View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9335_high_4 (Length: 205)

Name: NF9335_high_4
Description: NF9335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9335_high_4
NF9335_high_4
[»] chr5 (24 HSPs)
chr5 (4-159)||(27868578-27868739)
chr5 (4-159)||(33472564-33472728)
chr5 (4-98)||(18419339-18419433)
chr5 (63-166)||(10817758-10817871)
chr5 (31-81)||(21553475-21553525)
chr5 (63-159)||(23539711-23539817)
chr5 (31-79)||(43242596-43242644)
chr5 (31-81)||(21980153-21980203)
chr5 (31-81)||(36460960-36461009)
chr5 (119-166)||(22777063-22777110)
chr5 (31-79)||(22757903-22757952)
chr5 (119-162)||(8952038-8952081)
chr5 (115-166)||(18407937-18407988)
chr5 (115-166)||(19512397-19512448)
chr5 (115-162)||(23111197-23111244)
chr5 (115-166)||(28370048-28370099)
chr5 (4-58)||(41875703-41875757)
chr5 (4-45)||(22412974-22413015)
chr5 (31-79)||(1856567-1856614)
chr5 (31-79)||(6766673-6766720)
chr5 (119-159)||(21663143-21663183)
chr5 (31-79)||(21674537-21674584)
chr5 (119-159)||(22356904-22356944)
chr5 (115-159)||(22438748-22438792)
[»] chr3 (42 HSPs)
chr3 (1-159)||(10833309-10833473)
chr3 (4-159)||(42415-42579)
chr3 (4-159)||(16324541-16324705)
chr3 (4-159)||(13437126-13437290)
chr3 (4-159)||(18893570-18893733)
chr3 (18-158)||(17547473-17547622)
chr3 (7-97)||(15465985-15466075)
chr3 (4-97)||(43549727-43549820)
chr3 (7-97)||(5224213-5224303)
chr3 (7-160)||(26054434-26054596)
chr3 (63-160)||(29171852-29171957)
chr3 (63-159)||(17513775-17513879)
chr3 (63-180)||(34851278-34851405)
chr3 (141-201)||(3803845-3803905)
chr3 (31-81)||(11913711-11913761)
chr3 (31-79)||(12270568-12270616)
chr3 (31-79)||(19444576-19444624)
chr3 (31-79)||(19451142-19451190)
chr3 (31-81)||(13837055-13837105)
chr3 (31-75)||(10988901-10988945)
chr3 (31-79)||(14085521-14085569)
chr3 (31-79)||(14090922-14090970)
chr3 (31-79)||(14647118-14647166)
chr3 (31-79)||(49400521-49400569)
chr3 (4-58)||(10555194-10555248)
chr3 (31-81)||(51602611-51602661)
chr3 (4-58)||(55291712-55291766)
chr3 (119-159)||(23392820-23392860)
chr3 (119-163)||(52337952-52337996)
chr3 (115-166)||(9534338-9534389)
chr3 (4-58)||(3803701-3803755)
chr3 (4-58)||(46722697-46722751)
chr3 (4-58)||(54521650-54521704)
chr3 (118-163)||(14819091-14819136)
chr3 (126-171)||(18929267-18929312)
chr3 (31-79)||(30123463-30123512)
chr3 (4-45)||(50243700-50243741)
chr3 (119-163)||(3393751-3393795)
chr3 (119-159)||(18366515-18366555)
chr3 (31-79)||(24122343-24122390)
chr3 (4-44)||(24152509-24152549)
chr3 (119-159)||(52212432-52212472)
[»] chr8 (24 HSPs)
chr8 (4-159)||(8413749-8413913)
chr8 (4-159)||(11775601-11775765)
chr8 (4-159)||(19882835-19882999)
chr8 (7-97)||(14396982-14397072)
chr8 (4-97)||(25483513-25483606)
chr8 (74-159)||(18023477-18023571)
chr8 (31-81)||(364779-364829)
chr8 (31-81)||(20387402-20387451)
chr8 (31-81)||(20494436-20494486)
chr8 (31-81)||(22433701-22433751)
chr8 (31-81)||(42559541-42559591)
chr8 (31-79)||(3698592-3698641)
chr8 (31-76)||(23826130-23826175)
chr8 (119-163)||(32950911-32950955)
chr8 (31-75)||(44432851-44432895)
chr8 (115-162)||(23482050-23482097)
chr8 (31-73)||(15635191-15635232)
chr8 (31-73)||(21325861-21325902)
chr8 (4-45)||(17460331-17460372)
chr8 (4-45)||(20455874-20455915)
chr8 (4-45)||(20463082-20463123)
chr8 (4-45)||(23661184-23661225)
chr8 (129-166)||(38184689-38184726)
chr8 (118-166)||(22919964-22920012)
[»] chr6 (29 HSPs)
chr6 (4-159)||(23225858-23226022)
chr6 (4-159)||(13765234-13765398)
chr6 (4-159)||(31021721-31021886)
chr6 (4-143)||(23956750-23956898)
chr6 (7-97)||(23415795-23415885)
chr6 (7-97)||(27557553-27557643)
chr6 (31-201)||(1268-1446)
chr6 (31-201)||(8227-8405)
chr6 (31-79)||(8759532-8759580)
chr6 (31-79)||(8767279-8767327)
chr6 (31-81)||(1254747-1254797)
chr6 (31-73)||(1588658-1588700)
chr6 (31-81)||(34296279-34296329)
chr6 (145-201)||(22347521-22347578)
chr6 (31-79)||(14593717-14593765)
chr6 (119-163)||(18659444-18659488)
chr6 (141-184)||(21470807-21470850)
chr6 (141-184)||(21477307-21477350)
chr6 (4-58)||(12943017-12943071)
chr6 (144-201)||(17026357-17026415)
chr6 (121-162)||(24441669-24441710)
chr6 (31-75)||(7430512-7430556)
chr6 (31-73)||(15816757-15816798)
chr6 (115-164)||(4477868-4477917)
chr6 (4-45)||(14978665-14978706)
chr6 (4-45)||(20556156-20556197)
chr6 (110-159)||(25469705-25469754)
chr6 (119-163)||(13750275-13750319)
chr6 (145-184)||(29266381-29266421)
[»] chr4 (32 HSPs)
chr4 (4-166)||(45005832-45006000)
chr4 (4-159)||(28386131-28386295)
chr4 (4-81)||(18230628-18230705)
chr4 (129-201)||(17143260-17143331)
chr4 (63-180)||(13447475-13447602)
chr4 (98-159)||(15712695-15712757)
chr4 (63-180)||(2584124-2584251)
chr4 (31-81)||(56114848-56114898)
chr4 (63-159)||(4830158-4830264)
chr4 (63-159)||(4833453-4833559)
chr4 (31-81)||(24046566-24046616)
chr4 (4-58)||(16277398-16277452)
chr4 (4-58)||(36038698-36038752)
chr4 (4-58)||(53387008-53387062)
chr4 (31-79)||(11201492-11201540)
chr4 (31-79)||(11208223-11208271)
chr4 (33-73)||(15415974-15416013)
chr4 (119-166)||(6512632-6512679)
chr4 (119-162)||(10705741-10705784)
chr4 (119-162)||(10919511-10919554)
chr4 (125-171)||(3338381-3338427)
chr4 (31-73)||(16370815-16370856)
chr4 (4-58)||(33849630-33849684)
chr4 (4-45)||(13043893-13043934)
chr4 (4-45)||(23802528-23802569)
chr4 (119-163)||(8711543-8711587)
chr4 (31-79)||(14049519-14049566)
chr4 (123-163)||(14931123-14931163)
chr4 (115-159)||(15408150-15408194)
chr4 (106-158)||(16370724-16370776)
chr4 (31-79)||(30147856-30147903)
chr4 (4-48)||(49547064-49547108)
[»] chr7 (34 HSPs)
chr7 (4-158)||(16107860-16108023)
chr7 (4-159)||(11661993-11662157)
chr7 (4-159)||(14188294-14188458)
chr7 (5-98)||(42374375-42374468)
chr7 (7-97)||(1856472-1856562)
chr7 (7-97)||(13917644-13917734)
chr7 (7-97)||(25926371-25926461)
chr7 (4-97)||(13648169-13648262)
chr7 (4-81)||(13256580-13256657)
chr7 (63-159)||(29005016-29005120)
