacaaagccttag 38515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38639645 - 38639596
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    ||||| |||||||||||| |||||||||||||| |||||| |||||||||    
T  38639645 aaccctccaaaaccctcctccaatacaattttttagttcctccaaatgag 38639596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 18257796 - 18257876
Alignment:
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaa 180  Q
    ||||| || ||||||||||||||||| || || | |||||| ||||| |||||||||  |||||||||||||  |||||||    
T  18257796 ccaatgtcctctatttcttccatttgttcatttcctttttccaaaactctcccctcctttcccctccaaactcgcaaacaa 18257876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 49855833 - 49856015
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| ||||||||||||  |||||||||||||||||||| | ||||||||   ||||| ||||||||   |||||| ||||  |||| |  ||  |||     
T  49855833 aaccctccaaaaccctccttcaatacaatttttgagttcctctaaatgagaattattttgtattatga-agaaaaatgaacccccaaaaccttcctctct 49855931  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    |||| || |||||||||| || |||||||||| ||||||| |||     | | |||  |||||||||||||  ||||||||||||||||    
T  49855932 caatgtcatctatttctttcacttgctccttcattttttccaaa-----ctcttcctctcccctccaaactcgcaaacaaagccttaga 49856015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 42155986 - 42156053
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaa 76  Q
    |||||| |||||||||| ||||||||||||||  |||||||| || ||||| |||||||  |||||||    
T  42155986 aaaaccttcccccaatataatttttgagttccttcaaatgagggaaattttgtattatggataaaaaa 42156053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 45570970 - 45571017
Alignment:
Q  3 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    ||||| |||| ||||| |||||||||||||| ||||||||||||||||    
T  45570970 cccccaaaaatcctcctccaatacaattttttagttcccccaaatgag 45571017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 183
Target Start/End: Original strand, 46672363 - 46672438
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaacc-ctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    ||||||||||||| ||||| ||||||||||| | |||||  ||||||| | |||||||||||||  ||||||||||    
T  46672363 tctatttcttccacttgcttcttccttttttttcaaaccattcccctctcttcccctccaaactcacaaacaaagc 46672438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Complemental strand, 30121379 - 30121337
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||| |||||||||||||  |||||||||||||||    
T  30121379 ccctcccctcccctcccctccaaactcccaaacaaagccttag 30121337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 39966895 - 39966965
Alignment:
Q  14 cctcccccaatacaatttt-tgagttcccccaaatgagagagattttttattatgagtaaaaaattaacct 83  Q
    |||||||||||| |||||| ||||||||  ||||||||| |||| || || ||||| ||||||||||||||    
T  39966895 cctcccccaatataattttttgagttccttcaaatgagaaagatattgtactatgaataaaaaattaacct 39966965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 54126213 - 54126155
Alignment:
Q  127 tccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||||||||  || |||||||||||||||| |||||||||||||  ||||||| ||||    
T  54126213 tccttcctttactccaaaaccctcccctcccttcccctccaaactcacaaacaatgcct 54126155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 16883260 - 16883215
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttct 141  Q
    ||||||| ||||||||||||||| || |||||| ||||||||||||    
T  16883260 cctcccattttcttctatttctttcacttgctcattccttttttct 16883215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 188
Target Start/End: Original strand, 23163750 - 23163779
Alignment:
Q  159 tcccctccaaactttcaaacaaagccttag 188  Q
    ||||||||||||||||||||||||||||||    
T  23163750 tcccctccaaactttcaaacaaagccttag 23163779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 44412011 - 44411970
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||||||||||| |||||||||||||  ||||||||||||||    
T  44412011 ccctcccctcccttcccctccaaactcccaaacaaagcctta 44411970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 49861060 - 49861101
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||||||||||| |||||||||||||  ||||||||||||||    
T  49861060 ccctcccctcccttcccctccaaactcccaaacaaagcctta 49861101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 51686562 - 51686521
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccc 42  Q
    ||||||| |||||||||| |||||||||||||| ||||||||    
T  51686562 aacccccaaaaaccctcctccaatacaattttttagttcccc 51686521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 21494960 - 21495004
Alignment:
Q  94 ctcctcccaatttcttctatttcttccatttgctccttccttttt 138  Q
    |||||||||||||| ||||||| ||||| || |||||||||||||    
T  21494960 ctcctcccaatttcctctattttttccacttactccttccttttt 21495004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27681864 - 27681816
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatga 49  Q
    |||||||||||||| ||| ||||||||| |||| |||||| ||||||||    
T  27681864 aaccccccaaaaccttccaccaatacaactttttagttcctccaaatga 27681816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 32720939 - 32720899
Alignment:
Q  154 tcccatcccctccaaactttcaaacaaagccttagaaaatt 194  Q
    |||| ||||||||||||| |||||||||||||||| |||||    
T  32720939 tcccctcccctccaaactctcaaacaaagccttagcaaatt 32720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 41677488 - 41677528
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaat 47  Q
    |||| |||||||| ||||||| |||||||||||||||||||    
T  41677488 ccaagaccctccctcaatacattttttgagttcccccaaat 41677528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 51684596 - 51684496
Alignment:
Q  85 caaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcc 184  Q
    |||||| ||| |||| || |||| ||||||||||||| ||| || |||||||||||  ||  | ||||||| | |||||||||||||  |||| ||||||    
T  51684596 caaagccctcccctctcattttcctctatttcttccacttgttcattccttttttcccaagtcttcccctctcttcccctccaaactcgcaaataaagcc 51684497  T
Q  185 t 185  Q
    |    
T  51684496 t 51684496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 188
Target Start/End: Original strand, 52620951 - 52621027
Alignment:
Q  112 atttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    ||||| |||| || ||||||||||||||| |||||||  ||||| | |||||||||||||  ||||||  |||||||    
T  52620951 atttcctccacttactccttccttttttccaaaacccatccctctcttcccctccaaactcgcaaacaccgccttag 52621027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 4e-65; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 12963996 - 12964181
Alignment:
Q  1 aaccccccaaaaccctcccccaa-tacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  12963996 aaccccccaaaaccctcccgcaaatacaattttggagttcccccaaatgatggagattttttattatgagtaaaaaattaacctccaaagctctctcctc 12964095  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| | |||||||| ||||  ||||||||||||    
T  12964096 ccaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctctcctcccctcccaactcccaaacaaagcct 12964181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 8990988 - 8991177
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||| |    
T  8990988 aacccccaaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctccaaagccatctccttc 8991087  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaaa 192  Q
    |||| |||||||||||||||| || || |||  ||||||| |||||||||||||||| |||||||||||||  |||||||||| ||||||||    
T  8991088 caatgtcttctatttcttccacttccttctt--ttttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagcattagaaaa 8991177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 18018622 - 18018802
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| | |||||||||    
T  18018622 aacccctcaaaaccctcccc-aatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctctcctcc 18018720  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    |||| ||||||||||||| || ||||| |||||||||||| |||||||||||||||| ||||||| |||||  |||||||||    
T  18018721 caatgtcttctatttctttcacttgcttcttccttttttccaaaaccctcccctcccctcccctcgaaactcccaaacaaag 18018802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 6 - 185
Target Start/End: Original strand, 3038976 - 3039157
Alignment:
