View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9344_low_5 (Length: 607)

Name: NF9344_low_5
Description: NF9344
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9344_low_5
NF9344_low_5
[»] chr4 (64 HSPs)
chr4 (406-589)||(38996979-38997164)
chr4 (198-308)||(38996771-38996881)
chr4 (15-137)||(3930410-3930533)
chr4 (15-137)||(16555747-16555871)
chr4 (15-134)||(13198606-13198728)
chr4 (15-68)||(11241620-11241673)
chr4 (84-137)||(56505693-56505746)
chr4 (15-70)||(5206189-5206244)
chr4 (39-137)||(39415481-39415578)
chr4 (84-137)||(4239367-4239420)
chr4 (84-137)||(50678779-50678832)
chr4 (87-137)||(292782-292832)
chr4 (84-134)||(36096476-36096526)
chr4 (84-137)||(293218-293271)
chr4 (84-136)||(8181992-8182045)
chr4 (84-137)||(13198907-13198960)
chr4 (84-137)||(24775784-24775837)
chr4 (84-137)||(28196346-28196399)
chr4 (84-137)||(28196774-28196827)
chr4 (84-137)||(32703651-32703704)
chr4 (84-137)||(36095817-36095870)
chr4 (84-133)||(49178817-49178866)
chr4 (84-137)||(50679425-50679478)
chr4 (84-137)||(54508815-54508868)
chr4 (85-137)||(22681881-22681933)
chr4 (84-136)||(25161879-25161931)
chr4 (89-137)||(56506580-56506628)
chr4 (86-137)||(9380744-9380795)
chr4 (84-137)||(169013-169067)
chr4 (84-137)||(9023244-9023297)
chr4 (84-137)||(9023681-9023734)
chr4 (88-137)||(9380307-9380356)
chr4 (84-137)||(11241662-11241714)
chr4 (84-137)||(16555515-16555568)
chr4 (84-137)||(18077203-18077256)
chr4 (15-68)||(22681651-22681703)
chr4 (84-137)||(25225399-25225452)
chr4 (84-137)||(26207747-26207800)
chr4 (84-132)||(27304894-27304943)
chr4 (84-137)||(32703225-32703278)
chr4 (84-137)||(39744030-39744083)
chr4 (84-137)||(39744466-39744519)
chr4 (84-137)||(43051253-43051306)
chr4 (84-137)||(48405962-48406014)
chr4 (84-132)||(49178644-49178693)
chr4 (84-136)||(11529169-11529221)
chr4 (84-136)||(22681576-22681627)
chr4 (15-67)||(35393548-35393600)
chr4 (84-136)||(43292038-43292090)
chr4 (86-137)||(7603422-7603472)
chr4 (84-137)||(23432476-23432530)
chr4 (84-137)||(23539841-23539892)
chr4 (84-134)||(43050610-43050660)
chr4 (84-137)||(169440-169493)
chr4 (84-136)||(7603146-7603196)
chr4 (84-132)||(8488312-8488361)
chr4 (84-137)||(23540253-23540306)
chr4 (84-137)||(26207361-26207413)
chr4 (84-137)||(35393777-35393829)
chr4 (84-137)||(45830197-45830250)
chr4 (85-137)||(39086625-39086677)
chr4 (32-72)||(50678846-50678885)
chr4 (32-72)||(50679372-50679411)
chr4 (84-124)||(54509116-54509156)
[»] scaffold0802 (2 HSPs)
scaffold0802 (15-137)||(1350-1474)
scaffold0802 (84-137)||(1118-1171)
[»] chr7 (63 HSPs)
chr7 (15-137)||(3687587-3687710)
chr7 (15-137)||(9412255-9412379)
chr7 (24-137)||(29291982-29292095)
chr7 (20-70)||(5349697-5349747)
chr7 (84-137)||(44599489-44599542)
chr7 (84-137)||(44600136-44600189)
chr7 (89-137)||(23686723-23686771)
chr7 (15-70)||(35080182-35080237)
chr7 (84-137)||(9035294-9035347)
chr7 (84-137)||(10533034-10533087)
chr7 (84-137)||(13772902-13772955)
chr7 (84-137)||(13863313-13863366)
chr7 (84-137)||(23686421-23686473)
chr7 (84-137)||(37888833-37888886)
chr7 (84-137)||(37889260-37889313)
chr7 (84-137)||(37972397-37972450)
chr7 (84-137)||(46816312-46816365)
chr7 (84-136)||(8953890-8953941)
chr7 (85-137)||(18925062-18925114)
chr7 (15-58)||(6908444-6908487)
chr7 (15-74)||(34235909-34235968)
chr7 (91-137)||(13863964-13864010)
chr7 (84-134)||(20418891-20418941)
chr7 (87-137)||(29292922-29292972)
chr7 (84-137)||(3205094-3205147)
chr7 (84-137)||(8643767-8643820)
chr7 (84-137)||(9034867-9034920)
chr7 (84-137)||(9412023-9412076)
chr7 (84-137)||(13772641-13772694)
chr7 (84-137)||(16198978-16199031)
chr7 (84-137)||(17156967-17157020)
chr7 (84-137)||(20419325-20419378)
chr7 (84-137)||(22740156-22740209)
chr7 (84-137)||(30857905-30857958)
chr7 (84-137)||(33628661-33628714)
chr7 (84-130)||(5735382-5735429)
chr7 (84-135)||(29291808-29291859)
chr7 (86-137)||(29293349-29293400)
chr7 (84-137)||(3204669-3204720)
chr7 (84-137)||(3687353-3687407)
chr7 (86-136)||(5735253-5735303)
chr7 (84-134)||(18863970-18864020)
chr7 (84-133)||(18925230-18925280)
chr7 (89-134)||(5735553-5735598)
chr7 (84-137)||(6908213-6908265)
chr7 (84-137)||(13741557-13741610)
chr7 (84-137)||(13744234-13744286)
chr7 (84-137)||(35079960-35080012)
chr7 (84-137)||(37971960-37972013)
chr7 (85-133)||(38191387-38191435)
chr7 (84-137)||(38191566-38191619)
chr7 (84-137)||(48359320-48359372)
chr7 (32-72)||(8643714-8643753)
chr7 (32-72)||(13863905-13863944)
chr7 (15-51)||(15567219-15567255)
chr7 (85-137)||(18864404-18864455)
chr7 (87-134)||(27096168-27096216)
chr7 (87-134)||(27182087-27182135)
chr7 (87-135)||(33628397-33628444)
chr7 (97-137)||(34235738-34235778)
chr7 (85-137)||(38826915-38826967)
chr7 (32-72)||(44599556-44599595)
chr7 (32-72)||(44600083-44600122)
[»] chr3 (45 HSPs)
chr3 (15-137)||(20968950-20969073)
chr3 (25-137)||(10293608-10293722)
chr3 (15-71)||(18874957-18875013)
chr3 (15-134)||(9026739-9026856)
chr3 (84-137)||(18874882-18874935)
chr3 (84-137)||(47666336-47666389)
chr3 (84-137)||(1927772-1927825)
chr3 (84-137)||(10293910-10293963)
chr3 (84-137)||(17372298-17372351)
chr3 (84-137)||(18875192-18875245)
chr3 (84-137)||(47871123-47871175)
chr3 (84-137)||(48159897-48159950)
chr3 (84-137)||(53766580-53766633)
chr3 (84-134)||(3644538-3644588)
chr3 (84-137)||(21895657-21895711)
chr3 (84-137)||(8314013-8314066)
chr3 (84-137)||(9027034-9027086)
chr3 (84-137)||(10348800-10348853)
chr3 (84-137)||(20968718-20968771)
chr3 (84-137)||(40848962-40849015)
chr3 (84-137)||(42672978-42673030)
chr3 (84-137)||(45060872-45060925)
chr3 (84-137)||(48160334-48160387)
chr3 (84-137)||(53687888-53687941)
chr3 (84-136)||(22429159-22429211)
chr3 (86-134)||(26007622-26007670)
chr3 (85-137)||(47665911-47665963)
chr3 (84-134)||(13657622-13657673)
chr3 (84-134)||(1928435-1928484)
chr3 (84-134)||(23630036-23630086)
chr3 (84-134)||(26540694-26540743)
chr3 (84-134)||(27238901-27238951)
chr3 (84-137)||(47870823-47870876)
chr3 (84-134)||(53766166-53766216)
chr3 (84-137)||(3353128-3353180)
chr3 (84-137)||(8315083-8315135)
chr3 (84-137)||(21896512-21896564)
chr3 (84-137)||(24485461-24485513)
chr3 (84-137)||(27238465-27238518)
chr3 (84-137)||(40848521-40848573)
chr3 (88-137)||(42455790-42455839)
chr3 (84-137)||(42673297-42673349)
chr3 (85-132)||(18875017-18875065)
chr3 (85-137)||(44008403-44008454)
chr3 (89-137)||(45060596-45060644)
[»] chr1 (62 HSPs)
chr1 (15-137)||(41082909-41083032)
chr1 (15-137)||(47955306-47955430)
chr1 (15-134)||(22149632-22149750)
chr1 (15-135)||(17518534-17518653)
chr1 (84-137)||(4692434-4692487)
chr1 (84-137)||(8108994-8109047)
chr1 (15-70)||(8108952-8109007)
chr1 (84-134)||(1176839-1176889)
chr1 (84-137)||(46824279-46824332)
chr1 (84-137)||(48190771-48190824)
chr1 (84-137)||(49284409-49284462)
chr1 (36-134)||(31847898-31847997)
chr1 (84-135)||(50526473-50526524)
chr1 (84-137)||(6703895-6703948)
chr1 (84-137)||(9347126-9347179)
chr1 (84-137)||(13589660-13589712)
chr1 (84-137)||(13918446-13918499)
chr1 (84-137)||(32163044-32163097)
chr1 (84-137)||(39690794-39690847)
chr1 (84-137)||(39692001-39692054)
chr1 (84-137)||(44911025-44911078)
chr1 (84-137)||(48191356-48191409)
chr1 (84-137)||(48313793-48313846)
chr1 (84-134)||(1177019-1177069)
chr1 (84-134)||(44911438-44911488)
chr1 (87-137)||(49317752-49317801)
chr1 (84-134)||(50430082-50430132)
chr1 (84-137)||(6002237-6002290)
chr1 (84-137)||(9347552-9347604)
chr1 (84-137)||(20371354-20371406)
chr1 (84-137)||(20480613-20480665)
chr1 (84-137)||(21687025-21687078)
chr1 (84-137)||(27172116-27172168)
chr1 (84-137)||(47955609-47955662)
chr1 (84-137)||(48105117-48105170)
chr1 (85-137)||(6703460-6703512)
chr1 (84-132)||(32162734-32162782)
chr1 (86-134)||(46823846-46823894)
chr1 (85-136)||(13918869-13918920)
chr1 (87-137)||(47498301-47498349)
chr1 (84-134)||(8108724-8108774)
chr1 (84-137)||(20371040-20371091)
chr1 (87-137)||(27172545-27172595)
chr1 (84-134)||(28634158-28634208)
chr1 (84-134)||(48104681-48104731)
chr1 (84-137)||(19008751-19008804)
chr1 (84-137)||(20480168-20480220)
chr1 (84-137)||(26814694-26814747)
chr1 (84-137)||(26815120-26815173)
chr1 (84-137)||(28633720-28633773)
chr1 (84-137)||(31848193-31848246)
chr1 (84-137)||(41083212-41083264)
chr1 (85-134)||(42611188-42611237)
chr1 (89-134)||(46057199-46057243)
chr1 (88-137)||(50615240-50615289)
chr1 (84-137)||(50615622-50615674)
chr1 (88-137)||(50623068-50623117)
chr1 (84-137)||(50623450-50623502)
chr1 (32-72)||(6002304-6002343)
chr1 (87-134)||(31848019-31848067)
chr1 (85-136)||(46056904-46056953)
chr1 (32-72)||(49284476-49284515)
[»] chr2 (50 HSPs)
chr2 (15-134)||(40469659-40469780)
chr2 (15-137)||(30190923-30191047)
chr2 (15-137)||(6171387-6171510)
chr2 (15-137)||(20347394-20347518)
chr2 (15-134)||(32673073-32673193)
chr2 (15-137)||(11883623-11883747)
chr2 (15-137)||(26737711-26737835)
chr2 (38-137)||(24832331-24832432)
chr2 (84-137)||(2639483-2639536)
chr2 (84-137)||(11883927-11883980)
chr2 (84-137)||(18296694-18296747)
chr2 (84-137)||(26841587-26841640)
chr2 (84-137)||(2638820-2638873)
chr2 (84-137)||(5378661-5378714)
chr2 (84-137)||(17850978-17851031)
chr2 (84-137)||(26842239-26842292)
chr2 (84-137)||(37720204-37720257)
chr2 (88-137)||(41790917-41790966)
chr2 (84-136)||(18296077-18296129)
chr2 (84-135)||(19141446-19141496)
chr2 (84-134)||(7591204-7591254)
chr2 (84-134)||(8851151-8851201)
chr2 (37-135)||(15321394-15321492)
chr2 (84-134)||(18055317-18055367)
chr2 (84-137)||(5379960-5380013)
chr2 (84-137)||(8851583-8851636)
chr2 (84-137)||(30191226-30191279)
chr2 (85-137)||(6171156-6171207)
chr2 (85-137)||(6495723-6495775)
chr2 (84-134)||(17345736-17345784)
chr2 (85-135)||(6325349-6325399)
chr2 (84-134)||(15321515-15321565)
chr2 (84-134)||(26692399-26692449)
chr2 (84-134)||(26692821-26692871)
chr2 (84-137)||(26737482-26737533)
chr2 (84-137)||(7664248-7664301)
chr2 (84-137)||(7664674-7664727)
chr2 (84-137)||(16910827-16910880)
chr2 (84-137)||(20347163-20347216)
chr2 (84-132)||(26737657-26737706)
chr2 (84-137)||(40469427-40469480)
chr2 (32-72)||(2638887-2638926)
chr2 (32-72)||(2639430-2639469)
chr2 (32-72)||(7591268-7591307)
chr2 (85-137)||(17346037-17346088)
chr2 (32-72)||(26841654-26841693)
chr2 (32-72)||(26842186-26842225)
chr2 (85-137)||(29230282-29230334)
chr2 (85-137)||(40221313-40221364)
chr2 (94-134)||(40221584-40221624)
[»] chr8 (61 HSPs)
chr8 (15-137)||(12281124-12281248)
chr8 (15-137)||(43245871-43245995)
chr8 (15-135)||(765736-765858)
chr8 (26-137)||(41662344-41662457)
chr8 (15-137)||(15156115-15156239)
chr8 (15-137)||(16928942-16929064)
chr8 (15-74)||(37752179-37752238)
chr8 (15-71)||(74915-74971)
chr8 (84-137)||(9823362-9823415)
chr8 (84-137)||(39724049-39724102)
chr8 (85-137)||(13026635-13026687)
chr8 (15-74)||(34313994-34314053)
chr8 (84-134)||(13027282-13027332)
chr8 (84-137)||(13936723-13936775)
chr8 (84-137)||(15155883-15155936)
chr8 (84-137)||(16929243-16929296)
chr8 (84-137)||(22851390-22851443)
chr8 (84-137)||(24473343-24473396)
chr8 (84-137)||(37752084-37752137)
chr8 (84-137)||(37752417-37752470)
chr8 (84-137)||(43246177-43246230)
chr8 (36-137)||(3463896-3463999)
chr8 (15-67)||(43162467-43162519)
chr8 (84-135)||(25438794-25438845)
chr8 (84-134)||(15444648-15444698)
chr8 (84-134)||(34498125-34498175)
chr8 (84-137)||(9623502-9623555)
chr8 (84-137)||(9822748-9822801)
chr8 (84-137)||(12281427-12281480)
chr8 (84-137)||(13937390-13937443)
chr8 (84-137)||(20861639-20861692)
chr8 (85-134)||(22786843-22786892)
chr8 (84-137)||(23123338-23123391)
chr8 (84-137)||(34498556-34498609)
chr8 (84-137)||(37396708-37396761)
chr8 (88-137)||(37397150-37397199)
chr8 (84-137)||(41662107-41662160)
chr8 (85-137)||(41662521-41662573)
chr8 (84-123)||(3463654-3463693)
chr8 (87-137)||(6092777-6092825)
chr8 (90-137)||(9465607-9465653)
chr8 (15-54)||(18019872-18019911)
chr8 (88-135)||(33726696-33726743)
chr8 (15-74)||(37670185-37670243)
chr8 (87-137)||(3307338-3307388)
chr8 (84-134)||(15042148-15042198)
chr8 (84-137)||(34313765-34313816)
chr8 (84-132)||(18019915-18019964)
chr8 (84-137)||(24473769-24473822)
chr8 (84-133)||(43162540-43162588)
chr8 (87-123)||(7127666-7127702)
chr8 (22-70)||(7127888-7127936)
chr8 (32-72)||(9823309-9823348)
chr8 (32-72)||(13026702-13026741)
chr8 (32-72)||(13027229-13027268)
chr8 (85-137)||(16169174-16169225)
chr8 (85-117)||(22851958-22851990)
chr8 (84-135)||(23123518-23123567)
chr8 (32-72)||(39723469-39723508)
chr8 (32-72)||(39723996-39724035)
chr8 (85-137)||(43162234-43162285)
[»] chr6 (27 HSPs)
chr6 (15-137)||(3403919-3404043)
chr6 (15-134)||(30388294-30388413)
chr6 (15-137)||(18242086-18242210)
chr6 (84-137)||(3403717-3403770)
chr6 (84-137)||(33828990-33829043)
chr6 (84-137)||(33829637-33829690)
chr6 (36-137)||(21031979-21032081)
chr6 (15-74)||(2762548-2762607)
chr6 (84-137)||(10039676-10039728)
chr6 (84-137)||(18241854-18241907)
chr6 (22-137)||(13579589-13579704)
chr6 (84-137)||(7654549-7654602)
chr6 (84-137)||(10087859-10087912)
chr6 (84-137)||(11656783-11656836)
chr6 (88-137)||(21032285-21032334)
chr6 (84-137)||(33655116-33655168)
chr6 (84-137)||(33974300-33974353)
chr6 (84-134)||(33658566-33658617)
chr6 (84-134)||(3825530-3825579)
chr6 (87-137)||(30388062-30388111)
chr6 (84-132)||(2762611-2762660)
chr6 (84-132)||(10039844-10039893)
chr6 (87-132)||(12714436-12714481)
chr6 (84-137)||(23250592-23250644)
chr6 (84-137)||(31598274-31598326)
chr6 (32-72)||(33829057-33829096)
chr6 (32-72)||(33829584-33829623)
[»] chr5 (46 HSPs)
chr5 (15-137)||(18433015-18433139)
chr5 (15-137)||(25115757-25115881)
chr5 (15-137)||(25174849-25174973)
chr5 (15-137)||(26020450-26020574)
chr5 (15-134)||(34576870-34576989)
chr5 (15-70)||(22429155-22429210)
chr5 (84-137)||(18817612-18817665)
chr5 (15-70)||(5187591-5187646)
chr5 (85-131)||(16726084-16726130)
chr5 (84-137)||(5187831-5187884)
chr5 (84-137)||(12498567-12498620)
chr5 (84-137)||(12498929-12498982)
chr5 (84-137)||(18433317-18433370)
chr5 (84-137)||(18816952-18817005)
chr5 (84-137)||(22429197-22429249)
chr5 (84-137)||(25116062-25116115)
chr5 (84-137)||(25175152-25175205)
chr5 (84-137)||(26571165-26571218)
chr5 (84-137)||(33324839-33324892)
chr5 (15-67)||(9665598-9665650)
chr5 (85-137)||(34147512-34147564)
chr5 (84-134)||(9665560-9665608)
chr5 (84-134)||(11351428-11351478)
chr5 (87-137)||(16466746-16466796)
chr5 (84-134)||(21207229-21207279)
chr5 (84-137)||(11350808-11350860)
chr5 (84-137)||(19514964-19515017)
chr5 (84-137)||(22428934-22428986)
chr5 (84-137)||(23011079-23011131)
chr5 (85-134)||(31569910-31569958)
chr5 (84-137)||(34577165-34577217)
chr5 (84-136)||(22729441-22729492)
chr5 (84-134)||(22629525-22629576)
chr5 (87-137)||(10098519-10098569)
chr5 (84-137)||(3888239-3888292)
chr5 (84-137)||(9665828-9665879)
chr5 (84-137)||(25940521-25940574)
chr5 (84-137)||(26570729-26570782)
chr5 (84-137)||(37610202-37610254)
chr5 (84-137)||(37780320-37780372)
chr5 (84-137)||(41383168-41383220)
chr5 (85-137)||(12441042-12441093)
chr5 (38-74)||(12441265-12441301)
chr5 (32-72)||(18817559-18817598)
chr5 (87-134)||(23011261-23011309)
chr5 (85-137)||(43464194-43464245)
[»] scaffold0319 (2 HSPs)
scaffold0319 (15-137)||(6627-6750)
scaffold0319 (84-137)||(6394-6447)
[»] scaffold0192 (1 HSPs)
scaffold0192 (15-137)||(25299-25423)
[»] scaffold0110 (2 HSPs)
scaffold0110 (15-137)||(45737-45860)
scaffold0110 (86-137)||(45537-45587)
[»] scaffold0002 (1 HSPs)
scaffold0002 (15-137)||(411923-412045)
[»] scaffold1221 (2 HSPs)
scaffold1221 (15-68)||(1552-1605)
scaffold1221 (84-137)||(1511-1563)
[»] scaffold0598 (1 HSPs)
scaffold0598 (15-136)||(6805-6927)
[»] scaffold0041 (1 HSPs)
scaffold0041 (84-137)||(38696-38749)
[»] scaffold0001 (5 HSPs)
scaffold0001 (84-137)||(438930-438983)
scaffold0001 (49-137)||(439165-439253)
scaffold0001 (84-134)||(183367-183416)
scaffold0001 (91-137)||(183670-183716)
scaffold0001 (87-134)||(183544-183592)
[»] scaffold0015 (2 HSPs)
scaffold0015 (85-137)||(17158-17209)
scaffold0015 (27-74)||(16918-16965)
[»] scaffold0535 (1 HSPs)
scaffold0535 (87-137)||(10012-10062)
[»] scaffold0328 (4 HSPs)
scaffold0328 (84-137)||(6796-6849)
scaffold0328 (84-137)||(6152-6205)
scaffold0328 (32-73)||(6218-6258)
scaffold0328 (32-72)||(6743-6782)
[»] scaffold0029 (1 HSPs)