chr7 (63-162)||(3288756-3288865)
chr7 (98-180)||(21733837-21733920)
chr7 (98-180)||(21734396-21734479)
chr7 (70-159)||(14190892-14190990)
chr7 (31-79)||(38829050-38829098)
chr7 (31-73)||(15727461-15727503)
chr7 (31-79)||(19617285-19617333)
chr7 (119-171)||(40554506-40554558)
chr7 (31-81)||(15214468-15214518)
chr7 (4-58)||(17505075-17505129)
chr7 (4-58)||(17548085-17548139)
chr7 (31-79)||(27565818-27565866)
chr7 (115-166)||(11311069-11311120)
chr7 (4-58)||(11304075-11304129)
chr7 (115-165)||(11382865-11382915)
chr7 (115-165)||(11389342-11389392)
chr7 (4-58)||(14105538-14105592)
chr7 (4-58)||(14415555-14415609)
chr7 (115-164)||(16009587-16009636)
chr7 (4-45)||(16462956-16462997)
chr7 (4-45)||(18455712-18455753)
chr7 (31-79)||(14152965-14153012)
chr7 (115-159)||(21230960-21231004)
chr7 (146-185)||(41781021-41781061)
[»] chr2 (18 HSPs)
chr2 (4-159)||(41300930-41301094)
chr2 (4-159)||(21072689-21072853)
chr2 (18-158)||(6477238-6477387)
chr2 (7-97)||(31346010-31346100)
chr2 (63-166)||(22703923-22704036)
chr2 (31-81)||(10039147-10039197)
chr2 (31-76)||(21132671-21132716)
chr2 (31-79)||(201611-201659)
chr2 (31-79)||(6743385-6743433)
chr2 (115-166)||(23265153-23265204)
chr2 (115-166)||(23280221-23280272)
chr2 (4-58)||(20590393-20590447)
chr2 (4-58)||(23338510-23338564)
chr2 (4-58)||(13100845-13100899)
chr2 (4-45)||(22173101-22173142)
chr2 (4-45)||(43707171-43707212)
chr2 (126-166)||(21908381-21908421)
chr2 (31-79)||(43694391-43694438)
[»] scaffold0453 (1 HSPs)
scaffold0453 (4-159)||(7014-7175)
[»] scaffold0422 (1 HSPs)
scaffold0422 (4-159)||(3851-4012)
[»] scaffold0001 (2 HSPs)
scaffold0001 (7-159)||(176683-176844)
scaffold0001 (7-83)||(169330-169406)
[»] chr1 (21 HSPs)
chr1 (4-159)||(28313236-28313400)
chr1 (18-158)||(13527716-13527865)
chr1 (4-97)||(45574091-45574184)
chr1 (4-97)||(22130097-22130190)
chr1 (63-159)||(7791559-7791663)
chr1 (31-79)||(21543046-21543094)
chr1 (31-79)||(42095029-42095077)
chr1 (4-58)||(297243-297297)
chr1 (31-79)||(2332148-2332195)
chr1 (119-163)||(18824627-18824671)
chr1 (119-158)||(18271332-18271371)
chr1 (119-158)||(18275986-18276025)
chr1 (115-166)||(18712810-18712861)
chr1 (115-162)||(32651583-32651630)
chr1 (134-171)||(11158123-11158160)
chr1 (4-45)||(13880660-13880701)
chr1 (141-174)||(25091403-25091436)
chr1 (31-79)||(21180368-21180415)
chr1 (106-162)||(21526781-21526837)
chr1 (145-184)||(24960900-24960940)
chr1 (31-79)||(29535992-29536039)
[»] scaffold0151 (1 HSPs)
scaffold0151 (4-158)||(9982-10145)
[»] scaffold0278 (1 HSPs)
scaffold0278 (4-150)||(23729-23883)
[»] scaffold0200 (1 HSPs)
scaffold0200 (7-97)||(18484-18574)
[»] scaffold0058 (1 HSPs)
scaffold0058 (4-97)||(39884-39977)
[»] scaffold0293 (1 HSPs)
scaffold0293 (7-97)||(19371-19461)
[»] scaffold0117 (2 HSPs)
scaffold0117 (7-97)||(42562-42652)
scaffold0117 (31-79)||(21762-21809)
[»] scaffold0051 (1 HSPs)
scaffold0051 (7-97)||(32033-32123)
[»] scaffold1276 (1 HSPs)
scaffold1276 (4-81)||(1027-1104)
[»] scaffold0334 (1 HSPs)
scaffold0334 (4-81)||(2012-2089)
[»] scaffold0309 (1 HSPs)
scaffold0309 (63-166)||(9083-9196)
[»] scaffold0080 (2 HSPs)
scaffold0080 (63-156)||(29928-30029)
scaffold0080 (63-156)||(35393-35494)
[»] scaffold0490 (1 HSPs)
scaffold0490 (63-166)||(5827-5940)
[»] scaffold0180 (1 HSPs)
scaffold0180 (129-189)||(11651-11711)
[»] scaffold0720 (1 HSPs)
scaffold0720 (63-158)||(442-547)
[»] scaffold0070 (1 HSPs)
scaffold0070 (4-81)||(8978-9054)
[»] scaffold0123 (1 HSPs)
scaffold0123 (63-162)||(1264-1373)
[»] scaffold0635 (1 HSPs)
scaffold0635 (31-81)||(7873-7923)
[»] scaffold0599 (1 HSPs)
scaffold0599 (31-81)||(987-1037)
[»] scaffold0077 (2 HSPs)
scaffold0077 (31-81)||(17291-17340)
scaffold0077 (31-81)||(22191-22241)
[»] scaffold0021 (1 HSPs)
scaffold0021 (63-155)||(147568-147670)
[»] scaffold0106 (2 HSPs)
scaffold0106 (31-79)||(39391-39439)
scaffold0106 (144-181)||(29522-29559)
[»] scaffold0076 (2 HSPs)
scaffold0076 (31-79)||(29284-29332)
scaffold0076 (31-79)||(34685-34733)
[»] scaffold0028 (2 HSPs)
scaffold0028 (31-79)||(46118-46166)
scaffold0028 (31-79)||(51522-51570)
[»] scaffold0020 (1 HSPs)
scaffold0020 (114-166)||(101921-101973)
[»] scaffold0011 (1 HSPs)
scaffold0011 (31-79)||(173700-173748)
[»] scaffold0546 (1 HSPs)
scaffold0546 (32-79)||(9931-9978)
[»] scaffold0222 (1 HSPs)
scaffold0222 (115-166)||(16831-16882)
[»] scaffold0109 (1 HSPs)
scaffold0109 (32-79)||(3329-3376)
[»] scaffold0322 (1 HSPs)
scaffold0322 (144-201)||(20228-20286)
[»] scaffold0388 (1 HSPs)
scaffold0388 (33-73)||(15198-15238)
[»] scaffold0107 (2 HSPs)
scaffold0107 (119-163)||(3899-3943)
scaffold0107 (115-159)||(40532-40576)
[»] scaffold0004 (3 HSPs)
scaffold0004 (119-167)||(204342-204390)
scaffold0004 (119-158)||(60435-60474)
scaffold0004 (115-162)||(116907-116954)
[»] scaffold0429 (1 HSPs)
scaffold0429 (119-162)||(1997-2040)
[»] scaffold1783 (1 HSPs)
scaffold1783 (31-73)||(1261-1302)
[»] scaffold0008 (1 HSPs)
scaffold0008 (31-73)||(11505-11546)
[»] scaffold0394 (1 HSPs)
scaffold0394 (4-45)||(12937-12978)
[»] scaffold0083 (1 HSPs)
scaffold0083 (4-45)||(42184-42225)
[»] scaffold0023 (2 HSPs)
scaffold0023 (4-45)||(163221-163262)
scaffold0023 (119-159)||(163346-163386)
[»] scaffold0962 (1 HSPs)
scaffold0962 (119-159)||(616-656)
[»] scaffold0273 (1 HSPs)
scaffold0273 (119-163)||(7687-7731)
[»] scaffold0181 (1 HSPs)
scaffold0181 (119-159)||(25521-25561)
[»] scaffold0071 (1 HSPs)
scaffold0071 (31-79)||(51915-51962)
[»] scaffold0064 (1 HSPs)
scaffold0064 (31-79)||(68902-68949)
[»] scaffold0057 (1 HSPs)
scaffold0057 (145-181)||(1187-1223)
[»] scaffold0042 (1 HSPs)
scaffold0042 (31-79)||(67618-67665)
[»] scaffold0026 (1 HSPs)
scaffold0026 (145-184)||(36585-36625)
[»] scaffold0019 (1 HSPs)
scaffold0019 (115-159)||(135484-135528)
[»] scaffold0014 (1 HSPs)
scaffold0014 (31-87)||(189646-189701)


