View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9331_high_19 (Length: 266)
Name: NF9331_high_19
Description: NF9331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9331_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 14 - 261
Target Start/End: Complemental strand, 18575249 - 18575002
Alignment:
| Q |
14 |
caactccaatacatgtgttaaagctctccttaagagtcccatgtttggaaattgacttaattcatgttgctatgagttacagaacaataggaaagaggtg |
113 |
Q |
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| T |
18575249 |
caactccaatacatgtgttaaagctctccttaagagtcccatgtttggaaattgacttaattcatgttgctatgagttacagaacaataggaaagaggtg |
18575150 |
T |
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| Q |
114 |
tcataaatgcccatttacctgcgaaaattctgaagtactttggagataaggatgcttgaggaatggcatcaaatcatttctcaaactatgaaggaatcta |
213 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18575149 |
tcataaatgctcatttacctgcgaaaattctgaagtactttggagataaggatgcttgaggaatggcatcaaatcatttctcaaactatgaaggaatcta |
18575050 |
T |
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| Q |
214 |
taacattgttcaccaacctgctctcatcgttgccgggtgttctgtgct |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18575049 |
taacattgttcaccaacctgctctcatcgttgccgggtgttctgtgct |
18575002 |
T |
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