View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9330_low_64 (Length: 220)

Name: NF9330_low_64
Description: NF9330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9330_low_64
NF9330_low_64
[»] chr6 (22 HSPs)
chr6 (1-210)||(235240-235448)
chr6 (1-210)||(28075665-28075873)
chr6 (1-210)||(27788704-27788911)
chr6 (1-176)||(17353870-17354044)
chr6 (1-176)||(20711736-20711910)
chr6 (1-176)||(34397773-34397947)
chr6 (1-161)||(19737708-19737867)
chr6 (47-210)||(19987043-19987207)
chr6 (1-137)||(13727415-13727550)
chr6 (1-137)||(21479449-21479584)
chr6 (1-137)||(33774072-33774207)
chr6 (1-137)||(21280500-21280635)
chr6 (1-105)||(24711015-24711118)
chr6 (1-84)||(1155865-1155946)
chr6 (1-105)||(30832540-30832643)
chr6 (1-89)||(2477600-2477686)
chr6 (1-89)||(21183691-21183777)
chr6 (1-67)||(27314194-27314259)
chr6 (1-78)||(6159453-6159528)
chr6 (8-84)||(4036957-4037031)
chr6 (6-89)||(20611794-20611875)
chr6 (96-136)||(30121706-30121746)
[»] chr8 (34 HSPs)
chr8 (1-210)||(42600661-42600869)
chr8 (1-210)||(10917270-10917478)
chr8 (1-210)||(23798277-23798484)
chr8 (1-154)||(23606645-23606797)
chr8 (1-161)||(45475745-45475904)
chr8 (1-161)||(41879109-41879268)
chr8 (1-161)||(13534703-13534861)
chr8 (1-161)||(13624243-13624401)
chr8 (1-137)||(5860760-5860895)
chr8 (1-137)||(30883281-30883416)
chr8 (1-137)||(2952237-2952372)
chr8 (1-137)||(3048533-3048668)
chr8 (1-90)||(37430174-37430261)
chr8 (1-89)||(7944538-7944624)
chr8 (1-89)||(8102913-8102999)
chr8 (1-89)||(11290185-11290271)
chr8 (7-89)||(5942697-5942777)
chr8 (8-89)||(15078759-15078838)
chr8 (11-87)||(34789888-34789962)
chr8 (96-136)||(25561640-25561680)
chr8 (96-134)||(8102845-8102883)
chr8 (1-89)||(15167431-15167517)
chr8 (96-136)||(8646129-8646169)
chr8 (96-136)||(15167547-15167587)
chr8 (96-136)||(41677307-41677347)
chr8 (7-89)||(5721560-5721640)
chr8 (7-89)||(39332427-39332507)
chr8 (9-66)||(30674427-30674482)
chr8 (1-89)||(5973123-5973209)
chr8 (1-89)||(8646207-8646292)
chr8 (99-136)||(11290113-11290150)
chr8 (96-136)||(7944656-7944696)
chr8 (1-89)||(14509999-14510084)
chr8 (96-136)||(15078689-15078729)
[»] chr5 (38 HSPs)
chr5 (1-210)||(16198807-16199015)
chr5 (1-176)||(38869376-38869550)
chr5 (1-210)||(9364170-9364378)
chr5 (7-207)||(7670806-7671005)
chr5 (1-176)||(40389549-40389723)
chr5 (1-169)||(28822355-28822522)
chr5 (1-210)||(27923961-27924169)
chr5 (1-176)||(16799340-16799513)
chr5 (1-161)||(27078939-27079098)
chr5 (1-161)||(30854258-30854416)
chr5 (1-158)||(16592087-16592243)
chr5 (1-137)||(34756379-34756514)
chr5 (1-105)||(19523183-19523286)
chr5 (1-105)||(36187892-36187995)
chr5 (1-105)||(2274874-2274977)
chr5 (1-105)||(15480102-15480205)
chr5 (4-161)||(22986574-22986719)
chr5 (1-92)||(23284075-23284164)
chr5 (1-84)||(31194625-31194705)
chr5 (1-68)||(7338021-7338086)
chr5 (7-84)||(36868895-36868970)
chr5 (6-81)||(10543682-10543755)
chr5 (96-136)||(11242449-11242489)
chr5 (96-136)||(15639575-15639615)
chr5 (1-84)||(24395745-24395826)
chr5 (1-84)||(31881447-31881527)
chr5 (96-136)||(34425832-34425872)
chr5 (7-89)||(2530916-2530996)
chr5 (1-89)||(14318398-14318484)
chr5 (8-84)||(26718969-26719043)
chr5 (8-84)||(26988713-26988787)
chr5 (1-89)||(33037781-33037867)
chr5 (48-89)||(40794385-40794426)
chr5 (1-84)||(2024655-2024736)
chr5 (96-136)||(2024771-2024811)
chr5 (96-136)||(7079561-7079601)
chr5 (6-89)||(34425904-34425985)
chr5 (96-136)||(40794456-40794496)
[»] chr3 (36 HSPs)
chr3 (1-210)||(53506900-53507107)
chr3 (1-210)||(44708359-44708567)
chr3 (1-210)||(54407174-54407381)
chr3 (1-176)||(34290652-34290826)
chr3 (1-176)||(43207254-43207427)
chr3 (1-210)||(9878703-9878910)
chr3 (1-210)||(37168248-37168457)
chr3 (1-176)||(50939249-50939423)
chr3 (1-161)||(3953912-3954071)
chr3 (1-161)||(8073354-8073512)
chr3 (1-176)||(48157055-48157219)
chr3 (1-137)||(54619219-54619354)
chr3 (1-137)||(36716041-36716176)
chr3 (1-137)||(27078585-27078720)
chr3 (1-137)||(27084382-27084517)
chr3 (1-137)||(38681109-38681244)
chr3 (1-105)||(21582758-21582861)
chr3 (1-105)||(47467671-47467774)
chr3 (1-144)||(18372427-18372573)
chr3 (1-105)||(53149330-53149433)
chr3 (1-91)||(42098803-42098891)
chr3 (20-137)||(29620423-29620539)
chr3 (1-84)||(36605974-36606055)
chr3 (96-136)||(29598040-29598080)
chr3 (96-136)||(49393023-49393063)
chr3 (1-66)||(8420353-8420416)
chr3 (1-86)||(49393097-49393179)
chr3 (96-136)||(52374590-52374630)
chr3 (13-87)||(28689389-28689461)
chr3 (1-94)||(50258639-50258731)
chr3 (1-66)||(26279569-26279632)
chr3 (1-66)||(32319171-32319234)
chr3 (1-89)||(789940-790026)
chr3 (1-89)||(54574843-54574929)
chr3 (96-136)||(8420258-8420298)
chr3 (96-136)||(42453344-42453384)
[»] chr4 (52 HSPs)
chr4 (1-176)||(34027497-34027671)
chr4 (8-210)||(40089400-40089601)
chr4 (1-210)||(19498389-19498594)
chr4 (1-176)||(32128502-32128676)
chr4 (1-176)||(43455546-43455720)
chr4 (1-210)||(37777238-37777447)
chr4 (1-176)||(54083257-54083431)
chr4 (1-176)||(2790756-2790930)
chr4 (1-210)||(16882410-16882617)
chr4 (7-210)||(16844905-16845107)
chr4 (1-210)||(38352280-38352478)
chr4 (1-210)||(24969319-24969519)
chr4 (1-161)||(47128920-47129079)
chr4 (1-154)||(34768589-34768741)
chr4 (2-161)||(35779341-35779499)
chr4 (1-161)||(35465040-35465198)
chr4 (1-161)||(10978833-10978992)
chr4 (1-161)||(48209173-48209332)
chr4 (1-161)||(13460140-13460299)
chr4 (1-137)||(38209606-38209741)
chr4 (36-161)||(23509846-23509972)
chr4 (1-161)||(10428212-10428379)
chr4 (1-95)||(54780777-54780869)
chr4 (1-105)||(5128857-5128960)
chr4 (1-105)||(32915374-32915477)
chr4 (1-105)||(37514648-37514751)
chr4 (50-137)||(55255226-55255314)
chr4 (1-105)||(1105521-1105624)
chr4 (5-89)||(4167910-4167992)
chr4 (1-63)||(17679432-17679492)
chr4 (1-89)||(24396940-24397026)
chr4 (1-89)||(52468292-52468378)
chr4 (1-68)||(16922344-16922409)
chr4 (7-89)||(37744931-37745011)
chr4 (1-89)||(27112036-27112122)
chr4 (1-89)||(36118473-36118559)
chr4 (96-137)||(36118590-36118631)
chr4 (96-136)||(2135451-2135491)
chr4 (96-136)||(37746854-37746894)
chr4 (96-136)||(39329525-39329565)
chr4 (1-83)||(36178684-36178764)
chr4 (1-66)||(29425189-29425252)
chr4 (1-66)||(39655269-39655332)
chr4 (1-66)||(40217261-40217324)
chr4 (1-81)||(36362886-36362964)
chr4 (1-53)||(51691930-51691980)
chr4 (7-67)||(51964736-51964794)
chr4 (1-34)||(55255316-55255349)
chr4 (96-136)||(15735030-15735070)
chr4 (96-136)||(30507205-30507245)
chr4 (96-136)||(36178607-36178647)
chr4 (96-136)||(40217164-40217204)
[»] chr1 (36 HSPs)
chr1 (1-176)||(13913495-13913671)
chr1 (1-172)||(19955645-19955815)
chr1 (1-176)||(27559561-27559735)
chr1 (1-210)||(1366893-1367100)
chr1 (1-176)||(9173038-9173212)
chr1 (1-210)||(17168844-17169054)
chr1 (1-210)||(40501805-40502013)
chr1 (1-161)||(23185366-23185525)
chr1 (1-168)||(44895584-44895744)
chr1 (1-161)||(4971633-4971792)
chr1 (1-137)||(9181020-9181155)
chr1 (1-210)||(51607454-51607661)
chr1 (1-154)||(5316626-5316778)
chr1 (1-161)||(50881369-50881528)
chr1 (1-137)||(44655704-44655839)
chr1 (1-121)||(5027528-5027647)
chr1 (1-105)||(14146295-14146398)
chr1 (1-105)||(3406413-3406516)
chr1 (1-105)||(3440304-3440407)
chr1 (1-105)||(6771786-6771889)
chr1 (50-137)||(27906779-27906867)
chr1 (1-95)||(16140061-16140153)
chr1 (1-105)||(41697152-41697255)
chr1 (5-80)||(21740956-21741029)
chr1 (1-89)||(38547051-38547137)
chr1 (7-84)||(5533329-5533404)
chr1 (1-86)||(38853537-38853620)
chr1 (36-89)||(33170771-33170824)
chr1 (96-136)||(39134856-39134896)
chr1 (1-89)||(26803960-26804043)
chr1 (7-89)||(39134744-39134824)
chr1 (7-89)||(43235791-43235871)
chr1 (1-34)||(27906744-27906777)
chr1 (1-89)||(45758506-45758592)
chr1 (1-68)||(6889644-6889709)
chr1 (1-68)||(6891490-6891555)
[»] chr7 (30 HSPs)
chr7 (1-210)||(20091296-20091504)
chr7 (1-210)||(24525700-24525907)
chr7 (1-210)||(10329425-10329632)
chr7 (7-210)||(23551092-23551294)
chr7 (7-210)||(47984991-47985192)
chr7 (1-210)||(48983859-48984067)
chr7 (1-176)||(19692007-19692181)
chr7 (5-176)||(38414895-38415065)
chr7 (1-176)||(8239598-8239774)
chr7 (1-154)||(8171554-8171706)
chr7 (47-151)||(25010371-25010476)
chr7 (1-137)||(18776781-18776916)
chr7 (1-125)||(29077184-29077307)
chr7 (1-105)||(10955468-10955571)
chr7 (1-105)||(12596302-12596405)
chr7 (1-84)||(9021815-9021896)
chr7 (1-68)||(26254015-26254080)
chr7 (1-67)||(33162354-33162418)
chr7 (1-78)||(6765696-6765771)
chr7 (1-89)||(2611277-2611363)
chr7 (96-136)||(7398380-7398420)
chr7 (96-136)||(17800354-17800394)
chr7 (1-84)||(23859079-23859160)
chr7 (1-84)||(28749716-28749796)
chr7 (96-136)||(23859002-23859042)
chr7 (1-89)||(7398452-7398538)
chr7 (6-78)||(23744808-23744878)
chr7 (1-89)||(36891579-36891665)
chr7 (96-136)||(26917815-26917855)
chr7 (96-136)||(27237556-27237596)
[»] chr2 (33 HSPs)
chr2 (1-176)||(10762581-10762755)
chr2 (1-210)||(27506756-27506964)
chr2 (7-176)||(9045941-9046109)
chr2 (1-176)||(24410347-24410523)
chr2 (7-176)||(26716040-26716208)
chr2 (1-161)||(29939878-29940037)
chr2 (86-210)||(8327543-8327669)
chr2 (1-137)||(3155168-3155303)
chr2 (1-137)||(4505845-4505980)
chr2 (1-127)||(6964968-6965093)
chr2 (1-137)||(8907095-8907230)
chr2 (1-137)||(12337464-12337599)
chr2 (1-105)||(3952989-3953092)
chr2 (1-105)||(7162767-7162870)
chr2 (1-89)||(16097008-16097094)
chr2 (1-69)||(34693995-34694061)
chr2 (1-69)||(34716407-34716473)
chr2 (1-84)||(24035561-24035642)
chr2 (5-63)||(5952735-5952791)
chr2 (1-66)||(13800560-13800624)
chr2 (1-63)||(40636164-40636224)
chr2 (9-89)||(28425734-28425812)
chr2 (1-89)||(38400798-38400884)
chr2 (96-136)||(10252335-10252375)
chr2 (10-81)||(12134065-12134134)
chr2 (96-136)||(24035679-24035719)
chr2 (96-136)||(29694312-29694352)
chr2 (1-31)||(8327674-8327704)
chr2 (36-89)||(37182670-37182723)
chr2 (96-136)||(11912892-11912932)
chr2 (96-136)||(12134174-12134214)
chr2 (96-136)||(37182598-37182638)
chr2 (96-136)||(38400726-38400766)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-168)||(106459-106625)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-161)||(1271-1430)
[»] scaffold1590 (1 HSPs)
scaffold1590 (1-83)||(274-354)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-89)||(206505-206591)
[»] scaffold1320 (2 HSPs)
scaffold1320 (8-89)||(1355-1434)
scaffold1320 (96-136)||(1285-1325)
[»] scaffold0018 (2 HSPs)
scaffold0018 (1-89)||(173526-173612)
scaffold0018 (96-136)||(173644-173684)
[»] scaffold0022 (4 HSPs)
scaffold0022 (7-89)||(40086-40166)
scaffold0022 (7-89)||(138146-138226)
scaffold0022 (96-136)||(40012-40052)
scaffold0022 (96-136)||(138072-138112)
[»] scaffold0182 (1 HSPs)
scaffold0182 (1-66)||(24009-24072)
[»] scaffold0001 (1 HSPs)
scaffold0001 (40-105)||(181903-181969)
[»] scaffold0097 (1 HSPs)
scaffold0097 (1-89)||(38926-39012)
[»] scaffold0007 (2 HSPs)
scaffold0007 (96-136)||(230993-231033)
scaffold0007 (1-84)||(230875-230956)
[»] scaffold0227 (1 HSPs)
scaffold0227 (36-89)||(16028-16081)
[»] scaffold0003 (1 HSPs)
scaffold0003 (11-66)||(351360-351413)


Alignment Details
Target: chr6 (Bit Score: 154; Significance: 7e-82; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 235240 - 235448
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccaccaacac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  235240 tttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacccccaccaacac 235339  T
Q  101 caaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtact 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||||||        ||||||||||||||||    
T  235340 caaaagcaagaggacctaattctaataggcctaaaagactaaaacaa-gggacagaaaatggttgagggtattaaaaaaaatttggagggcagtagtact 235438  T
Q  201 agtgggtatt 210  Q
    ||||||||||    
T  235439 agtgggtatt 235448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 28075873 - 28075665
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  28075873 tttatattttttaaaagataaatataaggtgccg--tatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 28075776  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||        ||||| |||||||||    
T  28075775 ccaaaaacaagaggacctaattctaataggcataaaaggctaaaacaaggagacagaaaatggctgggggtattaaaaaaaaattggaggacagtagtac 28075676  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  28075675 tagtgggtatt 28075665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 27788704 - 27788911
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  27788704 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 27788801  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||        ||||||||||| |||    
T  27788802 ccaaaagcaagatgacctaattttaataggcctaaaagactaaaataaggggacagaaaatggttgggggtattaaa-aaaaattggagggcagtaatac 27788900  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  27788901 tagtgggtatt 27788911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 17354044 - 17353870
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||| ||||||||||| | |||||||||||  |||||||||| ||||    
T  17354044 tttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccccacctaaca 17353947  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17353946 ccaaaagcaagaggacctaattctaatagacctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 17353870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 20711736 - 20711910
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| | ||||    
T  20711736 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccatctaaca 20711833  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
      |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  20711834 ttaaaagcaagatgacctaattctaataggcctaaaagattaaaacaaggggacagaaaatggctgggggtattaaa 20711910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 34397947 - 34397773
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||| ||||||| |||||| |||||||| | |||| ||||||| |||| ||||  ||||    
T  34397947 tttatattttttaaaagataaatacaaggtgacg--tatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgaggaacctccacttaaca 34397850  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  34397849 ccaaaagcaagaagacctaattctaataggcctaaaaggctaaaacaagaggacagaaaatggttgggggtattaaa 34397773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 19737708 - 19737867
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||| ||||||| | ||||||||||||| |||||||||||||| |||||||||| ||||    
T  19737708 tttatatttttttaaagataaatacaaggtgccg--tatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 19737805  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||| |||||||| |||||| |||||  ||||||||||||||||||| ||||||||||||    
T  19737806 ccaaaatcaagaggaactaattttaataatcctaaaaggctaaaacaagaggacagaaaatg 19737867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 210
Target Start/End: Complemental strand, 19987207 - 19987043
Alignment:
Q  47 gtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 145  Q
    ||||||||||| |||||||||   ||| ||||||| || || ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19987207 gtacacccaaatgtgaaaatggttaccatatacataaggaatccccacctaacaccaaaagcaagatgacctaattctaataggcctaaaaggctaaaac 19987108  T
Q  146 aaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtactagtgggtatt 210  Q
    |||||||| ||||||||||||||||||||||        | ||||||||||||||||||||||||    
T  19987107 aaggggacggaaaatggctgggggtattaaaaaaaaattgaagggcagtagtactagtgggtatt 19987043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 13727415 - 13727550