Alignment Details
Target: chr5 (Bit Score: 122; Significance: 9e-63; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 27868739 - 27868578
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca-----t 98  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |    
T  27868739 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacatgt 27868640  T
Q  99 taaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  27868639 taaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 27868578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 33472728 - 33472564
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||          
T  33472728 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaacaacaacaaca 33472629  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  33472628 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 33472564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 18419339 - 18419433
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacat 98  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18419339 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacat 18419433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 10817758 - 10817871
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| |||||||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  10817758 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcaccct 10817857  T
Q  153 taccttaattcaga 166  Q
    ||||||||||||||    
T  10817858 taccttaattcaga 10817871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 21553525 - 21553475
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  21553525 gtttctacacttttcaattcaaaaatcaatgatcaaaacctaaacccaatt 21553475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 23539711 - 23539817
Alignment:
Q  63 tcaaaacctaatcc-caattatccaacctaagaaca--------ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| | |||||||||||||||||||||        ||||||| ||||||||||| |||||||||||||||||||| |||||| ||||| ||    
T  23539711 tcaaaacctaattctcaattatccaacctaagaacaacaacatgttaaatcacaaattcagaaattatacactatgattactgaatgttagcctcacact 23539810  T
Q  153 tacctta 159  Q
    |||||||    
T  23539811 tacctta 23539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 43242644 - 43242596
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  43242644 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 43242596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 21980203 - 21980153
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    |||||||||||||| ||||||||||| || |||||||||||||||||||||    
T  21980203 gtttctacactttttaattcaaaaataaaaaatcaaaacctaatcccaatt 21980153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 36460960 - 36461009
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  36460960 gtttctacacttttca-ttcaaaagtcaataatcaaaacctaatcccaatt 36461009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 22777110 - 22777063
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  22777110 atacactatgattattgagagttagcctcacccttaccttaattcaga 22777063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 22757952 - 22757903
Alignment:
Q  31 gtttctacacttttcaattcaaaaa-tcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  22757952 gtttctacactttttcattcaaaaaatcaataatcaaaacctaatcccaa 22757903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 8952081 - 8952038
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaatt 162  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||    
T  8952081 atacactatgattattgagagttagcctcacccttaccttaatt 8952038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 18407988 - 18407937
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||| | |||||||| |||| | ||||||||||||||||||||||||||    
T  18407988 aattatatattatgattattgagagatagtctcacccttaccttaattcaga 18407937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 19512397 - 19512448
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||| | |||||||| |||| | ||||||||||||||||||||||||||    
T  19512397 aattatagattatgattattgagagatagtctcacccttaccttaattcaga 19512448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 23111244 - 23111197
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaatt 162  Q
    ||||||| |||||||||| |||| | ||||||||||||||||||||||    
T  23111244 aattatatactatgattattgagagatagtctcacccttaccttaatt 23111197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 28370099 - 28370048
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||| | |||||||| |||| | ||||||||||||||||||||||||||    
T  28370099 aattatagattatgattattgagagatagtctcacccttaccttaattcaga 28370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 41875757 - 41875703
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  41875757 acatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatca 41875703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 22412974 - 22413015
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  22412974 acatcaattcttaacacaattaccatggtttctacacttttc 22413015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 1856614 - 1856567
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||  |||||||||||||||||||||||    
T  1856614 gtttctacactttttcattcaaaac-caataatcaaaacctaatcccaa 1856567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 6766673 - 6766720
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  6766673 gtttctacacttt-caattcaacaatctataatcaaaacctaaacccaa 6766720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 21663183 - 21663143
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||||||||||| |||| ||||| |||||||||||||||    
T  21663183 atacactatgattattgagagttagcctcacccttacctta 21663143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 21674584 - 21674537
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||  |||||||||||||||||||||||    
T  21674584 gtttctacactttttcattcaaaac-caataatcaaaacctaatcccaa 21674537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 22356944 - 22356904
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||||||||||| |||| ||||| |||||||||||||||    
T  22356944 atacactatgattattgagagttagcctcacccttacctta 22356904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 22438792 - 22438748
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttacctta 159  Q
    ||||||||| |||||||| |||| | |||||||||||||||||||    
T  22438792 aattatacattatgattattgagagatagtctcacccttacctta 22438748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 3e-62; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 10833473 - 10833309
Alignment:
Q  1 tggacatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca--- 97  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       
T  10833473 tggacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatgaaaacctaatcccaattatccaacctaagaacaaca 10833374  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  10833373 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 10833309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 42415 - 42579
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  42415 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaaa 42514  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  42515 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 42579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 16324705 - 16324541
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  16324705 acatcaattcttaacacaatttcaatggtttctacactttccaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaata 16324606  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  16324605 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 16324541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 13437126 - 13437290
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  13437126 acatcgattcttaacacaatttcgttggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 13437225  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      |||||||  |||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  13437226 tgttaaatcataaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 13437290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 18893570 - 18893733
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||          
T  18893570 acatcaattcttaacacaattacgat-gtttttacacttttcaattcaaaaatcaataatcaaaacaaaatcccaattatccaacctaagaacaacaaca 18893668  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  18893669 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcacccttacctta 18893733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 17547622 - 17547473
Alignment:
Q  18 cacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacct-aatcccaattatccaacctaagaaca--------ttaaatcgcaa 108  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||        ||||||| |||    
T  17547622 cacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaaatcccaattatctaacctaagaacaacaacatgttaaatcacaa 17547523  T
Q  109 attcagaattatacactatgattactgagtgttagtctcacccttacctt 158  Q
    |||||||||||||||||||||||||||| |||||| |||||||| |||||    
T  17547522 attcagaattatacactatgattactgaatgttagcctcaccctaacctt 17547473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 15465985 - 15466075
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15465985 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 15466075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 43549820 - 43549727
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43549820 acatcaattcttaacacaatttcgatggtttctacacttttcaatttaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 43549727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 5224213 - 5224303
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5224213 tcaattcttaacacaatttcaatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatctaacctaagaaca 5224303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 26054596 - 26054434
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca--------t 98  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||        |    
T  26054596 tcaattcttaacacaatttcgatggtttctacaattttcaattcaaaaatcaataatcaaaacctaatctcaattatccaacctaacaacaacaacatgt 26054497  T
Q  99 taaatcgcaaattcagaattatacac-tatgattactgagtgttagtctcacccttaccttaa 160  Q
    |||||| |||||||||||| |||  | || || || ||| |||||||||||||||||||||||    
T  26054496 taaatcacaaattcagaatcataggcttaagaatattgaatgttagtctcacccttaccttaa 26054434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 29171957 - 29171852
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaaca--------ttaaatcgcaaattcagaattatacactatgattactgagtgttagtctcaccctta 154  Q
    |||||||||||||||||||||||||||||  ||||        ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29171957 tcaaaacctaatcccaattatccaacctagaaacaacaacatgttaaatcacaaattcagaattatacactatgattactgagtgttagtctcaccctta 29171858  T
Q  155 ccttaa 160  Q
    ||||||    
T  29171857 ccttaa 29171852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 17513775 - 17513879
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaaca--------ttaaatcgcaaattcagaattatacactatgattactgagtgttagtctcaccctta 154  Q
    ||||||||||||||||||||| |||||||||||||        |||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17513775 tcaaaacctaatcccaattattcaacctaagaacaacaacacgttaattcacaaattcagaattatacactatgattactgagtgttagtctcaccctta 17513874  T
Q  155 cctta 159  Q
    |||||    
T  17513875 cctta 17513879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 180
Target Start/End: Complemental strand, 34851405 - 34851278
Alignment:
Q  63 tcaaaacctaatcc-caattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| | |||||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  34851405 tcaaaacctaattctcaattatccaacctaagaacaaaaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcaccct 34851306  T
Q  153 taccttaattcagacaaacaactctaca 180  Q
    ||||||||||  ||| |||| |||||||    
T  34851305 taccttaatttcgacgaacagctctaca 34851278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 3803845 - 3803905
Alignment:
Q  141 tagtctcacccttaccttaattcagacaaacaactctacaaaatctctctgcttcttcact 201  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  3803845 tagtctcacccttaccttaattcagacgaacaactctacaaaatctctctagttcttcact 3803905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 11913711 - 11913761
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  11913711 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 11913761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 12270616 - 12270568
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  12270616 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 12270568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 19444576 - 19444624
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  19444576 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 19444624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 19451142 - 19451190
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  19451142 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 19451190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 13837055 - 13837105
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||||||||    
T  13837055 gtttctacactcttcaattcaaaaattaatattcaaaacctaatcccaatt 13837105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 10988945 - 10988901
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatc 75  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  10988945 gtttctacactttttcattcaaaaatcaataatcaaaacctaatc 10988901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 14085521 - 14085569
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  14085521 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 14085569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 14090922 - 14090970
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  14090922 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 14090970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 14647166 - 14647118
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||||    
T  14647166 gtttctacactttttcatccaaaaatcaataatcaaaacctaatcccaa 14647118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 49400521 - 49400569
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  49400521 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 49400569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 10555194 - 10555248
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  10555194 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 10555248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 51602661 - 51602611
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  |||||||| |||||||||||||||||||| |||||    
