View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9337_high_15 (Length: 264)
Name: NF9337_high_15
Description: NF9337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9337_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 32688397 - 32688141
Alignment:
| Q |
1 |
tctcttagccgccaacatatgagaatattcatggatctgctaatatgaccaacactggtcatgaatgagatcatttatataattaattgcggtccagaag |
100 |
Q |
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| T |
32688397 |
tctcttagccgccaacatatgagaatattcatggatctgctaatatgaccaacactggtcatgaatgagatcatttatataattaattgcggtccagaag |
32688298 |
T |
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| Q |
101 |
agttattggataattccattatctcaacccaaaacatatacaaaatataatctaatataactacagcaattaagtcaatgattttgtaccaaaccataat |
200 |
Q |
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| T |
32688297 |
agttattggataattccattatctcaacccaaaacatatacaaaatataatctaatataactacagcaattaagtcaatgattttgtaccaaaccataat |
32688198 |
T |
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| Q |
201 |
gaaaagatggaagagagaagttagttgctaaatcatttttgttcggtttctctgctt |
257 |
Q |
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| T |
32688197 |
gaaaagatggaagagagaagttagttgctaaatcatttttgttcggtttctatgctt |
32688141 |
T |
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