Q  6 cccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatga--gtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  3038976 cccaaaaacctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgatcgtaaaaaattaaccttcaaagccctctcctcccaa 3039075  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    | |||||||||| ||||| |||||||||||||||||  ||||||||| |||||  |||||||||||||  ||||||||||||    
T  3039076 tgtcttctattttttccacttgctccttcctttttttcaaaaccctctcctcctctcccctccaaactcccaaacaaagcct 3039157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 18780440 - 18780251
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  | ||||| || ||| ||||||||||||||||| |||||| |||||||||    
T  18780440 aaccccccaaaaccctctcccaatacaatttttgagttcccccaaatgaaggggatttctttttaggagtaaaaaattaacctccaaagccctctcctcc 18780341  T
Q  101 ca--atttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    ||  || ||||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||    
T  18780340 caatatgtcttctatttcttccacgtgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagccttag 18780251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 30312430 - 30312611
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||| | |||||||||    
T  30312430 aaccccccaaaaccctccttcaatacaattttttagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctcctcc 30312529  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||| | |||||||||||||| |||||||||||||||||| ||||||||||||     |||||||||||||  ||||||||||||||    
T  30312530 caatgtgttctatttcttccacttgctccttccttttttccaaaaccctcccc-----tcccctccaaactcccaaacaaagcctta 30312611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 8555801 - 8555954
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| ||||||||||||||||| |||| | |||| ||||    
T  8555801 aaccccccaaaaccctcccccaatacaattttttagttcccccaaatgagggggattttttattacgagtaaaaaattaacctccaaaaccctcttctcc 8555900  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccct 154  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  8555901 caatgtcttctatttcttccacttgctccttccttttttcaaaaaccctcccct 8555954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 166
Target Start/End: Complemental strand, 1725963 - 1725800
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||| | | ||||||||||    
T  1725963 cccccaaaaccctcccccaatacaatttttgagttcccccagatgagggggattttttattatgagtaaaaaattaacctccaaaaccccctcctcccaa 1725864  T
Q  104 tttcttctatttcttccatttgctccttcctt-ttttctaaaaccctcccctcccatcccctcc 166  Q
    | | |||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||    
T  1725863 tgttttctatttcttccacttgctccttcctttttttccaaaaccctcccctcccctcccctcc 1725800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 4042020 - 4041865
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||| | |||||||||||||||||||||||||||||| |||| | |||||||||    
T  4042020 aaccccccaaaaccctcccccaatacaatttttgagttccttcaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctcctcc 4041921  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| | |||||||| ||||||| |||||||||||||||    
T  4041920 caatatcttctatttcttccactcgctccttctttttttccaaaaccctcccctcc 4041865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 10165467 - 10165285
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |  ||| |||||||||||||||||||||||||||||| | |||||||||||||    
T  10165467 ccccaaaaccctcccccaatacaattttttagttcccccaaatgaggggtattctttattatgagtaaaaaattaaccttcaaaaccctctcctcccaat 10165368  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
     |||||||||| ||||| ||||| |||||||||| | ||||| ||||| |||  |||||||||||||  ||||||||||||||    
T  10165367 gtcttctattttttccacttgcttcttcctttttaccaaaactctcccttcctctcccctccaaactcccaaacaaagcctta 10165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 32243528 - 32243375
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  32243528 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgaggatgattttttattatgattaaaaaattaacctccaaagccctctcctcccaa 32243429  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    | |||||||||||||||  ||||||||||| |||||  ||||||||||||||||    
T  32243428 tgtcttctatttcttcccattgctccttccattttttcaaaaccctcccctccc 32243375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 8 - 187
Target Start/End: Original strand, 25960642 - 25960821
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttc 107  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| |||||||  |||| ||    
T  25960642 caaaaccctcccccgatacaatttttgagttcccccaaatgagggagattttctattatgagtaaaaaattaacctccaaagccctctcctttcaatgtc 25960741  T
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    |||||||||||||| ||||||||| |||||||| ||||||||| | || | |||||| ||||||   |||||||||||||    
T  25960742 ttctatttcttccacttgctcctttcttttttccaaaaccctctcatctcctccccttcaaactcctaaacaaagcctta 25960821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 36567303 - 36567457
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||| |    
T  36567303 aaccccctaaaactctcccccaatacaatttttgagttcccccaaatgagggagattttttattatgagtaaaaaattaacctccaaaaccctctccttc 36567402  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| ||||||||| |||||||| ||||| |||||||||    
T  36567403 caatgtcttctatttcttccacttgctcctt-cttttttccaaaactctcccctcc 36567457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 18826251 - 18826412
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagaga------ttttttattatgagtaaaaaattaaccttcaaagctctc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||      |||||||||||||||||||||||||||| |||||| |||    
T  18826251 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggaggggaattttttattatgagtaaaaaattaacctccaaagccctc 18826350  T
Q  95 tcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    || ||| ||| |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  18826351 tcttcctaatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 18826412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 14008356 - 14008537
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||  |||| ||||||    
T  14008356 cccccaaaaccctctctcaatataatttttgagttcccccaaatgaga-agattttttattttgagtaaaaaattaacctccaaagccatctcatcccaa 14008454  T
Q  104 tttcttctatttcttccatttgctccttc-cttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    | |||||||||||||||| || |||||||  ||||||| |||||||||||||||| |||||||||||||  |||| |||||||    
T  14008455 tgtcttctatttcttccacttactccttcttttttttccaaaaccctcccctcccttcccctccaaactcccaaagaaagcct 14008537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 8410955 - 8411135
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||||| |||||| |||||||||    
T  8410955 aaccccccaaaacccacccccaatacaatttttgagttcccccaaatgaggggaattttttattataagtaaaaaattaacctccaaagccctctcctcc 8411054  T
Q  101 caatttcttctatttcttccatttgctccttcctttttt-ctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| ||||||||||| || | |||||||||| |||||| | ||||||||||||||||     |||||||||  ||||||||||||    
T  8411055 caatgtcttctatttcctcaacttgctccttcatttttttccaaaaccctcccctccc-----ctccaaactcccaaacaaagcct 8411135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 31550290 - 31550458
Alignment:
Q  17 cccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttc 116  Q
    |||||||||||||||||||||||||| ||||||| |  |||||||||||||||||||||||||||||  ||||| |||| |||| |   |||||||||||    
T  31550290 cccccaatacaatttttgagttcccctaaatgaggggaattttttattatgagtaaaaaattaacctcaaaagccctcttctccaatcgtcttctatttc 31550389  T
Q  117 ttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||| |||||||||  ||||||||||||    
T  31550390 ttccacttgctccttccttttttccaaaaccctcccctcccctccactccaaactcccaaacaaagcct 31550458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 38023472 - 38023625
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| | |||||||      
T  38023472 aaccccccaaaaccctcccc-aatacaatttttgagttcccc-aaatgagagagattttttattatgagtaaaaaattaacctccaaaaccctctccttt 38023569  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||| | |||||||||| ||||||| |||| ||||||||||    
T  38023570 caatgtcttctatttcttctacttgctccttcattttttccaaaatcctcccctcc 38023625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 38293936 - 38293756
