View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9350_low_4 (Length: 375)
Name: NF9350_low_4
Description: NF9350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9350_low_4 |
 | |
|
| [»] chr6 (12 HSPs) |
| |
|
| [»] scaffold1207 (1 HSPs) |
| |
|
| [»] chr7 (1 HSPs) |
| |
|
| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 293; Significance: 1e-164; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 19 - 375
Target Start/End: Original strand, 11170332 - 11170688
Alignment:
| Q |
19 |
cctggtagagccgccaacaagcacaacatcatgaatgttagtcttcactatcccactatcttttatacacttttctacactctccatgcactgctcaaaa |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| |
|
|
| T |
11170332 |
cctggtagagccgccaacaagcacaacatcatgaattttactcttcactatcccactatcttctatacacttttctacactctccatgcaccggtcaaaa |
11170431 |
T |
|
| Q |
119 |
agactcttgctgagatcgtcgaaatttgcacgactaatcactgaggagaaatcttcacctttatataaacaatctatctcaatggtagtctgattattgg |
218 |
Q |
| |
|
|||||||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |
|
|
| T |
11170432 |
agactcttactgagattgtcgaaaattccacgactaatcactgaggagaaatcttcacctttatataaacaatctatctcgatgtcagtcttattattgg |
11170531 |
T |
|
| Q |
219 |
ttgaaagtgtacatttagctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactcttt |
318 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11170532 |
atgaaagtgtacattttgctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgttttctcaagaactcttt |
11170631 |
T |
|
| Q |
319 |
cacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170632 |
cacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
11170688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 19 - 375
Target Start/End: Original strand, 11209154 - 11209510
Alignment:
| Q |
19 |
cctggtagagccgccaacaagcacaacatcatgaatgttagtcttcactatcccactatcttttatacacttttctacactctccatgcactgctcaaaa |
118 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
11209154 |
cctggtagacccgccaacaagcacaacatcatgaatgttactcttcactatcccactatcttctatacacttttctacaatctccatgcactggtcaaaa |
11209253 |
T |
|
| Q |
119 |
agactcttgctgagatcgtcgaaatttgcacgactaatcactgaggagaaatcttcacctttatataaacaatctatctcaatggtagtctgattattgg |
218 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||| ||| | ||||||| ||||| || ||||||||||||||||||| ||||| | ||||| |
|
|
| T |
11209254 |
agactcttgttgagatcgtcgaactttgcacgactaatcgttgacaaaaaatctttaccttcatttaaacaatctatctcaatgttagtcgcagtattga |
11209353 |
T |
|
| Q |
219 |
ttgaaagtgtacatttagctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactcttt |
318 |
Q |
| |
|
|||||| | | ||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||| | ||| |||||||||||||| |
|
|
| T |
11209354 |
cagaaagtatcctttttgctctctcgcaagcagtcttcagcctcctaagggctcttggatttccactaatgtccattttttccttcctcaagaactcttt |
11209453 |
T |
|
| Q |
319 |
cacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11209454 |
cacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
11209510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 375
Target Start/End: Original strand, 11275716 - 11276072
Alignment:
| Q |
19 |
cctggtagagccgccaacaagcacaacatcatgaatgttagtcttcactatcccactatcttttatacacttttctacactctccatgcactgctcaaaa |
118 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| | ||||||||||| | |||| |
|
|
| T |
11275716 |