scaffold0029 (84-137)||(9905-9958)
[»] scaffold0460 (2 HSPs)
scaffold0460 (84-137)||(764-816)
scaffold0460 (87-137)||(330-380)
[»] scaffold0376 (2 HSPs)
scaffold0376 (84-137)||(7455-7507)
scaffold0376 (84-137)||(7601-7653)
[»] scaffold0069 (2 HSPs)
scaffold0069 (84-137)||(50508-50560)
scaffold0069 (84-137)||(50075-50126)
[»] scaffold0017 (1 HSPs)
scaffold0017 (84-137)||(185275-185328)
[»] scaffold0009 (1 HSPs)
scaffold0009 (84-137)||(205687-205739)
[»] scaffold0035 (1 HSPs)
scaffold0035 (85-136)||(72967-73018)


Alignment Details
Target: chr4 (Bit Score: 143; Significance: 8e-75; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 406 - 589
Target Start/End: Original strand, 38996979 - 38997164
Alignment:
Q  406 ttgtttggataatttagttcctccagaggtaatgcttgggtccctttgggaaatgtggcaacaagatgtcatggaacaatatgaaccacaatattcatac 505  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38996979 ttgtttggataatttagttccgccagaggtaatgcttgggtccctttgggaaatgtggcaacaagatgtcatggaacaatatgaaccacaatattcatac 38997078  T
Q  506 tgatactactactaacttact--nnnnnnnngggacgcttggccatatcctgaattcagtggaaatgagctcactggcaccatatt 589  Q
    |||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38997079 tgatactactactaccttactaaaaaaaaaagggacgcttggccatatcctgaattcagtggaaatgagctcactggcaccatatt 38997164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 198 - 308
Target Start/End: Original strand, 38996771 - 38996881
Alignment:
Q  198 aattcatccaatccaaactgcattttttaagctcgtagaaacaaaactttttccatgaaaagttgtaatgcttgtgtgtatttagggtaatgaagaggaa 297  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38996771 aattcatccaatccaaactgcattttttaagctcgtggaaacaaaactttttccatgaaaagttgtaacgcttgtgtgtatttagggtaatgaagaggaa 38996870  T
Q  298 gagaggagatg 308  Q
    ||||| |||||    
T  38996871 gagagaagatg 38996881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 3930410 - 3930533
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgct--caacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||   ||         ||||||||||| |||||||| ||||||||    
T  3930410 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaaga 3930509  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  3930510 taggggg-aaaagtgcaattaagcc 3930533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 16555747 - 16555871
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||| ||||||||    
T  16555747 cacaaagatggggtgtaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaaga 16555846  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    || |||| |||||||||||||||||    
T  16555847 taagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 13198728 - 13198606
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc---aacnnnnnnnngggtgcaaaattgcacaattggcaaaag 111  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||   ||         ||||||||||| ||||||||||||||||    
T  13198728 cacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaag 13198629  T
Q  112 atagggggaaaaagtgcaattaa 134  Q
    |||  ||  ||||||||||||||    
T  13198628 ataaaggagaaaagtgcaattaa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 11241620 - 11241673
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatc 68  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11241620 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatc 11241673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 56505746 - 56505693
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  56505746 gggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 56505693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 5206189 - 5206244
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgc 70  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  5206189 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatagggtgcaaaatcgc 5206244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 39415481 - 39415578
Alignment:
Q  39 aaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnngggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||| ||| ||||||||||||         || ||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  39415481 aaagggggcaaaaagatggagtgcaaaatcgctcaa-aaaaaaagggatgcaaaattgcacaattagcaaaagatagagggaaaaagtgcagttaagcc 39415578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 4239367 - 4239420
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  4239367 gggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 50678832 - 50678779
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  50678832 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 50678779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 292832 - 292782
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  292832 tgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 36096476 - 36096526
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  36096476 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 293218 - 293271
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  293218 gggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcc 293271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 8182045 - 8181992
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaa-gatagggggaaaaagtgcaattaagc 136  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  8182045 gggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 13198907 - 13198960
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  13198907 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 13198960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 24775784 - 24775837
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||||||||| || |||||||||||||||||    
T  24775784 gggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 24775837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 28196399 - 28196346
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  28196399 gggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 28196346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 28196774 - 28196827
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  28196774 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 28196827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 32703651 - 32703704
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  32703651 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 36095870 - 36095817
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||| ||||||||||||    
T  36095870 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 36095817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 49178817 - 49178866
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaatta 133  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  49178817 gggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 50679425 - 50679478
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| | |||||||||||||||||||||  |||||||||||||||||    
T  50679425 gggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 54508868 - 54508815
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  ||||||||||||||||| || ||||||||||||||||||||    
T  54508868 gggtgcaaaatcacacaattggcaaaagattggaggaaaaagtgcaattaagcc 54508815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 22681881 - 22681933
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||  ||||||||||| || |||||||||||||||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagcc 22681933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 25161931 - 25161879
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||||||||||||    
T  25161931 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 56506580 - 56506628
Alignment:
Q  89 caaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||    
T  56506580 caaaattgcacaattggcaaaagataagggtgaaaagtgcaattaagcc 56506628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 9380744 - 9380795
Alignment:
Q  86 gtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  9380744 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 169067 - 169013
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagataggggga-aaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||    
T  169067 gggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagcc 169013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 9023297 - 9023244
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||  |||||||||||||||||    
T  9023297 gggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcc 9023244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 9023681 - 9023734
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  9023681 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 9023734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 9380356 - 9380307
Alignment:
Q  88 gcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  9380356 gcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 11241662 - 11241714
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  ||||||||||||||||||||||| |||||| ||||||||||    
T  11241662 gggtgcaaaatcccacaattggcaaaagataggggg-aaaagtacaattaagcc 11241714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 16555568 - 16555515
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  ||||||||| |||| |||||||||||||||||    
T  16555568 gggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 16555515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 18077203 - 18077256
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||| |||||||  |||||||||||||||||    
T  18077203 gggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcc 18077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 22681703 - 22681651
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatc 68  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  22681703 cacaaagatggggtgcaaaattagaaa-ggggcaaaaagatggggtgcaaaatc 22681651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 25225399 - 25225452
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||||||||| |  | |||||||||||||||    
T  25225399 gggtgcaaaatcgcacaattggcaaaagataggagacagaagtgcaattaagcc 25225452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 26207747 - 26207800
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||| ||||||||||||    
T  26207747 gggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 26207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 27304894 - 27304943
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaa-gatagggggaaaaagtgcaatt 132  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  27304894 gggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 32703278 - 32703225
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||| ||| ||||||||||||||  |||||||| |||||||||||||||||    
T  32703278 gggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 32703225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 39744083 - 39744030
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||| ||||| |||||||||| |||  ||||||||||||||||||||||||||    
T  39744083 gggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagcc 39744030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 39744466 - 39744519
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  39744466 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 39744519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 43051253 - 43051306
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  ||||||||||||||||||||||  |||| ||||||||||||    
T  43051253 gggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcc 43051306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 48406014 - 48405962
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||| ||||||||||  |||||||| |||||||||||||||||    
T  48406014 gggtgcaaaattgcataattggcaaactataggggg-aaaagtgcaattaagcc 48405962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 49178693 - 49178644
Alignment:
Q  84 gggtgcaaaattgcacaattggc-aaaagatagggggaaaaagtgcaatt 132  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  49178693 gggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaatt 49178644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 11529221 - 11529169
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    |||||||||||  ||||||||||||||| ||||| | ||||||||||||||||    
T  11529221 gggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 22681627 - 22681576
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    ||||||||||| ||||||||| ||||||||||||||  |||||||||||||||    
T  22681627 gggtgcaaaatcgcacaattgacaaaagataggggg-gaaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 35393600 - 35393548
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaat 67  Q
    |||| |||| ||||||||||||| |||||||| |||||||||||||| |||||    
T  35393600 cacaaagatagggtgcaaaatcaaaaagggggtaaaaagatggggtgcaaaat 35393548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 43292090 - 43292038
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    ||||||||||| ||||||||| ||||  ||||||| |||||||||||||||||    
T  43292090 gggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 7603422 - 7603472
Alignment:
Q  86 gtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||| |||||||||  |||||||| ||||||||||||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagata-ggggaaaaagtgcaattaagcc 7603472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 23432530 - 23432476
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaaga-tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| ||||||||||||| ||||| | ||||||| |||||||||||||||||    
T  23432530 gggtgcagaattgcacaattgacaaaaaaatagggggcaaaagtgcaattaagcc 23432476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 23539892 - 23539841
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||    
T  23539892 gggtgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaagcc 23539841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 43050660 - 43050610
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| |||||||||| |||||||||||   ||||||||||||||    
T  43050660 gggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaa 43050610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 169440 - 169493
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||| ||||||||||||    
T  169440 gggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 7603196 - 7603146
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    ||||||||||||||||||||   ||||||||||||  ||||||||||||||||    
T  7603196 gggtgcaaaattgcacaattaaaaaaagatagggg--aaaagtgcaattaagc 7603146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 8488361 - 8488312
Alignment:
Q  84 gggtgcaaaattgcacaattggc-aaaagatagggggaaaaagtgcaatt 132  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||||    
T  8488361 gggtgcaaaattgcacaattagcaaaaacatagggggcaaaagtgcaatt 8488312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 23540253 - 23540306
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||  |||||||||||||||||    
T  23540253 gggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 26207413 - 26207361
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||    
T  26207413 gggtgcaaaatcgcacaattggcaaactataggggg-gaaagtgcaattaagcc 26207361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 35393777 - 35393829
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||| | |||||||| ||||||||||||| | |||||||||||||||||    
T  35393777 gggtgcaaattcgcacaattagcaaaagatagggtg-aaaagtgcaattaagcc 35393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 45830197 - 45830250
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||| ||||| ||||||||| |||||||||||||  |||||||| ||||||||    
T  45830197 gggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaagcc 45830250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 39086625 - 39086677
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| ||||||||||||||  ||| |||  |||||||||||||||||    
T  39086625 ggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaagcc 39086677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 50678885 - 50678846
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  50678885 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 50678846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 50679372 - 50679411