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagc-----tctctcctcccaa 103  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||  |     |||| ||||||||    
T  38293936 aaaaccctcccccaatacaatttttgagttcccc-aaatgagggagattttttattatgagtaaaaaattaacctccaagaccctcttctcccctcccaa 38293838  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaa 190  Q
    | |||||||||||||||| |||||| ||||||||||| ||||||||||||     |||||||||||||  |||||||||||||||||    
T  38293837 tgtcttctatttcttccacttgctcattccttttttccaaaaccctcccc-----tcccctccaaactcccaaacaaagccttagaa 38293756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 726011 - 725855
Alignment:
Q  2 accccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagt-aaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||| | |||||||||||||  ||||| ||||||| |    
T  726011 accccccaaaaccctcccccaataaaatttttgagttcctccaaatgagggagattttttattatgaataaaaaaattaacctctaaagccctctccttc 725912  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    ||||||||||||||||||||| || ||  ||||||||||  ||||||||||||||||    
T  725911 caatttcttctatttcttccacttacttattcctttttttcaaaaccctcccctccc 725855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 19382933 - 19382798
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||||| |||||| || |||||     
T  19382933 aaccccccaaaaccctcccccaatacgatttttgagttcccc-aaatgagggggattttttattatgagtaaaaaattaacctacaaagccctttcctct 19382835  T
Q  101 caatttcttctatttcttccatttgctccttcctttt 137  Q
    |||| |||||||||||||||| |||||||||||||||    
T  19382834 caatgtcttctatttcttccacttgctccttcctttt 19382798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 13765964 - 13766118
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||||||||||||||||||||||||||  ||||| |||| || |    
T  13765964 aaccccccaaaaccctcccccaatacaatttttgagttcccc-aaatgaggggaattttttattatgagtaaaaaattaacctctaaagccctcttctac 13766062  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||| | ||||||||| |||||| || ||||||||||||    
T  13766063 caatgtcttctatttcttccactcgctccttccatttttccaataccctcccctcc 13766118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 44137191 - 44137026
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||||||||| |||||| |||||||||    
T  44137191 aaccccccaaaaccctcccccaatacaatttttgagttcc-----------------ttttattatgagtaaaaaattaacctccaaagccctctcctcc 44137109  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||     |||||||||||||  |||||||||||||||    
T  44137108 caatgtcttctatttcttccatttgctccttccttttttccaaaaccctcccc-----tcccctccaaactcccaaacaaagccttag 44137026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 3119880 - 3120059
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||||||| ||||||  ||||||||||||||||||||| ||||||  | |||||||||||||||||||||||||||||| |||| |  ||||||| |||    
T  3119880 cccccaaaatcctccct-aatacaatttttgagttcccc-aaatgaaggggattttttattatgagtaaaaaattaacctccaaaaccatctcctcgcaa 3119977  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    | |||||||||||||||  |||||| ||| ||||||| |||||||||||||||  ||||||||||| | |||||||||||||    
T  3119978 tgtcttctatttcttccccttgctcattctttttttccaaaaccctcccctcctctcccctccaaaatctcaaacaaagcct 3120059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 40357513 - 40357337
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| | |||||||||    
T  40357513 aaccccccaaaaccctctcccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaaaccctctcctcc 40357414  T
Q  101 caatttcttctatttcttccatttgctccttcctttttt-ctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
               | |||||||| ||||||||||||||||| | ||||| ||| |||||| |||| |||||||| |||||||||||||||    
T  40357413 -----------aattcttccacttgctccttccttttttccaaaaacactctcctcccctcccatccaaactatcaaacaaagcctta 40357337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 185
Target Start/End: Complemental strand, 4003475 - 4003300
Alignment:
Q  10 aaaccctcccccaatacaatttttgagttcccccaaatgagagagattttt-tattatgagtaaaaaattaaccttcaaagctctctcctcccaatttct 108  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||||  ||||| | | ||  |||||| ||| ||||||| ||||     
T  4003475 aaaccctcctccaatacaatttttgagttcccccaaatgag-gagagttttgtattatgaagaaaaattaaccccccaaagccctcccctcccattttcc 4003377  T
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||||||||||| |||||| ||||||||||| ||| |||||||||||| ||| |||||||||  ||||||||||||    
T  4003376 tctatttcttccacttgctcattccttttttccaaagccctcccctcccttccactccaaactcacaaacaaagcct 4003300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 18562039 - 18561909
Alignment:
Q  27 aatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgc 126  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||| ||||| |||||||| | ||||    
T  18562039 aatttttgagttccatcaaatgagggagattttttattatgagtaaaaaattaaccttcaaagtcatctcctcccaatgtcttcaatttcttctacttgc 18561940  T
Q  127 tccttccttttttct-aaaaccctcccctcc 156  Q
    | ||||||||||| | |||||||||||||||    
T  18561939 ttcttccttttttttcaaaaccctcccctcc 18561909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 11515100 - 11514916
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  ||||||||||  ||||    
T  11515100 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcc 11515001  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||||||||||||||||| |||||| |||||||||||  || || ||||||||| |||||||||||||  ||||||||||||    
T  11515000 cattttcttctatttcttccacttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaacaaagcct 11514916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 44020393 - 44020253
Alignment:
Q  18 ccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacct-tcaaagctctctcctcccaatttcttctatttc 116  Q
    |||| ||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||| | ||||||| ||||| |||||||||||    
T  44020393 ccccgatacaatttttgagttccctcagatgagggagattttttattatgagtaaaaaattaacctctcaaa-ccctctccttccaatgtcttctatttc 44020295  T
Q  117 ttccatttgctccttcctt--ttttctaaaaccctcccctcc 156  Q
    ||||| |||||| ||||||  ||||| |||| ||||||||||    
T  44020294 ttccacttgctcattcctttcttttccaaaatcctcccctcc 44020253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 6711871 - 6711987
Alignment:
Q  18 ccccaatacaatttttgagttcccccaaatgagagagatttt---ttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatt 114  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||   |||||||||||||||||||||| | |||||| |||||||| |||| |||||||||    
T  6711871 ccccaatacaattgttgagttcccctaaatgagagggatttttttttattatgagtaaaaaattaacttccaaagccctctcctctcaatgtcttctatt 6711970  T
Q  115 tcttccatttgctcctt 131  Q
    ||||||||||| |||||    
T  6711971 tcttccatttgttcctt 6711987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 16519114 - 16519300
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||| ||||||| | ||||||| |||| |||| |||||||||||   |||||| ||||||||  |||||   | ||  |||||| ||| |||||    
T  16519114 aaccccccaataccctcctctaatacaactttttagtttccccaaatgaggaggattttgtattatgaagaaaaatcaacccaccaaagccctcccctcc 16519213  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
     ||| |  ||||||||||||| |||||||||||||||||| |||||||||||||| | |||||||||||||  |||||||||||||||    
T  16519214 -aatgtactctatttcttccacttgctccttccttttttccaaaaccctcccctctcttcccctccaaactcgcaaacaaagccttag 16519300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 31899383 - 31899468
Alignment:
Q  16 tcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctccc 101  Q
    |||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  31899383 tcccccaatacaatttttgagttcccccaaattaggggaattttttattatgagtaaaaaattaacctccaaagccctctcctccc 31899468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 13018503 - 13018689
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaac-cttcaaagctctctcctc 99  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||||   | |||| ||||||||  ||||  ||||| |  |||||| |||  |||    
T  13018503 aaccccccaaaaccctcccccaatacatttttttagttcctccaaatgaggagggttttgtattatgaagaaaag-ttaactccccaaagccctcctctc 13018601  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||| |||| || |||||||||| || ||| |||||||||||| || || ||||||||| |||| ||||||||  ||||||||||||||    