cctggtagacccgccaacaagcacaacatcatgaatgttactcttgtttatcccactatctgctatacacttttctacaatttccatgcactggtaaaaa |
11275815 |
T |
|
| Q |
119 |
agactcttgctgagatcgtcgaaatttgcacgactaatcactgaggagaaatcttcacctttatataaacaatctatctcaatggtagtctgattattgg |
218 |
Q |
| |
|
||||||||| ||||||| ||||| |||||||||||||||| |||||||||||| ||||| | |||||| ||||||||||||||||||| | ||||| |
|
|
| T |
11275816 |
agactcttgttgagatcatcgaactttgcacgactaatcaacgaggagaaatctgtaccttggtttaaacattctatctcaatggtagtctcactattga |
11275915 |
T |
|
| Q |
219 |
ttgaaagtgtacatttagctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactcttt |
318 |
Q |
| |
|
|||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
11275916 |
cagaaagtatcctttttactctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcatttttatgcttcctcaagaactcttt |
11276015 |
T |
|
| Q |
319 |
cacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11276016 |
cacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
11276072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 23 - 375
Target Start/End: Original strand, 11196489 - 11196841
Alignment:
| Q |
23 |
gtagagccgccaacaagcacaacatcatgaatgttagtcttcactatcccactatcttttatacacttttctacactctccatgcactgctcaaaaagac |
122 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| || |||| | ||||||||||| ||||||||||||| ||| |||||||||||| || || || |
|
|
| T |
11196489 |
gtagagccgccaacaaggacaacatcatgaatgctactcttgtccatcccactatcaattatacacttttccacaatctccatgcacttgtcgaagtgat |
11196588 |
T |
|
| Q |
123 |
tcttgctgagatcgtcgaaatttgcacgactaatcactgaggagaaatcttcacctttatataaacaatctatctcaatggtagtctgattattggttga |
222 |
Q |
| |
|
||||| |||| || || || ||||| ||||||||| |||| |||||||| ||||| || ||||| ||||||||||||| ||| | |||||| || |
|
|
| T |
11196589 |
tcttgttgagttcctcaaactttgcgcgactaatcgatgagtagaaatctataccttgatttaaactccctatctcaatggtggtcgtagtattggaaga |
11196688 |
T |
|
| Q |
223 |
aagtgtacatttagctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactctttcaca |
322 |
Q |
| |
|
|||| | | ||| ||| |||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||| |
|
|
| T |
11196689 |
aagtatcctttttgctttctcgcaagcagacttcaacctcctaagggctcttggatctccactaatgtcgattttatacttcctcgagaactctttcaca |
11196788 |
T |
|
| Q |
323 |
aaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
11196789 |
aaatggttcaccattgtattatcaaagtcttgtcccccaaggtgagtgtctcc |
11196841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 19 - 375
Target Start/End: Original strand, 11156032 - 11156388
Alignment:
| Q |
19 |
cctggtagagccgccaacaagcacaacatcatgaatgttagtcttcactatcccactatcttttatacacttttctacactctccatgcactgctcaaaa |
118 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||| || |||| | ||||||||||| ||||||||||||| ||| |||||||||||| || || |
|
|
| T |
11156032 |
cctggtagagccaccaacaaggacaacatcatgaatgctactcttgtccatcccactatcaattatacacttttccacaatctccatgcacttgtcgaag |
11156131 |
T |
|
| Q |
119 |
agactcttgctgagatcgtcgaaatttgcacgactaatcactgaggagaaatcttcacctttatataaacaatctatctcaatggtagtctgattattgg |
218 |
Q |
| |
|
|| ||||| |||| || || || ||||||||||||||| |||| |||||||| ||||| || ||||| ||||||| |||||| || | |||||| |
|
|
| T |
11156132 |
tgattcttgttgagttcctcaaactttgcacgactaatcgatgagtagaaatctataccttgatttaaactctctatctgaatggtggttgtaatattgg |
11156231 |
T |
|
| Q |
219 |
ttgaaagtgtacatttagctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactcttt |
318 |
Q |
| |
|
