View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9351_low_34 (Length: 215)
Name: NF9351_low_34
Description: NF9351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9351_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 11 - 198
Target Start/End: Original strand, 19506618 - 19506805
Alignment:
| Q |
11 |
ttggtgttggggggtgcattcttagagtttccttaactactgcttgaagataaggtaagtttggtatatcagattctttgaaaagcctttctttgccaac |
110 |
Q |
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| T |
19506618 |
ttggtgttggggggtgcattcttagagtttccttaactactgcttgaagataaggtaagtttggtatatcagattctttgaaaagcctttctttgccaac |
19506717 |
T |
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| Q |
111 |
aattgagtcaatctcttctcttgctttcttgaaaacatgtgggtttcttattagttctgctagtgcccattctaatacacttgctggt |
198 |
Q |
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| T |
19506718 |
agttgagtcaatctcttctcttgctttcttgaaaacatgtggatttcttattagttctgctagtgcccattctaatacacttgctggt |
19506805 |
T |
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