T  13018602 ccattttcctccatttcttccacttactcattccttttttctcaagccttcccctcccttcccttccaaactcgcaaacaaagcctta 13018689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 85 - 183
Target Start/End: Original strand, 16625890 - 16625988
Alignment:
Q  85 caaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    |||||| ||| ||||||||| |  ||||||||||||| ||||||| |||||||||| |||||||||||||||| |||||||||||||  ||||||||||    
T  16625890 caaagccctcccctcccaatgtactctatttcttccacttgctccatccttttttccaaaaccctcccctcccttcccctccaaactcgcaaacaaagc 16625988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 15555390 - 15555550
Alignment:
Q  20 ccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttc 119  Q
    |||||||||||||| |||||| ||||||||||  | |||| ||||||||  |||| |||||||  |||||| |||  |||||| ||||||||||||||||    
T  15555390 ccaatacaattttttagttcctccaaatgagaagggttttgtattatgaagaaaa-attaacccccaaagccctcctctcccattttcttctatttcttc 15555488  T
Q  120 catttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
    || |||||| |||||||||||  ||  | ||||||||| | |||||||||||  ||||||||    
T  15555489 cacttgctcattccttttttcctaagtcttcccctccctttccctccaaactcgcaaacaaa 15555550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 1364889 - 1364750
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  |||||| |||  ||||    
T  1364889 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcc 1364790  T
Q  101 caatttcttctatttcttccatttgctccttccttttttc 140  Q
    || |||||||||||||||||| |||||| |||||||||||    
T  1364789 cattttcttctatttcttccacttgctcattccttttttc 1364750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 5322144 - 5322298
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| ||||||||||   |||||||| ||||||||||||||||||||||   |||||| ||||||||  ||||| | ||||  |||||||||| |||||    
T  5322144 aaccctccaaaacccttttccaatacagtttttgagttcccccaaatgaggaggattttgtattatgaagaaaaa-tgaacccccaaagctctcccctcc 5322242  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| || ||||| | ||||| | |||| ||||||||||| |||||| ||||||||    
T  5322243 caatgtcctctatcttttccactagctctttccttttttccaaaaccttcccctcc 5322298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 6656176 - 6655990
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaattt--ttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcct 98  Q
    |||||||||||||||||| ||||||||||||  || |||||| |||||||||   | |||| ||||||||  ||||  | | ||  |||||| |||  ||    
T  6656176 aaccccccaaaaccctcctccaatacaatttgttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctct 6656077  T
Q  99 cccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||| |||||||||||||||||| |||||| |||||||||||   | || ||||||||| |||||||||||||  || |||||||||    
T  6656076 cccattttcttctatttcttccacttgctcattccttttttccttagccttcccctcccttcccctccaaactcgcagacaaagcct 6655990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 11522286 - 11522373
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    ||||||||| || |||||||||||||||| ||||||||||||||  |||||||||||||||  |||||||||||||  ||||||||||    
T  11522286 cctcccaatgtcctctatttcttccatttactccttcctttttttcaaaaccctcccctccattcccctccaaactcgcaaacaaagc 11522373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 43334856 - 43334799
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttatta 65  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  43334856 caaaaccctcccccaatacaatttttgagttcccccaaaagagggagattttttatta 43334799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 40212059 - 40211876
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||  |||||||||||||| |||||| |||||||||   | |||| ||||||||  |||| | ||||| ||  ||| |||  ||||    
T  40212059 aaccccccaaaaccctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaata-taaccatccgagccctcctctcc 40211961  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    || |||| ||||||||||||| ||  |  |||||||||||| ||||| |||| |||| || ||||||||||  ||||||||||||    
T  40211960 cattttcctctatttcttccacttaattattccttttttctcaaaccttcccatcccttctcctccaaactcacaaacaaagcct 40211876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 34757661 - 34757493
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  |||   | | ||  |||||| |||  ||||    
T  34757661 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaggttaaccccccaaagccctcctctcc 34757562  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaa 169  Q
    || |||  |||||||||| ||  ||||| |||||||||||  ||||| ||||||||| |||||||||||    
T  34757561 catttttctctatttctttcacctgctcattccttttttcccaaaccttcccctcccttcccctccaaa 34757493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 31082871 - 31082733
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||| |||   | |||  ||||| ||   |||| ||||||  |||||| ||| |||||    
T  31082871 aaccccccaaaaccctcctccaatacaatattttagttcccccaaacgaggagggtttagtattacga-agaaaagttaacccccaaagccctcccctcc 31082773  T
Q  101 caatttcttctatttcttccatttgctccttccttttttc 140  Q
    || |||| ||||||||||||| |||||| |||||||||||    
T  31082772 cattttcctctatttcttccacttgctcattccttttttc 31082733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 43572569 - 43572757
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaag-----ctctct 95  Q
    ||||||||||||| |||| |||||||||||||| |||||| |||||||||   | |||| ||||||||   |||| ||||||  |||||     |||||     
T  43572569 aaccccccaaaactctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctctcc 43572667  T
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
     |||||| |||| ||||||||||||| || |   |||||||||||  || || ||||||||| |||||||||||||  ||||||||||||    
T  43572668 tctcccactttcctctatttcttccacttacctattccttttttcccaagccttcccctcccttcccctccaaactcgcaaacaaagcct 43572757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 188
Target Start/End: Original strand, 32761370 - 32761486
Alignment:
Q  72 aaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaact 171  Q
    |||||| ||||  |||||| |||| | |||||| || ||||||| ||||| ||| |||||| ||||||  ||| |||||||||||| |||||||||||||    
T  32761370 aaaaatgaacccacaaagccctctgcccccaatgtcctctatttattccacttgatccttcattttttacaaagccctcccctcccttcccctccaaact 32761469  T
Q  172 ttcaaacaaagccttag 188  Q
      ||| |||||||||||    
T  32761470 cgcaatcaaagccttag 32761486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 36030856 - 36030714
Alignment:
Q  14 cctcccccaatacaatttttgagttcccccaaatgagagagattttt-tattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttcta 112  Q
    ||||| ||| ||||||||||||||||||||||||||| |||| |||| |||| |||  ||||| | ||||  |||||| ||||| || |||  || ||||    
T  36030856 cctcctccattacaatttttgagttcccccaaatgag-gagaattttgtattctgaagaaaaa-tgaacccccaaagccctctcttctcaaggtcctcta 36030759  T
Q  113 tttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    ||||||||| | |||||||||||||||| |||  |||||||||||    
T  36030758 tttcttccactggctccttccttttttccaaagtcctcccctccc 36030714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26599274 - 26599323
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  26599274 aacctcccaaaaccctcctccaatacaatttgtgagttcccccaaatgag 26599323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26905860 - 26905811
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  26905860 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgag 26905811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 37194323 - 37194142
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| |||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  |||||| |||  || |    
T  37194323 aacccccaaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcgtcttc 37194224  T
Q  101 caatttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
    || |||| ||||||||||||| || ||  |||| |||||||| ||  | ||||||||| |||||||||||||  ||||||||    
T  37194223 cattttcctctatttcttccacttacttattcctttttttctcaagtcttcccctcccttcccctccaaactcgcaaacaaa 37194142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 43333531 - 43333446
Alignment:
Q  72 aaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttc-cttttttctaaaaccctcccctcc 156  Q
    ||||||||| || ||||||  |||||| ||||| |||||||||||||||| ||||||||||  ||||||| ||||||||| |||||    