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  13727415 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 13727512  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  13727513 ccaaaatcaagaggaactaattctaataatcctaaaag 13727550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 21479584 - 21479449
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  21479584 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 21479487  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  21479486 ccaaaatcaagaggaactaattctaataatcctaaaag 21479449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 33774207 - 33774072
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||    
T  33774207 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccacctaaca 33774110  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  33774109 ccaaaatcaagaggaactaattctaataatcctaaaag 33774072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 21280635 - 21280500
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| |||| |||||||| |||||||||||||| ||| |||||| ||||    
T  21280635 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaactcccacctaaca 21280538  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  21280537 ccaaaatcaagaggaactaattctaataatcctaaaag 21280500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24711015 - 24711118
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||  |||||| || ||||||||||||| |||||||||||||| |||||||||| ||||    
T  24711015 tttatattttttaaaagataaatacaaggtgccg--tatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 24711112  T
Q  100 ccaaaa 105  Q
    ||||||    
T  24711113 ccaaaa 24711118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1155865 - 1155946
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||||||||||||||||||||||| |||||| |   ||||||||| ||||| ||| ||||||||||||| ||||||||||||||    
T  1155865 tttatattttttaaaagataaatacaaggtgtca--tatatatgcggtacatccagaggtgaaaatgactaccgtatacatgag 1155946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 30832540 - 30832643
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||| ||||||||||| ||||||| ||| ||||  |||||||||  ||||||||| || |||||||||| ||||||| |||||| |||||||||| ||||    
T  30832540 tttacattttttaaaaaataaatacaagatgcc--gtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacctaaca 30832637  T
Q  100 ccaaaa 105  Q
    ||||||    
T  30832638 ccaaaa 30832643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2477600 - 2477686
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||| |   |||||||||  |||||| ||| |||||||| || |||||||||||||| ||||    
T  2477600 tttaaattttttaaaagataaatacaaggtgaca--tatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 2477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21183691 - 21183777
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| || ||   | |||||||||  |||||||||||| ||||||| || |||||||||||||| ||||    
T  21183691 tttaaattttttaaaagataaatacaaagt--agcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacc 21183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27314194 - 27314259
Alignment:
Q  1 tttatattttttaaaa-gataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatg 67  Q
    |||||||||||||||| |||||||| ||||||||  |||||||||| |||||| || |||||||||||    
T  27314194 tttatattttttaaaaagataaatacaaggtgcc--gtatatatgcggtacactcagaggtgaaaatg 27314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6159528 - 6159453
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtata 78  Q
    |||||||||||||||||||||||| || ||| |  |||||||||| |||||  |||||||| |||| || ||||||||    
T  6159528 tttatattttttaaaagataaatacaatgtgtc--gtatatatgcggtacattcaaaggtggaaatcactaccgtata 6159453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 4037031 - 4036957
Alignment:
Q  8 tttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    ||||||| ||||||||| |||||||||  ||||||||  |||||||||||||| || || || |||||||| |||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatg--gtacacccaaaggtaaagatcactaccgtatatatgag 4036957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 20611875 - 20611794
Alignment:
Q  6 attttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||||||| |||||||| |||||| ||  |||||| | |  ||| |||||||||||||| || |||||||||||||| ||||    
T  20611875 attttttaaacgataaatacaaggtgtcgtatatatacgac--acatccaaaggtgaaaatcactaccgtatacatgaggaacc 20611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 30121746 - 30121706
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||||||||  |||||||||| |||||||    
T  30121746 aacaccaaaagcaagaggacccgattctaatagacctaaaa 30121706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 7e-76; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 42600869 - 42600661
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  42600869 tttatattttttaaaagataaatataaggtgccg--tatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 42600772  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||        |||||||||||||||    
T  42600771 ccaaaagcaagaagacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctggggttattaaattttttttggagggcagtagtac 42600672  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  42600671 tagtgggtatt 42600661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 10917478 - 10917270
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||| ||||    
T  10917478 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacccccacctaaca 10917381  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        | || ||||||||||    
T  10917380 ccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaattttttttgaagagcagtagtac 10917281  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  10917280 tagtgggtatt 10917270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 23798277 - 23798484
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||    
T  23798277 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaaca 23798374  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||        ||||||||||| |||    
T  23798375 ccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggttgggggtattaaa-aacaattggagggcagtaatac 23798473  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  23798474 tagtgggtatt 23798484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23606645 - 23606797
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||| ||||    
T  23606645 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacctaaca 23606742  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggaca 154  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23606743 ccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggaca 23606797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 45475904 - 45475745
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  45475904 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaaca 45475807  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  45475806 ccaaaagcaagaggaactaattctaataggcctaaaaggctaaaacaagaggacagaaaatg 45475745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41879268 - 41879109
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| ||||| |||  ||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  41879268 tttatattttttaaaagataaatacaaggtaccg--tatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccccacctaaca 41879171  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||| |||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  41879170 ccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 41879109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 13534703 - 13534861
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| ||| |||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  13534703 tttatattttttaaaagataaatacaag-tgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 13534799  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||| |||||| | ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  13534800 ccaaaatcaagagaaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 13534861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 13624243 - 13624401
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| ||| |||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  13624243 tttatattttttaaaagataaatacaag-tgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 13624339  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||| |||||| | ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  13624340 ccaaaatcaagagaaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 13624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 5860760 - 5860895
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||| ||| ||||    
T  5860760 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaaccccaacctaaca 5860857  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  5860858 ccaaaatcaagaggaactaattctaataatcctaaaag 5860895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 30883416 - 30883281
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  30883416 tttatattttttaaaagataaatacaatgtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 30883319  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  30883318 ccaaaatcaagaggaactaattctaataatcctaaaag 30883281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 2952237 - 2952372
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| ||||||||| || |||||||||| |||||||||||||| |||||||||| ||||    
T  2952237 tttatattttttaaaagataaatacaaagtgccg--tatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaaca 2952334  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  2952335 ccaaaatcaagaggaactaattctaataatcctaaaag 2952372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 3048533 - 3048668
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| ||||||||  |||||||||| ||||||| | || |||||||||| |||||||||| ||| ||||| |||| ||||    
T  3048533 tttatattttttaaaagataaatacaaggtgcc--gtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacctaaca 3048630  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  3048631 ccaaaatcaagaggaactaattctaataatcctaaaag 3048668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 37430174 - 37430261
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaaccc 90  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||  |||||| | |||| |||||||| |||||||||||||| |||||    
T  37430174 tttatattttttaaaagataaatacaaggtgcc--gtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaaccc 37430261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7944538 - 7944624
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||| ||||||| |||||||||  ||||||||  |||||||||||||||||||| || |||||||||||||| ||||    
T  7944538 tttaaattttttaaaaaataaatacaaggtgccg--tatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 7944624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8102999 - 8102913
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| ||||||| |  ||||||||| ||||||| |||||||||||| |  |||||||||||||| ||||    
T  8102999 tttaaattttttaaaagataaatacaaggtgcag--tatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacc 8102913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11290271 - 11290185
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||| ||  ||||||||  |||||| ||||||||||||| || |||||||||||||| ||||    
T  11290271 tttaaattttttaaaagataaatacaaggtgtcg--tatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaacc 11290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 5942777 - 5942697
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||||||||||||||| ||| || ||  ||||| ||| |||||||||||||||||||| || |||||||||||||| ||||    
T  5942777 ttttttaaaagataaatacaagatgtcg--tatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 5942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 15078838 - 15078759
Alignment:
Q  8 tttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    ||||||||||||||||||||||||| |  |||||||||  |||||||||| |||||||| || | |||||||||||| ||||    
T  15078838 tttttaaaagataaatataaggtgctg--tatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 34789888 - 34789962
Alignment:
Q  11 ttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaa 87  Q
    |||||||||||||| ||| || ||  ||||||||  |||||||||||||||||||| || |||||||||||||||||    
T  34789888 ttaaaagataaatacaagatgtcg--tatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagaaa 34789962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 25561640 - 25561680
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  25561640 aacaccaaaagcaagaggacccaattctaataggcctaaaa 25561680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 8102883 - 8102845
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaa 134  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  8102883 aacaccaaaagcaagaggacccaattctaataggcctaa 8102845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15167431 - 15167517
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| |||||||||||||||||||||| |||  |  |||||||||  |||||||||| |||||||| || | |||||||||||| ||||    
T  15167431 tttaaattttttaaaagataaatataaagtgttg--tatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 8646169 - 8646129
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  8646169 aacaccaaaagcaagatgacctaattcgaataggcctaaaa 8646129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 15167547 - 15167587
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  15167547 aacaccaaaagtaagaggacccaattctaataggcctaaaa 15167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 41677307 - 41677347
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  41677307 aacaccaaaagcaagaggacccgattctaataggcctaaaa 41677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 5721640 - 5721560
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||||||||||||||| ||||||||   ||||||  | ||||||||||| |||||||| || ||||||||| |||| ||||    
T  5721640 ttttttaaaagataaatacaaggtgccc--tatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacc 5721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 39332427 - 39332507
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    ||||| |||||||||||| |||||| |   |||||| || ||||| |||||||||||||| || |||||||||||||| ||||    
T  39332427 tttttaaaaagataaatacaaggtgtca--tatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 39332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 30674427 - 30674482
Alignment:
Q  9 ttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaat 66  Q
    ||||||||||||||||||||||| |  ||||||||||  ||||| |||||||||||||    
T  30674427 ttttaaaagataaatataaggtgtc--gtatatatgcgatacactcaaaggtgaaaat 30674482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5973123 - 5973209
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||| |  |||||||||  ||||||||| || ||||||| |  |||||||||| ||| ||||    
T  5973123 tttaaattttttaaaagataaatacaaggtgtc--gtatatatgttgtacacccatagatgaaaatcattaccgtatacacgaggaacc 5973209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8646292 - 8646207
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||  ||  |||||||||  ||||| |||| |||||||| || ||||||||||| |||||||    
T  8646292 tttaaattttttaaaagataaatacaaggtatcg--tatatatgca-tacacgcaaatgtgaaaatcactaccgtatacataagaaacc 8646207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 11290150 - 11290113
Alignment:
Q  99 accaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  11290150 accaaaagcaacaggacccaattctaataggcctaaaa 11290113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 7944656 - 7944696
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||  |||| ||||||||||||||    