|||||| | | ||| ||| |||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||| ||| ||| ||||||| || |
|
|
| T |
11156232 |
aagaaagtatcctttttgctttctcgcaagcagacttcaacctcctaagggctcttggatctccactaatgtcgattttatacttcctcgagaactcatt |
11156331 |
T |
|
| Q |
319 |
cacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
11156332 |
cacaaaatggttcaccattgtattatcaaagtcttgtcccccaaggtgagtgtctcc |
11156388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 23 - 375
Target Start/End: Original strand, 11160903 - 11161255
Alignment:
| Q |
23 |
gtagagccgccaacaagcacaacatcatgaatgttagtcttcactatcccactatcttttatacacttttctacactctccatgcactgctcaaaaagac |
122 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||| || |||| | ||||||||||| ||||||||||||||||| |||||||||||| || || || |
|
|
| T |
11160903 |
gtagagccaccaacaaggacaacatcatgaatgctactcttgtccatcccactatcaattatacacttttctacaatctccatgcacttgtcgaagtgat |
11161002 |
T |
|
| Q |
123 |
tcttgctgagatcgtcgaaatttgcacgactaatcactgaggagaaatcttcacctttatataaacaatctatctcaatggtagtctgattattggttga |
222 |
Q |
| |
|
||||| |||| || || || ||||| ||||||||| |||| |||||||| |||| || ||||| |||||||||||||| ||| | |||||| || |
|
|
| T |
11161003 |
tcttgttgagttcctcaaactttgcgcgactaatcgatgagtagaaatctattccttgatttaaactctctatctcaatggtggtcgtagtattggaaga |
11161102 |
T |
|
| Q |
223 |
aagtgtacatttagctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactctttcaca |
322 |
Q |
| |
|
|||| | | ||| ||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||| |
|
|
| T |
11161103 |
aagtatcctttttgctttctcgcaagcagagttcaacctcctaagggctcttggatctccactaatgtcgattttatacttcctcgagaactctttcaca |
11161202 |
T |
|
| Q |
323 |
aaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
11161203 |
aaatggttcaccattgtattatcaaagtcttgtcccctaaggtgagtgtctcc |
11161255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 81 - 375
Target Start/End: Original strand, 11199712 - 11200006
Alignment:
| Q |
81 |
ttatacacttttctacactctccatgcactgctcaaaaagactcttgctgagatcgtcgaaatttgcacgactaatcactgaggagaaatcttcaccttt |
180 |
Q |
| |
|
||||||||||||||||| |||||||||||| || || | ||||| |||| || || || ||||| ||||||||| |||| |||||||| ||||| |
|
|
| T |
11199712 |
ttatacacttttctacaatctccatgcacttgtcgaagtcattcttgttgagttcctcaaactttgcgcgactaatcgatgagtagaaatctaaaccttg |
11199811 |
T |
|
| Q |
181 |
atataaacaatctatctcaatggtagtctgattattggttgaaagtgtacatttagctctctcgcaagcagtcttcagcctcctaatggctcttggatct |
280 |
Q |
| |
|
|| ||||| |||||||||||||| ||| | |||||| |||||| | | ||| ||| |||||||||||| |||| |||||||| ||||||||||||| |
|
|
| T |
11199812 |
atttaaactctctatctcaatggtggtcgtagtattggaagaaagtatcctttttgctttctcgcaagcagacttctacctcctaagggctcttggatct |
11199911 |
T |
|
| Q |
281 |
ccactaatgtcgagtttatgctttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
||||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
11199912 |
ccactaatgtcgattttatacttcctcgagaactctttcacaaaatggttcaccattgtattatcaaagtcttgtcccccaaggtgagtgtctcc |
11200006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 24 - 336
Target Start/End: Complemental strand, 11241824 - 11241511
Alignment:
| Q |
24 |
tagagccgccaacaagcacaacatcatgaatgttagtcttcactatcccactatcttttatacacttttctacactctccatgcactgctcaaaaagact |
123 |
Q |
| |
|
||||||| |||||||| ||||||||||||||| || |||| | ||||||||||| ||||||||||||| ||| |||||||||||| || || || | |
|
|
| T |
11241824 |
