View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9330_low_49 (Length: 252)

Name: NF9330_low_49
Description: NF9330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9330_low_49
NF9330_low_49
[»] chr7 (1 HSPs)
chr7 (1-244)||(29622564-29622807)
[»] chr5 (9 HSPs)
chr5 (1-236)||(35371122-35371357)
chr5 (1-236)||(35411280-35411515)
chr5 (5-236)||(35386634-35386865)
chr5 (97-244)||(35377067-35377214)
chr5 (76-243)||(35367479-35367646)
chr5 (1-244)||(35426026-35426269)
chr5 (1-236)||(35755465-35755700)
chr5 (1-59)||(23935956-23936014)
chr5 (130-236)||(35437715-35437821)
[»] chr3 (1 HSPs)
chr3 (1-244)||(1154288-1154531)
[»] chr1 (2 HSPs)
chr1 (1-244)||(10415010-10415253)
chr1 (61-228)||(10419956-10420123)
[»] chr2 (5 HSPs)
chr2 (1-234)||(30626666-30626899)
chr2 (1-125)||(30663701-30663825)
chr2 (1-125)||(30672381-30672505)
chr2 (168-234)||(30663619-30663685)
chr2 (168-234)||(30672299-30672365)
[»] chr8 (3 HSPs)
chr8 (48-236)||(15294352-15294540)
chr8 (48-236)||(15474721-15474909)
chr8 (66-204)||(13564902-13565040)


Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 29622564 - 29622807
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29622564 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 29622663  T
Q  101 actatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29622664 actatctcaagaattccttctggaatcttcatcttacagaatttgtgtaggcttaaattctcacaaaacatgttatctgctggtctctttccagtgagca 29622763  T
Q  201 tctctaacagaagaatgccaaagctgtagatatctctctgtggt 244  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  29622764 tctctaacagaagaatgccaaagctgtagatatctccctgtggt 29622807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 8e-76; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 35371357 - 35371122
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 100  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||| ||| | |||||     
T  35371357 tgcaactccaattgcagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtatcatcttcagcaaatggtaaaagcaaatgtgaatct 35371258  T
Q  101 actatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagca 200  Q
    ||||||||||| |||||||||||||| ||||| || |||||||  ||||| |||| | ||||| |||||||||||||||||||||||||||| |||||||    
T  35371257 actatctcaaggattccttctggaattttcattttgcagaattcatgcagacttagactctcagaaaacatgttatctgttggtctctttccggtgagca 35371158  T
Q  201 tctctaacagaagaatgccaaagctgtagatatctc 236  Q
    |||||||||||||||| |||||||| ||||||||||    
T  35371157 tctctaacagaagaatcccaaagctatagatatctc 35371122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 35411515 - 35411280
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| ||| | |||||     
T  35411515 tgcaactccgattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtctcatcttcagcaaatggtaaaagcaaatgtgaatct 35411416  T
Q  101 actatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagca 200  Q
    ||||||||||| |||||||||| ||| ||||| || |||||||  || || |||| | ||||| ||||  |||||| ||||||||||||| |||||| ||    
T  35411415 actatctcaaggattccttctgaaattttcattttgcagaattcatgtagacttagactctcagaaaagttgttatttgttggtctctttgcagtgaaca 35411316  T
Q  201 tctctaacagaagaatgccaaagctgtagatatctc 236  Q
    ||||||  |||||||| |||||||||||||||||||    
T  35411315 tctctagtagaagaatcccaaagctgtagatatctc 35411280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 236
Target Start/End: Complemental strand, 35386865 - 35386634
Alignment:
Q  5 actccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatccacta 104  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||| | ||| ||  | ||||| ||||    
T  35386865 actccaattgcagcaaacatcaccaaacaattcctaatcttgttttccacaatccccatctcatcttcagcaaatggaaaaagcaattgagaatctacta 35386766  T
Q  105 tctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagcatctc 204  Q
    ||||||| ||| |||||||||| || || || |||||||| ||||| |||||  ||||| ||||  |||||| ||||||||||||||| |||| ||||||    
T  35386765 tctcaaggattgcttctggaatttttattttgcagaatttatgcagacttaatctctcagaaaagttgttatttgttggtctctttccggtgaacatctc 35386666  T
Q  205 taacagaagaatgccaaagctgtagatatctc 236  Q
    ||  |||||||| |||||||||||||||||||    
T  35386665 tagtagaagaatcccaaagctgtagatatctc 35386634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 97 - 244
Target Start/End: Complemental strand, 35377214 - 35377067
Alignment:
Q  97 atccactatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtg 196  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||||||| | ||||| |||||||||||| ||||||||||||||||||||||||||     
T  35377214 atccactatatcaagaattccttctggaattttcatcttacaaaatttgtgtaagcttagattctcacaaaagatgttatctgttggtctctttccagta 35377115  T
Q  197 agcatctctaacagaagaatgccaaagctgtagatatctctctgtggt 244  Q
    |||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  35377114 agcatctctaacagaagaattccatagctatagatatctccctgtggt 35377067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 35367646 - 35367479
Alignment:
Q  76 aaatggtataagtaaacgggaatccactatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgtta 175  Q
    |||||| ||||| ||| | ||||||||||||||||||||| || | ||||| |||||||||||||||||||| ||||| | |||||| ||||||||| ||    
T  35367646 aaatggcataagcaaatgtgaatccactatctcaagaatttctacgggaattttcatcttacagaatttgtgaaggctaagattctcgcaaaacatgcta 35367547  T
Q  176 tctgttggtctctttccagtgagcatctctaacagaagaatgccaaagctgtagatatctctctgtgg 243  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||| ||||||    
T  35367546 tctgttggtctctttccagtgagcatctctaacagtagaatcccaaagctgtaaacatctccctgtgg 35367479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 35426269 - 35426026
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 100  Q
    ||||| ||| ||| ||||||||||||| ||||| | | | || |||||||||| ||    |||  |||||||||||||||  ||||| || |  ||||||    
T  35426269 tgcaattcctattttagcaaacatcactaaacactcctttatgttgttttccataacttgtgtttgatcttcagcaaatgacataagcaagcatgaatcc 35426170  T
Q  101 actatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagca 200  Q
    ||||  |||||||||||||| |||||  ||||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  35426169 actacatcaagaattccttcaggaattctcatcttacagaatttgtgtaaacttaaattctcataaaacatgttatctgttggtctctttccagtaagca 35426070  T
Q  201 tctctaacagaagaatgccaaagctgtagatatctctctgtggt 244  Q
    |||||||||||| ||| ||| |||| |||||||||| |||||||    
T  35426069 tctctaacagaacaattccatagctatagatatctccctgtggt 35426026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 35755700 - 35755465
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 100  Q
    ||||||||| ||| ||||||||||||| | ||| | | | || |||||||||||||  | |||| |||||||| | ||||| |||||  ||||||||||     
T  35755700 tgcaactcctattttagcaaacatcactagacactcctttatgttgttttccacaactcgtgtctgatcttcaaccaatggaataaggcaacgggaatct 35755601  T