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  50679372 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 50679411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 54509116 - 54509156
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaa 124  Q
    ||||||||||| |||||||| |||||| |||||||||||||    
T  54509116 gggtgcaaaatcgcacaattagcaaaaaatagggggaaaaa 54509156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 1350 - 1474
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||||||||||||    
T  1350 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaaga 1449  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  1450 tagggggaaaaagtgcaattaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 1171 - 1118
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  1171 gggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagcc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 3687587 - 3687710
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc-aacnnnnnnnngggtgcaaaattgcacaattggcaaaagat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||         ||||||||||| ||||||||||||||||||    
T  3687587 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagat 3687686  T
Q  114 agggggaaaaagtgcaattaagcc 137  Q
    |||||| |||||||||||||||||    
T  3687687 aggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 9412255 - 9412379
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||||||||||||    
T  9412255 cacaaagatggggtgcaaaatctgaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaaga 9412354  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  9412355 taggggggaaaagtgcaattaagcc 9412379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 29291982 - 29292095
Alignment:
Q  24 ggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnngggtgcaaaattgcacaattggcaaaagatagggggaaaa 123  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||||||| ||         ||||| ||||| |||||||| ||||||| ||| || ||||    
T  29291982 ggggtgcaaaatcagaaatggggcaaaaagatagggtgcaaaatcgctaaaaaaaagagggggtggaaaatcgcacaattagcaaaagttagaggaaaaa 29292081  T
Q  124 agtgcaattaagcc 137  Q
    ||||||||||||||    
T  29292082 agtgcaattaagcc 29292095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 5349697 - 5349747
Alignment:
Q  20 agatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgc 70  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  5349697 agatggggtgcaaaatcagaaagggggtaaaaagatggggtgcaaaatcgc 5349747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 44599542 - 44599489
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  44599542 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 44600136 - 44600189
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  44600136 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44600189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 23686723 - 23686771
Alignment:
Q  89 caaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  23686723 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcc 23686771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 35080182 - 35080237
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgc 70  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  35080182 cacaaagatgaggtgcaaaatcagaaaggaggcaaaaagatggggtgcaaaatcgc 35080237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 9035294 - 9035347
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  9035294 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 10533087 - 10533034
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  10533087 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 10533034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 13772902 - 13772955
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||| ||||||||| |||||||||||||||||    
T  13772902 gggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 13863366 - 13863313
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||| ||||||||||||    
T  13863366 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 13863313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 23686473 - 23686421
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  23686473 gggtgcaaaattgtacaattagcaaaagataggggg-aaaagtgcaattaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 37888886 - 37888833
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  37888886 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 37889260 - 37889313
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  37889260 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37889313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 37972397 - 37972450
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  37972397 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37972450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 46816312 - 46816365
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||    
T  46816312 gggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagcc 46816365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 8953890 - 8953941
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  8953890 gggtgcaaaattgcacaattaacaaaagataggggg-aaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 18925114 - 18925062
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcc 18925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 6908444 - 6908487
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggg 58  Q
    |||| |||||||||||||||||||||||| ||||||||||||||    
T  6908444 cacaaagatggggtgcaaaatcagaaaggaggcaaaaagatggg 6908487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 34235909 - 34235968
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaa 74  Q
    |||| |||||||||||| ||||||||| |||||||||||| || ||| ||||||||||||    
T  34235909 cacaaagatggggtgcagaatcagaaatggggcaaaaagacggcgtgcaaaatcgctcaa 34235968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 13863964 - 13864010
Alignment:
Q  91 aaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||    
T  13863964 aaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 13864010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 20418941 - 20418891
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||||||||||    
T  20418941 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 20418891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 29292972 - 29292922
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  29292972 tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 29292922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 3205094 - 3205147
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  3205094 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 3205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 8643767 - 8643820
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||| |||||||||||   |||||||||||||||||    
T  8643767 gggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagcc 8643820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 9034920 - 9034867
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||| ||| ||||||||||||||  |||||||| |||||||||||||||||    
T  9034920 gggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 9034867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 9412076 - 9412023
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  ||||||||| |||| |||||||||||||||||    
T  9412076 gggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 9412023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 13772694 - 13772641
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  ||||||| ||||||||||||| | |||||||||||||||||    
T  13772694 gggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcc 13772641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 16198978 - 16199031
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||  |||||||||||||||||||||    
T  16198978 gggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcc 16199031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 17157020 - 17156967
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  17157020 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 17156967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 20419325 - 20419378
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  20419325 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 20419378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 22740209 - 22740156
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  22740209 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 22740156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 30857905 - 30857958
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||| ||||||||| | |  |||||||||||||||||    
T  30857905 gggtgcaaaattgcacaattgacaaaagataagagacaaaagtgcaattaagcc 30857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 33628661 - 33628714
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| | ||||||||| |||||||||||||||| ||||    
T  33628661 gggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagcc 33628714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 5735429 - 5735382
Alignment:
Q  84 gggtgcaaaattgcacaattggc-aaaagatagggggaaaaagtgcaa 130  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  5735429 gggtgcaaaatcgcacaattggcaaaaagatagggagaaaaagtgcaa 5735382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 29291859 - 29291808
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaag 135  Q
    ||||||||||| ||| ||||  |||||||||||| |||||||||||||||||    
T  29291859 gggtgcaaaatcgcataattatcaaaagatagggagaaaaagtgcaattaag 29291808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 29293349 - 29293400
Alignment:
Q  86 gtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||| ||||||||||||||  |||||||| |||| ||||||||||||    
T  29293349 gtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 29293400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 3204720 - 3204669
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||    
T  3204720 gggtgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaagcc 3204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 3687407 - 3687353
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatag-ggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||| |||| |||||||||||||||||    
T  3687407 gggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaagcc 3687353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 5735303 - 5735253
Alignment:
Q  86 gtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    ||||||||| |||||||| || |||||||||||  ||||||||||||||||    
T  5735303 gtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaagc 5735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 18864020 - 18863970
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||| ||||  |||||||| ||||||||||||||    
T  18864020 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 18925230 - 18925280
Alignment:
Q  84 gggtgcaaaattgcacaattggc-aaaagatagggggaaaaagtgcaatta 133  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||| ||||||    
T  18925230 gggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaatta 18925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 5735553 - 5735598
Alignment:
Q  89 caaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    |||||| ||||||||   ||||||||||||||||||||||||||||    
T  5735553 caaaatcgcacaattaataaaagatagggggaaaaagtgcaattaa 5735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 6908265 - 6908213
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  ||| |||||||||| |||||||||||||||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagataggggg-aaaagtgcaattaagcc 6908213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 13741610 - 13741557
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||| |||  |||||||| |||| ||||||||||||    
T  13741610 gggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaagcc 13741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 13744234 - 13744286
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  13744234 gggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 13744286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 35080012 - 35079960
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||   ||||||| ||||||||||||||| |||||||||||||||||    
T  35080012 gggtgcaaaaccccacaattagcaaaagataggggg-aaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 37972013 - 37971960
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  | |||||  |||||||||||||||||    
T  37972013 gggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagcc 37971960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 38191435 - 38191387
Alignment:
Q  85 ggtgcaaaattgcacaattggc-aaaagatagggggaaaaagtgcaatta 133  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  38191435 ggtgcaaaatcgcacaattggcaaaaagata-ggggaaaaagtgcaatta 38191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 38191566 - 38191619
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||| ||||  ||||||||||||| ||||| ||||||||||||    
T  38191566 gggtgcaaaatcgcataattaacaaaagataggggtaaaaaatgcaattaagcc 38191619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 48359372 - 48359320
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  48359372 gggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 8643714 - 8643753
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  8643714 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 8643753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 13863905 - 13863944
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  13863905 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 13863944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 15567219 - 15567255
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaa 51  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  15567219 cacaaagatggggtgcaaaatcagaaagggtgcaaaa 15567255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 18864404 - 18864455
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| ||||||||||||||  |||||||| |||||| ||||||||||    
T  18864404 ggtgcaaaatcgcacaattggcaaactataggggg-aaaagtacaattaagcc 18864455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 27096216 - 27096168
Alignment:
Q  87 tgcaaaattgcacaattggcaaaa-gatagggggaaaaagtgcaattaa 134  Q
    |||||||| |||||||||| |||| ||||||||| ||||||||||||||    
T  27096216 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 27096168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 27182087 - 27182135
Alignment:
Q  87 tgcaaaattgcacaattggcaaaa-gatagggggaaaaagtgcaattaa 134  Q
    |||||||| |||||||||| |||| ||||||||| ||||||||||||||    
T  27182087 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 27182135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 33628444 - 33628397
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaag 135  Q
    ||||||||||||||||| |||||||||| || | |||||||||||||||    
T  33628444 tgcaaaattgcacaattagcaaaagataaggag-aaaagtgcaattaag 33628397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 34235778 - 34235738
Alignment:
Q  97 cacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||| || || |||||||||||||||||    
T  34235778 cacaattggcaaaagatgggagggaaaagtgcaattaagcc 34235738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 38826915 - 38826967
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| ||||||||| ||||  |||||||| |||| ||||||||||||    
T  38826915 ggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 38826967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 44599595 - 44599556
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  44599595 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 44599556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 44600083 - 44600122
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  44600083 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 44600122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 20968950 - 20969073
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc-aacnnnnnnnngggtgcaaaattgcacaattggcaaaagat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||         ||||||||||| ||||||||||||||||||    