T  7944656 aacaccaaaagcaagaggacacaattttaataggcctaaaa 7944696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14509999 - 14510084
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtg-aaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||| |||||||||||| ||    ||||| | ||||||||||| ||| ||||| || |||||||||||||| ||||    
T  14509999 tttaaattttttaaaagacaaatataaggtgtcg----tatatacggtacacccaaatgtgaaaaatcactaccgtatacatgagtaacc 14510084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 15078729 - 15078689
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||| ||||||||| |||||||| ||||||||||    
T  15078729 aacaccaaaagtaagaggacccaattctaacaggcctaaaa 15078689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 7e-76; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 16198807 - 16199015
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||  |||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  16198807 tttatattttttaaaagataaatataaggtgtcg--tatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 16198904  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||     
T  16198905 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaattggagggcagtagtat 16199004  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  16199005 tagtgggtatt 16199015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 38869376 - 38869550
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  38869376 tttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaaca 38869473  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  38869474 ccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatgactgggggtattaaa 38869550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 9364378 - 9364170
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  9364378 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 9364281  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
     |||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||        |||| ||||||||||    
T  9364280 tcaaaagcaagaggacctaattctaatagacctaaaagactaaaacaaggggacataaaatggctgggggtattaaaaaaaaattggagagcagtagtac 9364181  T
Q  200 tagtgggtatt 210  Q
    |||||| ||||    
T  9364180 tagtggatatt 9364170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 7671005 - 7670806
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaa 105  Q
    ||||||||||||||||||||||||||||  ||||| | | ||||||||||||||||||||||| ||||||||||||||  | ||||||| ||||||||||    
T  7671005 ttttttaaaagataaatataaggtgccg--tatatttacggtacacccaaaggtgaaaatgactaccgtatacatgaggtatccccacctaacaccaaaa 7670908  T
Q  106 gcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtactagtgg 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| |||||||||||||||    
T  7670907 gcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaattggaggacagtagtactagtgg 7670808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 40389549 - 40389723
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||| ||||| ||||||||||||||||| |||||||  ||||| |||||||||| ||||    
T  40389549 tttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaacccccacctaaca 40389646  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40389647 ctaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 40389723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 28822355 - 28822522
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||  |||||||||| ||||    
T  28822355 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacccccacctaaca 28822452  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctggggg 169  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  28822453 ccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacataaaatggttggggg 28822522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 27924169 - 27923961
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||| |||||||| |||||||| |||||||||||||| ||| ||| || ||||    
T  27924169 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaacgcccgcctaaca 27924072  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||||||        |||||||||||||||    
T  27924071 ccaaaagcaaaaggacctaattctaataggcctaaaagactaaaacaaggagacagaaaatggttggggatattaaaaaaaaattggagggcagtagtac 27923972  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  27923971 tagtgggtatt 27923961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 16799340 - 16799513
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||| |||||||||||||||||  ||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||  ||||    
T  16799340 tttatattttttaaaaaataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacataaca 16799437  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||    
T  16799438 ccaaaagcaagaggacctaattctaatagacctaaaagactaaaacaaggggaca-aaaaaggctgggggtattaaa 16799513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 27079098 - 27078939
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||| ||||||||||||||| || ||||||||||| |||||||||| ||||    
T  27079098 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacccccacctaaca 27079001  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    ||||||   |||||| ||||||| ||||  ||||||||||||||||||| ||||||||||||    
T  27079000 ccaaaatatagaggaactaattccaataatcctaaaaggctaaaacaagaggacagaaaatg 27078939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30854416 - 30854258
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| |||||| || ||||||||||||| | |||||||||||| |||||||||| ||||    
T  30854416 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacccccacctaaca 30854319  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    ||||||  ||||||| ||||||||||||  ||||||||||||||||||| ||||| ||||||    
T  30854318 ccaaaa-taagaggaactaattctaataatcctaaaaggctaaaacaagaggacataaaatg 30854258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 16592087 - 16592243
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||| ||||||||||||| | |||| ||  ||||||||| ||||||||| ||||||||||||| |||||||| ||||| |||||||||| ||||    
T  16592087 tttatattttctaaaagataaatacagggtgtcg--tatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacctaaca 16592184  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaa 158  Q
    |||||| |||||||| ||||||||||||  |||||||||||||||||||  ||||||||    
T  16592185 ccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagatgacagaaa 16592243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 34756379 - 34756514
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  34756379 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 34756476  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
     ||||| |||||||| ||||||||||||  ||||||||    
T  34756477 acaaaatcaagaggaactaattctaataatcctaaaag 34756514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19523286 - 19523183
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| ||| |||||||||| |||||||||| ||||    
T  19523286 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacccccacctaaca 19523189  T
Q  100 ccaaaa 105  Q
    ||||||    
T  19523188 ccaaaa 19523183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36187892 - 36187995
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||| ||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||    
T  36187892 tttatattttttaaaatataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacctaaca 36187989  T
Q  100 ccaaaa 105  Q
    ||||||    
T  36187990 ccaaaa 36187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 2274977 - 2274874
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||  ||  ||||||||| ||||||||| ||||||||||||| |||||||||| ||| |||||||||| ||||    
T  2274977 tttatattttttaaaagataaatacaaggtatcg--tatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacctaaca 2274880  T
Q  100 ccaaaa 105  Q
    ||||||    
T  2274879 ccaaaa 2274874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 15480102 - 15480205
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| ||| || ||  ||||||||| ||||||||| ||||||||||||| ||||||| |||||| |||||||||| ||||    
T  15480102 tttatattttttaaaagataaatacaagatgtcg--tatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaaca 15480199  T
Q  100 ccaaaa 105  Q
    ||||||    
T  15480200 ccaaaa 15480205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 22986574 - 22986719
Alignment:
Q  4 atattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccaccaacaccaa 103  Q
    ||||||||||||||| ||||| || ||| ||  ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||          | ||    
T  22986574 atattttttaaaagacaaatacaaagtgtcg--tatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaacc----------caaa 22986661  T
Q  104 aagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    ||  ||||||| ||||||||||||  ||||||| ||||||||||| ||||||||||||    
T  22986662 aattaagaggaactaattctaataatcctaaaatgctaaaacaagaggacagaaaatg 22986719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 23284075 - 23284164
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaaccccc 92  Q
    |||||||||||||||   |||||| |||||| ||  ||||||||| |||||||||||| |||||||||| |||||||||||||| |||||||    
T  23284075 tttatattttttaaagactaaatacaaggtgtcg--tatatatgcggtacacccaaagatgaaaatgactaccgtatacatgaggaaccccc 23284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31194625 - 31194705
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||||||||||||||||||||||| ||||||||  |||||||||| ||| ||||| |||||||||| || ||||||||||||||    
T  31194625 tttatattttttaaaagataaatacaaggtgcc--gtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgag 31194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7338086 - 7338021
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatga 68  Q
    |||||||||||||||||||||||| |||||| |  |||||||||| ||||||| ||||||||||||||    
T  7338086 tttatattttttaaaagataaatacaaggtgtc--gtatatatgcggtacacctaaaggtgaaaatga 7338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 36868895 - 36868970
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||||||||||||||||| |||||| ||  ||||||||  ||||||||||| |||||||| || ||||||||||||||    
T  36868895 ttttttaaaagataaatacaaggtgtcg--tatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgag 36868970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 10543755 - 10543682
Alignment:
Q  6 attttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacat 81  Q
    ||||||||||||||||||||||||||  |  |||||||||  |||| |||||||||||||| || |||||||||||    
T  10543755 attttttaaaagataaatataaggtgatg--tatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 11242449 - 11242489
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  11242449 aacaccaaaagcaagaggacccaattctaataggcataaaa 11242489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 15639615 - 15639575
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  15639615 aacaccaaaagtaagaggacccaattctaataggcctaaaa 15639575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24395826 - 24395745
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||| ||||||||||||||||||| ||||||  |  ||||||| |  |||| |||||||||||||| ||||||||||| |||||    
T  24395826 tttaaattttttaaaagataaatacaaggtgttg--tatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgag 24395745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31881447 - 31881527
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||||||||||||||||||||||| | ||||||  |||||||||| | ||| ||| || ||||||| || ||||||||||||||    
T  31881447 tttatattttttaaaagataaatacacggtgcc--gtatatatgcggaacatccagagatgaaaat-actaccgtatacatgag 31881527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 34425872 - 34425832
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  34425872 aacaccaaaagcaagaggactcaattctaataggcctaaaa 34425832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 2530916 - 2530996
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||||||||||||||| || ||| ||  ||||||| | ||||| |||||||||||||| || || ||||||||||| ||||    
T  2530916 ttttttaaaagataaatacaatgtgtcg--tatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacc 2530996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14318398 - 14318484
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||| |  |||||||||   |||| |||||  ||||||| || |||||||||||||| ||||    
T  14318398 tttaaattttttaaaagataaatacaaggtgtc--gtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgaggaacc 14318484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 26718969 - 26719043
Alignment:
Q  8 tttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    ||||||||||||||||| || ||| ||  |||||||||  ||||| ||||||||||||| || |||| |||||||||    
T  26718969 tttttaaaagataaatacaaagtgtcg--tatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 26988713 - 26988787
Alignment:
Q  8 tttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    ||||||||||||||||| || ||| ||  |||||||||  ||||| ||||||||||||| || |||| |||||||||    
T  26988713 tttttaaaagataaatacaaagtgtcg--tatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26988787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33037867 - 33037781
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| ||| |  |  |||||||||  |||||||||||||||||||  |  |||||||||||||| ||||    
T  33037867 tttaaattttttaaaagataaatacaagatatc--gtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgaggaacc 33037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 40794385 - 40794426
Alignment:
Q  48 tacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||| |||||||||||| || |||||||||||||||||||    
T  40794385 tacaccaaaaggtgaaaatcactaccgtatacatgagaaacc 40794426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2024655 - 2024736
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||| ||||||| ||||||||||| || ||||||  ||||||||   ||||||||||| ||||||| || ||| ||||||||||    
T  2024655 tttaaatttttttaaagataaatacaatgtgccg--tatatatgtgatacacccaaagatgaaaatcactaccatatacatgag 2024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 2024771 - 2024811
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||  |||||||||| ||||||||    
T  2024771 aacaccaaaagcaagaggactcaattctaatatgcctaaaa 2024811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 7079601 - 7079561
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||| ||||||||||| ||||||||||||||||| ||||||    
T  7079601 aacatcaaaagcaagatgacctaattctaataggtctaaaa 7079561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 34425985 - 34425904
Alignment:
Q  6 attttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    ||||||||||||||||||| ||||||||  |||||||||   |||||| |||| | ||||| |  |||||||||||||| ||||    
T  34425985 attttttaaaagataaatacaaggtgcc--gtatatatgtgatacacctaaagattaaaatcattaccgtatacatgaggaacc 34425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 40794456 - 40794496
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||| ||||||||| |||||||||| ||||||||    
T  40794456 aacaccaaaagtaagaggacccaattctaataagcctaaaa 40794496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 53506900 - 53507107
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  53506900 tttatattttttaaaagataaatataaggtaccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaaca 53506997  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||        |||||||||||||||    
T  53506998 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacataaaatggttgggggtattaaa-aaaaattggagggcagtagtac 53507096  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  53507097 tagtgggtatt 53507107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 44708567 - 44708359