Q  101 actatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagca 200  Q
    || | |||||||||| |||| |||||  ||||||||||||||||||| ||  ||| ||||||| |||||||||||||||||||||||||||| || ||||    
T  35755600 acaacctcaagaatttcttcaggaattctcatcttacagaatttgtgtagagttagattctcataaaacatgttatctgttggtctctttccggtaagca 35755501  T
Q  201 tctctaacagaagaatgccaaagctgtagatatctc 236  Q
    | || ||||| ||||| ||| ||||||| |||||||    
T  35755500 tttccaacagcagaatcccatagctgtaaatatctc 35755465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23935956 - 23936014
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatcc 59  Q
    ||||||| ||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  23935956 tgcaacttcaattctagcaaacatcaccaaaaacctcctaatcttgttttccacaatcc 23936014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 35437821 - 35437715
Alignment:
Q  130 catcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagcatctctaacagaagaatgccaaagctgtag 229  Q
    ||||||||| |||||||| ||||||| |   |||||||||||||| ||||||||| | ||| | || | |||||| ||||  ||||| ||| |||||||     
T  35437821 catcttacataatttgtgtaggcttagaccttcacaaaacatgttgtctgttggtttttttgctgttaacatctccaacaatagaattccatagctgtaa 35437722  T
Q  230 atatctc 236  Q
    |||||||    
T  35437721 atatctc 35437715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 1154531 - 1154288
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 100  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||  ||||| |||||||  |||| || ||||| |||||    ||     
T  1154531 tgcaactccaattctagcaaacatcaccaaacactttttaatcttgttttccacaatttctgtctgatcttcgacaaacggcataagcaaacgttggtcg 1154432  T
Q  101 actatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagca 200  Q
    ||||||||||| |||||||| | ||| ||||| ||||| || | ||  |||||||||||||||||||| ||  |||  |||||||||||||| |||||||    
T  1154431 actatctcaaggattccttcagaaattttcattttacaaaactcgtataggcttaaattctcacaaaatatactattggttggtctctttccggtgagca 1154332  T
Q  201 tctctaacagaagaatgccaaagctgtagatatctctctgtggt 244  Q
    |||||||||||||||| ||||||||||||||||||| |||||||    
T  1154331 tctctaacagaagaatcccaaagctgtagatatctccctgtggt 1154288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 10415010 - 10415253
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 100  Q
    ||||||||| |||  | |||||||||||||||| ||| ||||||| |||||||||||||| |||  | |||| |||||||| | ||||||  | |||||     
T  10415010 tgcaactccgattgcaccaaacatcaccaaacacttcttaatcttattttccacaatccccgtctcaacttcggcaaatggcaaaagtaattgtgaatct 10415109  T
Q  101 actatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagca 200  Q
    |||||||| || |||||||||||||| ||||| || |||||||  || || |||  | ||||| |||||||||||| |||||||||||||||||||||||    
T  10415110 actatctcgaggattccttctggaattttcattttgcagaattcatgtagactttgactctcagaaaacatgttatttgttggtctctttccagtgagca 10415209  T
Q  201 tctctaacagaagaatgccaaagctgtagatatctctctgtggt 244  Q
    |||||||||||||||| |||||||| |||||||||| |||||||    
T  10415210 tctctaacagaagaatcccaaagctatagatatctccctgtggt 10415253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 10419956 - 10420123
Alignment:
Q  61 tgtccgatcttcagcaaatggtataagtaaacgggaatccactatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattc 160  Q
    |||| |||||| || |||||| ||||| ||| | ||||||||||||||||||||| || | ||||| |||||||||||||||||||| ||||| | ||||    
T  10419956 tgtctgatctttaggaaatggcataagcaaatgtgaatccactatctcaagaatttctacaggaattttcatcttacagaatttgtgaaggctaagattc 10420055  T
Q  161 tcacaaaacatgttatctgttggtctctttccagtgagcatctctaacagaagaatgccaaagctgta 228  Q
    |  | ||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  10420056 tggctaaacatgttatctgttggtctctttccagtgagcatctctaacaagagaatcccaaagctgta 10420123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 5e-46; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 30626899 - 30626666
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 100  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||  ||||||||||||||| | ||| ||| | |||||     
T  30626899 tgcaactccaattatagcaaacatcactaagcaattcctaatcttgttttccacaatccctgtctcatcttcagcaaatggcaaaagcaaatgtgaatct 30626800  T
Q  101 actatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagca 200  Q
    ||||||||||  ||||| |||||||  |||||||||||||||   || || || | | |  || |||||||| ||| ||||||||| |||||||||||||    
T  30626799 actatctcaaagattccatctggaactttcatcttacagaatgcatgtagactgagacttccagaaaacatgctatttgttggtctttttccagtgagca 30626700  T
Q  201 tctctaacagaagaatgccaaagctgtagatatc 234  Q
    | ||||| |||||||| ||  |||||||||||||    
T  30626699 tttctaagagaagaatcccgtagctgtagatatc 30626666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 30663825 - 30663701
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 100  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||  ||||||||||||||| | ||| ||| | |||||     
T  30663825 tgcaactccaattatagcaaacatcactaagcaattcctaatcttgttttccacaatccctgtctcatcttcagcaaatggcaaaagcaaatgtgaatct 30663726  T
Q  101 actatctcaagaattccttctggaa 125  Q
    ||||||||||  ||||| |||||||    
T  30663725 actatctcaaagattccatctggaa 30663701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 30672505 - 30672381
Alignment:
Q  1 tgcaactccaattctagcaaacatcaccaaacaattcctaatcttgttttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatcc 100  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||  ||||||||||||||| | ||| ||| | |||||     
T  30672505 tgcaactccaattatagcaaacatcactaagcaattcctaatcttgttttccacaatccctgtctcatcttcagcaaatggcaaaagcaaatgtgaatct 30672406  T
Q  101 actatctcaagaattccttctggaa 125  Q
    ||||||||||  ||||| |||||||    
T  30672405 actatctcaaagattccatctggaa 30672381  T