T  51602661 gtttctacactttttcattcaaaagtcaataatcaaaacctaatctcaatt 51602611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 55291766 - 55291712
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  55291766 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 55291712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 23392860 - 23392820
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  23392860 atacactatgattattgagagttagtctcacccttacctta 23392820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 52337996 - 52337952
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattc 163  Q
    |||||||||||||| |||| ||||| |||||||||||||||||||    
T  52337996 atacactatgattattgagagttagcctcacccttaccttaattc 52337952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 9534338 - 9534389
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||| | |||||||| |||| | ||||||||||||||||||||||||||    
T  9534338 aattatagattatgattattgagagatagtctcacccttaccttaattcaga 9534389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 3803701 - 3803755
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||| |||||||||||||||   || |||||||||||||||||||||| |||||    
T  3803701 acatcgattcttaacacaattgtcatggtttctacacttttcaattcaagaatca 3803755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 46722751 - 46722697
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | || ||||| |||||||||||| ||| |||||    
T  46722751 acatcaattcttaacacaattgccatagtttccacacttttcaatccaagaatca 46722697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 54521650 - 54521704
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  54521650 acatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatca 54521704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 14819091 - 14819136
Alignment:
Q  118 tatacactatgattactgagtgttagtctcacccttaccttaattc 163  Q
    |||||||| |||||| |||| ||||| |||||||||||||||||||    
T  14819091 tatacactttgattattgagagttagcctcacccttaccttaattc 14819136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 18929267 - 18929312
Alignment:
Q  126 atgattactgagtgttagtctcacccttaccttaattcagacaaac 171  Q
    ||||||| |||| | |||||||||||||||||||||||||| ||||    
T  18929267 atgattattgagagatagtctcacccttaccttaattcagaaaaac 18929312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 30123512 - 30123463
Alignment:
Q  31 gtttctacacttttcaattcaaaaat-caataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  |||||||||| ||||||||||||| |||||||||    
T  30123512 gtttctacactttttcattcaaaaattcaataatcaaaacttaatcccaa 30123463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 50243700 - 50243741
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  50243700 acatcaattcttaacacaattaccatggtttctacacttttc 50243741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 3393795 - 3393751
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattc 163  Q
    |||||||||||||| || | ||||| |||||||||||||||||||    
T  3393795 atacactatgattattgggagttagcctcacccttaccttaattc 3393751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 18366555 - 18366515
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||||||||||| |||| ||||| |||||||||||||||    
T  18366555 atacactatgattattgagagttagcctcacccttacctta 18366515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 24122390 - 24122343
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||  |||||||||||||||||||||||    
T  24122390 gtttctacactttttcattcaaaac-caataatcaaaacctaatcccaa 24122343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 24152549 - 24152509
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacactttt 44  Q
    ||||||||||||||||||||| | || ||||||||||||||    
T  24152549 acatcaattcttaacacaattaccatggtttctacactttt 24152509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 52212472 - 52212432
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||||||||||| |||| ||||| |||||||||||||||    
T  52212472 atacactatgattattgagagttagcctcacccttacctta 52212432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 3e-59; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 8413913 - 8413749
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  8413913 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaaa 8413814  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  8413813 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 8413749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 11775601 - 11775765
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||          
T  11775601 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattattcaacctaagaacaacaaca 11775700  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  11775701 tgttaaatcacaaattcagaatttatatactatgattactgaatgttagtctcacccttacctta 11775765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 19882835 - 19882999
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||          
T  19882835 acatcaatttttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataattaaaacctaatcccaattatccaacctaagaacaacaaca 19882934  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| ||||||| |||||||||||| |||||| |||||||||||||||    
T  19882935 tgttaaatcacaaattcagaatttatacaatatgattactgaatgttagcctcacccttacctta 19882999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 14397072 - 14396982
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14397072 tcaattcttaacacaatttcgatggtttctacacttttcaattaaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 14396982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 25483606 - 25483513
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  25483606 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacataatcacaattatccaacctaagaaca 25483513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 18023571 - 18023477
Alignment:
Q  74 tcccaattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcacccttacctta 159  Q
    ||||||||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  18023571 tcccaattatccaacctaagaacaacaaaatgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 18023477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 364779 - 364829
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  364779 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 20387402 - 20387451
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20387402 gtttctacacttttcaattcaaaaatcaataa-caaaacctaatcccaatt 20387451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 20494486 - 20494436
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||||||||    
T  20494486 gtttctacactttttcattcaaaaatcaataattaaaacctaatcccaatt 20494436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 22433751 - 22433701
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  22433751 gtttccacactcttcaattcaaaaattaataatcaaaacctaatcccaatt 22433701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 42559591 - 42559541
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  42559591 gtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaatt 42559541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 3698592 - 3698641
Alignment:
Q  31 gtttctacacttttcaattcaaaa-atcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  3698592 gtttctacactttttcattcaaaaaatcaataatcaaaacctaatcccaa 3698641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 23826130 - 23826175
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcc 76  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||    
T  23826130 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcc 23826175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 32950911 - 32950955
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattc 163  Q
    |||||||||||||| |||| ||||| |||||||||||||||||||    
T  32950911 atacactatgattattgagagttagcctcacccttaccttaattc 32950955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 44432851 - 44432895
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatc 75  Q
    ||||||| ||||||  |||||||||||||||||||||||||||||    
T  44432851 gtttctatactttttcattcaaaaatcaataatcaaaacctaatc 44432895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 23482097 - 23482050
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaatt 162  Q
    ||||||| |||||||||| |||| | ||||||||||||||||||||||    
T  23482097 aattatatactatgattattgagagatagtctcacccttaccttaatt 23482050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 15635232 - 15635191
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  15635232 gtttctacacttt-caattcaaaaatctataatcaaaacctaa 15635191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 21325902 - 21325861
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  21325902 gtttctacacttttca-ttcaaaaatcaatattcaaaacctaa 21325861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 17460372 - 17460331
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  17460372 acatcaattcttaacacaattaccatggtttctacacttttc 17460331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 20455874 - 20455915
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  20455874 acatcaattcttaacacaattaccatggtttctacacttttc 20455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 20463082 - 20463123
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  20463082 acatcaattcttaacacaattaccatggtttctacacttttc 20463123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 23661184 - 23661225
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  23661184 acatcaattcttaacacaattaccatggtttctacacttttc 23661225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 38184726 - 38184689
Alignment:
Q  129 attactgagtgttagtctcacccttaccttaattcaga 166  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  38184726 attattgagagttagtctcacccttaccttaattcaga 38184689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 22920012 - 22919964
Alignment:
Q  118 tatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||||||||||| |||| ||||| ||||||||||| |||| |||||    
T  22920012 tatacactatgattattgagagttagcctcacccttactttaaatcaga 22919964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 3e-59; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 23226022 - 23225858
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  23226022 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaaa 23225923  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  23225922 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 23225858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 13765234 - 13765398
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          
T  13765234 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaactatccaacctaagaacaacaaca 13765333  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  13765334 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcactcttacctta 13765398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 31021886 - 31021721
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattca-aaaatcaataatcaaaacctaatcccaattatccaacctaagaaca----- 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||         
T  31021886 acatcaattcttaacacaatttcgatagtttctacacttttcaattcaaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaac 31021787  T
Q  98 ---ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
       ||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  31021786 atgttaaatcacaaattcagaatttatacaatatgattactgaatgttagtctcacccttacctta 31021721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 23956750 - 23956898
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  23956750 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaaa 23956849  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttag 143  Q
      ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  23956850 tgttaaatcacaaattcagaatttatacactatgattactgaatgttag 23956898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 23415795 - 23415885
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23415795 tcaattcttaacacaatttcgatggtttctacgcttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 23415885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 27557553 - 27557643
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    |||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27557553 tcaattattaacacaatttcgttggtttctacacttttcaattcaaaaatcaataatcaaaacataatcccaattatccaacctaagaaca 27557643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 1268 - 1446
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacat--------taaatcgcaaattcagaattatac 122  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||||| || ||  |||  |||         ||||||  ||| ||||||||||||    
T  1268 gtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaattctcaaatttaaccacaaccccttgctaaatc--aaaatcagaattatac 1365  T
Q  123 a--ctatgattactgagtgttagtctcacccttaccttaattcagacaaacaactctacaaaatctctctgcttcttcact 201  Q
    |  |||| || | |||| ||||  ||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  1366 aaactataatcattgagagttaacctcacccttaccttaattcagacgaacaactctacaaaatctctccggttcttcact 1446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 8227 - 8405
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacat--------taaatcgcaaattcagaattatac 122  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||||| || ||  |||  |||         ||||||  ||| ||||||||||||    
T  8227 gtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaattctcaaatttaaccacaaccccttgctaaatc--aaaatcagaattatac 8324  T
Q  123 a--ctatgattactgagtgttagtctcacccttaccttaattcagacaaacaactctacaaaatctctctgcttcttcact 201  Q
    |  |||| || | |||| ||||  ||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  8325 aaactataatcattgagagttaacctcacccttaccttaattcagacgaacaactctacaaaatctctccggttcttcact 8405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 8759580 - 8759532
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  8759580 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 8759532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 8767327 - 8767279
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  8767327 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 8767279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 1254747 - 1254797
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  1254747 gtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaatt 1254797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 1588658 - 1588700
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  1588658 gtttctacacttttcaattcaaaaatctataatcaaaacctaa 1588700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 34296329 - 34296279
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||||||    
