View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9335_low_11 (Length: 203)
Name: NF9335_low_11
Description: NF9335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9335_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 36780494 - 36780327
Alignment:
| Q |
22 |
gagattattgtttaagttatattagaagttagttgtttctgattagtcgttggttgttatattagttacatcaggatcactgtatacaatgatcctacat |
121 |
Q |
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| T |
36780494 |
gagattattgtctaagttatattagaagttagctgtttctgattagttgttggttgttatattagttacatcaggatcactatatacaatgatcctacat |
36780395 |
T |
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| Q |
122 |
taactcgtaatcaacaacgacaaactatcaattttaaaatagtttttctatcacattttccacctttg |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
36780394 |
taactcgtaatcaacaacgacaaactatcaattttaaaatagtttttctatcacattttccgcctttg |
36780327 |
T |
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