T  20968950 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaaggggtgcaaaatcgcacaattggcaaaagat 20969049  T
Q  114 agggggaaaaagtgcaattaagcc 137  Q
    |||||| |||||||||||||||||    
T  20969050 aggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 10293722 - 10293608
Alignment:
Q  25 gggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaagatagggggaaa 122  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| ||||||||| ||||||||||||| |||    
T  10293722 gggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggaaaa 10293623  T
Q  123 aagtgcaattaagcc 137  Q
    || ||||||||||||    
T  10293622 aaatgcaattaagcc 10293608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 18875013 - 18874957
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgct 71  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18875013 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgct 18874957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 9026856 - 9026739
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnngggtgcaaaattgcacaattggcaaaagata 114  Q
    |||| ||| |||| |||||||||||||||||| |||||||||||||| ||||||||||||         ||||||||||||||||||||  |||||||||    
T  9026856 cacaaagacggggggcaaaatcagaaaggggg-aaaaagatggggtgcaaaatcgctcaaaaaataaaggggtgcaaaattgcacaattaacaaaagata 9026758  T
Q  115 gggggaaaaagtgcaattaa 134  Q
    || ||||||| |||||||||    
T  9026757 ggaggaaaaa-tgcaattaa 9026739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 18874935 - 18874882
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagcc 18874882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 47666336 - 47666389
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  47666336 gggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 47666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 1927825 - 1927772
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  1927825 gggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagcc 1927772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 10293910 - 10293963
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  10293910 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 17372351 - 17372298
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||| |||||||||||| |||||||||||||    
T  17372351 gggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 18875192 - 18875245
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| | |||||| ||||||||||||||| |||||||||||||||||    
T  18875192 gggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 47871123 - 47871175
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  47871123 gggtgcaaaatcgcacaattagcaaaagataggggg-aaaagtgcaattaagcc 47871175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 48159950 - 48159897
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  48159950 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 48159897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 53766580 - 53766633
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  53766580 gggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcc 53766633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 3644588 - 3644538
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    |||||||||||| ||||||| ||||||||||| | ||||||||||||||||    
T  3644588 gggtgcaaaattacacaattagcaaaagatagagagaaaaagtgcaattaa 3644538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 21895711 - 21895657
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatag-ggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  |||||||||||||| |||| ||||||||||||||||||||||    
T  21895711 gggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagcc 21895657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 8314066 - 8314013
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||| |||||||  |||||||||||||||||    
T  8314066 gggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 9027034 - 9027086
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  9027034 gggtgtaaaattgcacaattagcaaaagataggggg-aaaagtgaaattaagcc 9027086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 10348800 - 10348853
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||| | ||||||||||||||||||||    
T  10348800 gggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaagcc 10348853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 20968771 - 20968718
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||||||| ||| |||||||||||||    
T  20968771 gggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaagcc 20968718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 40848962 - 40849015
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||| ||| |||||||||||||||||    
T  40848962 gggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagcc 40849015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 42673030 - 42672978
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  42673030 gggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 45060872 - 45060925
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||| ||||| |||||||| ||||||||||||||  |||||||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcc 45060925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 48160334 - 48160387
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||||||||  ||||||||||||||||    
T  48160334 gggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagcc 48160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 53687941 - 53687888
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  53687941 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 53687888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 22429211 - 22429159
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    ||||||||| | ||||||||||||||| |||||||  ||||||||||||||||    
T  22429211 gggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaagc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 26007622 - 26007670
Alignment:
Q  86 gtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||| | ||||||||||||  |||||||||||||||||||||||    
T  26007622 gtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaa 26007670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 47665963 - 47665911
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| ||||||||| ||||  ||| ||||||||||||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcc 47665911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 13657622 - 13657673
Alignment:
Q  84 gggtgcaaaattgcacaattggc-aaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||||| ||||||||||||  ||||||||||||||    
T  13657622 gggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaa 13657673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 1928435 - 1928484
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| |||||||||||||||||||||| | |||| |||||||||    
T  1928435 gggtgcaaaatcgcacaattggcaaaagatagggaggaaaa-tgcaattaa 1928484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 23630036 - 23630086
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||  ||||| ||||| |||||||||||||||||    
T  23630036 gggtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaa 23630086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 26540743 - 26540694
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  26540743 gggtgcaaaattgcacaattgacaaaaaata-ggggcaaaagtgcaattaa 26540694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 27238901 - 27238951
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||||||||  |||| ||| ||||||||||||||    
T  27238901 gggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 27238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 47870876 - 47870823
Alignment:
Q  84 gggtgcaaaatt-gcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||| ||| |||| |||||||||||||| ||||||||||||||||||    
T  47870876 gggtgcaaaattcgcataattagcaaaagatagggg-aaaaagtgcaattaagcc 47870823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 53766216 - 53766166
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||| ||||  ||||| |||||||||||||||||    
T  53766216 gggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 53766166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 3353180 - 3353128
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  3353180 gggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 8315083 - 8315135
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||| ||||||||  ||||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatataggggg-gaaagtgcaattaagcc 8315135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 21896512 - 21896564
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||| ||| ||||||||| ||||||||||||    
T  21896512 gggtgcaaaatcgcacaattgacaaaatata-ggggaaaaaatgcaattaagcc 21896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 24485461 - 24485513
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||| | |||||||||||||||||    
T  24485461 gggtgcaaaatcgcacaattggcaaactatagggag-aaaagtgcaattaagcc 24485513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 27238518 - 27238465
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||||| || |||||| ||||||||||    
T  27238518 gggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagcc 27238465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 40848573 - 40848521
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||| ||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  40848573 gggtgtaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 40848521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 42455839 - 42455790
Alignment:
Q  88 gcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  42455839 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 42455790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 42673297 - 42673349
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  42673297 gggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 18875065 - 18875017
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaa-gatagggggaaaaagtgcaatt 132  Q
    |||||||||| |||||||| |||||| ||||||||| ||||||||||||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 18875017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 44008403 - 44008454
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||||||||  |||||  | |||||||||||||||||    
T  44008403 ggtgcaaaattgcacaattggcaaactataggatg-aaaagtgcaattaagcc 44008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 45060644 - 45060596
Alignment:
Q  89 caaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||| ||| |||| ||||||||||| ||| |||||||||||||||||    
T  45060644 caaaatcgcataattagcaaaagatagtggggaaaagtgcaattaagcc 45060596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 5e-30; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 41083032 - 41082909
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnnggg-tgcaaaattgcacaattggcaaaagat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||         ||| |||||||| ||||||||||||||||||    
T  41083032 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaagaggggatgcaaaatcgcacaattggcaaaagat 41082933  T
Q  114 agggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||| ||||||||||    
T  41082932 agggggaaaaagtacaattaagcc 41082909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 47955430 - 47955306
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||||||||||||    
T  47955430 cacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaaga 47955331  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  47955330 taggggggaaaagtgcaattaagcc 47955306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 22149632 - 22149750
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnngggtgcaaaattgcacaattggcaaaagata 114  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||          |||||||||| |||||||| ||||||||||    
T  22149632 cacaaagatggggtgcaaaatcagaaa-ggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaaggaggtgcaaaatcgcacaattagcaaaagata 22149730  T
Q  115 gggggaaaaagtgcaattaa 134  Q
    ||||| ||||||||||||||    
T  22149731 ggggggaaaagtgcaattaa 22149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 17518534 - 17518653
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc-aacnnnnnnnngggtgcaaaattgcacaattggcaaaagat 113  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||         ||||||||||| ||||||||||||||||||    
T  17518534 cacaaagatggggtgcaaaatcagaaagggggcaaaaagat-gggtgcaaaattgctcaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagat 17518632  T
Q  114 agggggaaaaagtgcaattaag 135  Q
    |||||| |||||||||||||||    
T  17518633 aggggg-aaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 4692434 - 4692487
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  4692434 gggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4692487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 8108994 - 8109047
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  8108994 gggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 8109047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 8108952 - 8109007
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgc 70  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  8108952 cacaaagatggggtgcaaaatcaaaaagggggcaaaaagatggggtgcaaaatcgc 8109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 1176889 - 1176839
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  1176889 gggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaa 1176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 46824279 - 46824332
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  46824279 gggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaagcc 46824332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 48190824 - 48190771
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  48190824 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 49284462 - 49284409
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  49284462 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 49284409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 31847997 - 31847898
Alignment:
Q  36 cagaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnnggg-tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    |||||||||||||||||||| ||||| ||||||||||||         ||| ||||||||||||||||| |||||||||| ||||  |||||||||||||    
T  31847997 cagaaagggggcaaaaagatcgggtgcaaaatcgctcaaaaaaaatatgggatgcaaaattgcacaattagcaaaagataagggggtaaagtgcaattaa 31847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 50526473 - 50526524
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaag 135  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  50526473 gggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 6703895 - 6703948
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||||||||  |||||||  |||||||||||||||||    
T  6703895 gggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaagcc 6703948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 9347179 - 9347126
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  9347179 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 13589660 - 13589712
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  13589660 gggtgcaaaatcgcacaattagcaaaagataggggg-aaaagtgcaattaagcc 13589712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 13918499 - 13918446
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||    
T  13918499 gggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaagcc 13918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 32163044 - 32163097
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  32163044 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32163097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 39690847 - 39690794
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||    
T  39690847 gggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagcc 39690794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 39692001 - 39692054
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||| |||||||| |||||||||||||||||    
T  39692001 gggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcc 39692054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 44911078 - 44911025
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||    
