View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9344_low_22 (Length: 355)
Name: NF9344_low_22
Description: NF9344
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9344_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 15 - 339
Target Start/End: Original strand, 30021948 - 30022272
Alignment:
| Q |
15 |
ttctactttacttgttgttgacttcctctctttggtgtattgggatcactaaatgatttgttttcttgattcataaatttgcattggtaaattataaaga |
114 |
Q |
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| T |
30021948 |
ttctactttacttgttgttgacttcctctctttggtgtattgggatcactaaatgatttgttttcttgattcataaatttgcattggtaaattataaaga |
30022047 |
T |
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| Q |
115 |
agctactatcgatgcacacatcacacatgcaacgtgaagaaacaagtgcaaaggctatcaaaagatactagcattgtggtgactacttatgagggaattc |
214 |
Q |
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| T |
30022048 |
agctactatcgatgcacacatcacacatgcaacgtgaagaaacaagtgcaaaggctatcaaaagatactagcattgtggtgactacttatgagggaattc |
30022147 |
T |
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| Q |
215 |
acaaccacccatgcgagaagctgatggaaactctaactcctcttctaaagcaaatacagtttcttgctagtttgtaattgtgaaattgtttttcttttat |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30022148 |
acaaccacccatgcgagaagctgatggaaactctaactcctcttctaaagcaaatacagtttcttgctagtttgtaattgtgaaattgtttttcttttat |
30022247 |
T |
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| Q |
315 |
atacaaaaagctacctacatgtatg |
339 |
Q |
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||||||||||||||||||||||||| |
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| T |
30022248 |
atacaaaaagctacctacatgtatg |
30022272 |
T |
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