View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9332_low_2 (Length: 485)
Name: NF9332_low_2
Description: NF9332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9332_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 442; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 12 - 469
Target Start/End: Complemental strand, 43627890 - 43627433
Alignment:
| Q |
12 |
tttggtggttgtcaatgcctgttggagagactagagatcatccattggctaatccatttggacatggaagtccaaatcttgaagaaatgaagcttgatcc |
111 |
Q |
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| T |
43627890 |
tttggaggttgtcaatgcctgttggagagactagagatcatccattggctaatccatttggacatggaagtccaaatcttgaagaaatgaagcttgatcc |
43627791 |
T |
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| Q |
112 |
cattttggtgatagttggtggcaatgaattgcttaaagatagggctgcaaattatgcaacaagattgaaaggaataggaaaagccattaaatacattgag |
211 |
Q |
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| T |
43627790 |
cattttggtgatagttggtggcaatgaattgcttaaagatagggctgcaaattatgcaacaagattgaaaggaataggaaaagacattaaatacattgag |
43627691 |
T |
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| Q |
212 |
tttgaggggtgtgaacatgggtttttcacgcatgattcatattcagaaactgcaaaagaggttctacatgtccttaaacaattcatgcttcaaacttcta |
311 |
Q |
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| T |
43627690 |
tttgaggggtgtgaacatgggtttttcacgcatgattcatattcagaaactgcgaaagaggttctacatgtccttaaacaattcatgcttcaaacttcta |
43627591 |
T |
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| Q |
312 |
catatccttaagtaatccatatttttagcctatattaaaatagtttgtaggattaaggaaataaataagtcattgttatcggtttgtagtttttagtgga |
411 |
Q |
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| T |
43627590 |
catatccttaagtaatccatatttttagcctatattaaaacagtttgtaggattaaggaaataaataagtcattgttatcggtttgtagtttttagtgga |
43627491 |
T |
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| Q |
412 |
gtttgtagttagctactatttttagtattttgtgttgtggtatataattgtcgattgt |
469 |
Q |
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| T |
43627490 |
gtttgtagttagctactatttttagtattttgtgttgtggtatataattgtcgattgt |
43627433 |
T |
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