T  44911078 gggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagcc 44911025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 48191356 - 48191409
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||| ||||||||||||||||||  |||||||||||||||||    
T  48191356 gggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagcc 48191409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 48313793 - 48313846
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||| ||||||||||  |||||||||| ||||||||||    
T  48313793 gggtgcaaaattgcacaattagcaaaagataatgggaaaaagtacaattaagcc 48313846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 1177019 - 1177069
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    |||||||||||||||||||| || |||||||||| | ||||||||||||||    
T  1177019 gggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaa 1177069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 44911438 - 44911488
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||||||||  ||||||||||||| |||||||||    
T  44911438 gggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaa 44911488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 49317801 - 49317752
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  49317801 tgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 50430082 - 50430132
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||||||||||    
T  50430082 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 6002290 - 6002237
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  |||||||| |||||||||||||  |||||||||||||||||    
T  6002290 gggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 9347552 - 9347604
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||||||||  ||||||||  ||||||||||||||||    
T  9347552 gggtgcaaaattgcacaattggcaaactataggggg-gaaagtgcaattaagcc 9347604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 20371354 - 20371406
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  20371354 gggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 20480613 - 20480665
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  20480613 gggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 21687078 - 21687025
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||| |||||||| ||||  |||||||| |||||||||||||||||    
T  21687078 gggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagcc 21687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 27172168 - 27172116
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  27172168 gggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 47955609 - 47955662
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||   ||||||||||||| |||||||||||||||||    
T  47955609 gggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagcc 47955662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 48105117 - 48105170
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||| |||| |||||||||||||||||    
T  48105117 gggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 6703512 - 6703460
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| |||||||||| |||  ||||| ||||||||||||||||||||    
T  6703512 ggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaagcc 6703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 32162782 - 32162734
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaatt 132  Q
    ||||||||||||||||||||||||||  |||||  ||||||||||||||    
T  32162782 gggtgcaaaattgcacaattggcaaactataggaagaaaaagtgcaatt 32162734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 46823894 - 46823846
Alignment:
Q  86 gtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||| ||||||||||||||  |||||||| ||||||||||||||    
T  46823894 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 13918869 - 13918920
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    |||||||||| ||||||||||||||  |||||| | ||||||||||||||||    
T  13918869 ggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 47498349 - 47498301
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||||||||    
T  47498349 tgcaaaattgcacaattggcaaactataggggg--aaagtgcaattaagcc 47498301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 8108774 - 8108724
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||  |||||||||||| | ||||||||||||||    
T  8108774 gggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaa 8108724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 20371091 - 20371040
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||| ||||  ||||||||  ||||||||||||||||    
T  20371091 gggtgcaaaattgcacaattgacaaactataggggg--aaagtgcaattaagcc 20371040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 27172545 - 27172595
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||| ||||||||||||||  | |||||| |||||||||||||||||    
T  27172545 tgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaagcc 27172595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 28634158 - 28634208
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||| ||||  |||||||| ||||||||||||||    
T  28634158 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 28634208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 48104731 - 48104681
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||| ||||  |||||||| ||||||||||||||    
T  48104731 gggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 19008751 - 19008804
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||  |||  |||||||| |||||||||||||||||    
T  19008751 gggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagcc 19008804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 20480220 - 20480168
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  20480220 gggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 20480168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 26814747 - 26814694
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||| | |||||||||||||||||    
T  26814747 gggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 26814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 26815120 - 26815173
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||  |||  |||||||| |||||||||||||||||    
T  26815120 gggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcc 26815173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 28633773 - 28633720
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| | ||||||||||||  ||| |||| |||||||||||||||||    
T  28633773 gggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagcc 28633720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 31848193 - 31848246
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| | ||||||  |||||||||||||  |||||||||||||||||    
T  31848193 gggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagcc 31848246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 41083212 - 41083264
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||| |  |||||||||||||| |||||||||||||||||    
T  41083212 gggtgcaaaatcgcacaactaacaaaagataggggg-aaaagtgcaattaagcc 41083264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 42611237 - 42611188
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    |||||||||| ||||||||||||||  ||| |||| ||||||||||||||    
T  42611237 ggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 46057199 - 46057243
Alignment:
Q  89 caaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    |||||||||| |||| |||||||||| |||||||||||||||||||    
T  46057199 caaaattgcataattagcaaaagata-ggggaaaaagtgcaattaa 46057243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 50615289 - 50615240
Alignment:
Q  88 gcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 50615240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 50615622 - 50615674
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  50615622 gggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 50623117 - 50623068
Alignment:
Q  88 gcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 50623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 50623450 - 50623502
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  50623450 gggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 6002343 - 6002304
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  6002343 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 6002304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 31848067 - 31848019
Alignment:
Q  87 tgcaaaattgcacaattggcaaaa-gatagggggaaaaagtgcaattaa 134  Q
    |||||||| ||||||||||||||| ||||| ||| ||||||||||||||    
T  31848067 tgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattaa 31848019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 46056953 - 46056904
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    |||||||||| ||| |||| |||||||||||||||  |||||||||||||||    
T  46056953 ggtgcaaaatcgcaaaattagcaaaagataggggg--aaagtgcaattaagc 46056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 49284515 - 49284476
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  49284515 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 49284476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 40469659 - 40469780
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||| ||||||||    
T  40469659 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaaga 40469758  T
Q  113 tagggggaaaaagtgcaattaa 134  Q
    ||||||||||||||||||||||    
T  40469759 tagggggaaaaagtgcaattaa 40469780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 30191047 - 30190923
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||||||||||||    
T  30191047 cacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaaga 30190948  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  30190947 taggggggaaaagtgcaattaagcc 30190923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 6171387 - 6171510
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc-aacnnnnnnnngggtgcaaaattgcacaattggcaaaagat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||         |||||||||||  |||||||||||||||||    
T  6171387 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaattgctcaaaaaaaaagaggggtgcaaaatcccacaattggcaaaagat 6171486  T
Q  114 agggggaaaaagtgcaattaagcc 137  Q
    |||||| |||||||||||||||||    
T  6171487 aggggggaaaagtgcaattaagcc 6171510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 20347394 - 20347518
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnnggg--tgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| |||||| |||||         |||  |||||||| |||||||||||||||||    
T  20347394 cacaaagatggggtgcaaaatcagaaaggggacaaaaagatggggtgcaaaatccctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaaga 20347493  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  20347494 taggggggaaaagtgcaattaagcc 20347518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 32673073 - 32673193
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||| ||||||||||  ||         ||||||||||| |||||||||||||||||    
T  32673073 cacaaagatggggtgcaaaatcagaaagagggcgaaaagatggggtgcaaaatcgctcaaaaaaaaatagggggtgcaaaatcgcacaattggcaaaaga 32673172  T
Q  113 tagggggaaaaagtgcaattaa 134  Q
    || |||||||||||||||||||    
T  32673173 ta-ggggaaaaagtgcaattaa 32673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 11883747 - 11883623
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnnggg--tgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||| |||||||||||||||||| |||| ||||| ||||||         |||  |||||||| |||||||| ||||||||    
T  11883747 cacaaagatggggtgcaaaatcataaagggggcaaaaagatgaggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaaga 11883648  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  11883647 taggggggaaaagtgcaattaagcc 11883623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 26737711 - 26737835
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||  ||         ||||||||||| ||||| || ||||||||    
T  26737711 cacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgtaaaatctctcaaaaaaaaaagaggggtgcaaaatcgcacagttagcaaaaga 26737810  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||  |||||||||||||||||    
T  26737811 taggggtgaaaagtgcaattaagcc 26737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 24832432 - 24832331
Alignment:
Q  38 gaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnn--gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaag 135  Q
    |||||||||||||||||||||||| ||||||||||||           ||||||||||| |||||||| ||||||||||||||| |||||||||||||||    
T  24832432 gaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaag 24832333  T
Q  136 cc 137  Q
    ||    
T  24832332 cc 24832331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 2639483 - 2639536
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  2639483 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 2639536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 11883927 - 11883980
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  11883927 gggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 18296694 - 18296747
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  18296694 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18296747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 26841640 - 26841587
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  26841640 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 26841587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 2638873 - 2638820
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||| ||||||||||||    
T  2638873 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 2638820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 5378714 - 5378661
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  5378714 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 5378661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 17851031 - 17850978
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  17851031 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 26842239 - 26842292
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||| |||||||    
T  26842239 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 37720257 - 37720204
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  37720257 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37720204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 41790917 - 41790966
Alignment:
Q  88 gcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  41790917 gcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcc 41790966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 18296129 - 18296077
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    ||||||||||| |||||||||||||||||||||||  |||||| |||||||||    
T  18296129 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 19141496 - 19141446
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaag 135  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  19141496 gggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaag 19141446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 7591254 - 7591204
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| |||||||||||||||||||||||  |||||| |||||||    
T  7591254 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 8851201 - 8851151
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||||||||||    
T  8851201 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 15321492 - 15321394
Alignment:
Q  37 agaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnnggg--tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||| ||||||||||||||||||| ||||||||||||         |||  |||||||||||||||||  |||||||||||||  ||||||||||||||    
T  15321492 agaaatggggcaaaaagatggggtgcaaaatcgctcaaaataaaataggggatgcaaaattgcacaattaacaaaagatagggg--aaaagtgcaattaa 15321395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 18055317 - 18055367
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||| |||||| ||| ||||||||||||||||||    
T  18055317 gggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaa 18055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 5379960 - 5380013
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||| |||  |||||||| |||||||||||||||||    
T  5379960 gggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagcc 5380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 8851583 - 8851636