tagagccaccaacaaggacaacatcatgaatgctactcttgtccatcccactatcaattatacacttttccacaatctccatgcacttgtcgaagtgatt |
11241725 |
T |
|
| Q |
124 |
cttgctgagatcgtcgaaatttgcacgactaatcactgaggagaaatcttcacctttatataaacaatctatctcaatggtagtctgattattggttgaa |
223 |
Q |
| |
|
|||| |||| || || || ||||| ||||||||| |||| |||||||| ||||| || ||||| |||||||||||||| ||| | |||||| || |
|
|
| T |
11241724 |
cttgttgagttcctcaaactttgcgcgactaatcgatgagtagaaatctataccttgatttaaactctctatctcaatggtggtcgtagtattggaataa |
11241625 |
T |
|
| Q |
224 |
agtgtacattta-gctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactctttcaca |
322 |
Q |
| |
|
||| | | ||| ||| |||||||||||| ||||| |||||||| |||||||||||||| ||||||||||| ||||| ||| ||| |||||||||||||| |
|
|
| T |
11241624 |
agtatccttttttgctttctcgcaagcagacttcaacctcctaagggctcttggatctctactaatgtcgattttatacttcctcgagaactctttcaca |
11241525 |
T |
|
| Q |
323 |
aaatggttcaccat |
336 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
11241524 |
aaatggttcaccat |
11241511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 11133000 - 11133112
Alignment:
| Q |
263 |
ctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccga |
362 |
Q |
| |
|
|||| |||| || |||||||||||||||| | ||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
11133000 |
ctaagggcttttcgatctccactaatgtcaattttatgcttcctcaagaactctttcacgaaatggttcaccattgtgttatcaaagtcttgtcccccga |
11133099 |
T |
|
| Q |
363 |
ggtgagtgtctcc |
375 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
11133100 |
ggtgagtatctcc |
11133112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 204
Target Start/End: Original strand, 11199479 - 11199660
Alignment:
| Q |
23 |
gtagagccgccaacaagcacaacatcatgaatgttagtcttcactatcccactatcttttatacacttttctacactctccatgcactgctcaaaaagac |
122 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||| || |||| | ||||||||||| ||||||||||||||||| |||||||||||| || || || |
|
|
| T |
11199479 |
gtagagccaccaacaaggacaacatcatgaatgctactcttgtccatcccactatcaattatacacttttctacaatctccatgcacttgtcgaagtgat |
11199578 |
T |
|
| Q |
123 |
tcttgctgagatcgtcgaaatttgcacgactaatcactgaggagaaatcttcacctttatataaacaatctatctcaatggt |
204 |
Q |
| |
|
||||| |||| || || || ||||| ||||||||| |||| |||||||| ||||| || ||||| |||||||||||||| |
|
|
| T |
11199579 |
tcttgttgagttcctcaaactttgcgcgactaatcgatgagtagaaatctataccttgatttaaactctctatctcaatggt |
11199660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 11315135 - 11315048
Alignment:
| Q |
23 |
gtagagccgccaacaagcacaacatcatgaatgttagtcttcactatcccactatcttttatacacttttctacactctccatgcact |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | |||| || ||||||||||| | || ||||||||||||| ||| |||||||| |
|
|
| T |
11315135 |
gtagagccgccaacaagcacaacatcatgaatgtcactcttgaccatcccactatcctctagacacttttctacaatcttcatgcact |
11315048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 375
Target Start/End: Complemental strand, 11314927 - 11314783
Alignment:
| Q |
231 |
atttagctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactctttcacaaaatggtt |
330 |
Q |
| |
|
|||| ||| |||||||||| | ||||| |||||||| || | || ||||||||||||||| | ||||| | | || |||| ||| |||||||| || |
|
|
| T |
11314927 |
attttgctttctcgcaagctgacttcaacctcctaagggatgttaaatctccactaatgtctattttatacctcttccggaacacttccacaaaatattt |
11314828 |
T |
|
| Q |
331 |
caccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
