View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9330_high_17 (Length: 281)
Name: NF9330_high_17
Description: NF9330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9330_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 8 - 264
Target Start/End: Original strand, 33655833 - 33656089
Alignment:
| Q |
8 |
caatgaaaattggtgatctaacatatacaatcctagagtgtagctaaagccattgcaattcagttcaacattaagctaaaacccaatccacaagattcct |
107 |
Q |
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| T |
33655833 |
caatgaaaattggtgatctaacatatacactcttagattgtaactagagtcattgcaattcagttcaacattaagttaaaactcaatccacaagattcct |
33655932 |
T |
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| Q |
108 |
cattcatttcaagtttttaaccaaatactttggactaaacattacataggagggaaaataatacaaaattataaaagtggatgatgacaatcatgatagt |
207 |
Q |
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||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
33655933 |
cattcatttcaagtttttaaccaaatactttggactagatattccataggagggaaaataatacaaaattataaaagtgaatgatgacaatcatgatagt |
33656032 |
T |
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| Q |
208 |
catcaagtaaagtgacagtaaaaaaccaagtcaaaatgatggatccaatccaaatca |
264 |
Q |
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| T |
33656033 |
catcaagtaaagtgacagtaaaaaaccaagtcaaaatgatggatccaatccaaatca |
33656089 |
T |
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