T  43333531 aaaaattaatctccaaagccatctccttccaatgtcttctatttcttccaattgctccttcttttttttcgaaaaccctctcctcc 43333446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 180
Target Start/End: Complemental strand, 21834992 - 21834815
Alignment:
Q  6 cccaaaaccctcccccaatacaatttttgagttcccccaaatga-gagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    ||||||||||||| | ||||||| |||| |||||||| |||||| ||||| |||| ||||||||  ||||| | | ||| |||||| ||  | |||| ||    
T  21834992 cccaaaaccctcctctaatacaactttttagttcccctaaatgaggagag-ttttatattatgaagaaaaattaatcctccaaagcccttccgtcccgat 21834894  T
Q  105 ttcttctatttcttccatttgctccttcc---ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaa 180  Q
     || ||| ||||||||| |||||||||||   |||||| | |||||||||| |||| |||||| ||||||  |||||||    
T  21834893 gtcctctgtttcttccacttgctccttccttttttttttttaaaccctcccttcccttccccttcaaactcgcaaacaa 21834815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13767484 - 13767406
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaa 80  Q
    ||||| |||||| ||||||| |||||||||||| |||||||||||||||| |  ||||| |||||||| || ||||||||    
T  13767484 aacccgccaaaatcctcccc-aatacaattttttagttcccccaaatgagtggaattttgtattatgaatataaaattaa 13767406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 39181041 - 39180955
Alignment:
Q  95 tcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    |||||||||  || ||||||||||||| || |||||||||||||||  ||| ||||||||||| ||| |||||||||  |||||||||    
T  39181041 tcctcccaaagtcctctatttcttccacttactccttccttttttc-caaatcctcccctcccttcctctccaaactcgcaaacaaag 39180955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 21626172 - 21625987
Alignment:
Q  8 caaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttc 107  Q
    ||||||||| | ||||||||| |||| ||||||||||||||||   | |||| ||||||||  ||||  | | ||  |||||| ||| | | ||| ||||    
T  21626172 caaaacccttctccaatacaactttttagttcccccaaatgaggatggttttgtattatgaagaaaagttaaccccccaaagcactc-ctttccattttc 21626074  T
Q  108 ttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttagaaaatt 194  Q
     ||||||||||| | |||||| ||||||||||   ||| | ||||||||  ||||||||||| |  |||||||||||||||| ||||    
T  21626073 ctctatttcttctacttgctcattcctttttttccaaatcttcccctccattcccctccaaattcgcaaacaaagccttagagaatt 21625987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 14363544 - 14363658
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    ||||||||||   |||||||| ||||||||||||| || |||| | || ||||||  ||  ||| |||||| ||||||||||||||||| ||||||| ||    
T  14363544 ccccaaaaccactccccaatataatttttgagttctcc-aaatca-agggattttgcatcgtgaataaaaatttaaccttcaaagctctttcctccctat 14363641  T
Q  105 ttcttctatttcttcca 121  Q
     |||||||||| |||||    
T  14363642 gtcttctatttattcca 14363658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 30072516 - 30072572
Alignment:
Q  84 tcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttc 140  Q
    ||||||| ||| ||||||| |||| ||||||||||||| |||||| |||||||||||    
T  30072516 tcaaagccctcccctcccattttcctctatttcttccacttgctcattccttttttc 30072572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 36870310 - 36870270
Alignment:
Q  10 aaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  36870310 aaaccctcctccaatacaattttttagttcccccaaatgag 36870270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 11950227 - 11950266
Alignment:
Q  149 tcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  11950227 tcccctcccctcccctccaaacttccaaacaaagccttag 11950266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 15803244 - 15803065
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| |||||| ||||| |||||||||||||| ||||||||||| ||||   | |||| |||| |||  |||||     ||| |||||| | ||||| |    
T  15803244 aaccctccaaaatcctcctccaatacaattttttagttcccccaactgaggagggttttatattttgaagaaaaataagccctccaaagc-ccctccttc 15803146  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    |||| || || |||||||||| |||||||||||||||| |  || || | || |||| ||| |||||||||| ||||||||||    
T  15803145 caatgtcctccatttcttccacttgctccttcctttttcc--aagcctttccttcccttcctctccaaacttgcaaacaaagc 15803065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 40357677 - 40357720
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||    
T  40357677 aaaactctcccctcccttcccctccaaacttccaaacaaagcct 40357720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 1726120 - 1726162
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||| || |||||||||| ||||||||||||||||    
T  1726120 ccctcccctcccttctcctccaaactctcaaacaaagccttag 1726162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 9618514 - 9618369
Alignment:
Q  9 aaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttct 108  Q
    |||||||||  | |||||||||||| ||||| || | || ||||| ||||| |||||||| ||||||||||| |  |||||  ||||||| | ||| |||    
T  9618514 aaaaccctcatcaaatacaatttttaagttctcc-acattagagatattttgtattatgaataaaaaattaatc-ccaaag--ctctccttctaatgtct 9618419  T
Q  109 tctatttcttcca-tttgctcc-ttccttttttctaaaaccctcccctcc 156  Q
    |||||||||| || |||||||| |||  |||||||||||||||| |||||    
T  9618418 tctatttctttcactttgctcctttcaatttttctaaaaccctcacctcc 9618369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11522205 - 11522246
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccc 42  Q
    |||||||||||||||||| ||||||||| |||| ||||||||    
T  11522205 aaccccccaaaaccctcctccaatacaactttttagttcccc 11522246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 188
Target Start/End: Complemental strand, 39750100 - 39750027
Alignment:
Q  115 tcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    ||||||| |||||| |||||||||||  || || |||||| || |||||||||||||  |||| ||||||||||    
T  39750100 tcttccacttgctcattccttttttcccaagccttccccttccttcccctccaaactcgcaaagaaagccttag 39750027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 42644710 - 42644646
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatga 68  Q
    ||||||||||||||||||   |||||||||||| ||||||||||||| || | || ||| ||||||||    
T  42644710 aaccccccaaaaccctcc---aatacaattttttagttcccccaaattagggggaatttgtattatga 42644646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 30523299 - 30523236
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatga 68  Q
    ||||||||| ||||| |||||||||||||| |||| |||||||| |||  |||||| ||||||||    
T  30523299 cccccaaaatcctcctccaatacaattttttagtt-ccccaaattagaaggattttgtattatga 30523236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 37664615 - 37664567
Alignment:
Q  20 ccaatacaatttttgagttcccccaaatgagagagattttttattatga 68  Q
    |||||||||||||| |||||| |||||| || |||||||| ||||||||    
T  37664615 ccaatacaatttttaagttcctccaaataagggagattttatattatga 37664567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 9e-63; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 26574420 - 26574596
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||   |||||| |    
T  26574420 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaaccttcaaagtcatctccttc 26574519  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||||     ||||||||||||| ||||||||||    
T  26574520 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctcccc-----tcccctccaaactctcaaacaaag 26574596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 29241858 - 29242013
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||| |||||| |||||||||    
T  29241858 aaccccctaaaaccctcccccaatacaatttttgagttaccccaaatgagggggattttttattatgagtaaaaaattatcctccaaagccctctcctcc 29241957  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29241958 caatgtcttctatttcttccatttgctccttccttttttccaaaaccctcccctcc 29242013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 4909940 - 4910094
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  4909940 aaccccccaaaaccctcccccaatacaatttttaagttcctccaaatgagagagattttttattatgagtaaaaaattaacctccaaagctctcccctcc 4910039  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||| ||||||||| ||||||||||| | |||| |||||||||||||||    
T  4910040 caatgtcttctgtttcttccacttgctccttccatctttc-aaaaccctcccctcc 4910094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 1029349 - 1029198
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| ||||||| |    
