View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9349_low_15 (Length: 431)
Name: NF9349_low_15
Description: NF9349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9349_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 1 - 416
Target Start/End: Complemental strand, 35814355 - 35813943
Alignment:
| Q |
1 |
aatgtcatgtaacctaacaacatgaagatttgacgaatgaaccacttgctgatcaaaacctctatctagtactagtacgtgtctaatagttaacctagca |
100 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35814355 |
aatgtcatgaaacctaacaacatgaagatttgacgaatgaaccacttgctgatcaaaacctctatctagtactagtacgtgtctaatagttaacctagca |
35814256 |
T |
|
| Q |
101 |
agatgtggtctaagtctaagtcttcatttcgaaacacatag------ttcactacctggagatgatgatagttcacacttcacgcttattatggaatccc |
194 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |
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| T |
35814255 |
agatgtggtctaagtct------tcatttggaaacacatagacatagttcactacctggagatgatgattgttcac-------gcttattatggaatccc |
35814169 |
T |
|
| Q |
195 |
tatcatcaactttttcctttccaattgaagaatgggttggttattaggcata----ggcaacacagttatgcagacttttgacaattgatatgagatata |
290 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35814168 |
tatcatcaactttttcctttccaattgaagaatgggttggttattaggcatatataggcaacacagttatgcagacttttgacaattgatatgagatata |
35814069 |
T |
|
| Q |
291 |
tattccatataatttagttgtgtcacctcagtgcagcacgaccattattcatcactttctaaacaaaagaaagatagatatatctctataactcaagata |
390 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35814068 |
tattccatataatttagttgtgtcacctcagtgcagcacgaccattattcatcactttctaaacaaaagaaagatagatatatctctataactcaagata |
35813969 |
T |
|
| Q |
391 |
tggagtataactaatcacatgttagt |
416 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
35813968 |
tggagtataactaatcacatgttagt |
35813943 |
T |
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