View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9349_low_99 (Length: 212)
Name: NF9349_low_99
Description: NF9349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9349_low_99 |
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Alignment Details
Target: chr5 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 17739663 - 17739838
Alignment:
| Q |
22 |
acaaaggttgttcaaagcaatgaatcatgacattagattatgcatatatctaatccttttgcagcattaatatcttatctgccttttgtttctaacaatt |
121 |
Q |
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| T |
17739663 |
acaaaggttgttcaaagcaatgaatcatgacattagattatgcatatatctaatccttttgcagcattaatatcttatctgccttttgtttctaacaatt |
17739762 |
T |
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| Q |
122 |
aaatagcttattgaccacattatcacatggcagcatgtttggtccctgtccatgtaggtctttttgtggaaaaact |
197 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17739763 |
aaatagcttattgaccacaaaatcacatggcagcatgtttggtccctgtccatgtaggtctttttgtggaaaaact |
17739838 |
T |
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