View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9351_high_5 (Length: 275)
Name: NF9351_high_5
Description: NF9351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9351_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 32680137 - 32680350
Alignment:
| Q |
9 |
ggttagataatcaatataacccccttatgtaggattcaaacttaagaggatccaaatccgattaacacgaattatcatgaagccttgagttaatttaatt |
108 |
Q |
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| T |
32680137 |
ggttagataatcaatataacccccttatgtaggattcaaacttaagaggatccaaatccgattaacaagaattatcatgaagccttgagttaatttaatt |
32680236 |
T |
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| Q |
109 |
taatcatcaatcaccccttattcttgaag------cagaaccagaaccattgtctctttggggatgaactctccgatacctgccatggaaaggccaaaga |
202 |
Q |
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| T |
32680237 |
taatcatcaatcaccccttattcttgaagcagaaccagaaccagaaccattgtctctttggggatgaactctccgatacctgccatggaaaggccaaaga |
32680336 |
T |
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| Q |
203 |
gacgaaattcttgt |
216 |
Q |
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|||||||||||||| |
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| T |
32680337 |
gacgaaattcttgt |
32680350 |
T |
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