T  34296329 gtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaatt 34296279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 22347521 - 22347578
Alignment:
Q  145 ctcacccttaccttaattcagacaaac-aactctacaaaatctctctgcttcttcact 201  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| | |||||||||    
T  22347521 ctcacccttaccttaattcagacgaacaaactctacaaaatctctccggttcttcact 22347578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 14593765 - 14593717
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  14593765 gtttctacactttttcattcaaaaatcaataatcaaaacttaatcccaa 14593717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 18659444 - 18659488
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattc 163  Q
    |||||||||||||| |||| |||||||||||||||||||||||||    
T  18659444 atacactatgattattgagagttagtctcacccttaccttaattc 18659488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 21470807 - 21470850
Alignment:
Q  141 tagtctcacccttaccttaattcagacaaacaactctacaaaat 184  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  21470807 tagtctcaccattaccttaattcagacgaacaactctacaaaat 21470850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 21477307 - 21477350
Alignment:
Q  141 tagtctcacccttaccttaattcagacaaacaactctacaaaat 184  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||    
T  21477307 tagtctcacccttaccttaattcagacgaacaattctacaaaat 21477350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 12943017 - 12943071
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||| ||| |||||    
T  12943017 acatcgattcttaacacaattgccatcgtttctacacttttcaatccaagaatca 12943071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 17026415 - 17026357
Alignment:
Q  144 tctcacccttaccttaattcagacaaac-aactctacaaaatctctctgcttcttcact 201  Q
    |||||||||||||||||||||||| ||| ||||| ||||| |||||||| |||||||||    
T  17026415 tctcacccttaccttaattcagacgaacaaactcaacaaactctctctggttcttcact 17026357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 24441669 - 24441710
Alignment:
Q  121 acactatgattactgagtgttagtctcacccttaccttaatt 162  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  24441669 acactatgattattgagagttagtctcacccttaccttaatt 24441710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 7430512 - 7430556
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatc 75  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||    
T  7430512 gtttctacactttttcattcaaaaatcaataatcaaaacttaatc 7430556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 15816798 - 15816757
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  15816798 gtttctacacttt-caattcaaaaatctataatcaaaacctaa 15816757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 4477868 - 4477917
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattca 164  Q
    ||||||| | |||||||| |||| | ||||||||||||||||||||||||    
T  4477868 aattatagattatgattattgagagatagtctcacccttaccttaattca 4477917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 14978706 - 14978665
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  14978706 acatcaattcttaacacaattaccatggtttctacacttttc 14978665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 20556197 - 20556156
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  20556197 acatcaattcttaacacaattaccatggtttctacacttttc 20556156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 25469754 - 25469705
Alignment:
Q  110 ttcagaattatacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||||||||| | |||||||| |||| | |||||||||||||||||||    
T  25469754 ttcagaattatagattatgattattgagagatagtctcacccttacctta 25469705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 13750319 - 13750275
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattc 163  Q
    |||||||||||||| |||| ||||| |||| ||||||||||||||    
T  13750319 atacactatgattattgagagttagcctcagccttaccttaattc 13750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 29266381 - 29266421
Alignment:
Q  145 ctcacccttaccttaattcagacaaac-aactctacaaaat 184  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  29266381 ctcacccttaccttaattcagacgaacaaactctacaaaat 29266421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 166
Target Start/End: Original strand, 45005832 - 45006000
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca-----t 98  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |    
T  45005832 acatcaattcttaacacaatttcaatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacatgt 45005931  T
Q  99 taaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||  |||||||||| |||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  45005932 taaatcataaattcagaatttatacactatgattactgaatgttagcatcacccttaccttaattcaga 45006000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 28386131 - 28386295
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||          
T  28386131 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacataatcccaattatccaacctaagaacaacaaca 28386230  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  28386231 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 28386295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 18230628 - 18230705
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18230628 acatcaattcttaacacaatttcgatgatttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 18230705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 17143260 - 17143331
Alignment:
Q  129 attactgagtgttagtctcacccttaccttaattcagacaaacaactctacaaaatctctctgcttcttcact 201  Q
    |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||    
T  17143260 attattgagagttagtctcacccttaccttaattcagacgaacaactctacaaaatctctttg-ttcttcact 17143331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 63 - 180
Target Start/End: Original strand, 13447475 - 13447602
Alignment:
Q  63 tcaaaacctaatccc-aattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| || ||||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||||||| |||||| ||||| ||    
T  13447475 tcaaaacctaattcctaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcactct 13447574  T
Q  153 taccttaattcagacaaacaactctaca 180  Q
    ||||||||||  ||| |||| |||||||    
T  13447575 taccttaatttcgacgaacagctctaca 13447602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 15712757 - 15712695
Alignment:
Q  98 ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcacccttacctta 159  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  15712757 ttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctta 15712695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 180
Target Start/End: Complemental strand, 2584251 - 2584124
Alignment:
Q  63 tcaaaacctaatcc-caattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| | |||||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||      
T  2584251 tcaaaacctaattctcaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcacctc 2584152  T
Q  153 taccttaattcagacaaacaactctaca 180  Q
    ||||||||||  ||| |||| |||||||    
T  2584151 taccttaatttcgacgaacagctctaca 2584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 56114898 - 56114848
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  56114898 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 56114848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 4830264 - 4830158
Alignment:
Q  63 tcaaaacctaatcc-caattatccaacctaagaaca--------ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| | |||||||||||||||||||||        ||||||| ||||||||||| |||||||||||||||||||| |||||| ||||| ||    
T  4830264 tcaaaacctaattctcaattatccaacctaagaacaacaacatgttaaatcacaaattcagaaattatacactatgattactgaatgttagcctcacact 4830165  T
Q  153 tacctta 159  Q
    |||||||    
T  4830164 tacctta 4830158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 4833559 - 4833453
Alignment:
Q  63 tcaaaacctaatcc-caattatccaacctaagaaca--------ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| | |||||||||||||||||||||        ||||||| ||||||||||| |||||||||||||||||||| |||||| ||||| ||    
T  4833559 tcaaaacctaattctcaattatccaacctaagaacaacaacatgttaaatcacaaattcagaaattatacactatgattactgaatgttagcctcacact 4833460  T
Q  153 tacctta 159  Q
    |||||||    
T  4833459 tacctta 4833453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 24046616 - 24046566
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  24046616 gtttctacactttttcattcaaaaatcaataatcaaaacctaatctcaatt 24046566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 16277452 - 16277398
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  16277452 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 16277398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 36038698 - 36038752
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||| ||| |||||    
T  36038698 acatcgattcttaacacaattgccatcgtttctacacttttcaatccaagaatca 36038752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 53387062 - 53387008
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  53387062 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 53387008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 11201540 - 11201492
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  || |||||||||||||||||||| |||||||||    
T  11201540 gtttctacactttttcatccaaaaatcaataatcaaaacttaatcccaa 11201492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 11208271 - 11208223
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  || |||||||||||||||||||| |||||||||    
T  11208271 gtttctacactttttcatccaaaaatcaataatcaaaacttaatcccaa 11208223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 15416013 - 15415974
Alignment:
Q  33 ttctacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  15416013 ttctacacttttcaattcaaaaatc-ataatcaaaacctaa 15415974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 6512632 - 6512679
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||||||| || |||| ||||| ||||||||||||||||||||||    
T  6512632 atacactatgactattgagagttagcctcacccttaccttaattcaga 6512679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 10705741 - 10705784
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaatt 162  Q
    |||||||||||||| |||| |||||||| |||||||||||||||    
T  10705741 atacactatgattattgagagttagtcttacccttaccttaatt 10705784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 10919511 - 10919554
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaatt 162  Q
    |||||||||||||| |||| |||||||| |||||||||||||||    
T  10919511 atacactatgattattgagagttagtcttacccttaccttaatt 10919554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 3338381 - 3338427
Alignment:
Q  125 tatgattactgagtgttagtctcacccttaccttaattcagacaaac 171  Q
    |||||||| |||| ||||| ||||||||||||||||||| |||||||    
T  3338381 tatgattattgagagttagcctcacccttaccttaattctgacaaac 3338427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 16370856 - 16370815
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  16370856 gtttctacactcttcaattcaaaaatc-ataatcaaaacctaa 16370815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 33849630 - 33849684
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||| |||||||||||||||   || |||||||||||||||||||||| |||||    
T  33849630 acatcgattcttaacacaattgtcatggtttctacacttttcaattcaagaatca 33849684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 13043934 - 13043893
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  13043934 acatcaattcttaacacaattactatggtttctacacttttc 13043893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 23802569 - 23802528
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  23802569 acatcaattcttaacacaattaccatggtttctacacttttc 23802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 8711543 - 8711587
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattc 163  Q
    |||||||||||||| |||| |||||  ||||||||||||||||||    
T  8711543 atacactatgattattgagagttagcttcacccttaccttaattc 8711587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 14049519 - 14049566
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  14049519 gtttctacacttt-caattcaacaatctataatcaaaacctaaacccaa 14049566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 14931163 - 14931123
Alignment:
Q  123 actatgattactgagtgttagtctcacccttaccttaattc 163  Q
    |||||||||| |||| ||||| |||||||||||||||||||    
T  14931163 actatgattattgagagttagcctcacccttaccttaattc 14931123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 15408150 - 15408194
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttacctta 159  Q
    ||||||| |||||||||| |||| | |||||||||||||||||||    
T  15408150 aattatatactatgattattgagagatagtctcacccttacctta 15408194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 16370776 - 16370724
Alignment:
Q  106 caaattcagaattatacactatgattactgagtgttagtctcacccttacctt 158  Q
    |||| |||||| |||||||||| || | |||| ||||||||||||||||||||    
T  16370776 caaaatcagaagtatacactattatcattgagagttagtctcacccttacctt 16370724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 30147856 - 30147903
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  30147856 gtttctacacttt-caattcaacaatctataatcaaaacctaaacccaa 30147903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 49547108 - 49547064
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaat 48  Q
    ||||| ||||||||||||||| | || ||||||||||||||||||    
T  49547108 acatcgattcttaacacaattgccatggtttctacacttttcaat 49547064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 3e-56; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 16108023 - 16107860
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  16108023 acatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 16107924  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctt 158  Q
      ||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  16107923 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctt 16107860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 11661993 - 11662157
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||          
T  11661993 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacataatcccaattatccaacctaagaacaacaaca 11662092  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||    
T  11662093 tgttaaatcacaaattcagaatttatacactataattactgaatgttagcctcacccttacctta 11662157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 14188458 - 14188294
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||          
T  14188458 acatcaattcttaacacaatttcgatggtttctacacatttcaattcaaaaatcaataatcaaaagctaatcccaattatccaacctaagaacaacaaca 14188359  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      |||||||  |||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  14188358 tgttaaatcaaaaattcagaatttatacactatgattactgaatgttagcctcacccttacctta 14188294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 42374468 - 42374375