T  1029349 aaccccccaaaaccctcccctaatacaattttttacttcccccaaatgagagaaattttttattatgagtaaaaaattatcctccaaagccctctccttc 1029250  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctccc 152  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  1029249 caatgtcttctatttcttccacttgctccttccttttttccaaaaccctccc 1029198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 24734936 - 24734782
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  24734936 aaccccctaaaaccctcccccaatacaattt--gagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 24734839  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    |||| |||||||||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  24734838 caatgtcttctatttcttccacttgctcgttccttttttccaaaaccctcccttccc 24734782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 5825385 - 5825234
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaa 103  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| | ||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  5825385 cccccaaaaccctcccccaatacaaattttgagttcccc-aaatgagggggattttttattatcagtaaaaaattaaccttcaaagccttctcctcccaa 5825287  T
Q  104 tttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    | ||||||||||||| || |||||||||||||||||| |||||||||||||||    
T  5825286 tgtcttctatttctttcacttgctccttccttttttccaaaaccctcccctcc 5825234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 34914683 - 34914499
Alignment:
Q  1 aaccccccaaaaccctccccc-aatacaatttttgagtt-cccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcct 98  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||||    
T  34914683 aacctcccaaaaccctccccccaatacaatttttgagtttcccccaaatgagaga--ttttttattatgagtaaaaaattaacctccaaagccctctcct 34914586  T
Q  99 cccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
     |||||  || |||||||||||| || || || ||||||||| ||||||||||||| || ||||||| |||||  ||||||||||||    
T  34914585 tccaatgcctactatttcttccacttacttctcccttttttccaaaaccctccccttccctcccctcaaaactcccaaacaaagcct 34914499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 26481161 - 26481332
Alignment:
Q  6 cccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagatttttt-attatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||| | |||||||| |||||||||||||||||||||| ||||||     ||| |||||    
T  26481161 cccaaaatcctcccccaatacaatttttgagctcccctaaatgagggggatttttttattatgagtaaaaaattaacctccaaagc-----ccttccaat 26481255  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaa 181  Q
     |||||||||||||||| ||||| |||||||||||  |||||||||||||||| |||||||||||||  ||||||||    
T  26481256 gtcttctatttcttccacttgctacttcctttttttcaaaaccctcccctcccctcccctccaaactcccaaacaaa 26481332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 31345399 - 31345579
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||  | ||||||| |||||||||||||||||||| |  ||||  ||||||||||||     
T  31345399 ccccaaaaccctccctcaatacaatttttgagttcccccacatgaaggggatttttaattatgagtaaaaaattaacatctaaagtcctctcctcccaac 31345498  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
     |||||||||| ||||| | || ||||||||||||  |||| ||||||||| | |||||||||||||  ||||||||||||    
T  31345499 gtcttctattttttccactcgcaccttcctttttttcaaaaacctcccctcacctcccctccaaactcccaaacaaagcct 31345579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 26713919 - 26713733
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagatttt-ttattatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||   |||||| |||| ||||  ||||| | | || ||||||| ||| ||||    
T  26713919 aaccctccaaaaccctcctccaatacaatttttgagttcccc-aaatgaggaggattttcttatcatgaagaaaaattaacccctcaaagccctcccctc 26713821  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||||| |  ||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||||||||||  ||||||||||||||    
T  26713820 ccaatgtactctatttcttccacttgctccttcctttattccaaaaccctcccctcccttcccctccaaactcgcaaacaaagcctta 26713733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 14276037 - 14275904
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    ||||||||| || ||||| ||||||||||  |||| | |||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  14276037 ccccaaaactctaccccattacaattttttcgttcgctcaaatgag-gagattttttattatgagtaaaaaattaaccttcatagccctctcctcccaat 14275939  T
Q  105 ttcttctatttcttccatttgctccttcctttttt 139  Q
     |||||||||||||||| |||||| ||||||||||    
T  14275938 gtcttctatttcttccacttgctcattcctttttt 14275904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23095153 - 23095253
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||    
T  23095153 aaccccccaaaaccctccccccatacaattttttagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcc 23095252  T
Q  101 c 101  Q
    |    
T  23095253 c 23095253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 1567337 - 1567149
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||||| ||| |||||  |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  | | ||  ||||||||||  ||||    
T  1567337 aacccccaaaatccctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcc 1567238  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    || |||||||||||||||||| |||||| |||||||||||  || || ||||||||| |||||||||||||  |||||||| |||||||    
T  1567237 cattttcttctatttcttccacttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaacaaaaccttaga 1567149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 2365721 - 2365806
Alignment:
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||| |||||||||||||||| |||||||||||||||||  |||||||||||||||| |||||||||||||  ||||||||||||    
T  2365721 ccaatgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcccctcccctccaaactcccaaacaaagcct 2365806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 32719401 - 32719582
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    ||||| |||||||||||| |||||||||||||| |||||| |||||||||   | |||| ||||||||   |||| ||||||  |||||| |||   |||    
T  32719401 aaccctccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaacccccaaagccctcctttcc 32719499  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    || |||| ||||||||||||| || ||  |||||||||||   | || ||||||||| |||||||||||||  ||||||||||    
T  32719500 cattttcctctatttcttccacttacttattccttttttccctagccttcccctcccttcccctccaaactcgcaaacaaagc 32719582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 24874960 - 24875096
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||| ||||||||||||| |||||||||| ||| |||||||| ||||||| | | |||  ||||||||  ||||  || |||  |||||| ||| |||||    
T  24874960 aacctcccaaaaccctcctccaatacaatgttttagttcccc-aaatgaggggg-tttagtattatgaagaaaag-ttgacccccaaagccctcccctcc 24875056  T
Q  101 caatttcttctatttcttccatttgctccttccttttttc 140  Q
    || |||||| |||||||||||||||||  |||||||||||    
T  24875057 cattttcttatatttcttccatttgcttattccttttttc 24875096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 33590447 - 33590536
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||||| |||| ||||||| || || |||||| ||||||| |||| ||||| ||| ||||  |||||||||||||  ||||||||||||    
T  33590447 cctcccattttcctctatttttttcacttgctcattcctttcttctcaaaccttccactccattcccctccaaactcgcaaacaaagcct 33590536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 12779564 - 12779387
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaattt 106  Q
    |||||||||||| ||||||||| |||| ||||||||||||| |||  | |||| || || ||   |||| ||||||  |||||| ||| | ||||| |||    
T  12779564 ccaaaaccctcctccaatacaactttttagttcccccaaataagaagggttttgtagtacga-agaaaagttaacccccaaagccctc-cttcccatttt 12779467  T
Q  107 cttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    | ||||||| ||| | |||||| ||||||||||   ||||| ||||||||| || ||||| ||||  ||||||||||||||    
T  12779466 cctctatttattctacttgctcattcctttttttccaaaccttcccctcccttcacctcc-aactcgcaaacaaagcctta 12779387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 15615632 - 15615580
Alignment:
Q  92 ctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaa 144  Q
    ||||||||||||| ||||||||||||| || |||||||| | |||||||||||    
T  15615632 ctctcctcccaatgtcttctatttctttcacttgctcctcctttttttctaaa 15615580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 33212280 - 33212204
