View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9349_low_37 (Length: 324)
Name: NF9349_low_37
Description: NF9349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9349_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 307
Target Start/End: Complemental strand, 8411874 - 8411595
Alignment:
| Q |
8 |
tggtgttcaaaggtgaagattcacattgatggttggtcatggtggaaaggtttttcggtacgaatgaagtttgtgagcataacatgttagatgtagtgat |
107 |
Q |
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| T |
8411874 |
tggtgttcaaaggtgaagattcacattgatggctggtcatggtggaaaggtttttcggttggaaccaagtttgtgaacataac----------------- |
8411792 |
T |
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| Q |
108 |
aacatgttagatgtagtgatgattgcgttggaagataaggctctagaaaatggcgagaaagtaaggaacaaagaggtatgcaaggacctcaattttcgaa |
207 |
Q |
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| T |
8411791 |
---atgttagatgtagtgatgattgcgttggaagataaggctctagaaaatggcgagaaagtgaggaacaaagaggtatgcaaggacctcaattttcgaa |
8411695 |
T |
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| Q |
208 |
ttcaaggagaggagtcaagcaacactttttatgataaaactcataggataaagatggcgttgaacgtgaattggttggctagtttgtgatagatgagatt |
307 |
Q |
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| T |
8411694 |
ttcaaggagaggagtcaagcaacactttttatgataaaactcagaggataaagatggcgttgaacgtgaattggttggctagtttgtgatagatgagatt |
8411595 |
T |
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