Alignment:
Q  5 catcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacat 98  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42374468 catcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacat 42374375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 1856562 - 1856472
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1856562 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 1856472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 13917734 - 13917644
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13917734 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 13917644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 25926461 - 25926371
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25926461 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 25926371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 13648169 - 13648262
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13648169 acatcaattcttaacacaattttgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatctcaattatccaacctaagaaca 13648262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 13256580 - 13256657
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13256580 acatcaattcttaacacaatttcgatgatttctacacttttcaattcaaaaataaataatcaaaacctaatcccaatt 13256657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 29005016 - 29005120
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaaca--------ttaaatcgcaaattcagaattatacactatgattactgagtgttagtctcaccctta 154  Q
    ||||||||||||||||||||| |||||||||||||        |||| || |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  29005016 tcaaaacctaatcccaattattcaacctaagaacaacaacacgttaattcacaaatttagaattatatactatgattactgagtgttagtctcaccctta 29005115  T
Q  155 cctta 159  Q
    |||||    
T  29005116 cctta 29005120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 3288865 - 3288756
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| |||||||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  3288865 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcaccct 3288766  T
Q  153 taccttaatt 162  Q
    ||||||||||    
T  3288765 taccttaatt 3288756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 21733920 - 21733837
Alignment:
Q  98 ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcacccttaccttaattcagacaaacaactctaca 180  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||  ||| ||||||||||||    
T  21733920 ttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcacccttaccttaatttcgacgaacaactctaca 21733837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 21734479 - 21734396
Alignment:
Q  98 ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcacccttaccttaattcagacaaacaactctaca 180  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||  ||| ||||||||||||    
T  21734479 ttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcacccttaccttaatttcgacgaacaactctaca 21734396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 14190990 - 14190892
Alignment:
Q  70 ctaatcccaattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcacccttacctta 159  Q
    ||||||||||||||||||||||||||||        |||||||  |||||||||||| |||||||||||||||||| |||||| |||||||||||||||    
T  14190990 ctaatcccaattatccaacctaagaacaacaacatgttaaatcaaaaattcagaatttatacactatgattactgaatgttagcctcacccttacctta 14190892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 38829050 - 38829098
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  38829050 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 38829098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 15727503 - 15727461
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  15727503 gtttctacacttttcaattcaaaaatctataatcaaaacctaa 15727461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 19617285 - 19617333
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  19617285 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 19617333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 40554558 - 40554506
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattcagacaaac 171  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||| |||||||    
T  40554558 atacactatgattattgagagttagcctcacccttaccttaattctgacaaac 40554506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 15214468 - 15214518
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||| ||||  |||||||| ||||||||||||||||||||||||||    
T  15214468 gtttctacattttttcattcaaaagtcaataatcaaaacctaatcccaatt 15214518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 17505129 - 17505075
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  17505129 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 17505075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 17548085 - 17548139
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  17548085 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 17548139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 27565818 - 27565866
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  || |||||||||||||||||||| |||||||||    
T  27565818 gtttctacactttttcatacaaaaatcaataatcaaaacataatcccaa 27565866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 11311069 - 11311120
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    |||| |||||||| |||| |||| | ||||||||||||||||||||||||||    
T  11311069 aattctacactattattattgagagatagtctcacccttaccttaattcaga 11311120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 11304075 - 11304129
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  11304075 acatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatca 11304129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 11382915 - 11382865
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcag 165  Q
    ||||||| | |||||||| |||| | |||||||||||||||||||||||||    
T  11382915 aattatatattatgattattgagagatagtctcacccttaccttaattcag 11382865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 11389392 - 11389342
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcag 165  Q
    ||||||| | |||||||| |||| | |||||||||||||||||||||||||    
T  11389392 aattatatattatgattattgagagatagtctcacccttaccttaattcag 11389342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 14105592 - 14105538
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | || ||||| |||||||||||| ||| |||||    
T  14105592 acatcaattcttaacacaattgccatggtttccacacttttcaatccaagaatca 14105538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 14415609 - 14415555
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | || ||||| |||||||||||| ||| |||||    
T  14415609 acatcaattcttaacacaattgccatggtttccacacttttcaatccaagaatca 14415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 16009587 - 16009636
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattca 164  Q
    ||||||| | |||||||| |||| | ||||||||||||||||||||||||    
T  16009587 aattatagattatgattattgagagatagtctcacccttaccttaattca 16009636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 16462956 - 16462997
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | ||||||||||||| ||||    
T  16462956 acatcaattcttaacacaattgccatcgtttctacacatttc 16462997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 18455753 - 18455712
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  18455753 acatcaattcttaacacaattaccatggtttctacacttttc 18455712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 14153012 - 14152965
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  14153012 gtttctacacttt-caattcaacaatctataatcaaaacctaaacccaa 14152965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 21231004 - 21230960
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttacctta 159  Q
    ||||||| |||||||||| |||| | |||||||||||||||||||    
T  21231004 aattatatactatgattattgagagatagtctcacccttacctta 21230960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 185
Target Start/End: Complemental strand, 41781061 - 41781021
Alignment:
Q  146 tcacccttaccttaattcagacaaacaa-ctctacaaaatc 185  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  41781061 tcacccttaccttaattcagacgaacaagctctacaaaatc 41781021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 41301094 - 41300930
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||          
T  41301094 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcacaattatccaacctaagaacaacaaca 41300995  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  41300994 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcacccttacctta 41300930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 21072853 - 21072689
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||          
T  21072853 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaatctaatcccaattatccaacctaagaacaacaaca 21072754  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  21072753 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcacccttacctta 21072689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 6477387 - 6477238
Alignment:
Q  18 cacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacct-aatcccaattatccaacctaagaaca--------ttaaatcgcaa 108  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||        ||||||| |||    
T  6477387 cacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaaattccaattatccaacctaagaacaacaacatgttaaatcacaa 6477288  T
Q  109 attcagaattatacactatgattactgagtgttagtctcacccttacctt 158  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  6477287 attcagaattatacactatgattactgaatgttagcctcacccttacctt 6477238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 31346010 - 31346100
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31346010 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatacaacctaagaaca 31346100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 22703923 - 22704036
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| |||||||||||||||||||||||        ||||||| |||||| |||||| |||||||||||||||| | |||||| ||||||||    
T  22703923 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaatttagaatttatacactatgattactaaatgttagcctcaccct 22704022  T
Q  153 taccttaattcaga 166  Q
    ||||||||||||||    
T  22704023 taccttaattcaga 22704036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 10039197 - 10039147
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  10039197 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 10039147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 21132716 - 21132671
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcc 76  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||    
T  21132716 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcc 21132671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 201611 - 201659
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  201611 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 201659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 6743433 - 6743385
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  6743433 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 6743385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 23265153 - 23265204
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||| |||||||||| |||| | ||||||||||||||||||||||||||    
T  23265153 aattatatactatgattattgagagatagtctcacccttaccttaattcaga 23265204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 23280221 - 23280272
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||| |||||||||| |||| | ||||||||||||||||||||||||||    
T  23280221 aattatatactatgattattgagagatagtctcacccttaccttaattcaga 23280272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 20590447 - 20590393
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  20590447 acatcaattcttaacacaattgccatggtttctacacttttcaatccaataatca 20590393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 23338564 - 23338510
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | || |||||||||||||||||||||| |||||    
T  23338564 acatcgattcttaacacaattgccatggtttctacacttttcaattcaagaatca 23338510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 13100899 - 13100845
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | || |||||||||||||||||| ||| |||||    
T  13100899 acatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatca 13100845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 22173142 - 22173101
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  22173142 acatcaattcttaacacaattaccatggtttctacacttttc 22173101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 43707212 - 43707171
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  43707212 acatcaattcttaacacaattgccatggtttctacacttttc 43707171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 21908381 - 21908421
Alignment:
Q  126 atgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||| |||| | ||||||||||||||||||||||||||    
T  21908381 atgattattgagagatagtctcacccttaccttaattcaga 21908421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 43694391 - 43694438
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||  |||||||||||||||||||||||    
T  43694391 gtttctacactttttcattcaaaac-caataatcaaaacctaatcccaa 43694438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 7175 - 7014
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca-----t 98  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||     |    
T  7175 acatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacccaaaaacaacatgt 7076  T
Q  99 taaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  7075 taaatcacaaattcagaatttatacactatgcttactgaatgttagtctcacccttacctta 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 3851 - 4012
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca-----t 98  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||     |    
T  3851 acatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataaccaaaacctaatcccaattatccaacccaagaacaacatgt 3950  T
Q  99 taaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  3951 taaatcacaaattcagaatttatacactatgattattgaatgttagtctcacccttacctta 4012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 176683 - 176844
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca--------t 98  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||        |    
T  176683 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatcgaacctaagaacaacaacatgt 176782  T
Q  99 taaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  176783 taaatcacaaattcaaaatttatacactatgattactgaatgttagtctcacccttacctta 176844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 169330 - 169406