|||||||| ||||| |||||||||||||| |||||||||||||| |
|
|
| T |
11314827 |
caccattgtattattgaagtcttgtcccccaaggtgagtgtctcc |
11314783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 23 - 375
Target Start/End: Original strand, 654 - 1006
Alignment:
| Q |
23 |
gtagagccgccaacaagcacaacatcatgaatgttagtcttcactatcccactatcttttatacacttttctacactctccatgcactgctcaaaaagac |
122 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||| |||| ||||||||||||| |||||| ||||||||||||||||||||||| | |||||||| |
|
|
| T |
654 |
gtagagccgccaacaaggacaacatcatgaaagttactcttgtttatcccactatctgctatacagttttctacactctccatgcactggttaaaaagac |
753 |
T |
|
| Q |
123 |
tcttgctgagatcgtcgaaatttgcacgactaatcactgaggagaaatcttcacctttatataaacaatctatctcaatggtagtctgattattggttga |
222 |
Q |
| |
|
||||| ||||||| || || ||||||||||||||| |||||||||| | ||||| | |||||| ||||||||||||||||||| | ||||| || |
|
|
| T |
754 |
tcttgttgagatcatcaaactttgcacgactaatcgacgaggagaaatttgtaccttggtttaaacactctatctcaatggtagtctaagtattgacaga |
853 |
T |
|
| Q |
223 |
aagtgtacatttagctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactctttcaca |
322 |
Q |
| |
|
|||| | | ||| | |||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| || |||||| |||||||| |
|
|
| T |
854 |
aagtatcctttttgatctctcacaagcagtcttcagcctcctaacggctcttggatctccactaatgtcgattttatacttccttaagaacactttcaca |
953 |
T |
|
| Q |
323 |
aaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||| ||||||||||||||| |
|
|
| T |
954 |
aaatggttcaccattgcgttatcaaagtcttgccccctgaggtgagtgtctcc |
1006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 375
Target Start/End: Original strand, 8581663 - 8581818
Alignment:
| Q |
220 |
tgaaagtgtacatttagctctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactctttc |
319 |
Q |
| |
|
||||||||| | ||| |||||||| ||||||||| ||| ||| ||||||||| |||||| |||| |||| || |||||| |||||| |||||| | |
|
|
| T |
8581663 |
tgaaagtgtccttttcgctctctcacaagcagtcctcaaccttctaatggcttttggatttccaataatctcctctttatgttttctcttgaactccgac |
8581762 |
T |
|
| Q |
320 |
acaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
||||| || ||||||||| |||||||| |||| || || |||||||||||||| |
|
|
| T |
8581763 |
acaaagtgattcaccattctgttatcaaaatcttcccctcccaggtgagtgtctcc |
8581818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 12528558 - 12528622
Alignment:
| Q |
311 |
aactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
375 |
Q |
| |
|
|||||||||||||| || ||||||||| |||||||||||| | ||| || |||||||||||||| |
|
|
| T |
12528558 |
aactctttcacaaagtgattcaccattcgattatcaaagtcctctcctccaaggtgagtgtctcc |
12528622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 371
Target Start/End: Original strand, 7542208 - 7542340
Alignment:
| Q |
239 |
ctctcgcaagcagtcttcagcctcctaatggctcttggatctccactaatgtcgagtttatgctttctcaagaactctttcacaaaatggttcaccattg |
338 |
Q |
| |
|
||||| |||||||| ||| |||||| | |||| |||||| ||||||||||| | ||| | ||||||| |||||||| ||||| | |||| ||||| |
|
|
| T |
7542208 |
ctctcacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttctttctcttgaactcttgtacaaagtagttcgccattc |
7542307 |
T |
|
| Q |
339 |
cattatcaaagtcttgtcccccgaggtgagtgt |
371 |
Q |
| |
|
|||||||||||||| ||| || |||||||||| |
|
|
| T |
7542308 |
tattatcaaagtcttctccaccaaggtgagtgt |
7542340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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