View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9327_high_7 (Length: 259)

Name: NF9327_high_7
Description: NF9327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9327_high_7
NF9327_high_7
[»] chr8 (1 HSPs)
chr8 (1-88)||(31227247-31227334)


Alignment Details
Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31227247 - 31227334
Alignment:
1 gattataaagcttaaaggctaagacacaaaagttgaagtgtgctctctctctaaacatgactagttataaggatggtattttactttg 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
31227247 gattataaagcttaaaggttaagacacaaaagttgaagtgtgctctctctgtaaacatgactagttataaggatggtattttactttg 31227334  T

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