View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9332_low_26 (Length: 255)
Name: NF9332_low_26
Description: NF9332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9332_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 34690989 - 34691227
Alignment:
| Q |
1 |
aactatcaaaactttatggatcataaaaaagaaactatgaatattgattttaattgctcaagcacttagagcatgacataacattaatataacaagctag |
100 |
Q |
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| T |
34690989 |
aactatcaaaactttatggatcataaaaaagaaactatgaatattgattttaattgctcaagcacttagagcatgacataacattaatataacaagctag |
34691088 |
T |
|
| Q |
101 |
caaccttaaataaaaaatgaagggaaataaagaatgagtgattaagtagtacttactggtcaagatttatgattctgttcttgcttcctgtaagatcttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34691089 |
caaccttaaataaaaaatgaagggaaataaagaatgagtgattaagtagtacttactggtcaagatttatgattctgttcttgcttcctgtaagatcttt |
34691188 |
T |
|
| Q |
201 |
acaagtagaattcttcaaagaagaagtggatgacataac |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
34691189 |
acaagtagaattcttcaaagaagaagtggatgacataac |
34691227 |
T |
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