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  8851583 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 8851636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 30191226 - 30191279
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||   ||||||||||||| |||||||||||||||||    
T  30191226 gggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagcc 30191279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 6171207 - 6171156
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 6495723 - 6495775
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| ||||||||  |||||||||||| | |||||||||||||||||    
T  6495723 ggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaagcc 6495775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 17345784 - 17345736
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||||||| |||| ||||||||||||||  ||||||||||||||    
T  17345784 gggtgcaaaattgcataattagcaaaagatagggg--aaaagtgcaattaa 17345736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 6325349 - 6325399
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaag 135  Q
    |||||||||| ||||||||||||||  ||| |||| |||||||||||||||    
T  6325349 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaag 6325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 15321565 - 15321515
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||| |||| ||||||||||||  ||||||||||||||    
T  15321565 gggtgcaaaatcgcacagttggaaaaagataggggacaaaagtgcaattaa 15321515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 26692449 - 26692399
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||| ||||  |||| ||||||||||||||||||    
T  26692449 gggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 26692821 - 26692871
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||||||||  |||| ||| ||||||||||||||    
T  26692821 gggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 26737533 - 26737482
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||||||||| |  |||||||||||||||||    
T  26737533 gggtgcaaaatcgcacaattagcaaaagataggag--aaaagtgcaattaagcc 26737482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 7664301 - 7664248
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||  |||  |||||||| |||||||||||||||||    
T  7664301 gggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcc 7664248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 7664674 - 7664727
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||| | |||||||||||||||||    
T  7664674 gggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 7664727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 16910880 - 16910827
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  | | |||| |||||||||||||||||    
T  16910880 gggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaagcc 16910827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 20347216 - 20347163
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||| ||| ||||||| |||||||||    
T  20347216 gggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagcc 20347163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 26737657 - 26737706
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaa-gatagggggaaaaagtgcaatt 132  Q
    ||||||||||| |||||||| |||||| ||||||||| ||||||||||||    
T  26737657 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 40469480 - 40469427
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||||||||| || |||| | ||||||||||    
T  40469480 gggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaagcc 40469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 2638926 - 2638887
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  2638926 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 2638887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 2639430 - 2639469
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  2639430 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 2639469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 7591307 - 7591268
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  7591307 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 7591268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 17346037 - 17346088
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| |||||||| ||||||||||  || ||||||||||||||||||    
T  17346037 ggtgcaaaatcgcacaattagcaaaagataaagg-aaaaagtgcaattaagcc 17346088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 26841693 - 26841654
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  26841693 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 26841654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 26842186 - 26842225
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  26842186 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 26842225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 29230334 - 29230282
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||  |||||||| |||||||||| | | |||||||||||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagcc 29230282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 40221364 - 40221313
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| | |||||| ||||||||||||||| ||| |||||||||||||    
T  40221364 ggtgcaaaatcgaacaattagcaaaagataggggg-aaaggtgcaattaagcc 40221313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 40221584 - 40221624
Alignment:
Q  94 ttgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    |||||||||| |||||||||| | |||||||||||||||||    
T  40221584 ttgcacaattagcaaaagatatgaggaaaaagtgcaattaa 40221624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 7e-29; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 12281248 - 12281124
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnng--ggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||         |  |||||||||| |||||||||||||||||    
T  12281248 cacaaagatggggtgcaaaatctgaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagaggaggtgcaaaatcgcacaattggcaaaaga 12281149  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  12281148 taggggggaaaagtgcaattaagcc 12281124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 43245995 - 43245871
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctca--acnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |         ||||||||||| ||||||||  |||||||    
T  43245995 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattatcaaaaga 43245896  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  43245895 tagggggaaaaagtgcaattaagcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 765858 - 765736
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||||||||||||    
T  765858 cacaaagatggggtgcaaaatctgaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaaga 765759  T
Q  113 tagggggaaaaagtgcaattaag 135  Q
    ||||||| |||||||||||||||    
T  765758 taggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 41662344 - 41662457
Alignment:
Q  26 ggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnnggg--tgcaaaattgcacaattggcaaaagatagggggaaaa 123  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||         |||  |||||||| |||||||||||||||||||||||| |||    
T  41662344 ggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaa 41662443  T
Q  124 agtgcaattaagcc 137  Q
    ||||||||||||||    
T  41662444 agtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 15156115 - 15156239
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgct--caacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||   ||         ||||||||||| ||||||||| |||||||    
T  15156115 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaaga 15156214  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  15156215 taggggggaaaagtgcaattaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 16929064 - 16928942
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc-aacnnnnnnnngggtgcaaaattgcacaattggcaaaagat 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||         ||||||||||| |||||||| |||||||||    
T  16929064 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaa-cgctcaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagat 16928966  T
Q  114 agggggaaaaagtgcaattaagcc 137  Q
    ||||||  ||||||||||||||||    
T  16928965 agggggggaaagtgcaattaagcc 16928942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 37752238 - 37752179
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaa 74  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37752238 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaa 37752179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 74915 - 74971
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgct 71  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  74915 cacaaagatgtggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgct 74971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 9823362 - 9823415
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  9823362 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 9823415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 39724049 - 39724102
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  39724049 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 13026687 - 13026635
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 13026635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 34313994 - 34314053
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaa 74  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  34313994 cacaaagatgaggtgcaaaatcagaaaaggggcaaaaagatggggtgcaaaatcactcaa 34314053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 13027282 - 13027332
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  13027282 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 13936775 - 13936723
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  13936775 gggtgcaaaatcgcacaattggtaaaagataggggg-aaaagtgcaattaagcc 13936723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 15155936 - 15155883
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  15155936 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 15155883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 16929243 - 16929296
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||||||  |||||||||||||||||    
T  16929243 gggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 22851443 - 22851390
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| |||||||||||||  |||||||||||||||||    
T  22851443 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 24473396 - 24473343
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  |||||||||||||  ||||||||||||||||||||||||||    
T  24473396 gggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaagcc 24473343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 37752137 - 37752084
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||| |||||||| |||||||||||||||||    
T  37752137 gggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 37752417 - 37752470
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  37752417 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 43246177 - 43246230
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  ||||||| ||||||||||||||| |||||||||||||||||    
T  43246177 gggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcc 43246230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 3463896 - 3463999
Alignment:
Q  36 cagaaagggggcaaaaagatggggtgtaaaatcgctcaa--cnnnnnnnngggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaatta 133  Q
    |||||| |||| |||||||||||||| ||||||||||||  |        |||||||| || |||||||| |||||| |||||||| |||||||||||||    
T  3463896 cagaaacggggtaaaaagatggggtgcaaaatcgctcaaaacaaaggagagggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaatta 3463995  T
Q  134 agcc 137  Q
    ||||    
T  3463996 agcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 43162467 - 43162519
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaat 67  Q
    |||| |||||||||||||||||||||||||| |||||||||| |||| |||||    
T  43162467 cacaaagatggggtgcaaaatcagaaaggggacaaaaagatgaggtgcaaaat 43162519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 25438845 - 25438794
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaag 135  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||    
T  25438845 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 15444648 - 15444698
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| |||||||||| |||  |||||||||||||||||||||||    
T  15444648 gggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaa 15444698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 34498175 - 34498125
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||| ||||  |||||||||||||||||||||||    
T  34498175 gggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 9623555 - 9623502
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||| | |||||||||||||||||||    
T  9623555 gggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaagcc 9623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 9822801 - 9822748
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||  ||||||||||||  |||||||||||||||||    
T  9822801 gggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 12281427 - 12281480
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  ||||||||| |||| |||||||||||||||||    
T  12281427 gggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 12281480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 13937390 - 13937443
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||| | ||||||||| ||||| |||||||| |||||||||||||||||    
T  13937390 gggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagcc 13937443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 20861639 - 20861692
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||| |  ||||||||||||| ||||||||||||    
T  20861639 gggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaagcc 20861692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 22786892 - 22786843
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||  ||||||| | ||||||||||||||||||||||||||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaa 22786843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 23123391 - 23123338
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||| ||||| ||||||||| ||||||||||| || |||||||||||||||||    
T  23123391 gggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 34498556 - 34498609
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||  |||||||| |||||||||||||||||    
T  34498556 gggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagcc 34498609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 37396761 - 37396708
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||| ||||||  |||||||| |||||||||||||||||    
T  37396761 gggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagcc 37396708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 37397150 - 37397199
Alignment:
Q  88 gcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  37397150 gcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 41662160 - 41662107
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  ||||||||| |||||||| |||||||||||||    
T  41662160 gggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaagcc 41662107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 41662573 - 41662521
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| ||||||||||||||  ||| |||| |||||||||||||||||    
T  41662573 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcc 41662521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 3463693 - 3463654
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaa 123  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  3463693 gggtgcaaaattgcacaattaacaaaagatagggggaaaa 3463654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 6092825 - 6092777
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||| ||||||||| ||||||||||||||||||  ||||||||||||    
T  6092825 tgcaaaatcgcacaattgacaaaagatagggggaaaa--tgcaattaagcc 6092777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 9465653 - 9465607
Alignment:
Q  90 aaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||||    