Alignment:
Q  109 tctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||||||||| || ||| |||||| |||||| ||||| | ||||||| | |||||| ||||||| ||||||||||||    
T  33212280 tctatttctttcacttgatccttcattttttttaaaatcatcccctctcttcccctgcaaacttgcaaacaaagcct 33212204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 28552005 - 28552048
Alignment:
Q  96 cctcccaatttcttctatttcttccatttgctccttcctttttt 139  Q
    ||||||| |||||||||||||||||| |||||| ||||||||||    
T  28552005 cctcccattttcttctatttcttccacttgctcattcctttttt 28552048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 4027122 - 4027172
Alignment:
Q  89 gctctctcctcccaatttcttctatttcttccatttgctccttcctttttt 139  Q
    ||||||| ||| |||| ||||||||||||||||||| ||| ||||||||||    
T  4027122 gctctcttctctcaatgtcttctatttcttccatttcctcattcctttttt 4027172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 13380591 - 13380529
Alignment:
Q  7 ccaaaaccctcccccaatacaatttttgagttc-ccccaaatgagagagattttttattatga 68  Q
    |||||||||||  |||||||||||||||||||| |||||||||||   |||||| ||||||||    
T  13380591 ccaaaaccctcttccaatacaatttttgagttccccccaaatgaggatgattttatattatga 13380529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 24735102 - 24735148
Alignment:
Q  142 aaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||||||| |||||||||||||  |||||||| ||||||    
T  24735102 aaaaccctcccctcccctcccctccaaactcccaaacaaaaccttag 24735148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 29241696 - 29241651
Alignment:
Q  140 ctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||||    
T  29241696 ctaaagccctcccctcccttcccctccaaactcccaaacaaagcct 29241651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33755105 - 33755056
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    ||||||||||| |||||| ||||||||||| || |||| |||||||||||    
T  33755105 aaccccccaaagccctcctccaatacaattgtttagtttccccaaatgag 33755056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6688061 - 6688101
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttccc 41  Q
    ||||||||||||| |||| |||||||||||||| |||||||    
T  6688061 aaccccccaaaactctcctccaatacaattttttagttccc 6688101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 8439412 - 8439468
Alignment:
Q  18 ccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaa 74  Q
    ||||||| ||||||||||||||  ||| |||||| ||||||| |||||||| |||||    
T  8439412 ccccaatgcaatttttgagttcttccagatgagaaagattttgtattatgaataaaa 8439468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 23095253 - 23095293
Alignment:
Q  116 cttccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||||| |||||||||||||||||| |||| ||||||||||    
T  23095253 cttccacttgctccttccttttttccaaaatcctcccctcc 23095293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 25073428 - 25073468
Alignment:
Q  154 tcccatcccctccaaactttcaaacaaagccttagaaaatt 194  Q
    |||| |||||||||||||| ||||||||||||||| |||||    
T  25073428 tcccttcccctccaaacttgcaaacaaagccttaggaaatt 25073468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 31345232 - 31345184
Alignment:
Q  140 ctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    |||||||||||||||||  |||| ||||||||  |||||||||||||||    
T  31345232 ctaaaaccctcccctccgttcccttccaaactcccaaacaaagccttag 31345184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 35480 - 35667
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||| |||||||||||| |||    
T  35480 aaccccccaaaaccctcccccaatacaatttttgagttcccc-aaatgaggggaattttttattatgagtaaaaaattaacctccaaagctctctcttcc 35578  T
Q  101 caatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttaga 189  Q
    |||| ||||||||||||| || |||||||||||||||||| |||||||||||||| | ||| ||||||||   ||||||||||||||||    
T  35579 caatgtcttctatttctttcacttgctccttccttttttccaaaaccctcccctcgcctcctctccaaacacccaaacaaagccttaga 35667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 92; Significance: 7e-45; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 196 - 29
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttccccc-aaatga-gagagattttttattatgagtaaaaaattaaccttcaaagctctctcct 98  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||| | |   |||||||||||||||||||||||||||| ||||||  ||| ||    
T  196 aacccctcaaaaccctcccccaatacaatttttgagttcccccaaaatgaggggtttttttttattatgagtaaaaaattaacctccaaagccttcttct 97  T
Q  99 cccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctcc 166  Q
    |||||| | |||||||||||||| |||||||||| ||||||||||||||||||| |||| ||||||||    
T  96 cccaatgttttctatttcttccacttgctccttctttttttctaaaaccctcccttcccctcccctcc 29  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 364 - 400
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  364 ccctcccctcccttcccctccaaactctcaaacaaag 400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 92; Significance: 7e-45; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 2397 - 2564
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttccccc-aaatga-gagagattttttattatgagtaaaaaattaaccttcaaagctctctcct 98  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||| | |   |||||||||||||||||||||||||||| ||||||  ||| ||    
T  2397 aacccctcaaaaccctcccccaatacaatttttgagttcccccaaaatgaggggtttttttttattatgagtaaaaaattaacctccaaagccttcttct 2496  T
Q  99 cccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctcc 166  Q
    |||||| | |||||||||||||| |||||||||| ||||||||||||||||||| |||| ||||||||    
T  2497 cccaatgttttctatttcttccacttgctccttctttttttctaaaaccctcccttcccctcccctcc 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 2229 - 2193
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaag 182  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  2229 ccctcccctcccttcccctccaaactctcaaacaaag 2193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0636 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 8453 - 8306
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||||||| | |||||   ||||||| ||||    
T  8453 ccccaaaaccctccctcaatacaatttttgaattcccccaaatgagtggaattttttattatgagtaaaaaattaacatccaaagtcatctcctctcaat 8354  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctccc 152  Q
     |||||||||||||||| ||  | ||||||||||||||||||||||||    
T  8353 atcttctatttcttccacttatttcttccttttttctaaaaccctccc 8306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 3714 - 3852
Alignment:
Q  19 cccaatacaatttttgagttcccccaaatgagagagatttt-ttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttct 117  Q
    |||||||||||||||||||||||||||||  | | |||||| |||||||||||||||||||| ||| ||||||  | |||||| ||| ||||||||||||    
T  3714 cccaatacaatttttgagttcccccaaatatgggggatttttttattatgagtaaaaaattatcctccaaagccttatcctccaaatgtcttctatttct 3813  T
Q  118 tccatttgctccttccttttttctaaaaccctcccctcc 156  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  3814 tccacttgctccttccttttttccaaaaccctcccctcc 3852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 2052 - 2234
Alignment:
Q  5 ccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcccaat 104  Q
    ||||||| || ||| |||||||||||||| |||||| |||||||||   | |||| ||||||||  ||||  ||||||  |||||| |||  |||||| |    
T  2052 ccccaaatccttcctccaatacaatttttcagttcctccaaatgaggagggttttgtattatgaagaaaag-ttaacccccaaagccctcctctcccatt 2150  T
Q  105 ttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagccttag 188  Q
    ||||||||||||||||| |||||| |||||||||||| || || ||||||||| |||||||||||||| |||||||||||||||    
T  2151 ttcttctatttcttccacttgctcattccttttttcttaagccttcccctcccttcccctccaaacttgcaaacaaagccttag 2234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 60; Significance: 9e-26; HSPs: 3)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1634 - 1548
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaa 88  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||| | || ||||||||||||||||||||||||||| ||||    
T  1634 aaccccccaaaaccctcccccaatacaatttttgagttcctccatatgaggggga-tttttattatgagtaaaaaattaacctccaaa 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 1540 - 1481
Alignment:
Q  128 ccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||||| ||||||| ||||| |||||||||| ||||||||||||| ||| |||||||||||    