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Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 30663685 - 30663619
Alignment:
Q  168 acatgttatctgttggtctctttccagtgagcatctctaacagaagaatgccaaagctgtagatatc 234  Q
    ||||| ||| |||||||||||||||||||||||| ||||| |||||||| ||  |||||||||||||    
T  30663685 acatgctatttgttggtctctttccagtgagcatttctaatagaagaattccgtagctgtagatatc 30663619  T

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Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 30672365 - 30672299
Alignment:
Q  168 acatgttatctgttggtctctttccagtgagcatctctaacagaagaatgccaaagctgtagatatc 234  Q
    ||||| ||| |||||||||||||||||||||||| ||||| |||||||| ||  |||||||||||||    
T  30672365 acatgctatttgttggtctctttccagtgagcatttctaatagaagaattccgtagctgtagatatc 30672299  T

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Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 15294540 - 15294352
Alignment:
Q  48 tttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatccactatctcaagaattccttctggaatcttcatcttacagaatttgtg 147  Q
    ||||||||| |  |||| |||||||| | ||||| |||||  || | ||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||    
T  15294540 tttccacaacctttgtctgatcttcaaccaatggaataagccaatgagaacccactatctcaagaattccttctggaattttcatcttacaaaatttctg 15294441  T
Q  148 caggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagcatctctaacagaagaatgccaaagctgtagatatctc 236  Q
     || |||| ||||||||| |||||| ||| ||||||||||||||| |||||||| || ||||| ||||| ||| |||||||||||||||    
T  15294440 tagacttagattctcacagaacatgctatttgttggtctctttccggtgagcatttccaacagcagaatcccatagctgtagatatctc 15294352  T

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Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 15474909 - 15474721
Alignment:
Q  48 tttccacaatccctgtccgatcttcagcaaatggtataagtaaacgggaatccactatctcaagaattccttctggaatcttcatcttacagaatttgtg 147  Q
    ||||||||| |  |||| |||||||| | ||||| |||||  || | ||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||    
T  15474909 tttccacaacctttgtctgatcttcaaccaatggaataagccaatgagaacccactatctcaagaattccttctggaattttcatcttacaaaatttctg 15474810  T
Q  148 caggcttaaattctcacaaaacatgttatctgttggtctctttccagtgagcatctctaacagaagaatgccaaagctgtagatatctc 236  Q
     || |||| ||||||||| |||||| ||| ||||||||||||||| |||||||| || ||||| ||||| ||| |||||||||||||||    
T  15474809 tagacttagattctcacagaacatgctatttgttggtctctttccggtgagcatttccaacagcagaatcccatagctgtagatatctc 15474721  T

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Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 13565040 - 13564902
Alignment:
Q  66 gatcttcagcaaatggtataagtaaacgggaatccactatctcaagaattccttctggaatcttcatcttacagaatttgtgcaggcttaaattctcaca 165  Q
    ||||||| | |||||| ||||| |||||   |||||||||| |||| |||||||||||||| |||||||||||| | ||||| ||  ||| |   ||  |    
T  13565040 gatcttccgtaaatggcataagcaaacgttgatccactatcgcaaggattccttctggaattttcatcttacagtaattgtgtagatttagaccgtcgga 13564941  T
Q  166 aaacatgttatctgttggtctctttccagtgagcatctc 204  Q
    ||||||| |||| |||||||||||||| |||||||||||    
T  13564940 aaacatgatatccgttggtctctttccggtgagcatctc 13564902  T

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