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattat 83  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  169330 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattat 169406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 28313236 - 28313400
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  28313236 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 28313335  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctta 159  Q
      ||||||| ||||||||||| |||||| ||||||||||||| ||||||  ||||||||||||||    
T  28313336 tgttaaatcacaaattcagaatttatacgctatgattactgaatgttagcttcacccttacctta 28313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 18 - 158
Target Start/End: Complemental strand, 13527865 - 13527716
Alignment:
Q  18 cacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacct-aatcccaattatccaacctaagaaca--------ttaaatcgcaa 108  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||        ||||||| |||    
T  13527865 cacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacataaatcccaattatccaacctaagaacaacaatatgttaaatcacaa 13527766  T
Q  109 attcagaattatacactatgattactgagtgttagtctcacccttacctt 158  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||||    
T  13527765 attcagaattatacactatgattactgaatgttagcctcatccttacctt 13527716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 45574184 - 45574091
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45574184 acatcaattcttaacacaatttcgatggtttctgcacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 45574091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 22130190 - 22130097
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  22130190 acatcaattcttaacacaattttgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcacaattatcaaacctaagaaca 22130097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 7791663 - 7791559
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaaca--------ttaaatcgcaaattcagaattatacactatgattactgagtgttagtctcaccctta 154  Q
    |||||||||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7791663 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaattatacactatgattactgagtgttagtctcaccctta 7791564  T
Q  155 cctta 159  Q
    |||||    
T  7791563 cctta 7791559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 21543046 - 21543094
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  21543046 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 21543094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 42095077 - 42095029
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  42095077 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 42095029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 297243 - 297297
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | || |||||||||||||||||||||| |||||    
T  297243 acatcgattcttaacacaattgccatggtttctacacttttcaattcaagaatca 297297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 2332195 - 2332148
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  2332195 gtttctacactttttcattcaaaa-tcaataatcaaaacctaatcccaa 2332148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 18824627 - 18824671
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattc 163  Q
    |||||||||||||| |||| ||||| |||||||||||||||||||    
T  18824627 atacactatgattattgagagttagcctcacccttaccttaattc 18824671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 18271332 - 18271371
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctt 158  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  18271332 atacactatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 18275986 - 18276025
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctt 158  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  18275986 atacactatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 18712810 - 18712861
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||| |||||||||| |||| | ||||||||||| ||||||||||||||    
T  18712810 aattatatactatgattattgagagatagtctcacccataccttaattcaga 18712861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 32651583 - 32651630
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaatt 162  Q
    ||||||| |||||||||| |||| | ||||||||||||||||||||||    
T  32651583 aattatatactatgattattgagagatagtctcacccttaccttaatt 32651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 11158123 - 11158160
Alignment:
Q  134 tgagtgttagtctcacccttaccttaattcagacaaac 171  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  11158123 tgagagttagtctcacccttaccttaattcagaaaaac 11158160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 13880701 - 13880660
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  13880701 acatcaattcttaacacaattaccatggtttctacacttttc 13880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 25091436 - 25091403
Alignment:
Q  141 tagtctcacccttaccttaattcagacaaacaac 174  Q
    ||||||||||||||||||||||||||| ||||||    
T  25091436 tagtctcacccttaccttaattcagacgaacaac 25091403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 21180415 - 21180368
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  21180415 gtttctacacttt-caattcaacaatctataatcaaaacctaaacccaa 21180368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 21526837 - 21526781
Alignment:
Q  106 caaattcagaattatacactatgattactgagtgttagtctcacccttaccttaatt 162  Q
    |||| |||||| |||||||||| || | |||| |||| |||||||||||||||||||    
T  21526837 caaaatcagaagtatacactatcatcattgagagttattctcacccttaccttaatt 21526781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 24960900 - 24960940
Alignment:
Q  145 ctcacccttaccttaattcagacaaac-aactctacaaaat 184  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  24960900 ctcacccttaccttaattcagacgaacaaactctacaaaat 24960940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 29535992 - 29536039
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  29535992 gtttctacacttt-caattcaacaatctataatcaaaacctaaacccaa 29536039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 9982 - 10145
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||          
T  9982 acatcaattcttaacacaatttcgatggtttctacacttttcaactcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaccaacaaca 10081  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacccttacctt 158  Q
      ||||||| ||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||    
T  10082 tgttaaatcacaaattcagaatttatacactataattactgaatgttagcctcacccttacctt 10145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 150
Target Start/End: Complemental strand, 23883 - 23729
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca------ 97  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  23883 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 23784  T
Q  98 --ttaaatcgcaaattcagaa-ttatacactatgattactgagtgttagtctcacc 150  Q
      ||||||| | ||||||||| |||||||||||||||||||| |||||| ||||||    
T  23783 tgttaaatcac-aattcagaatttatacactatgattactgaatgttagcctcacc 23729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 18484 - 18574
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18484 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 18574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 39977 - 39884
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39977 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatctaacctaagaaca 39884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 19461 - 19371
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19461 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacttaatcccaattatccaacctaagaaca 19371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 42562 - 42652
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42562 tcaattcttaacactatttcaatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 42652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 21762 - 21809
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  21762 gtttctacacttt-caattcaacaatctataatcaaaacctaaacccaa 21809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 32033 - 32123
Alignment:
Q  7 tcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaaca 97  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  32033 tcaactcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaataacaattatccaacctaagaaca 32123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 1027 - 1104
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1027 acatcaactcttaacacaatttctatggtttctacacttttcaattcaaaaatcaaaaatcaaaacctaatcccaatt 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 2012 - 2089
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    |||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2012 acatcaattcttaacacaattagcatagtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 2089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 9083 - 9196
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| |||||||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  9083 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcaccct 9182  T
Q  153 taccttaattcaga 166  Q
    ||||||||||||||    
T  9183 taccttaattcaga 9196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 57; Significance: 5e-24; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 29928 - 30029
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaaca--------ttaaatcgcaaattcagaattatacactatgattactgagtgttagtctcaccctta 154  Q
    |||||||||||||||||||||||||||||||||||        ||||| | |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  29928 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaaccacaaattcagaattatacactataactactgagtgttagtctcaccctta 30027  T
Q  155 cc 156  Q
    ||    
T  30028 cc 30029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 35393 - 35494
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaaca--------ttaaatcgcaaattcagaattatacactatgattactgagtgttagtctcaccctta 154  Q
    |||||||||||||||||||||||||||||||||||        ||||| | |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  35393 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaaccacaaattcagaattatacactataactactgagtgttagtctcaccctta 35492  T
Q  155 cc 156  Q
    ||    
T  35493 cc 35494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 5827 - 5940
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| |||||||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||| ||| |||||| ||||||||    
T  5827 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattattgaatgttagcctcaccct 5926  T
Q  153 taccttaattcaga 166  Q
    ||||||||||||||    
T  5927 taccttaattcaga 5940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 11651 - 11711
Alignment:
Q  129 attactgagtgttagtctcacccttaccttaattcagacaaacaactctacaaaatctctc 189  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651 attattgagagttagtctcacccttaccttaattcagacaaacaactctacaaaatctctc 11711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 158
Target Start/End: Complemental strand, 547 - 442
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| |||||||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  547 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcaccct 448  T
Q  153 tacctt 158  Q
    ||||||    
T  447 tacctt 442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 8978 - 9054
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||||||||| | || ||||||||||||||| | || ||||| ||||||||||||||||||||||||    
T  8978 acatcaattcttaacacaattgccatggtttctacacttttctaatc-aaaattaataatcaaaacctaatcccaatt 9054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 1373 - 1264
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| |||||||||||||||||||||||        |||||||  |||||||||||| |||||||||||||||| | |||||| ||||||||    
T  1373 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcataaattcagaatttatacactatgattactaaatgttagcctcaccct 1274  T
Q  153 taccttaatt 162  Q
    ||||||||||    
T  1273 taccttaatt 1264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 7873 - 7923
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  7873 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 7923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 987 - 1037
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  987 gtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 1037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 17340 - 17291
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17340 gtttctacacttttca-ttcaaaaatcaataatcaaaacctaatcccaatt 17291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 22241 - 22191
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  22241 gtttctacactttttcattcaaaaatcaataatcaaaacctaatctcaatt 22191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 147568 - 147670
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaaca--------ttaaatcgcaaattcagaatt-atacactatgattactgagtgttagtctcaccct 152  Q
    |||||||||||| |||||||||||||||||||||||        ||||||| |||||| |||||| |||||||||||||||||| |||||| ||||||||    
T  147568 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaatttagaatttatacactatgattactgaatgttagcctcaccct 147667  T
Q  153 tac 155  Q
    |||    
T  147668 tac 147670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 39391 - 39439
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  39391 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 39439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 29522 - 29559
Alignment:
Q  144 tctcacccttaccttaattcagacaaacaactctacaa 181  Q
    |||||||||||||||||||||||  |||||||||||||    
T  29522 tctcacccttaccttaattcagatgaacaactctacaa 29559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 29332 - 29284
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  29332 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 29284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 34733 - 34685
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  34733 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 34685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 46166 - 46118
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  46166 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 46118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 51570 - 51522
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  51570 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 51522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 101973 - 101921
Alignment:
Q  114 gaattatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    |||||||| |||||||||| |||| | ||||||||||||||||||||||||||    
T  101973 gaattatatactatgattattgagagatagtctcacccttaccttaattcaga 101921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 173748 - 173700
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  173748 gtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 173700  T