T  1540 ccttcattttttccaaaactctcccctcccctcccctccaaactctcatacaaagcctta 1481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 1803 - 1842
Alignment:
Q  146 ccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  1803 ccctcccctcccttcccctccaaactctcaaacaaagcct 1842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 107761 - 107859
Alignment:
Q  58 ttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    |||||||||||||||||||||||||| ||||  |||||| ||||||| |||||||||||||| | || |||||||||||||||  |||||||||||||||    
T  107761 ttttattatgagtaaaaaattaacctccaaaattctctcttcccaatatcttctatttcttcaacttactccttccttttttc-caaaccctcccctccc 107859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1163 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1163
Description:

Target: scaffold1163; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 2030 - 1931
Alignment:
Q  85 caaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcc 184  Q
    |||||| ||| ||||||| |||||||||||||||||| |||||||||||||||||  |||  | |||| |||| |||||||||||||  |||||||||||    
T  2030 caaagccctcccctcccattttcttctatttcttccacttgctccttcctttttttcaaagtcttcccttcccttcccctccaaactcgcaaacaaagcc 1931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 76001 - 75903
Alignment:
Q  58 ttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    |||||||||||||||||||||||||| ||||  |||||| || |||| |||||||||||||| | || |||||||||||||||  ||| |||||||||||    
T  76001 ttttattatgagtaaaaaattaacctccaaaattctctcttctcaatatcttctatttcttcaacttactccttccttttttc-caaatcctcccctccc 75903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 67896 - 67798
Alignment:
Q  58 ttttattatgagtaaaaaattaaccttcaaagctctctcctcccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctccc 157  Q
    |||||||||||||||||||||||||| ||||   ||||| || |||| |||||||||||||| | || |||||||||||||||  ||| |||||||||||    
T  67896 ttttattatgagtaaaaaattaacctccaaaatcctctcttcacaatatcttctatttcttcaacttactccttccttttttc-caaatcctcccctccc 67798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 29300 - 29162
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatga-gagagattttttattatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    ||||||||||| || ||| |||||||||||||| |||||| |||||||| ||| | |||| ||||||||  ||||  |||||| ||||||| ||   |||    
T  29300 aaccccccaaatccttcctccaatacaattttttagttcctccaaatgatgaggg-ttttgtattatgaagaaaag-ttaaccctcaaagcccttctctc 29203  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttc 140  Q
    ||| |||||||||||||||||| |||||| |||||||||||    
T  29202 ccattttcttctatttcttccacttgctcattccttttttc 29162  T

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Target: scaffold0248 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 221 - 403
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctcc 100  Q
    |||||| ||||||||||| |||||||||||||| |||||| |||||| ||   | |||| ||||||||   |||| ||||||  ||||||||||  ||||    
T  221 aaccccgcaaaaccctcctccaatacaattttttagttcctccaaataaggagggttttgtattatga-agaaaagttaacccccaaagctctcctctcc 319  T
Q  101 caatttcttctatttcttccatttgctccttccttttt-tctaaaaccctcccctcccatcccctccaaactttcaaacaaagc 183  Q
    || |||| ||||||||||||| |||||  ||| ||||| ||  || |  ||||||||| |||||||||||||  ||||||||||    
T  320 cattttcctctatttcttccacttgcttattcttttttatcccaagctttcccctcccttcccctccaaactcgcaaacaaagc 403  T

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Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 6782 - 6967
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctt-caaagctctctcctc 99  Q
    |||||||||||||||||| |||||||||| ||| |||||| |||||||||   | |||| ||||||||   |||| |||||||| |||  | ||| ||||    
T  6782 aaccccccaaaaccctcctccaatacaatgttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaaccttccaattccctcccctc 6880  T
Q  100 ccaatttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||| |||  ||||||| ||||  |||||| |||| |||||||| ||  | ||||||||| |||||||||||||  ||||||||||||    
T  6881 ccatttttctctattttttccgcttgctcgttcctttttttctcaagacttcccctcccttcccctccaaactcgcaaacaaagcct 6967  T

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Target: scaffold0051; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 7765 - 7950
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaacctt-caaagctctctcctc 99  Q
    |||||||||||||||||| |||||||||| ||| |||||| |||||||||   | |||| ||||||||   |||| |||||||| |||  | ||| ||||    
T  7765 aaccccccaaaaccctcctccaatacaatgttttagttcctccaaatgaggagggttttgtattatga-agaaaagttaaccttccaattccctcccctc 7863  T
Q  100 ccaatttcttctatttcttccatttgctccttcc-ttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||| |||  ||||||| ||||  |||||| |||| |||||||| ||  | ||||||||| |||||||||||||  ||||||||||||    
T  7864 ccatttttctctattttttccgcttgctcgttcctttttttctcaagacttcccctcccttcccctccaaactcgcaaacaaagcct 7950  T

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Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 82852 - 82667
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttc-aaagctctctcctc 99  Q
    ||||| |||||| | ||| ||||||||||||| |||||||| ||||| ||   |||||| ||||||||  ||||| | ||||  | ||||| || | |||    
T  82852 aaccctccaaaatcatcctccaatacaattttggagttccctcaaattaggaggattttgtattatgaagaaaaa-taaacccccgaaagcccttttctc 82754  T
Q  100 ccaatttcttctatttcttccatttgctccttcctt-ttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
     |||  || ||||||||||||| ||||||||||||| ||||| ||| |||||||||||| | |||||||||||  |||| |||||||    
T  82753 tcaaagtcatctatttcttccacttgctccttcctttttttccaaagccctcccctcccttaccctccaaactcacaaagaaagcct 82667  T

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Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 26436 - 26251
Alignment:
Q  1 aaccccccaaaaccctcccccaa-tacaatttttgagttcccccaaatgagagagattttttattatgagtaaaaaattaaccttcaaagctctctcctc 99  Q
    |||||||||||||||||| |||| |||||||||| |||||| |||||||||   | |||| ||||||||  ||||  |   ||  |||||| |||  |||    
T  26436 aaccccccaaaaccctcctccaaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttatccccccaaagccctcctctc 26337  T
Q  100 ccaatttcttctatttcttccatttgctccttccttttttctaaaaccctcccctcccatcccctccaaactttcaaacaaagcct 185  Q
    ||| |||| ||||||||||||| || ||  |||||||||||  || || ||||||||| |||||| ||||||   |||||||||||    
T  26336 ccattttcctctatttcttccacttacttattccttttttcccaagccttcccctcccttccccttcaaactcgtaaacaaagcct 26251  T

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Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 93531 - 93580
Alignment:
Q  1 aaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgag 50  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  93531 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgag 93580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 74717 - 74782
Alignment:
Q  3 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagattttttattatga 68  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||| || | |||||| ||||||||    
T  74717 ccccccaaaaccctcctccaatacaatttttcagttccctcaaattagggggattttgtattatga 74782  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 82846 - 82922
Alignment:
Q  112 atttcttccatttgctccttcctttttt-ctaaaaccctcccctcccatcccctccaaactttcaaacaaagcctta 187  Q
    ||||||||||  |||||||||||||||| | ||| ||||||||| |  | |||||||||||  ||||||||||||||    
T  82846 atttcttccacctgctccttcctttttttccaaagccctccccttcatttccctccaaactcgcaaacaaagcctta 82922  T

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Target: scaffold0274 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 15970 - 15836
Alignment:
Q  4 cccccaaaaccctcccccaatacaatttttgagttcccccaaatgagagagatttttt-attatgagtaaaaaattaaccttcaaagctctctcctccca 102  Q
    ||||||||||||||| |||||||||||||| | || ||||||||||| |||||||||| |||||||  ||||| | | |||||||| ||||| | |||||    
T  15970 cccccaaaaccctcctccaatacaatttttaaatt-ccccaaatgag-gagattttttcattatgaagaaaaattaacccttcaaaactctcccatccca 15873  T
Q  103 atttcttctatttcttccatttgctccttcctttttt 139  Q
     |||| |||| || || || |||||  ||||||||||    
T  15872 ttttcctctacttattacacttgcttattcctttttt 15836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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