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||| | ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  44708567 tttatattttttaaaagataaatataaggtgccg--tatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 44708470  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        |||| ||||||||||    
T  44708469 ccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacataaaatggctgggggtattaaaaaaaaattggagagcagtagtac 44708370  T
Q  200 tagtgggtatt 210  Q
    |||||| ||||    
T  44708369 tagtggatatt 44708359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 54407174 - 54407381
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||||||| ||||    
T  54407174 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-agtaacccccacctaaca 54407270  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||        |||||||||||||||    
T  54407271 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaagaaggggacagaaaatagctgggggtattaaaaaaaaattggagggcagtagtac 54407370  T
Q  200 tagtgggtatt 210  Q
    |||| ||||||    
T  54407371 tagtaggtatt 54407381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 34290652 - 34290826
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||    
T  34290652 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaaca 34290749  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  34290750 ccaaaaacaagaggacctaattctaataggcctaaaaggctaaaacaaggggacataaaatggttgggggtattaaa 34290826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 43207254 - 43207427
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||| | ||||||||||||||| |||||||||||||| |||||||||| ||||    
T  43207254 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacatc-aaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 43207350  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43207351 ccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattaaa 43207427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 9878703 - 9878910
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||| | ||||||||| || |||||||| | |||     
T  9878703 tttatattttttaaaagataaatataaggtgcag--tatatatgcggtacacccaaaggtgaaaatgactatcgtatacataaggaacccccatctaacg 9878800  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||        ||||||||||| |||    
T  9878801 ccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattaaa-aaaaattggagggcagtaatac 9878899  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  9878900 tagtgggtatt 9878910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 37168457 - 37168248
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||  ||| ||||||||||||||||||| |||||||||||||| ||| |||||| ||||    
T  37168457 tttatattttttaaaagataaatataaggtgccg--tatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaaca 37168360  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtatt-aaannnnnnnnggagggcagtagta 198  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| |||        ||||||||||||||    
T  37168359 ctaaaagcaagaggacctaattataataggcctaaaaggctaaaacaaggggacataaaatagctgggggtattaaaaaaaaaattggagggcagtagta 37168260  T
Q  199 ctagtgggtatt 210  Q
    ||||||||||||    
T  37168259 ctagtgggtatt 37168248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 50939249 - 50939423
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||| |||||||| |||||||||||||| ||||||| || ||||    
T  50939249 tttatattttttaaaagataaatataaggtgccgtatatatatg--gtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccgcctaaca 50939346  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||    
T  50939347 ccaaaagcaaaaggacctaattctaataggcctaaaagactaaaacaaggagacagaaaatggctggggttattaaa 50939423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 3953912 - 3954071
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||  |||||||||||||| |||||||||| ||||    
T  3953912 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacctaaca 3954009  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||| |||||||| ||||||||||||  ||||||||||||||||||| | ||||||||||    
T  3954010 ccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagagaacagaaaatg 3954071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 8073354 - 8073512
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccaccaacac 100  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||    |||||    
T  8073354 tttatattttttaaaagataaatacaaggtgtcg--tatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaaccccacataacac 8073451  T
Q  101 caaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  8073452 caaaagcaataggaactaattctaataggcctaaaaggctaaaacaagaggacataaaatg 8073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 48157219 - 48157055
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| |||            |||||||||||||||||||||| || ||||||||||| |||||||||  ||||    
T  48157219 tttatattttttaaaagataaatataaggtggcgg------------tacacccaaaggtgaaaatgactactgtatacatgaggaacccccacttaaca 48157132  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
     ||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48157131 tcaaaagcaagaggacgtaattctagtaggcttaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 48157055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 54619219 - 54619354
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  54619219 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 54619316  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  54619317 ccaaaatcaagaggaactaattctaataatcctaaaag 54619354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 36716041 - 36716176
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||| ||||||||||||| ||||  ||||||||| ||||    
T  36716041 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagggacccccacctaaca 36716138  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  36716139 ccaaaatcaagaggaactaattctaataatcctaaaag 36716176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 27078585 - 27078720
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||| ||| ||||    
T  27078585 tttatattttttaaaagataaatacaaagtgccg--tatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccctacctaaca 27078682  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| ||||| || ||||||||||||  ||||||||    
T  27078683 ccaaaatcaagatgaactaattctaataatcctaaaag 27078720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 27084382 - 27084517
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||| ||| ||||    
T  27084382 tttatattttttaaaagataaatacaaagtgccg--tatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccctacctaaca 27084479  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| ||||| || ||||||||||||  ||||||||    
T  27084480 ccaaaatcaagatgaactaattctaataatcctaaaag 27084517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 38681109 - 38681244
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||| ||||| ||||| ||| ||||||||||||| |||||||||||||| || ||||||| ||||    
T  38681109 tttatattttttaaaagataaatacaaggtgccg--tatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaaccccacctaaca 38681206  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  38681207 ccaaaatcaagaggaactaattctaataatcctaaaag 38681244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21582861 - 21582758
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  21582861 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 21582764  T
Q  100 ccaaaa 105  Q
    ||||||    
T  21582763 ccaaaa 21582758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 47467774 - 47467671
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  |||||||||  |||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  47467774 tttatattttttaaaagataaatacaaggtgccg--tatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 47467677  T
Q  100 ccaaaa 105  Q
    ||||||    
T  47467676 ccaaaa 47467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18372573 - 18372427
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgcc----gtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc- 95  Q
    |||||||||||||||||||||||| |||||| ||  |||||||||     |||||| || ||||||||||||| |||||||||||||| || ||||| |     
T  18372573 tttatattttttaaaagataaatacaaggtgtcg--tatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaatccccatct 18372476  T
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaa 144  Q
    |||||||||| |||||||| ||||||||||||  |||||||||||||||    
T  18372475 aacaccaaaatcaagaggaactaattctaataatcctaaaaggctaaaa 18372427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 53149330 - 53149433
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| |||||| || || | |||||||| |||||||||||||| |||||||||| ||||    
T  53149330 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacccccacctaaca 53149427  T
Q  100 ccaaaa 105  Q
    ||||||    
T  53149428 ccaaaa 53149433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 42098891 - 42098803
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccc 91  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||| || || ||||||||||||| |||||||||||||| ||||||    
T  42098891 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacccc 42098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 29620423 - 29620539
Alignment:
Q  20 aaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggaccta 118  Q
    ||||| |||||||||  ||||||||| ||| | ||| ||||||||||||| |||||||||||||| |||||||||| ||||||| || |||||||| |||    
T  29620423 aaatacaaggtgccg--tatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccacaatcaagaggaacta 29620520  T
Q  119 attctaataggcctaaaag 137  Q
    ||| |||||  ||||||||    
T  29620521 attttaataatcctaaaag 29620539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36606055 - 36605974
Alignment:
Q  1 tttatattttttaaaa-gataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||||||||||||||| |||||||| ||||||||  |||||||||| ||||||||| || ||||||| || ||||||||||||||    
T  36606055 tttatattttttaaaaagataaatacaaggtgcc--gtatatatgcggtacacccagagatgaaaat-actaccgtatacatgag 36605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 29598080 - 29598040
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  29598080 aacaccaaaagcaagatgacctaattctaataggcctaaaa 29598040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 49393063 - 49393023
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  49393063 aacaccaaaagtaagaggacctaattctaataggcctaaaa 49393023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8420416 - 8420353
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaat 66  Q
    |||| ||||||||||||||||||| ||||||||  |||||||||  ||||||||||| ||||||||    
T  8420416 tttaaattttttaaaagataaatacaaggtgcc--gtatatatgttgtacacccaaatgtgaaaat 8420353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 49393179 - 49393097
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaa 86  Q
    |||| ||||||||||||||||||| |||| | ||  ||||||||  |||||||||||||| ||||| || ||||||||||||||||    
T  49393179 tttaaattttttaaaagataaatacaaggcgtcg--tatatatgt-gtacacccaaaggtaaaaattactaccgtatacatgagaa 49393097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 52374630 - 52374590
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  52374630 aacaccaaaagcaagaggactcaattctaataggcctaaaa 52374590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 28689389 - 28689461
Alignment:
Q  13 aaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaa 87  Q
    |||||||||||| |||||||||  |||||||||  || | |||||||||||||| ||  ||||||||||||||||    
T  28689389 aaaagataaatacaaggtgccg--tatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaa 28689461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 50258639 - 50258731
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacaccc-aaaggtgaaaatgaccaccgtatacatgagaaacccccac 94  Q
    |||||||||||||||| ||||||| |||||| |  |||||||||| ||||||||  | |||||||||||| |  |||| |||||| |||||||||    
T  50258639 tttatattttttaaaaaataaatacaaggtgtc--gtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgaggaacccccac 50258731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26279632 - 26279569
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaat 66  Q
    |||| ||||||||||||||||||| |||||| |  ||||||||||  ||||||||||| |||||||    
T  26279632 tttaaattttttaaaagataaatagaaggtgtc--gtatatatgcaatacacccaaagatgaaaat 26279569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32319171 - 32319234
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaat 66  Q
    |||| ||||||||||||||||||| || |||    |||||||||| ||||||||||||||||||||    
T  32319171 tttaaattttttaaaagataaatacaaagtg--ttgtatatatgcggtacacccaaaggtgaaaat 32319234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 790026 - 789940
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||  ||||||| |||||| |   ||||||||  |||||||||||||| ||||| |||||| |||||||||| ||||    
T  790026 tttaaattttttaaacaataaatacaaggtgtca--tatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgaggaacc 789940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 54574843 - 54574929
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| |||||| |||| ||||||| ||||| |||  ||||||||| ||||||||||| || ||||| || ||| |||||||||| ||||    
T  54574843 tttaaatttttcaaaatataaatacaaggtaccg--tatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacc 54574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 8420298 - 8420258
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||| ||| |||||||||| ||||||||    
T  8420298 aacaccaaaagcaagagaacccaattctaatatgcctaaaa 8420258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 42453384 - 42453344
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||| ||||||||  |||||||||||||||||||    
T  42453384 aacaccaaaagtaagaggactcaattctaataggcctaaaa 42453344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 34027671 - 34027497
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||| ||||    
T  34027671 tttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccacctaaca 34027574  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34027573 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 34027497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 8 - 210
Target Start/End: Complemental strand, 40089601 - 40089400
Alignment:
Q  8 tttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaag 106  Q
    |||||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||    
T  40089601 tttttaaaagataaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaag 40089504  T
Q  107 caagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtactagtggg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        |||||||| |||||||||||||    
T  40089503 caagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgagggtattaaaaaaaaattggagggcactagtactagtggg 40089404  T
Q  207 tatt 210  Q
    ||||    
T  40089403 tatt 40089400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 19498594 - 19498389
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||    ||||||| ||||| ||||||||||||||||| || ||||||||||| |||||||||| ||||    
T  19498594 tttatattttttaaaagataaatataaggtgccg----tatatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacctaaca 19498499  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||    
T  19498498 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagataatggctgggggtattaaa-aaaaattggagggcagtagtac 19498400  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  19498399 tagtgggtatt 19498389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 32128676 - 32128502
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  32128676 tttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacccccacctaaca 32128579  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||    