T  9465653 aaaattgcacaattgacaaaagataggagg-aaaagtgcaattaagcc 9465607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 18019911 - 18019872
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaaga 54  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  18019911 cacaaagatgcggtgcaaaatcagaaagggggcaaaaaga 18019872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 33726743 - 33726696
Alignment:
Q  88 gcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaag 135  Q
    ||||||| |||||||||| |||  ||||||||||||||||||||||||    
T  33726743 gcaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaag 33726696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 37670185 - 37670243
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaa 74  Q
    |||| ||||||||||| ||||||||||||||||||||| ||| |||  ||||||||||||    
T  37670185 cacaaagatggggtgctaaatcagaaagggggcaaaaa-atgaggtacaaaatcgctcaa 37670243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 3307388 - 3307338
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||| ||||||||| |||||||||||||  |||| ||||||||||||    
T  3307388 tgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 15042198 - 15042148
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    |||||||||||  |||||||||||||||||| ||||  |||||||||||||    
T  15042198 gggtgcaaaatcacacaattggcaaaagataaggggggaaagtgcaattaa 15042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 34313816 - 34313765
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||||||  |||||||||||||||||    
T  34313816 gggtgcaaaatcgcacaattaacaaaagatagggg--aaaagtgcaattaagcc 34313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 18019964 - 18019915
Alignment:
Q  84 gggtgcaaaattgcacaatt-ggcaaaagatagggggaaaaagtgcaatt 132  Q
    ||||||||||| |||||||| || ||||||||||||| ||||||||||||    
T  18019964 gggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaatt 18019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 24473769 - 24473822
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||||||   |||||||||||||||||    
T  24473769 gggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaagcc 24473822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 43162540 - 43162588
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaatta 133  Q
    ||||||||||| |||| |||| |||||||||||||| |||||||||||||    
T  43162540 gggtgcaaaatcgcacgattgacaaaagataggggg-aaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 7127702 - 7127666
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaa 123  Q
    |||||||| |||||||| |||||||||||||||||||    
T  7127702 tgcaaaatcgcacaattagcaaaagatagggggaaaa 7127666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 7127888 - 7127936
Alignment:
Q  22 atggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgc 70  Q
    ||||| |||||||||||||| |||| |||||||| ||||| ||||||||    
T  7127888 atgggatgcaaaatcagaaaaggggtaaaaagatagggtgcaaaatcgc 7127936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 9823309 - 9823348
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  9823309 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 9823348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 13026741 - 13026702
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  13026741 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 13026702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 13027229 - 13027268
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  13027229 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 13027268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 16169225 - 16169174
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||||||||  |||||  | |||||||||||||||||    
T  16169225 ggtgcaaaattgcacaattggcaaactataggatg-aaaagtgcaattaagcc 16169174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 22851958 - 22851990
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagataggg 117  Q
    |||||||||| ||||||||||||||||||||||    
T  22851958 ggtgcaaaatcgcacaattggcaaaagataggg 22851990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 23123518 - 23123567
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaag 135  Q
    ||||||||||| |||||||| |||||||||| ||||  ||||||||||||||    
T  23123518 gggtgcaaaatcgcacaattagcaaaagataagggg--aaagtgcaattaag 23123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 39723508 - 39723469
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  39723508 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 39723469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 39723996 - 39724035
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  39723996 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 39724035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 43162285 - 43162234
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| ||||||||  ||||| |||||||| |||||||||||||||||    
T  43162285 ggtgcaaaatcgcacaattaacaaaatataggggg-aaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 7e-29; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 3403919 - 3404043
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||| ||||||||    
T  3403919 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaaga 3404018  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  3404019 taggggggaaaagtgcaattaagcc 3404043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 30388294 - 30388413
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaacnnnnnnnngggtgcaaaattgcacaattggcaaaagata 114  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||         ||||||||||| |||||||| ||||||||||    
T  30388294 cacaaagatgaggtgcaaaatcagaaagggggtaaaaagatggggtgcaaaatcgctcaaaaaaaaagggggtgcaaaatcgcacaattagcaaaagata 30388393  T
Q  115 gggggaaaaagtgcaattaa 134  Q
    |||||||||||| |||||||    
T  30388394 gggggaaaaagtacaattaa 30388413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 18242086 - 18242210
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||||||||||||    
T  18242086 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaaga 18242185  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    |||||  ||||| ||||||||||||    
T  18242186 tagggaaaaaaaatgcaattaagcc 18242210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 3403770 - 3403717
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  3403770 gggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 33829043 - 33828990
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  33829043 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 33829637 - 33829690
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  33829637 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33829690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 21032081 - 21031979
Alignment:
Q  36 cagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaatta 133  Q
    |||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||| ||||||| ||||||| |||||||||||||    
T  21032081 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagttaggggg-aaaagtgcaatta 21031983  T
Q  134 agcc 137  Q
    ||||    
T  21031982 agcc 21031979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 2762607 - 2762548
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaa 74  Q
    |||| |||||||||||||||||| |||||||||||||||||| |||| |||||| |||||    
T  2762607 cacaaagatggggtgcaaaatcaaaaagggggcaaaaagatgaggtgcaaaatcactcaa 2762548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 10039728 - 10039676
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  10039728 gggtgcaaaatcgcacaattagcaaaagataggggg-aaaagtgcaattaagcc 10039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 18241907 - 18241854
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  18241907 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 18241854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 13579589 - 13579704
Alignment:
Q  22 atggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgct-caacnnnnnnnngggtgcaaaattgcacaattggcaaaagataggggga 120  Q
    |||||||||||||| ||||||||| |||||| |||||||| |||||||||  ||         ||||||||||| |||||||| ||||| ||||||| |     
T  13579589 atggggtgcaaaataagaaaggggccaaaaaaatggggtgcaaaatcgctaaaaaaaacgagggggtgcaaaatcgcacaattagcaaacgatagggag- 13579687  T
Q  121 aaaagtgcaattaagcc 137  Q
    |||||||||||||||||    
T  13579688 aaaagtgcaattaagcc 13579704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 7654549 - 7654602
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  7654549 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 7654602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 10087859 - 10087912
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  | |||||| |||||||||||||||||    
T  10087859 gggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaagcc 10087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 11656783 - 11656836
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||||||||| |  |||||||||||||||||    
T  11656783 gggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 21032285 - 21032334
Alignment:
Q  88 gcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  21032285 gcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 21032334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 33655116 - 33655168
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||| |||||||||| |||| | |||||||||||||||    
T  33655116 gggtgcaaaattgcacaattagcaaaagataagggg-acaagtgcaattaagcc 33655168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 33974300 - 33974353
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||| ||||||||||||    
T  33974300 gggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 33974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 33658617 - 33658566
Alignment:
Q  84 gggtgcaaaattgcacaattggc-aaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||    
T  33658617 gggtgcaaaattgcacaattggcaaaaagataaagggcaaaagtgcaattaa 33658566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 3825579 - 3825530
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| |||||||| |||||| |||||||| ||||||||||||||    
T  3825579 gggtgcaaaatcgcacaattagcaaaatataggggg-aaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 30388111 - 30388062
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||| |||||||| |||||||||||||||  ||||||||||||||||    
T  30388111 tgcaaaatcgcacaattagcaaaagataggggg-gaaagtgcaattaagcc 30388062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 2762660 - 2762611
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaa-gatagggggaaaaagtgcaatt 132  Q
    ||||||||||| |||||||| |||||| ||||||||| ||||||||||||    
T  2762660 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 10039844 - 10039893
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaa-gatagggggaaaaagtgcaatt 132  Q
    ||||||||||| |||||||| |||||| ||||||||| ||||||||||||    
T  10039844 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 12714481 - 12714436
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaatt 132  Q
    |||||||| ||||||||  |||||||||||||| ||||||||||||    
T  12714481 tgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 23250644 - 23250592
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||| ||  |||||||| ||||||||||||| ||||||||||||||||||    
T  23250644 gggtgcaagatctcacaattgacaaaagatagggg-aaaaagtgcaattaagcc 23250592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 31598274 - 31598326
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||| |||||||| | ||||||||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagatagagggaaaaa-tacaattaagcc 31598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 33829096 - 33829057
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  33829096 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 33829057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 33829584 - 33829623
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  33829584 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 33829623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 7e-29; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 18433139 - 18433015
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||| ||||||||    
T  18433139 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaaga 18433040  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  18433039 taggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 25115881 - 25115757
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||         |||||||||||  ||||||||||||||||    
T  25115881 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaaga 25115782  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  25115781 taggggggaaaagtgcaattaagcc 25115757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 25174973 - 25174849
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||         |||||||||||  ||||||||||||||||    
T  25174973 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaaga 25174874  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  25174873 taggggggaaaagtgcaattaagcc 25174849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 26020574 - 26020450
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||  ||         ||||||||||| |||||||| ||||||||    
T  26020574 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatgcggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaaga 26020475  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||| | |||||||||||||||||    
T  26020474 tagggaggaaaagtgcaattaagcc 26020450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 34576989 - 34576870
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc-aacnnnnnnnngggtgcaaaattgcacaattggcaaaagat 113  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||         ||||| ||||| |||||||| |||||||||    
T  34576989 cacaaagatggggtggaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaagatggggtgtaaaatcgcacaattagcaaaagat 34576890  T
Q  114 agggggaaaaagtgcaattaa 134  Q
    ||||||  |||||||||||||    
T  34576889 aggggg-gaaagtgcaattaa 34576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 22429155 - 22429210
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgc 70  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22429155 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgc 22429210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 18817612 - 18817665
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  18817612 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 5187646 - 5187591
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgc 70  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  5187646 cacaaagatgaggtgcaaaatcagaaaggggacaaaaagatggggtgcaaaatcgc 5187591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 16726130 - 16726084
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaat 131  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||    
T  16726130 ggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 5187831 - 5187884
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||  ||||||||| |||| |||||||||||||||||    
T  5187831 gggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagcc 5187884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 12498620 - 12498567
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  12498620 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 12498567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 12498929 - 12498982
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  12498929 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 12498982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 18433317 - 18433370
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  18433317 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 18433370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 18817005 - 18816952
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||| ||||||||||||    
T  18817005 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 18816952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 22429197 - 22429249
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  22429197 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaa-tgcaattaagcc 22429249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 25116062 - 25116115
