View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9339_high_3 (Length: 250)
Name: NF9339_high_3
Description: NF9339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9339_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 32574160 - 32573926
Alignment:
| Q |
1 |
ttaacattgtatgcagaacactcacatgcatgtcgacatggtttcttcttctgttcagacatgaataaataaataaaatattagtagtatataattacgt |
100 |
Q |
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| T |
32574160 |
ttaacattgtatgcagaacactcacatgcatgtcgacatggtttcttcttctgttcagacatgaataaataaataaaatattagtagtatataattacgt |
32574061 |
T |
|
| Q |
101 |
actatgctaatttattcacgttcacatgttataccaacaaccttctttaattatatatacatgccttagactgttctaagttctaactcccctaaaggac |
200 |
Q |
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| T |
32574060 |
attatgctaatttattcacgttcacatgttataccaacaaccttctttaattatatatacatgccttagactgttctaagttctaactcccctaaaggac |
32573961 |
T |
|
| Q |
201 |
caaacgtaacgaactccattaaatatatgtgccct |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
32573960 |
caaacgtaacgaactccattaaatatatgtgccct |
32573926 |
T |
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