T  32128578 ccaaaagcaagaggacctaattctaataggcctaaaagactgaaacaaggggacataaaatggctgggggtattaaa 32128502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 43455546 - 43455720
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  43455546 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 43455643  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    || |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43455644 ccgaaagtaagaggacctaattcaaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattaaa 43455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 37777238 - 37777447
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| || | ||||    
T  37777238 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccctcaactaaca 37777335  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtatt-aaannnnnnnnggagggcagtagta 198  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||        ||||||||||||||    
T  37777336 ccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatagctggaggtattaaaaaaaaaattggagggcagtagta 37777435  T
Q  199 ctagtgggtatt 210  Q
    ||||||||||||    
T  37777436 ctagtgggtatt 37777447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 54083257 - 54083431
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||| | |||||||| |||||||||||||| |||||| ||| ||||    
T  54083257 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacccctacctaaca 54083354  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  54083355 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggagacagaaaatggctaggggtattaaa 54083431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 2790756 - 2790930
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||      
T  2790756 tttatattttttaaaagataaatataaggtaccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaatg 2790853  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  2790854 gcaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacataaaatggctgggggtattaaa 2790930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 16882410 - 16882617
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||| ||||||||||||||||||||||||||| ||||||| |  ||||||| ||||||||||||||| |||||||  ||| | ||||| |||| ||||    
T  16882410 tttatactttttaaaagataaatataaggtgccgtgtatatacg--gtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcacctaaca 16882507  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        ||||||||||| |||    
T  16882508 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatagctgggggtattaaa-aaaaattggagggcagtaatac 16882606  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  16882607 tagtgggtatt 16882617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 7 - 210
Target Start/End: Complemental strand, 16845107 - 16844905
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaa 105  Q
    ||||||||||||||||||||||||| ||  ||||||||  |||||||||| |||||||||||| |||||||||||||| |||||||||| ||||||||||    
T  16845107 ttttttaaaagataaatataaggtgtcg--tatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 16845010  T
Q  106 gcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtactagtgg 205  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||        ||||| ||||| |||||||||    
T  16845009 gcaagatgacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggtcgggggtattaaaaaaaaattggaggacagtaatactagtgg 16844910  T
Q  206 gtatt 210  Q
    |||||    
T  16844909 gtatt 16844905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 38352280 - 38352478
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| |||            |||||||||||||||||||||| ||||| |||||||| |||||||||| ||||    
T  38352280 tttatattttttaaaagataaatataaggtggcgg------------tacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacctaaca 38352367  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| |||||||||||    
T  38352368 ccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaattggaaggcagtagtac 38352467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 24969519 - 24969319
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| |||            |||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  24969519 tttatattttttaaaagataaatataaggtggcgg------------tacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 24969432  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtatt--aaannnnnnnnggagggcagtagt 197  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||        |||||||||||||    
T  24969431 ccaaaagcaagaggatctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaaaaattggagggcagtagt 24969332  T
Q  198 actagtgggtatt 210  Q
    |||||||||||||    
T  24969331 actagtgggtatt 24969319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 47129079 - 47128920
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| |||| |||||||| |||||||||||||| |||||||||| ||||    
T  47129079 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaaca 47128982  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||| |||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  47128981 ccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 47128920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 34768589 - 34768741
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||| ||||||||||||  |||||||||||||| |||||||||| ||||    
T  34768589 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacctaaca 34768686  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggaca 154  Q
    |||||| |||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  34768687 ccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggaca 34768741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 35779341 - 35779499
Alignment:
Q  2 ttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacac 100  Q
    ||||||||||||||||||||||| |||||| ||  ||||||||| ||||||||||||||||||||||  |||||||||||||| ||||  |||| ||||     
T  35779341 ttatattttttaaaagataaatacaaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccttcacctaacat 35779438  T
Q  101 caaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||    
T  35779439 caaaagcaagaggaactaattctaataggcctaaaaggctaaaacaagagggcagaaaatg 35779499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 35465198 - 35465040
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||| |||||||||| |||||||   |||||||||| ||||||| ||| |||||||| || |||||||||||||| || ||||||| ||||    
T  35465198 tttatattttttacaagataaataaaaggtgc---gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacctaaca 35465102  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35465101 ccaaaagcaacatgacctaattctaataggcctaaaaggctaaaacaagaggacagaaaatg 35465040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 10978992 - 10978833
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||| ||||||||| | ||||||||||| |||||||||||||| |||||||||| ||||    
T  10978992 tttatattttttaaaagataaatacaaggtgtcg--tatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacccccacctaaca 10978895  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||| |||||||| ||||||||||||  ||||||||||||||||||| | ||||||||||    
T  10978894 ccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagagaacagaaaatg 10978833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 48209332 - 48209173
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||||| ||||    
T  48209332 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacccccacctaaca 48209235  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||| ||||| || ||||||||||||  |||| |||||||||||||| ||||||||||||    
T  48209234 ccaaaatcaagaagaactaattctaataatcctataaggctaaaacaagaggacagaaaatg 48209173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13460299 - 13460140
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||| ||| ||||| | ||||||||||| ||||||||||| || |||||||||| ||||    
T  13460299 tttatattttttaaaagataaatacaaggtgtcg--tatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacctaaca 13460202  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||| |||||||| ||||||||||||  |||||||||||||||||||  |||||||||||    
T  13460201 ccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaagacagaaaatg 13460140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 38209606 - 38209741
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  38209606 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 38209703  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  38209704 ccaaaatcaagaggaactaattctaataatcctaaaag 38209741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 23509846 - 23509972
Alignment:
Q  36 gtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaa 134  Q
    |||||||||| ||||||| | ||||||||||||| |||||| ||||||| |||||||||| |||||||||| |||||||| ||||||||||||  |||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaa 23509945  T
Q  135 aaggctaaaacaaggggacagaaaatg 161  Q
    |||||||||||||| ||||||||||||    
T  23509946 aaggctaaaacaagaggacagaaaatg 23509972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 10428212 - 10428379
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaa--------atgaccaccgtatacatgagaaaccccc 92  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||        ||||| |||||||||||||| |||| ||    
T  10428212 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgaggaacctcc 10428309  T
Q  93 acc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    ||| |||||||||| |||||||| |||||| |||||  ||||||||||||||||||| ||||||||||||    
T  10428310 acctaacaccaaaatcaagaggaactaattataataatcctaaaaggctaaaacaagaggacagaaaatg 10428379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 54780869 - 54780777
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc 95  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  54780869 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 54780777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5128857 - 5128960
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| || |||||| ||||||||||||| |||||||||||||| |||| ||||| ||||    
T  5128857 tttatattttttaaaagataaatacaaggtgccg--tatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctccacctaaca 5128954  T
Q  100 ccaaaa 105  Q
    ||||||    
T  5128955 ccaaaa 5128960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32915477 - 32915374
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||  ||||||||| |||| |||||||  |||||||||||||| |||||||||| ||||    
T  32915477 tttatattttttaaaagataaatacaaggtgccg--tatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacccccacctaaca 32915380  T
Q  100 ccaaaa 105  Q
    ||||||    
T  32915379 ccaaaa 32915374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 37514751 - 37514648
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| |||||| || ||||||||||||| |||||||||||||  || ||||||| ||||    
T  37514751 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaagaatccccacctaaca 37514654  T
Q  100 ccaaaa 105  Q
    ||||||    
T  37514653 ccaaaa 37514648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 55255314 - 55255226
Alignment:
Q  50 cacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||  ||||||||    
T  55255314 cacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaag 55255226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 1105624 - 1105521
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||  ||  ||||||||| ||||||| | ||||||||||||| ||| |||||||||| |||||||||| ||||    
T  1105624 tttatattttttaaaagataaatacaaggtatcg--tatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacctaaca 1105527  T
Q  100 ccaaaa 105  Q
    ||||||    
T  1105526 ccaaaa 1105521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 4167910 - 4167992
Alignment:
Q  5 tattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||||||||||||||||| |||||||||  |||||||||  ||||||||||||||||||| || ||| |||||||||| ||||    
T  4167910 tattttttaaaagataaatacaaggtgccg--tatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacc 4167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17679492 - 17679432
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaa 63  Q
    |||||||||||||||||||||||| ||||||||  |||||||||| ||||||||| |||||||    
T  17679492 tttatattttttaaaagataaatacaaggtgcc--gtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24397026 - 24396940
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| |||||||||||||||||||||||||||   |||||||||   ||||| ||||||||||||| || | |||||||||||| ||||    
T  24397026 tttaaattttttaaaagataaatataaggtgc--agtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgaggaacc 24396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 52468378 - 52468292
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| ||||||||  |||||||||   |||| |||||||||||||| || ||||||| |||||| ||||    
T  52468378 tttaaattttttaaaagataaatacaaggtgcc--gtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacc 52468292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16922344 - 16922409
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatga 68  Q
    ||||||||||||||||||||||||||| ||| |  |||||||||| |||  |||||||||||||||||    
T  16922344 tttatattttttaaaagataaatataaagtgtc--gtatatatgcagtatccccaaaggtgaaaatga 16922409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 37744931 - 37745011
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    ||||||||||||||||||||||||| |  | ||||||||  |||| |||||||||||||| || ||||||||| |||| ||||    
T  37744931 ttttttaaaagataaatataaggtgtc--gcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacc 37745011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27112122 - 27112036
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||| |   |||||||||  |||||| ||| |||||||| || |||||||||||||| ||||    
T  27112122 tttaaattttttaaaagataaatacaaggtgaca--tatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 27112036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36118473 - 36118559
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||| |  |||||||||   ||||||||||  ||||||| || |||||||||||||| ||||    
T  36118473 tttaaattttttaaaagataaatacaaggtgtc--gtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacc 36118559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 36118590 - 36118631
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  36118590 aacaccaaaagcaagatgacccaattctaataggcctaaaag 36118631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 2135451 - 2135491
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  2135451 aacaccaaaagcaagaggacccaattctaataagcctaaaa 2135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 37746854 - 37746894
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  37746854 aacaccaaaagcaagatgacccaattctaataggcctaaaa 37746894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 39329525 - 39329565
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  39329525 aacaccaaaagcaagaagaccaaattctaataggcctaaaa 39329565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 36178764 - 36178684
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatga 83  Q
    |||| ||| ||||||||||||||| |||||| |  ||||||||||  |||||||||| |||||||| || ||| |||||||||    
T  36178764 tttaaattatttaaaagataaatacaaggtgtc--gtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29425189 - 29425252
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaat 66  Q
    |||| ||||||||||| ||||||||||||||||  |||||||||| |||||   ||||||||||||    
T  29425189 tttaaattttttaaaaaataaatataaggtgcc--gtatatatgcagtacatttaaaggtgaaaat 29425252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39655269 - 39655332
