View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9351_low_19 (Length: 257)
Name: NF9351_low_19
Description: NF9351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9351_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 39037749 - 39037523
Alignment:
| Q |
18 |
aatcttaataaaacttataataacctcgtactaattataaagtttacttgaattgaactcaacatctattttgagaatgaaagtccaactaagttttatc |
117 |
Q |
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| T |
39037749 |
aatcttaataaaacttataataacctcgtactaattataaagtttacttgaattgaactcaacatctattttgagaatgaaagtccaactaagttttatc |
39037650 |
T |
|
| Q |
118 |
catacacatgtcttaaggaatcaaactggaactttataatatgctttgaaaaagttaatatatagtttgatgcatatatatt-ttttaaaattaaatgac |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
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| T |
39037649 |
catacacatgtcttaaggaatcaaactggaactttataatatgctttgaaaaagttaatatatagtttgatgcatatatatttttttaaaattaaacgac |
39037550 |
T |
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| Q |
217 |
ttcaatcctatgaaagcacacactagt |
243 |
Q |
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||||||||||||||||||||||||||| |
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| T |
39037549 |
ttcaatcctatgaaagcacacactagt |
39037523 |
T |
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