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  25116062 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 25116115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 25175152 - 25175205
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  25175152 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 25175205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 26571165 - 26571218
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  26571165 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 26571218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 33324839 - 33324892
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  |||||||| ||||||||||||| ||||||||||||||||||    
T  33324839 gggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagcc 33324892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 9665650 - 9665598
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaat 67  Q
    |||| ||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  9665650 cacaaagatgaggtgcaaaatcagaaagggagcaaaaagatggggtgcaaaat 9665598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 34147512 - 34147564
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| ||||||||| ||||  ||||||||||||||||||||||||||    
T  34147512 ggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcc 34147564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 9665608 - 9665560
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  9665608 gggtgcaaaattgcacaattagcaaaagatagggg--aaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 11351428 - 11351478
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||||||||||||||| |  ||||||||||||||    
T  11351428 gggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaa 11351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 16466746 - 16466796
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||| |||||||| |||||| |||||||| |||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 16466796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 21207279 - 21207229
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||||||||||    
T  21207279 gggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 11350860 - 11350808
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||| ||||||||||||    
T  11350860 gggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaagcc 11350808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 19514964 - 19515017
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  19514964 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 19515017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 22428986 - 22428934
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||||||||||||  ||||||||||||||||    
T  22428986 gggtgcaaaatcgcacaattagcaaaagataggggg-gaaagtgcaattaagcc 22428934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 23011131 - 23011079
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggggaaaaa-tgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 31569958 - 31569910
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagataggggg-aaaagtgcaattaa 31569910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 34577165 - 34577217
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||||    
T  34577165 gggtgcaaaatcacacaattagcaaaagata-ggggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 22729441 - 22729492
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||||||||||||    
T  22729441 gggtgcaaaatcgcacaattggcaaattataggggg-aaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 22629525 - 22629576
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagg-gggaaaaagtgcaattaa 134  Q
    |||||||||||| || ||||| ||||||||||| ||||||||||||||||||    
T  22629525 gggtgcaaaattacataattgacaaaagataggagggaaaaagtgcaattaa 22629576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 10098569 - 10098519
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  10098569 tgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaagcc 10098519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 3888292 - 3888239
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| | ||||||||||||  |||||||| ||| |||||||||||||    
T  3888292 gggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaagcc 3888239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 9665828 - 9665879
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||| |||||||||    
T  9665828 gggtgcaaaat-gcacaattagcaaaagataggggg-aaaagtggaattaagcc 9665879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 25940574 - 25940521
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  ||||||| ||||| ||||||||||||    
T  25940574 gggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaagcc 25940521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 26570782 - 26570729
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||| ||||  |||||||| ||||||| |||||||||    
T  26570782 gggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagcc 26570729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 37610254 - 37610202
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  |||||||||||||  |||||||| |||||||||||||||||    
T  37610254 gggtgcaaaatcacacaattggcaaactataggggg-aaaagtgcaattaagcc 37610202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 37780372 - 37780320
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  |||||||||||||  |||||||| |||||||||||||||||    
T  37780372 gggtgcaaaatcacacaattggcaaactataggggg-aaaagtgcaattaagcc 37780320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 41383168 - 41383220
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| |||||| |||||||| |||||| ||||||||||    
T  41383168 gggtgcaaaatcgcacaattagcaaaaaataggggg-aaaagttcaattaagcc 41383220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 12441093 - 12441042
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||||||||||   |||||||| ||| ||||||||||||||||||    
T  12441093 ggtgcaaaattgcacaattaataaaagata-gggaaaaaagtgcaattaagcc 12441042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 12441265 - 12441301
Alignment:
Q  38 gaaagggggcaaaaagatggggtgtaaaatcgctcaa 74  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  12441265 gaaagggggcaaaaatatggggtgcaaaatcgctcaa 12441301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 18817559 - 18817598
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  18817559 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 18817598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 23011261 - 23011309
Alignment:
Q  87 tgcaaaattgcacaattggc-aaaagatagggggaaaaagtgcaattaa 134  Q
    |||||||| ||||||||||| ||||||||||||| |||| |||||||||    
T  23011261 tgcaaaatcgcacaattggctaaaagatagggggcaaaattgcaattaa 23011309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 43464194 - 43464245
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  43464194 ggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagcc 43464245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 6627 - 6750
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||| ||||||||    
T  6627 cacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaaga 6726  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  6727 taggggg-aaaagtgcaattaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 6447 - 6394
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  6447 gggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 6394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 25299 - 25423
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||| ||||||||    
T  25299 cacaaagatggggtgcaaaatcagaaatggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaaga 25398  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  25399 taggggggaaaagtgcaattaagcc 25423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 45737 - 45860
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaaga 112  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||  ||         ||||||||||| |||||||||||||||||    
T  45737 cacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaaga 45836  T
Q  113 tagggggaaaaagtgcaattaagcc 137  Q
    ||||||| |||||||||||||||||    
T  45837 taggggg-aaaagtgcaattaagcc 45860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 45587 - 45537
Alignment:
Q  86 gtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||| ||||||||  |||||||||||||| |||||||||||||||||    
T  45587 gtgcaaaatcgcacaattaacaaaagataggggg-aaaagtgcaattaagcc 45537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 412045 - 411923
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgc-tcaacnnnnnnnngggtgcaaaattgcacaattggcaaaagat 113  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||| |||||||| | ||         ||||||||||| ||||||||| ||||||||    
T  412045 cacaaagatagggtgcaaaatcagaaagggggcaaaaagatagggtgcaaaatcgcttaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagat 411946  T
Q  114 agggggaaaaagtgcaattaagcc 137  Q
    ||||||  ||||||||||||||||    
T  411945 aggggg-taaagtgcaattaagcc 411923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 1605 - 1552
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatc 68  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  1605 cacaaagatggggtgcaaaatcagaaagggggcaataagatggggtgcaaaatc 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 1563 - 1511
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||||||  |||||||||||||||||| | ||||||||||||||||||||    
T  1563 gggtgcaaaatcacacaattggcaaaagata-gaggaaaaagtgcaattaagcc 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 136
Target Start/End: Original strand, 6805 - 6927
Alignment:
Q  15 cacagagatggggtgcaaaatcagaaagggggcaaaaagatgggg-tgtaaaatcgctc--aacnnnnnnnngggtgcaaaattgcacaattggcaaaag 111  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| || ||||||| ||  ||         |||||||||| |||||||||||||||||    
T  6805 cacaaagatggggtgcaaaatcagaaagggagcaaaaagatggggttgcaaaatcgttcaaaaagaaaaagtgggtgcaaaa-tgcacaattggcaaaag 6903  T
Q  112 atagggggaaaaagtgcaattaagc 136  Q
    ||||||||  |||||||||||||||    
T  6904 ataggggg-gaaagtgcaattaagc 6927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 38696 - 38749
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  38696 gggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 38749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 438983 - 438930
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  438983 gggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 439165 - 439253
Alignment:
Q  49 aaaagatggggtgtaaaatcgctcaacnnnnnnnngggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||| ||||||||||||         || |||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  439165 aaaagatggggtgcaaaatcgctcaaaaaaagaggggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagcc 439253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 183416 - 183367
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaa 134  Q
    ||||||||||| | ||||||| |||||||||||||| ||||||||||||||    
T  183416 gggtgcaaaatcgtacaattgacaaaagataggggg-aaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 183670 - 183716
Alignment:
Q  91 aaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||| |||||||| |||||| |||||||| |||||||||||||||||    
T  183670 aaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 183716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 183544 - 183592
Alignment:
Q  87 tgcaaaattgcacaattggcaaaa-gatagggggaaaaagtgcaattaa 134  Q
    |||||||| |||||||||| |||| ||||||||| ||||||||||||||    
T  183544 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaa 183592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 17158 - 17209
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  17158 ggtgcaaaattgcacaattagcaaaagataggggg-aaaagtgcaattaagcc 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 16965 - 16918
Alignment:
Q  27 gtgcaaaatcagaaagggggcaaaaagatggggtgtaaaatcgctcaa 74  Q
    |||||||||||||||||| | |||||||||||||| ||||||||||||    
T  16965 gtgcaaaatcagaaagggaggaaaaagatggggtgcaaaatcgctcaa 16918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 10062 - 10012
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaagcc 10012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 6796 - 6849
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||||||||||||||||||  |||| ||||||||||||    
T  6796 gggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 6205 - 6152
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||| ||||| |||||||| ||||||||||| ||  |||||||||||||||||    
T  6205 gggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

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Target: scaffold0328; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 6258 - 6218
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctca 73  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  6258 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctca 6218  T

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Target: scaffold0328; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 6743 - 6782
Alignment:
Q  32 aaatcagaaagggggcaaaaagatggggtgtaaaatcgctc 72  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  6743 aaatcagaaaggggg-aaaaagatggggtgcaaaatcgctc 6782  T

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Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 9958 - 9905
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||| ||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  9958 gggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 9905  T

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Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 764 - 816
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  764 gggtgcaaaatcgcacaattggcaaactata-ggggaaaaagtgcaattaagcc 816  T

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Target: scaffold0460; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 380 - 330
Alignment:
Q  87 tgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||||||| ||||||||| ||||  |||||||| |||||||||||||||||    
T  380 tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 330  T

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Target: scaffold0376 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 7507 - 7455
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||| |||| |||||||||| ||||||||||||||||||||||    
T  7507 gggtgcaaaatcgcataattagcaaaagata-ggggaaaaagtgcaattaagcc 7455  T

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Target: scaffold0376; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 7601 - 7653
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  7601 gggtacaaaatcgcacaattagcaaaagata-ggggaaaaagtgcaattaagcc 7653  T

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Target: scaffold0069 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 50508 - 50560
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  50508 gggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagcc 50560  T

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Target: scaffold0069; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 50126 - 50075
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||||||||||||| ||||  ||||||||  ||||||||||||||||    
T  50126 gggtgcaaaattgcacaattgacaaactataggggg--aaagtgcaattaagcc 50075  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 185275 - 185328
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| ||||||||||||||  |||||| | |||||||||||||||||    
T  185275 gggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcc 185328  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 205739 - 205687
Alignment:
Q  84 gggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 137  Q
    ||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||    
T  205739 gggtgcaaaatcgcacaattagcaaaagatagggagaaaaa-tgcaattaagcc 205687  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 73018 - 72967
Alignment:
Q  85 ggtgcaaaattgcacaattggcaaaagatagggggaaaaagtgcaattaagc 136  Q
    ||||||||||||||||||| ||||||||||  ||| |||| |||||||||||    
T  73018 ggtgcaaaattgcacaattagcaaaagataaaggggaaaaatgcaattaagc 72967  T

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