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaat 66  Q
    |||| ||||||||||||||||||| || || |||   |||||||| ||||||||||||||||||||    
T  39655269 tttaaattttttaaaagataaatacaaagttccgc--atatatgcggtacacccaaaggtgaaaat 39655332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40217324 - 40217261
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaat 66  Q
    |||| |||||||||||||||||||||||||| |  ||||||||||  |||| |||||| |||||||    
T  40217324 tttaaattttttaaaagataaatataaggtgtc--gtatatatgcgatacatccaaagatgaaaat 40217261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36362886 - 36362964
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacat 81  Q
    |||| ||||||||||||||||||| || |||||  ||||||||||  |||||||||| ||| |||| || ||| |||||||    
T  36362886 tttaaattttttaaaagataaatacaaagtgcc--gtatatatgcaatacacccaaatgtggaaatcactaccatatacat 36362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 51691930 - 51691980
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacc 53  Q
    |||| ||||||||||||||||||| ||||||||  |||||||||| |||||||    
T  51691930 tttaaattttttaaaagataaatacaaggtgcc--gtatatatgcggtacacc 51691980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 51964794 - 51964736
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatg 67  Q
    ||||| |||||||||||| |||||||||  |||||||||  |||||||| |||||||||||    
T  51964794 tttttaaaaagataaatacaaggtgccg--tatatatgcgatacacccagaggtgaaaatg 51964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 55255349 - 55255316
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  55255349 tttatattttttaaaagataaatacaaggtgccg 55255316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 15735070 - 15735030
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||| |||| |||||||| ||||||||||    
T  15735070 aacaccaaaagcaagaagacccaattctaacaggcctaaaa 15735030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 30507205 - 30507245
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||  |||||| ||||||||||||    
T  30507205 aacaccaaaagcaagaggactcaattcttataggcctaaaa 30507245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 36178647 - 36178607
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||||||||  |||||||| |||||||||    
T  36178647 aacaccaaaagcaagaggacccgattctaatgggcctaaaa 36178607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 40217204 - 40217164
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||| | |||| |||||||||||||||||||    
T  40217204 aacaccaaaagcaaaatgacccaattctaataggcctaaaa 40217164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 13913495 - 13913671
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  13913495 tttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccccacctaaca 13913594  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  13913595 ccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaatgggacagaaaatggttgggggtattaaa 13913671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 19955815 - 19955645
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||    
T  19955815 tttatattttttaaaagataaatataaggtaccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaaca 19955718  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19955717 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtat 19955645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 27559735 - 27559561
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  27559735 tttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 27559638  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27559637 ccataagtaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 27559561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 1366893 - 1367100
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||| |||||||||| ||| |||||||||| ||||    
T  1366893 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacccccacctaaca 1366990  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||        ||||||||||| |||    
T  1366991 ccaaaagcaagatgacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctgggggtattaaa-aaattttggagggcagtaatac 1367089  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  1367090 tagtgggtatt 1367100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 9173038 - 9173212
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  9173038 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 9173135  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  9173136 ccaaaagtaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctggggatattaaa 9173212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 17169054 - 17168844
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||||||||||  |  ||||||||| ||||||||||||||||||||||| ||| |||||||||| |||||| ||| ||||    
T  17169054 tttatattttttaaaagataaatataaggtgttg--tatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacccctacctaaca 17168957  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtatt--aaannnnnnnnggagggcagtagt 197  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||        |||||||||||||    
T  17168956 ccaaaagcaagaagacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaagaaaattggagggcagtagt 17168857  T
Q  198 actagtgggtatt 210  Q
    |||||||||||||    
T  17168856 actagtgggtatt 17168844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 40501805 - 40502013
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||| |||||||| |||||||||||||  |||| ||||| ||||    
T  40501805 tttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctccacctaaca 40501902  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||    
T  40501903 ccaaaagcaagatgatctaattctaatagacctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaaaaaaatttagagggcagtagtac 40502002  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  40502003 tagtgggtatt 40502013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 23185525 - 23185366
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  23185525 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaaca 23185428  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  23185427 ccaaaagcaagaggaactaattctaataggcctaaaaggctaaaacaagaggacagaaaatg 23185366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 44895744 - 44895584
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| |||||         ||||||||||||||||||||||  |||||||||||||| |||||||||| ||||    
T  44895744 tttatattttttaaaagataaatataaggtggcgggtg--------gtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacctaaca 44895653  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggg 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44895652 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaagggacagaaaatggctgggg 44895584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 4971633 - 4971792
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| ||||| |||  ||||||||| ||||||||| | ||||||||||| |||||||||||||| |||||||||| ||||    
T  4971633 tttatattttttaaaagataaatacaaggtaccg--tatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacccccacctaaca 4971730  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  4971731 ccaaaagcaagaggaactaattctaataggcctaaaaggctaaaacaagaggacaaaaaatg 4971792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 9181020 - 9181155
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  9181020 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 9181117  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9181118 ccaaaagcaagaggacctaattctaataggcctaaaag 9181155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 51607454 - 51607661
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| | | ||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| |||| | || |    
T  51607454 tttatattttttaaaagataaatataaggtggccg-tatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactcccatctaata 51607552  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||        | |||||||||||||    
T  51607553 ccaaaagcaagaggacataattctaataggcctaaaaggctaaaa-aagggaacagaaaat-gctgggggtattaaaaaaaaattgaagggcagtagtac 51607650  T
Q  200 tagtgggtatt 210  Q
    |||||| ||||    
T  51607651 tagtggatatt 51607661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 5316778 - 5316626
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  5316778 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 5316681  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggaca 154  Q
    |||||| |||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  5316680 ccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggaca 5316626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 50881528 - 50881369
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||| ||||| | | ||||||||||||| || ||||||||||| |||| ||||| ||||    
T  50881528 tttatattttttaaaagataaatacaaggtgtcg--tatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctccacctaaca 50881431  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    ||||||  ||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  50881430 ccaaaattaagaggaactaattctaataatcctaaaaggctaaaacaagaggacagaaaatg 50881369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 44655839 - 44655704
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||| ||||||||| |||| |||||||| |||||||||||||| |||||||||| ||||    
T  44655839 tttatattttttaaaagataaatacaaggtgtcg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaaca 44655742  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  44655741 ccaaaatcaagaggaactaattctaataatcctaaaag 44655704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 5027647 - 5027528
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| ||| |||| ||||| |||||||||| ||||    
T  5027647 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacccccacctaaca 5027550  T
Q  100 ccaaaagcaagaggacctaatt 121  Q
    ||||||||||||||| ||||||    
T  5027549 ccaaaagcaagaggaactaatt 5027528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 14146398 - 14146295
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| || |||||||||| |||||||||||||| |||||||||| ||||    
T  14146398 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaaca 14146301  T
Q  100 ccaaaa 105  Q
    ||||||    
T  14146300 ccaaaa 14146295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3406516 - 3406413
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| |||||| |  ||||||||||||| |||||||||||||| |||||||||| ||||    
T  3406516 tttatattttttaaaagataaatacaaggtgccg--tatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 3406419  T
Q  100 ccaaaa 105  Q
    ||||||    
T  3406418 ccaaaa 3406413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 3440304 - 3440407
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| |||||| |  ||||||||||||| |||||||||||||| |||||||||| ||||    
T  3440304 tttatattttttaaaagataaatacaaggtgccg--tatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 3440401  T
Q  100 ccaaaa 105  Q
    ||||||    
T  3440402 ccaaaa 3440407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 6771889 - 6771786
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||| ||| |||| ||||| ||||    
T  6771889 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctccacctaaca 6771792  T
Q  100 ccaaaa 105  Q
    ||||||    
T  6771791 ccaaaa 6771786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 27906779 - 27906867
Alignment:
Q  50 cacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||| |||||||| ||||||||||||  ||||||||    
T  27906779 cacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaagaggaactaattctaataatcctaaaag 27906867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 16140153 - 16140061
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc 95  Q
    |||||||||||||||||||||||| ||||||  |  ||||||||| ||||||| | ||||||||||||| |||||||||||||| || |||||||    
T  16140153 tttatattttttaaaagataaatacaaggtgttg--tatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacc 16140061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 41697152 - 41697255
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| || ||  |  |||||||||| ||||| ||| | ||||||||||| |||||||||||||| |||||||||| ||||    
T  41697152 tttatattttttaaaagataaatacaaagtatc--gtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacctaaca 41697249  T
Q  100 ccaaaa 105  Q
    ||||||    
T  41697250 ccaaaa 41697255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 21740956 - 21741029
Alignment:
Q  5 tattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtataca 80  Q
    |||||||||||||||||||| ||||||||  ||||||||||  |||||||| ||||||||||||| ||| ||||||    
T  21740956 tattttttaaaagataaatacaaggtgcc--gtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38547051 - 38547137
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| ||||||||  |||||||||  ||||||||||| |||||||| || | | |||||||||| ||||    
T  38547051 tttaaattttttaaaagataaatacaaggtgcc--gtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaacc 38547137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 5533404 - 5533329
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||||||||||||||| | |||||||||  ||||||||  |||||  ||||||||||||| || ||||||||||||||    
T  5533404 ttttttaaaagataaacacaaggtgccg--tatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 38853620 - 38853537
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaa 86  Q
    |||| |||||||||| |||||||| |||||| ||  ||||||||  ||| | |||||||||||||| || ||||||||||||||||    
T  38853620 tttaaattttttaaatgataaatacaaggtgtcg--tatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgagaa 38853537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 33170824 - 33170771
Alignment:
Q  36 gtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||||||| ||||||| || ||||||||| || |||||||||||||||||||    
T  33170824 gtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaacc 33170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 39134856 - 39134896
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  39134856 aacaccaaaagcaagaggacccaattctaataggcttaaaa 39134896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26804043 - 26803960
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| ||| || ||  |||||||||  |||||   ||||||||||| || |||||||||||||||||||    
T  26804043 tttaaattttttaaaagataaatacaagatgtcg--tatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaaacc 26803960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 39134744 - 39134824
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    ||||| |||||||||||| ||||||| |  |||||||||  ||||||||||||||| ||| || || ||||||||||| ||||    
T  39134744 tttttaaaaagataaatacaaggtgctg--tatatatgcaatacacccaaaggtgataatcactactgtatacatgaggaacc 39134824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 43235791 - 43235871
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||| ||||||||||| ||| || ||  ||||||||  |||||||||||||||||||| || | |||||||||||| ||||    
T  43235791 tttttttaaagataaatacaagatgtcg--tatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacc 43235871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 27906744 - 27906777
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  27906744 tttatattttttaaaagataaatacaaggtgccg 27906777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 45758592 - 45758506
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||  ||||||  |  ||||||||   |||| |||||||||||||| || |||||||||||||| ||||    
T  45758592 tttaaattttttaaaagataaatgcaaggtgttg--tatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaacc 45758506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6889709 - 6889644
