View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9350_low_16 (Length: 240)
Name: NF9350_low_16
Description: NF9350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9350_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 30760560 - 30760339
Alignment:
| Q |
1 |
cgtcatacaaaccatgcctccattcaccatcgcttccagccaacactcctttttcaggtctccgccgctttctgacaaatcaccatggctctcggtgttc |
100 |
Q |
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||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30760560 |
cgtcatacaaatcatgcctccattcaccatcgcttcctgccaacactcctttttcaggtctccgccgctttctgacaaatcaccatggctctcggtgttc |
30760461 |
T |
|
| Q |
101 |
aaataattgtcatcattagtgtgttcagatccttagtagttctctactcaatcctttacgtgtataaatgtgtctcggataaggtgttcttgcgggttgc |
200 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
30760460 |
aaataattgtcatcattagtgtgttcggatccttagtagttctctactcaatcctttacgtgtataaatgtgtctgggataaggtgttcttgcgggttgc |
30760361 |
T |
|
| Q |
201 |
taatgcaagtaagtgggtgaag |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
30760360 |
taatgcaagtaagtgggtgaag |
30760339 |
T |
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