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Target: scaffold0546 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 9978 - 9931
Alignment:
Q  32 tttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||    
T  9978 tttctacactttttcattcaaaaatcaataatcaaaacctaattccaa 9931  T

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Target: scaffold0222 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 16831 - 16882
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaattcaga 166  Q
    ||||||| |||||||||| |||| | ||||||||||||||||||||||||||    
T  16831 aattatatactatgattattgagagatagtctcacccttaccttaattcaga 16882  T

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Target: scaffold0109 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 3329 - 3376
Alignment:
Q  32 tttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||    
T  3329 tttctacactttttcattcaaaaatcaataatcaaaacctaattccaa 3376  T

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Target: scaffold0322 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 20228 - 20286
Alignment:
Q  144 tctcacccttaccttaattcagacaaac-aactctacaaaatctctctgcttcttcact 201  Q
    |||||||||||||||||||||||| ||| ||||| ||||| |||||||| |||||||||    
T  20228 tctcacccttaccttaattcagacgaacaaactcaacaaactctctctggttcttcact 20286  T

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Target: scaffold0388 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 15238 - 15198
Alignment:
Q  33 ttctacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  15238 ttctacacttttcaattcaaaaatcaacaattaaaacctaa 15198  T

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Target: scaffold0107 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 3899 - 3943
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattc 163  Q
    |||||||||||||| |||| ||||| |||||||||||||||||||    
T  3899 atacactatgattattgagagttagcctcacccttaccttaattc 3943  T

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Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 40576 - 40532
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttacctta 159  Q
    ||||||| |||||||||| |||| | |||||||||||||||||||    
T  40576 aattatatactatgattattgagagatagtctcacccttacctta 40532  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 204390 - 204342
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattcagac 167  Q
    |||||||||||||| || | ||||| |||||||||||||||||||||||    
T  204390 atacactatgattattgggagttagcctcacccttaccttaattcagac 204342  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 60435 - 60474
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctt 158  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  60435 atacactatgattattgagagttagtctcacccttacctt 60474  T

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Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 116907 - 116954
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttaccttaatt 162  Q
    ||||||| |||||||||| |||| | ||||||||||||||||||||||    
T  116907 aattatatactatgattattgagagatagtctcacccttaccttaatt 116954  T

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Target: scaffold0429 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 2040 - 1997
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaatt 162  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||    
T  2040 atacactatgattattgagagttagcctcacccttaccttaatt 1997  T

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Target: scaffold1783 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 1261 - 1302
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  1261 gtttctacacttt-caattcaaaaatctataatcaaaacctaa 1302  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 11546 - 11505
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  11546 gtttctacacttt-caattcaaaaatctataatcaaaacctaa 11505  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 12937 - 12978
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  12937 acatcaattcttaacacaattaccatggtttctacacttttc 12978  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 42184 - 42225
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  42184 acatcaattcttaacacaattaccatggtttctacacttttc 42225  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 163221 - 163262
Alignment:
Q  4 acatcaattcttaacacaatttcgatcgtttctacacttttc 45  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  163221 acatcaattcttaacacaattaccatggtttctacacttttc 163262  T

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Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 163346 - 163386
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||||||||||| |||| ||||| |||||||||||||||    
T  163346 atacactatgattattgagagttagcctcacccttacctta 163386  T

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Target: scaffold0962 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 656 - 616
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||||||||||| |||| ||||| |||||||||||||||    
T  656 atacactatgattattgagagttagcctcacccttacctta 616  T

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Target: scaffold0273 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 7687 - 7731
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttaccttaattc 163  Q
    ||||| |||||||| |||| ||||| |||||||||||||||||||    
T  7687 atacaatatgattattgagagttagcctcacccttaccttaattc 7731  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 25561 - 25521
Alignment:
Q  119 atacactatgattactgagtgttagtctcacccttacctta 159  Q
    |||||||||||||| |||| ||||| |||||||||||||||    
T  25561 atacactatgattattgagagttagcctcacccttacctta 25521  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 51915 - 51962
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  51915 gtttctacacttt-caattcaacaatctataatcaaaacctaaacccaa 51962  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 68902 - 68949
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  68902 gtttctacacttt-caattcaacaatctataatcaaaacctaaacccaa 68949  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 1223 - 1187
Alignment:
Q  145 ctcacccttaccttaattcagacaaacaactctacaa 181  Q
    ||||||||||||||||||||||  |||||||||||||    
T  1223 ctcacccttaccttaattcagatgaacaactctacaa 1187  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 67618 - 67665
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  67618 gtttctacacttt-caattcaacaatctataatcaaaacctaaacccaa 67665  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 36585 - 36625
Alignment:
Q  145 ctcacccttaccttaattcagacaaac-aactctacaaaat 184  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  36585 ctcacccttaccttaattcagacgaacaaactctacaaaat 36625  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 135484 - 135528
Alignment:
Q  115 aattatacactatgattactgagtgttagtctcacccttacctta 159  Q
    ||||||| |||||||||| |||| | |||||||||||||||||||    
T  135484 aattatatactatgattattgagagatagtctcacccttacctta 135528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 189646 - 189701
Alignment:
Q  31 gtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaa 87  Q
    |||| |||||| ||||||||||||||| ||||||||||||||| ||| ||| |||||    
T  189646 gtttgtacactcttcaattcaaaaatc-ataatcaaaacctaacccccattttccaa 189701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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