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatga 68  Q
    |||||||||||||||||||||||| || ||  |  |||||||||| ||||| ||| ||||||||||||    
T  6889709 tttatattttttaaaagataaatacaaagtatc--gtatatatgcggtacatccagaggtgaaaatga 6889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6891555 - 6891490
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatga 68  Q
    |||||||||||||||||||||||| || ||  |  |||||||||| ||||| ||| ||||||||||||    
T  6891555 tttatattttttaaaagataaatacaaagtatc--gtatatatgcggtacatccagaggtgaaaatga 6891490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 20091296 - 20091504
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  20091296 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 20091393  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||        |||||||||||||||    
T  20091394 ccaaaagtaagaggacctaattctaataggcctaaaaggctaaaacaagggtacataaaatggttgggggtattaaaaaaaaattggagggcagtagtac 20091493  T
Q  200 tagtgggtatt 210  Q
    | |||||||||    
T  20091494 tggtgggtatt 20091504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 24525700 - 24525907
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||||||||||||| ||||||  || ||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||    
T  24525700 tttatattttttaaaagataaatataaggtgccgtgtatat--gcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaaca 24525797  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||        |||||||||||||||    
T  24525798 ccaaaagcaagaggacctaattctaatatgcctaaaaggctaaaacaagggggcagaaaatggctgggggtattaaa-aaaaattggagggcagtagtac 24525896  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  24525897 tagtgggtatt 24525907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 10329425 - 10329632
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||  | | ||||||||||||||||||| ||||||||||||||||||||||||  ||||    
T  10329425 tttatattttttaaaagataaatataaggtgccg--tatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacccccacttaaca 10329522  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||        |||||||||||||||    
T  10329523 ccaaaagcaagaggacctaattctaataggcgtaaaaggctaaaacaaggggacaaaaaatggctgggggtattaaa-aaatattggagggcagtagtac 10329621  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  10329622 tagtgggtatt 10329632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 210
Target Start/End: Original strand, 23551092 - 23551294
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaa 105  Q
    ||||||||||||||||||||||||| ||  ||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||    
T  23551092 ttttttaaaagataaatataaggtgtcg--tatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 23551189  T
Q  106 gcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtactagtgg 205  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||        |||||||||||||||||||||    
T  23551190 gcaagaggacctaattctaataggcctaaaaagctaaaacaaggggacaaaaaatggctaggggtattaaattttttttggagggcagtagtactagtgg 23551289  T
Q  206 gtatt 210  Q
    |||||    
T  23551290 gtatt 23551294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 7 - 210
Target Start/End: Original strand, 47984991 - 47985192
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaa 105  Q
    |||||||||||| |||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  47984991 ttttttaaaagaaaaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacccccacctaacacaaaaa 47985088  T
Q  106 gcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtactagtgg 205  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||        ||||||||||| |||||||||    
T  47985089 gcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggctggggatattaaa-aaaaattggagggcagtaatactagtgg 47985187  T
Q  206 gtatt 210  Q
    |||||    
T  47985188 gtatt 47985192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 48983859 - 48984067
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||| || |||||||||||||| |||||||||| ||||    
T  48983859 tttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacccccacctaaca 48983956  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||        |||||||||||||||    
T  48983957 ccaaaagtaagaggacttaattctaataggcctaaaaggctaaaacaagggtacaaaaaatggttgggggtattaaaaaaaaattggagggcagtagtac 48984056  T
Q  200 tagtgggtatt 210  Q
    |||||||||||    
T  48984057 tagtgggtatt 48984067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 19692181 - 19692007
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||||||||||||   ||||||||| ||||||| |||||||||||||||   |||||||||||| ||||| | || ||||    
T  19692181 tttatattttttaaaagataaatataaggtgcca--tatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaaccctcgcctaaca 19692084  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  19692083 ccaaaagcaagaggacctaattctaataggcctaaaagactaaaacaaggggacagaaaatggttgggggtattaaa 19692007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 38414895 - 38415065
Alignment:
Q  5 tattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaa 103  Q
    ||||||||||||||||||||||||||| ||  ||||||||  ||||||||||||||||||||||| || ||||||||||| |||||||||| ||||||||    
T  38414895 tattttttaaaagataaatataaggtgacg--tatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaa 38414992  T
Q  104 aagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||||    
T  38414993 aagcaagaggacctaattctaataggcctaaaagactaaaacaagggaatagaaaatggctgagggtattaaa 38415065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 8239774 - 8239598
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccc--cacc-aa 97  Q
    |||||||||||||||| |||||||||| ||||||  ||||||||  ||||||||||| ||||||||||  |||||||| ||||| ||||||  |||  ||    
T  8239774 tttatattttttaaaaaataaatataatgtgccg--tatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccctccacttaa 8239677  T
Q  98 caccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  8239676 caccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacaacaaatggttgggggtattaaa 8239598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 8171554 - 8171706
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| || |||||||||| |||||||||||||| |||||||||| ||||    
T  8171554 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaaca 8171651  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggaca 154  Q
    |||||| |||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  8171652 ccaaaatcaagaggaactaattctaataatcctaaaaggctaaaacaagaggaca 8171706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 25010476 - 25010371
Alignment:
Q  47 gtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 145  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25010476 gtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaac 25010377  T
Q  146 aagggg 151  Q
    ||||||    
T  25010376 aagggg 25010371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 18776781 - 18776916
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||| ||||    
T  18776781 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacccccacctaaca 18776878  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  18776879 ccaaaaacaagaggaactaattctaataatcctaaaag 18776916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 29077307 - 29077184
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||| ||||||| | ||||||||||||| |||||||||||||| |||||||||| ||||    
T  29077307 tttatattttttaaaagataaatacaaggtgtcg--tatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 29077210  T
Q  100 ccaaaagcaagaggacctaattctaa 125  Q
    |||||| |||||||| ||||||||||    
T  29077209 ccaaaatcaagaggaactaattctaa 29077184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 10955571 - 10955468
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| |||||| || ||||||||||||| |||||||||||||| |||||||||| ||||    
T  10955571 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 10955474  T
Q  100 ccaaaa 105  Q
    ||||||    
T  10955473 ccaaaa 10955468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12596302 - 12596405
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||  ||||||||| ||||||||||||| ||||||| |||||| |||||||||| ||||    
T  12596302 tttatatttttttaaagataaatacaaggtgccg--tatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaaca 12596399  T
Q  100 ccaaaa 105  Q
    ||||||    
T  12596400 ccaaaa 12596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9021815 - 9021896
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||| ||||||||||||||||||| || ||||||  ||||||||| |||||||||||||||||||| || ||||||||||||||    
T  9021815 tttaaattttttaaaagataaatacaatgtgccg--tatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgag 9021896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26254080 - 26254015
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatga 68  Q
    |||||||||||||||||||||||| ||||||||  |||||||||| |||||||||||| |||||||||    
T  26254080 tttatattttttaaaagataaatacaaggtgcc--gtatatatgcggtacacccaaagatgaaaatga 26254015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33162354 - 33162418
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatg 67  Q
    |||||||||||||||||||||||| ||||||||  |||||||||| ||||||| |||||||||||||    
T  33162354 tttatattttttaaaagataaatacaaggtgcc--gtatatatgcggtacacctaaaggtgaaaatg 33162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6765696 - 6765771
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtata 78  Q
    |||| ||||||||||||||||||| |||||| ||  |||||| |||||||| |||||||||||||| || ||||||||    
T  6765696 tttaaattttttaaaagataaatacaaggtgtcg--tatataagccgtacatccaaaggtgaaaatcactaccgtata 6765771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2611277 - 2611363
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||| ||  ||||||||| |||||| ||| ||||||||| || || ||||||||||| ||||    
T  2611277 tttaaattttttaaaagataaatacaaggtgtcg--tatatatgcggtacacacaatggtgaaaatcacaactgtatacatgaggaacc 2611363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 7398420 - 7398380
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  7398420 aacaccaaaagcaagaggacccaattctaataggcctaaaa 7398380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 17800354 - 17800394
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  17800354 aacaccaaaagcaagaggacccaattctaataggcctaaaa 17800394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 23859160 - 23859079
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||| ||||||||||||||||||| || || |||  |||||||||  ||||||||||| ||||||| || ||||||||||||||    
T  23859160 tttaaattttttaaaagataaatacaatgtaccg--tatatatgcgatacacccaaagatgaaaattactaccgtatacatgag 23859079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 28749796 - 28749716
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    ||||||||||| |||||||||||| ||||||||  |||||||||| |||||| || | |||||||| || ||||||||||||||    
T  28749796 tttatatttttgaaaagataaatacaaggtgcc--gtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgag 28749716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 23859042 - 23859002
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  23859042 aacaccaaatgcaagaggacccaattctaataggcctaaaa 23859002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7398538 - 7398452
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||| ||||||||||| ||||||||   ||||||||   |||||| |||||||||||| || ||| |||||||||| ||||    
T  7398538 tttaaattttttgaaagataaatacaaggtgcca--tatatatgtgatacacctaaaggtgaaaatcactaccatatacatgaggaacc 7398452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 23744878 - 23744808
Alignment:
Q  6 attttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtata 78  Q
    ||||||||||||||||||| ||||||||  | |||||||| ||||||| |||| | ||||| || ||||||||    
T  23744878 attttttaaaagataaatacaaggtgcc--gcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36891665 - 36891579
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    ||||||||||||||| ||| |||| || |||    |||||||| | ||||| |||||||||||||| || |||||||||||||| ||||    
T  36891665 tttatattttttaaatgatgaatacaatgtg--ttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 36891579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 26917815 - 26917855
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||| |||| |||||||||| ||||||||    
T  26917815 aacaccaaaagcaagaagacccaattctaataagcctaaaa 26917855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 27237556 - 27237596
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||| |||||||| |||| |||||||||||||||||||    
T  27237556 aacaccataagcaagatgacccaattctaataggcctaaaa 27237596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 6e-70; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 10762581 - 10762755
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  10762581 tttatattttttaaaagataaatataaggtgc--ggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 10762678  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10762679 ccaaatgcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgagggtattaaa 10762755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 27506756 - 27506964
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||| |||||||| || ||||||||||| ||| |||||| ||||    
T  27506756 tttatattttttaaaagataaatataaggtgccg--tatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaactcccacctaaca 27506853  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaannnnnnnnggagggcagtagtac 199  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||    
T  27506854 ccaaaagcaagatgacctaattctaataggcctaaaaggctaaaacaaggagacagaaaatggctgggggtattaaattttttttggagggcagtagtac 27506953  T
Q  200 tagtgggtatt 210  Q
    || ||||||||    
T  27506954 taatgggtatt 27506964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 7 - 176
Target Start/End: Complemental strand, 9046109 - 9045941
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaa 105  Q
    ||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| ||||    
T  9046109 ttttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacaaaaa 9046012  T
Q  106 gcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  9046011 gcaagaggacctaattctaataagcctaaaagactaaaacaaggggacataaaatagctgggggtattaaa 9045941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 24410523 - 24410347
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaaccccc-acc-aac 98  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||| |||    
T  24410523 tttatattttttaaaagataaatataaggtgccg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccccacctaac 24410426  T
Q  99 accaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaa-ggggacagaaaatggctgggggtattaaa 176  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  24410425 accaaaaacaagaggacctaattctaattggcctaaaaggctaaaacaagggggacagaaaatagctgggggtattaaa 24410347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 7 - 176
Target Start/End: Complemental strand, 26716208 - 26716040
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aacaccaaaa 105  Q
    |||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| ||||    
T  26716208 ttttttaaaagataaatataaggtgcca--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacaaaaa 26716111  T
Q  106 gcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggggtattaaa 176  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||    
T  26716110 gcaagagaacctaattctaataggtctaaaagactaaaacaaggggacataaaatggctgggggtattaaa 26716040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 29939878 - 29940037
