View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9350_low_10 (Length: 299)
Name: NF9350_low_10
Description: NF9350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9350_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 18 - 290
Target Start/End: Original strand, 36952325 - 36952597
Alignment:
| Q |
18 |
gtactttcctaaggagggttcacaattgactcctccacactgttctgtagacttctactggaaagattattgccctatggtcttcaggtattcattatca |
117 |
Q |
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| T |
36952325 |
gtactttcctaaggagggttcacaattgactcctccacactgttctgtagacttctactggaaagattattgccctatggtcttcaggtattcattatca |
36952424 |
T |
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| Q |
118 |
gaataacatgtatataggttcttgatataatatgattttatgattattgtggtgtattagagttcttagtcagagttatgattataagcacatattcttt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
36952425 |
gaataacatgtatataggttcttgatataatatgattttatgattattgtggtgtattagagttcttagtcaaagttatgattataagcacatattcttt |
36952524 |
T |
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| Q |
218 |
atgtgatttcatatatttccaggaatttgagagaaatgttcaaattggatgcggccgagtacatgatgtccat |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36952525 |
atgtgatttcatatatttccaggaatttgagagaaatgttcaaattggatgcggccgagtacatgatgtccat |
36952597 |
T |
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