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||| |||||||||| |||||| ||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||    
T  29939878 tttatattttttacaagataaatacaaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacctaaca 29939975  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  29939976 ccaaaagcaagaggaactaattctaatagacctaaaaggttaaaacaagaggacagaaaatg 29940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 86 - 210
Target Start/End: Complemental strand, 8327669 - 8327543
Alignment:
Q  86 aacccccacc-aacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctg-ggggtattaaannnnnnn 183  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||           
T  8327669 aacccccacctaacaccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctggggggtattaaaaaaaaat 8327570  T
Q  184 nggagggcagtagtactagtgggtatt 210  Q
     ||||||||||||||||||||||||||    
T  8327569 tggagggcagtagtactagtgggtatt 8327543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 3155303 - 3155168
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||| | ||||||||||||| |||||||||||||| |||||||||| ||||    
T  3155303 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 3155206  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  3155205 ccaaaatcaagaggaactaattctaataatcctaaaag 3155168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 4505980 - 4505845
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| ||||||||| |||| |||||||| |||||||||||||| |||||||||| ||||    
T  4505980 tttatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaaca 4505883  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  4505882 ccaaaatcaagaggaactaattctaataatcctaaaag 4505845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6965093 - 6964968
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  6965093 tttatattttttaaaagataaatacaaagtgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 6964996  T
Q  100 ccaaaagcaagaggacctaattctaata 127  Q
    |||||| |||||||| ||||||||||||    
T  6964995 ccaaaatcaagaggaactaattctaata 6964968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 8907095 - 8907230
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||| ||||  ||||||||| ||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||    
T  8907095 tttatattttttaaaagataaatacaaggcgccg--tatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccacctaaca 8907192  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| ||||||||  |||||||||||  ||||||||    
T  8907193 ccaaaatcaagaggaattaattctaataatcctaaaag 8907230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 12337464 - 12337599
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||| |   ||||||||  ||||||||| ||||||||||||| |||||||||||||| |||||||||| ||||    
T  12337464 tttatattttttaaaagataaatacaaggtgtca--tatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 12337561  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaag 137  Q
    |||||| |||||||| ||||||||||||  ||||||||    
T  12337562 ccaaaatcaagaggaactaattctaataatcctaaaag 12337599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3953092 - 3952989
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| |||||||||  |||| |||| ||||||||| ||||||||||||  ||||||| |||||| |||||||||| ||||    
T  3953092 tttatattttttaaaagataaatacaaggtgccg--tatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacccccacctaaca 3952995  T
Q  100 ccaaaa 105  Q
    ||||||    
T  3952994 ccaaaa 3952989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 7162870 - 7162767
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| ||||||||  |||||||||| ||| || || ||||||||||||| |||||||| ||||| |||||| ||| ||||    
T  7162870 tttatattttttaaaagataaatacaaggtgcc--gtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacccctacctaaca 7162773  T
Q  100 ccaaaa 105  Q
    ||||||    
T  7162772 ccaaaa 7162767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16097094 - 16097008
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||||||  ||||||||  |||||||||||||||||||| || ||| |||||||||| ||||    
T  16097094 tttaaattttttaaaagataaatacaaggtgccg--tatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacc 16097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34694061 - 34693995
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgac 69  Q
    |||||||||||||||||||||||| ||||||||  |||||||||  ||||||||| |||| ||||||||    
T  34694061 tttatattttttaaaagataaatacaaggtgcc--gtatatatgtggtacacccagaggtcaaaatgac 34693995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34716473 - 34716407
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgac 69  Q
    |||||||||||||||||||||||| ||||||||  |||||||||  ||||||||| |||| ||||||||    
T  34716473 tttatattttttaaaagataaatacaaggtgcc--gtatatatgtggtacacccagaggtcaaaatgac 34716407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24035561 - 24035642
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||| ||||||||||||||||||| ||||||||  ||||| ||||  |||||| |||||||||||| || |||| |||||||||    
T  24035561 tttaaattttttaaaagataaatacaaggtgcc--gtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgag 24035642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 5952735 - 5952791
Alignment:
Q  5 tattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaa 63  Q
    |||||||||||||||||||| ||||||||  |||||||||| ||||||||| |||||||    
T  5952735 tattttttaaaagataaatacaaggtgcc--gtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13800560 - 13800624
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacaccc-aaaggtgaaaat 66  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||  ||||||| ||||||||||||    
T  13800560 tttaaattttttaaaagataaatataaggtgcc--gtatatatgcgatacacccaaaaggtgaaaat 13800624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40636224 - 40636164
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaa 63  Q
    |||||||||||||||||||||||| |||||| |  |||||||||| ||||||||| |||||||    
T  40636224 tttatattttttaaaagataaatacaaggtgtc--gtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 28425734 - 28425812
Alignment:
Q  9 ttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||||||||||||| |||||| ||  ||||||||| ||||||||||| |||||||| || ||| |||| ||||| ||||    
T  28425734 ttttaaaagataaatacaaggtgtcg--tatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacc 28425812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38400884 - 38400798
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||| |   |||||||||  ||||  ||||||||||||| || |||||||||||||| ||||    
T  38400884 tttaaattttttaaaagataaatacaaggtgtca--tatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacc 38400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 10252375 - 10252335
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  10252375 aacaccaaaagcaagatgacccaattctaataggcctaaaa 10252335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 12134065 - 12134134
Alignment:
Q  10 tttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacat 81  Q
    ||||||||||||||| ||||| |||  |||||||||  |||||||||| |||||||| || |||||||||||    
T  12134065 tttaaaagataaatacaaggtaccg--tatatatgcgatacacccaaaagtgaaaatcactaccgtatacat 12134134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 24035679 - 24035719
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  24035679 aacactaaaagcaagaggacctaattctaatagacctaaaa 24035719  T

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Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 29694352 - 29694312
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  29694352 aacaccaaaagcaagaggacccaattctaataggtctaaaa 29694312  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 8327704 - 8327674
Alignment:
Q  1 tttatattttttaaaagataaatataaggtg 31  Q
    |||||||||||||||||||||||||||||||    
T  8327704 tttatattttttaaaagataaatataaggtg 8327674  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 37182723 - 37182670
Alignment:
Q  36 gtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    ||||||||||  |||||||||| |||||||| || |||||||||||||| ||||    
T  37182723 gtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacc 37182670  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 11912892 - 11912932
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||| ||||| |||| |||||||||||||||||||    
T  11912892 aacaccaaaatcaagatgacccaattctaataggcctaaaa 11912932  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 12134174 - 12134214
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  12134174 aacaccaaaagcaagagaactcaattctaataggcctaaaa 12134214  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 37182638 - 37182598
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||| ||||||||||| |||| |||||||||||||||||||    
T  37182638 aacagcaaaagcaagatgacccaattctaataggcctaaaa 37182598  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 38400766 - 38400726
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  38400766 aacaccaaaagcaagatgaccctattctaataggcctaaaa 38400726  T

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Target: scaffold0039 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 106625 - 106459
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  106625 tttatattttttaaaagataaatataaggtgtcg--tatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 106528  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatggctgggg 168  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  106527 ccaaaagcaagaggacctaaatctaataggcctaaaagactaaaacaaggggacataaaatggctgggg 106459  T

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Target: scaffold0070 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 1430 - 1271
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacccccacc-aaca 99  Q
    |||||||||||||||||||||||| ||| |||||  ||||||||| ||||||||| || |||||||||| |||||||||||||| |||||||||| ||||    
T  1430 tttatattttttaaaagataaatacaagctgccg--tatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaaca 1333  T
Q  100 ccaaaagcaagaggacctaattctaataggcctaaaaggctaaaacaaggggacagaaaatg 161  Q
    |||||| |||||||| |||||| |||||  ||||||||| ||||||||| ||||| ||||||    
T  1332 ccaaaatcaagaggaactaattttaataatcctaaaaggttaaaacaagaggacaaaaaatg 1271  T

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Target: scaffold1590 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 274 - 354
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatga 83  Q
    |||| ||||||||||||||||||| |||||| ||  ||||||||| ||||||||||| |||||||| || |||||||||||||    
T  274 tttaaattttttaaaagataaatacaaggtgtcg--tatatatgcggtacacccaaatgtgaaaatcactaccgtatacatga 354  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 206505 - 206591
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||| ||||||||||||| |||||| ||  ||||||||| |||||||||| ||||||||| || |||||||||||||| ||||    
T  206505 tttaaattttgtaaaagataaatacaaggtgtcg--tatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacc 206591  T

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Target: scaffold1320 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 1434 - 1355
Alignment:
Q  8 tttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    ||||||||||||||||||||||||| |  |||||||||  |||||||||| |||||||| || | |||||||||||| ||||    
T  1434 tttttaaaagataaatataaggtgctg--tatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 1355  T

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Target: scaffold1320; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 1325 - 1285
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||||||||| ||||||||| |||||||| ||||||||||    
T  1325 aacaccaaaagtaagaggacccaattctaacaggcctaaaa 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 173526 - 173612
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| ||||| |||  |||||||||  ||||||||||||| ||||| || ||||||||| |||| ||||    
T  173526 tttaaattttttaaaagataaatacaaggtaccg--tatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacc 173612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 173644 - 173684
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||||| |  |||||||||||||||||||    
T  173644 aacaccaaaagcaagaggtctcaattctaataggcctaaaa 173684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 40166 - 40086
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||||||||||||||| ||||||||  |||| ||||  |||||||| ||||||||||| || | |||||||||||| ||||    
T  40166 ttttttaaaagataaatacaaggtgcc--gtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacc 40086  T

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Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 138226 - 138146
Alignment:
Q  7 ttttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||||||||||||||||| ||||||||  |||| ||||  |||||||| ||||||||||| || | |||||||||||| ||||    
T  138226 ttttttaaaagataaatacaaggtgcc--gtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacc 138146  T

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Target: scaffold0022; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 40052 - 40012
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  40052 aacacaaaaagcaagaggacccaattctaataggcctaaaa 40012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 138112 - 138072
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  138112 aacacaaaaagcaagaggacccaattctaataggcctaaaa 138072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24009 - 24072
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaat 66  Q
    |||| ||||||||||||||||||| |||||| |  |||||||||| ||||||||||| ||||||||    
T  24009 tttaaattttttaaaagataaatacaaggtgtc--gtatatatgcggtacacccaaaagtgaaaat 24072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 181969 - 181903
Alignment:
Q  40 atatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaaccccca-ccaacaccaaaa 105  Q
    |||||| ||||| ||| ||||||||||||| |||||||||||||| |||||||| | ||||||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaacccccatctaacaccaaaa 181903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39012 - 38926
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||||||||||||||||| |||||| |  ||||||||||  ||||| |||| |||||||| || |||||||| ||||| ||||    
T  39012 tttaaattttttaaaagataaatacaaggtgtc--gtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacc 38926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 230993 - 231033
Alignment:
Q  96 aacaccaaaagcaagaggacctaattctaataggcctaaaa 136  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  230993 aacaccaaaagcaagaggacccgattctaataggcctaaaa 231033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 230875 - 230956
Alignment:
Q  1 tttatattttttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgag 84  Q
    |||| |||| ||||||||||||| |||||||  |  |||||||||  || |||||||||||||||| || ||| ||||||||||    
T  230875 tttaaatttgttaaaagataaatttaaggtgttg--tatatatgcgatatacccaaaggtgaaaatcactaccttatacatgag 230956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 16081 - 16028
Alignment:
Q  36 gtatatatgccgtacacccaaaggtgaaaatgaccaccgtatacatgagaaacc 89  Q
    |||| ||||| ||||| |||||| ||||||| || |||||||||||||||||||    
T  16081 gtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacc 16028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 351360 - 351413
Alignment:
Q  11 ttaaaagataaatataaggtgccgggtatatatgccgtacacccaaaggtgaaaat 66  Q
    |||||||||||||| |||||| ||  ||||||||  ||||||||||||||||||||    
T  351360 ttaaaagataaatacaaggtgtcg--tatatatgttgtacacccaaaggtgaaaat 351413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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